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Mukherjee D, Chakraborty G, Hasan MN, Pal U, Singh P, Rakshit T, Alsantali RI, Saha Dasgupta T, Ahmed S, Das R, Pal SK. Reversible photoswitching of spiropyran in biomolecular interfaces: A combined spectroscopy and computational study. J Photochem Photobiol A Chem 2022. [DOI: 10.1016/j.jphotochem.2022.113958] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Patel AY, Jonnalagadda KS, Paradis N, Vaden TD, Wu C, Caputo GA. Effects of Ionic Liquids on Metalloproteins. Molecules 2021; 26:514. [PMID: 33478102 PMCID: PMC7835893 DOI: 10.3390/molecules26020514] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2020] [Revised: 01/04/2021] [Accepted: 01/08/2021] [Indexed: 01/28/2023] Open
Abstract
In the past decade, innovative protein therapies and bio-similar industries have grown rapidly. Additionally, ionic liquids (ILs) have been an area of great interest and rapid development in industrial processes over a similar timeline. Therefore, there is a pressing need to understand the structure and function of proteins in novel environments with ILs. Understanding the short-term and long-term stability of protein molecules in IL formulations will be key to using ILs for protein technologies. Similarly, ILs have been investigated as part of therapeutic delivery systems and implicated in numerous studies in which ILs impact the activity and/or stability of protein molecules. Notably, many of the proteins used in industrial applications are involved in redox chemistry, and thus often contain metal ions or metal-associated cofactors. In this review article, we focus on the current understanding of protein structure-function relationship in the presence of ILs, specifically focusing on the effect of ILs on metal containing proteins.
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Affiliation(s)
- Aashka Y. Patel
- Department of Chemistry and Biochemistry, Rowan University, Glassboro, NJ 08028, USA; (A.Y.P.); (N.P.); (T.D.V.); (C.W.)
| | | | - Nicholas Paradis
- Department of Chemistry and Biochemistry, Rowan University, Glassboro, NJ 08028, USA; (A.Y.P.); (N.P.); (T.D.V.); (C.W.)
| | - Timothy D. Vaden
- Department of Chemistry and Biochemistry, Rowan University, Glassboro, NJ 08028, USA; (A.Y.P.); (N.P.); (T.D.V.); (C.W.)
| | - Chun Wu
- Department of Chemistry and Biochemistry, Rowan University, Glassboro, NJ 08028, USA; (A.Y.P.); (N.P.); (T.D.V.); (C.W.)
- Department of Molecular and Cellular Biosciences, Rowan University, Glassboro, NJ 08028, USA
| | - Gregory A. Caputo
- Department of Chemistry and Biochemistry, Rowan University, Glassboro, NJ 08028, USA; (A.Y.P.); (N.P.); (T.D.V.); (C.W.)
- Department of Molecular and Cellular Biosciences, Rowan University, Glassboro, NJ 08028, USA
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Zuccarello L, Berthomieu C, Boussac A, Brubach JB, Díaz-Moreno I, Díaz Quintana AJ, Hienerwadel R. Protonation of the Cysteine Axial Ligand Investigated in His/Cys c-Type Cytochrome by UV-Vis and Mid- and Far-IR Spectroscopy. J Phys Chem Lett 2020; 11:4198-4205. [PMID: 32364390 DOI: 10.1021/acs.jpclett.0c01016] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
His/Cys coordination was recently found in several c-type cytochromes, which could act as sensors, in electron transport or in regulation. Toward a better understanding of Cys function and reactivity in these cytochromes, we compare cytochrome c6 (c6wt) from the cyanobacterium Nostoc PCC 7120 with its Met58Cys mutant. We probe the axial ligands and heme properties by combining visible and mid- to far-FTIR difference spectroscopies. Cys58 determines the strong negative redox potential and pH dependence of M58C (EmM58C = -375 mV, versus Emc6wt = +339 mV). Mid-IR (notably Cys ν(SH), His ν(C5N1), heme δ(CmH)) and far-IR (ν(Fe(II)-His), ν(His-Fe(III)-Cys)) markers of the heme and ligands show that Cys58 remains a strong thiolate ligand of reduced Met58Cys at alkaline pH, while it is protonated at pH 7.5, is stabilized by a strong hydrogen bonding interaction, and weakly interacts with Fe(II). These data provide a benchmark for further analysis of c-type cytochromes with natural His/Cys coordination.
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Affiliation(s)
- Lidia Zuccarello
- CEA, CNRS, Aix Marseille Univ., BIAM, Interactions Protéine Métal UMR 7265, 13108 Saint Paul-Lez-Durance, France
- Aix Marseille Univ., CEA, CNRS, BIAM, Luminy Genetics and Biophysic of Plants, UMR 7265, 13288 Marseille Cedex, France
| | - Catherine Berthomieu
- CEA, CNRS, Aix Marseille Univ., BIAM, Interactions Protéine Métal UMR 7265, 13108 Saint Paul-Lez-Durance, France
| | - Alain Boussac
- I2BC, UMR CNRS 9198, CEA Saclay, 91191 Gif-sur-Yvette, France
| | - Jean-Blaise Brubach
- Synchrotron SOLEIL, AILES Beamline, L'Orme des Merisier, Saint-Aubin, BP 48, F-91192 Gif-sur-Yvette Cedex, France
| | - Irene Díaz-Moreno
- Instituto de Investigaciones Químicas (IIQ), Centro de Investigaciones Científicas Isla de la Cartuja (cicCartuja), Universidad de Sevilla - Consejo Superior de Investigaciones Científicas (CSIC), Avda. Américo Vespucio 49, Sevilla 41092, Spain
| | - Antonio J Díaz Quintana
- Instituto de Investigaciones Químicas (IIQ), Centro de Investigaciones Científicas Isla de la Cartuja (cicCartuja), Universidad de Sevilla - Consejo Superior de Investigaciones Científicas (CSIC), Avda. Américo Vespucio 49, Sevilla 41092, Spain
| | - Rainer Hienerwadel
- Aix Marseille Univ., CEA, CNRS, BIAM, Luminy Genetics and Biophysic of Plants, UMR 7265, 13288 Marseille Cedex, France
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John CW, Hausinger RP, Proshlyakov DA. Structural Origin of the Large Redox-Linked Reorganization in the 2-Oxoglutarate Dependent Oxygenase, TauD. J Am Chem Soc 2019; 141:15318-15326. [PMID: 31475523 PMCID: PMC7092798 DOI: 10.1021/jacs.9b07493] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
2-Oxoglutarate (2OG)-dependent oxygenases catalyze a wide range of chemical transformations via C-H bond activation. Prior studies raised the question of whether substrate hydroxylation by these enzymes occurs via a hydroxyl rebound or alkoxide mechanism and highlighted the need to understand the thermodynamic properties of transient intermediates. A recent spectroelectrochemical investigation of the 2OG-dependent oxygenase, taurine hydroxylase (TauD), revealed a strong link between the redox potential of the Fe(II)/Fe(III) couple and conformational changes of the enzyme. In this study, we show that the redox potential of wild-type TauD varies by 468 mV between the reduction of 2OG-Fe(III)-TauD (-272 mV) and oxidation of 2OG-Fe(II)-TauD (+196 mV). We use active site variants to investigate the structural origin of the redox-linked reorganization and the contributions of the metal-bound residues to the dynamic tuning of the redox potential of TauD. Time-dependent redox titrations show that reorganization occurs as a multistep process. Transient optical absorption and infrared spectroelectrochemistry show that substitution of any metal ligand alters the kinetics and thermodynamics of the reorganization. The H99A variant shows the largest net redox change relative to the wild-type protein, suggesting that redox-coupled protonation of H99 is required for high redox potentials of the metal. The D101Q and H255Q variants also suppress the conformational change, supporting their involvement in the structural rearrangement. Similar redox-linked conformational changes are observed in another 2OG dependent oxygenase, ethylene-forming enzyme, indicating that dynamic structural flexibility and the associated thermodynamic tuning may be a common phenomenon in this family of enzymes.
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Affiliation(s)
- Christopher W. John
- Department of Chemistry, Michigan State University, East Lansing, Michigan 48824, United States
| | - Robert P. Hausinger
- Department of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan 48824, United States
- Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824, United States
| | - Denis A. Proshlyakov
- Department of Chemistry, Michigan State University, East Lansing, Michigan 48824, United States
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John CW, Proshlyakov DA. Fourier Transform Infrared Spectrovoltammetry and Quantitative Modeling of Analytes in Kinetically Constrained Redox Mixtures. Anal Chem 2019; 91:9563-9570. [PMID: 31257856 DOI: 10.1021/acs.analchem.9b00859] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Redox-active analytes that do not support direct electron transfer on the electrode, such as proteins with buried redox centers, pose challenges to characterization of their structural and thermodynamic properties. Investigations of indirect transitions in analytes supported by complex redox mixtures require a careful balance between kinetic limitations and spectral interference from the mediators. Using methylene green and thionine acetate as redox mediators and myoglobin as the analyte, we demonstrate that normal pulse spectrovoltammetry (NPSV) with Fourier transform infrared (FT-IR) detection and subsequent global spectral regression analysis can resolve structural and thermodynamic properties simultaneously with little a priori information. Both the E1/2 and unbiased redox difference FT-IR spectra of the Fe(II)/Fe(III) redox couple of myoglobin in reduction and oxidation NPSV modes were in good agreement with those reported earlier by independent techniques. The thermodynamic and kinetic limitations of mediators/analyte interactions were investigated using comprehensive semiempirical kinetic simulation models. This modeling effort yielded a flexible computational tool capable of quantitatively predicting the redox response in mediated electrochemical studies and defining its limitations, thus greatly expanding the range and precision of the formal mediator/analyte concentration ratio rule.
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Affiliation(s)
- Christopher W John
- Department of Chemistry , Michigan State University , East Lansing , Michigan 48824 , United States
| | - Denis A Proshlyakov
- Department of Chemistry , Michigan State University , East Lansing , Michigan 48824 , United States
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de Souza TP, Abreu DS, Carepo MSP, Silva MAS, Zampieri D, Eberlin MN, Paulo TF, Sousa EHS, Longhinotti E, Diógenes ICN. Effect of Crotalus basiliscus snake venom on the redox reaction of myoglobin. J Biol Inorg Chem 2019; 24:171-178. [PMID: 30673877 DOI: 10.1007/s00775-019-01636-7] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2018] [Accepted: 01/11/2019] [Indexed: 11/30/2022]
Abstract
In this work, we have studied the effect of Crotalus basiliscus snake venom on the redox reaction of myoglobin (Mb), and by means of electrochemical techniques, we have shown that this reaction is undoubtedly affected following the interaction with the venom. Surface plasmon resonance, electrophoresis, UV-Vis, and circular dichroism showed that the interaction involves the attachment of some constituent of the venom to the protein, although not affecting its first and secondary structures. Mass spectra support this suggestion by showing the appearance of signals assigned to the Mb dimer and to a new species resulting from the interaction between Mb and the venom proteins. In addition, the mass spectra suggest the aromatic amino acids of myoglobin, mainly tryptophan and phenylalanine, are more exposed to the solvent medium upon the exposure to the venom solution. The results altogether indicate that the harmful effects of the venom of Crotalus basiliscus snake are likely connected to the blocking of the redox site of Mb.
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Affiliation(s)
- Ticyano P de Souza
- Departamento de Química Orgânica e Inorgânica, Universidade Federal do Ceará, Fortaleza, Ceara, 60455-760, Brazil
| | - Dieric S Abreu
- Departamento de Química Orgânica e Inorgânica, Universidade Federal do Ceará, Fortaleza, Ceara, 60455-760, Brazil.,Departamento de Física, Universidade Federal do Ceará, Fortaleza, Ceara, 60455-970, Brazil
| | - Marta S P Carepo
- Departamento de Química Orgânica e Inorgânica, Universidade Federal do Ceará, Fortaleza, Ceara, 60455-760, Brazil.,LAQV, REQUIMTE, Departamento de Química, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Caparica, Portugal
| | - Maria A S Silva
- Departamento de Química Orgânica e Inorgânica, Universidade Federal do Ceará, Fortaleza, Ceara, 60455-760, Brazil
| | - Dávila Zampieri
- Departamento de Química Orgânica e Inorgânica, Universidade Federal do Ceará, Fortaleza, Ceara, 60455-760, Brazil.,ThoMSon Mass Spectrometry Laboratory, Institute of Chemistry, University of Campinas, Campinas, São Paulo, 13083-970, Brazil
| | - Marcos N Eberlin
- ThoMSon Mass Spectrometry Laboratory, Institute of Chemistry, University of Campinas, Campinas, São Paulo, 13083-970, Brazil
| | - Tércio F Paulo
- Departamento de Química Orgânica e Inorgânica, Universidade Federal do Ceará, Fortaleza, Ceara, 60455-760, Brazil
| | - Eduardo H S Sousa
- Departamento de Química Orgânica e Inorgânica, Universidade Federal do Ceará, Fortaleza, Ceara, 60455-760, Brazil
| | - Elisane Longhinotti
- Departamento de Química Analítica e Físico-Química, Universidade Federal do Ceará, Fortaleza, Ceara, 60455-760, Brazil
| | - Izaura C N Diógenes
- Departamento de Química Orgânica e Inorgânica, Universidade Federal do Ceará, Fortaleza, Ceara, 60455-760, Brazil.
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Protein-alginate complexes as pH-/ion-sensitive carriers of proteins. Int J Pharm 2018; 535:452-461. [DOI: 10.1016/j.ijpharm.2017.11.039] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2017] [Revised: 11/08/2017] [Accepted: 11/19/2017] [Indexed: 11/24/2022]
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An amperometric H 2O 2 biosensor based on hemoglobin nanoparticles immobilized on to a gold electrode. Biosci Rep 2017; 37:BSR20170194. [PMID: 28550154 PMCID: PMC5518533 DOI: 10.1042/bsr20170194] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2017] [Revised: 05/20/2017] [Accepted: 05/26/2017] [Indexed: 01/10/2023] Open
Abstract
The nanoparticles (NPs) of hemoglobin (Hb) were prepared by desolvation method and characterized by transmission electron microscopy (TEM), UV spectroscopy and Fourier-transform IR (FTIR) spectroscopy. An amperometric H2O2 biosensor was constructed by immobilizing HbNPs covalently on to a polycrystalline Au electrode (AuE). HbNPs/AuE were characterized by scanning electron microscopy (SEM), cyclic voltammetry (CV) and electrochemical impedance spectra (EIS) before and after immobilization of HbNPs. The HbNPs/AuE showed optimum response within 2.5 s at pH 6.5 in 0.1 M sodium phosphate buffer (PB) containing 100 μM H2O2 at 30°C, when operated at –0.2 V against Ag/AgCl. The HbNPs/AuE exhibited Vmax of 5.161 ± 0.1 μA cm−2 with apparent Michaelis-Menten constant (Km) of 0.1 ± 0.01 mM. The biosensor showed lower detection limit (1.0 μM), high sensitivity (129 ± 0.25 μA cm−2 mM−1) and wider linear range (1.0–1200 μM) for H2O2 as compared with earlier biosensors. The analytical recoveries of added H2O2 in serum (0.5 and 1.0 μM) were 97.77 and 98.01% respectively, within and between batch coefficients of variation (CV) were 3.16 and 3.36% respectively. There was a good correlation between sera H2O2 values obtained by standard enzymic colorimetric method and the present biosensor (correlation coefficient, R2 =0.99). The biosensor measured H2O2 level in sera of apparently healthy subjects and persons suffering from diabetes type II. The HbNPs/AuE lost 10% of its initial activity after 90 days of regular use, when stored dry at 4°C.
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Paciello A, Amalfitano G, Garziano A, Urciuolo F, Netti PA. Hemoglobin-Conjugated Gelatin Microsphere as a Smart Oxygen Releasing Biomaterial. Adv Healthc Mater 2016; 5:2655-2666. [PMID: 27594116 DOI: 10.1002/adhm.201600559] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2016] [Revised: 07/28/2016] [Indexed: 12/12/2022]
Abstract
In this study, a novel micrometric biomaterial acting as a cyclic oxygen releasing system is designed. Human hemoglobin (Hb) is conjugated to the surface of gelatin microspheres (GM) to produce gelatin hemoglobin oxygen depot (G-HbOD). G-HbOD is obtained by means of two different conjugation strategies. The degree of conjugation of GM surfaces in terms of free amino groups by using HPLC is first evaluated. By following the strategy A (G-HbOD_A), Hb is conjugated to GM by means of the formation of a polyurethane linker. In the strategy B (G-HbOD_B) the conjugation occurs via amide bound formation. Physical and morphological differences between G-HbOD_A and G-HbOD_B are investigated by means of Fourier Transform Infrared Spectroscopy (FTIR), Inductively Coupled Plasma Optical Emission Spectroscopy (ICP-OES), Scanning Electron Microscopy (SEM) and Atomic Force Microscopy (AFM). Differences in oxygen uptake/release kinetics are found depending on the conjugation strategy and it is proved that G-HbOD works under repeated cycles in microfluidic chip. Moreover, G-HbOD is also able to work as oxygen depot in the early stages of 3D cell cultures.
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Affiliation(s)
- Antonio Paciello
- Center for Advanced Biomaterials for Health Care@CRIB Istituto Italiano di Tecnologia; Largo Barsanti e Matteucci n. 53 80125 Napoli Italy
- Interdisciplinary Research Centre on Biomaterials (CRIB); University of Naples Federico II; P.le Tecchio 80 80125 Napoli Italy
| | - Giuseppe Amalfitano
- Center for Advanced Biomaterials for Health Care@CRIB Istituto Italiano di Tecnologia; Largo Barsanti e Matteucci n. 53 80125 Napoli Italy
- Interdisciplinary Research Centre on Biomaterials (CRIB); University of Naples Federico II; P.le Tecchio 80 80125 Napoli Italy
| | - Alessandro Garziano
- Center for Advanced Biomaterials for Health Care@CRIB Istituto Italiano di Tecnologia; Largo Barsanti e Matteucci n. 53 80125 Napoli Italy
- Interdisciplinary Research Centre on Biomaterials (CRIB); University of Naples Federico II; P.le Tecchio 80 80125 Napoli Italy
| | - Francesco Urciuolo
- Center for Advanced Biomaterials for Health Care@CRIB Istituto Italiano di Tecnologia; Largo Barsanti e Matteucci n. 53 80125 Napoli Italy
| | - Paolo A. Netti
- Center for Advanced Biomaterials for Health Care@CRIB Istituto Italiano di Tecnologia; Largo Barsanti e Matteucci n. 53 80125 Napoli Italy
- Interdisciplinary Research Centre on Biomaterials (CRIB); University of Naples Federico II; P.le Tecchio 80 80125 Napoli Italy
- Department of Chemical; Materials and Industrial Production Engineering (DICMAPI); University of Napoli Federico II; P.le Tecchio 80 80125 Napoli Italy
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Raichlin S, Pecht I, Sheves M, Cahen D. Protein Electronic Conductors: Hemin-Substrate Bonding Dictates Transport Mechanism and Efficiency across Myoglobin. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201505951] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Raichlin S, Pecht I, Sheves M, Cahen D. Protein Electronic Conductors: Hemin-Substrate Bonding Dictates Transport Mechanism and Efficiency across Myoglobin. Angew Chem Int Ed Engl 2015; 54:12379-83. [DOI: 10.1002/anie.201505951] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2015] [Indexed: 11/09/2022]
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Sezer M, Kielb P, Kuhlmann U, Mohrmann H, Schulz C, Heinrich D, Schlesinger R, Heberle J, Weidinger IM. Surface Enhanced Resonance Raman Spectroscopy Reveals Potential Induced Redox and Conformational Changes of Cytochrome c Oxidase on Electrodes. J Phys Chem B 2015; 119:9586-91. [PMID: 26135359 DOI: 10.1021/acs.jpcb.5b03206] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Immobilization of Cytochrome c oxidase (CcO) on electrodes makes voltage-driven reduction of oxygen to water possible. Efficient catalytic turnover in CcO/electrode systems is, however, often observed at large overpotentials that cannot be rationalized by the redox properties of the enzyme itself. To understand the structural basis for this observation, CcO was electrostatically adsorbed on amino-functionalized Ag electrodes, and the redox transitions of heme a and a3 were monitored via surface enhanced resonance Raman spectroscopy (SERRS) as a function of applied potential. Under completely anaerobic conditions, the reduction of heme a3 could be seen at potentials close to those measured in solution indicating an intact catalytic center. However, in the immobilized state, a new non-native heme species was observed that exhibited a redox potential much more negative than measured for the native hemes. Analysis of the high and low frequency SERR spectra indicated that this new species is formed from heme a upon axial loss of one histidine ligand. It is concluded that the formation of the non-native heme a species alters the potential-dependent electron supply to the catalytic reaction and, thus, can have a impact on the applicability of this enzyme in biofuel cells.
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Affiliation(s)
- Murat Sezer
- †Institut für Chemie PC 14, Technische Universität Berlin, Strasse des 17. Juni 135, 10623 Berlin, Germany
| | - Patrycja Kielb
- †Institut für Chemie PC 14, Technische Universität Berlin, Strasse des 17. Juni 135, 10623 Berlin, Germany
| | - Uwe Kuhlmann
- †Institut für Chemie PC 14, Technische Universität Berlin, Strasse des 17. Juni 135, 10623 Berlin, Germany
| | - Hendrik Mohrmann
- ‡Institut für Experimentalphysik, Freie Universität Berlin, Arnimallee 14, 14195 Berlin, Germany
| | - Claudia Schulz
- †Institut für Chemie PC 14, Technische Universität Berlin, Strasse des 17. Juni 135, 10623 Berlin, Germany
| | - Dorothea Heinrich
- ‡Institut für Experimentalphysik, Freie Universität Berlin, Arnimallee 14, 14195 Berlin, Germany
| | - Ramona Schlesinger
- ‡Institut für Experimentalphysik, Freie Universität Berlin, Arnimallee 14, 14195 Berlin, Germany
| | - Joachim Heberle
- ‡Institut für Experimentalphysik, Freie Universität Berlin, Arnimallee 14, 14195 Berlin, Germany
| | - Inez M Weidinger
- †Institut für Chemie PC 14, Technische Universität Berlin, Strasse des 17. Juni 135, 10623 Berlin, Germany
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Simple and Sensitive Electrochemical Sensor-Based Three-Dimensional Porous Ni-Hemoglobin Composite Electrode. CHEMOSENSORS 2014. [DOI: 10.3390/chemosensors2040235] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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Liu J, Dong Y, Zheng J, He Y, Sheng Q. Investigation on the conformation change of hemoglobin immobilized on MPA-modified electrode by electrochemical method. ANAL SCI 2013; 29:1075-81. [PMID: 24212734 DOI: 10.2116/analsci.29.1075] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
The conformation change of bovine hemoglobin (Hb) during the unfolding process induced by urea and acid was investigated by an electrochemical method. Hb unfolding induced by urea of different concentrations was realized by bonding Hb onto a 3-mercaptopropionic acid (MPA) modified gold electrode. The difference in unfolding percentage showed that the Hb unfolding induced by urea was a two-step, three-state transition process, while the unfolding induced by acid was a two-state transition process. The results obtained by the electrochemical method coincided closely with those obtained by UV-vis spectroscopy and fluorescence spectroscopy. Some thermodynamic parameters during the conformational change were also calculated to study the intermediate state during the Hb unfolding process. The present work may lead to an easy and effective way to study metalloproteins unfolding, and holds great promise for the design of novel sensitive biosensors.
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Affiliation(s)
- Jianbo Liu
- Institute of Analytical Science/Shaanxi Provincial Key Laboratory of Electroanalytical Chemistry, Northwest University
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Prasetyo EN, Knes O, Nyanhongo GS, Guebitz GM. Developing SyrinOX total antioxidant capacity assay for measuring antioxidants in humans. Int J Exp Pathol 2012. [PMID: 23198957 DOI: 10.1111/iep.12001] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022] Open
Abstract
Accurate monitoring of the antioxidant status or of oxidative stress in patients is still a big challenge in clinical laboratories. This study investigates the possibility of applying a newly developed total antioxidant capacity assay method based on laccase or peroxidase oxidized syringaldazine [Tetramethoxy azobismethylene quinone (TMAMQ)] which is referred to here as SyrinOX, as a diagnostic tool for monitoring both oxidative stress and antioxidant status in patients. Attempts to adapt the Randox total antioxidant procedure [simultaneous incubation of the radical generating system (metmyoglobin and H(2) O(2) ) and antioxidant sample] for SyrinOX were abandoned after it was discovered that the H(2) O(2) reacted with enzymatically generated TMAMQ and ABTS radicals at a rate of 6.4 × 10(-2) /μM/s and 5.7 × 10(-3) /μM/s respectively. Thus this study for the first time demonstrates the negative effects of H(2) O(2) in the Randox system. This leads to erroneous results because the total antioxidant values obtained are the sum of radicals reduced by antioxidants plus those reacting with the radical generating system. Therefore they should be avoided not only for this particular method but also when using other similar methods. Consequently, SyrinOX is best applied using a three-step approach involving, production of TMAMQ, recovery and purification (free from enzyme and other impurities) and then using TMAMQ for measuring the total antioxidant capacity of samples. Using this approach, the reaction conditions for application of SyrinOX when measuring the total antioxidant capacity of plasma sample were determined to be 50% (v/v) ethanol/50 mM sodium succinate buffer pH 5.5, between 20 and 25 °C for at least 1 h.
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Affiliation(s)
- Endry N Prasetyo
- Institute of Environmental Biotechnology, Graz University of Technology, Graz, Austria
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Lata S, Batra B, Karwasra N, Pundir CS. An amperometric H2O2 biosensor based on cytochrome c immobilized onto nickel oxide nanoparticles/carboxylated multiwalled carbon nanotubes/polyaniline modified gold electrode. Process Biochem 2012. [DOI: 10.1016/j.procbio.2012.03.018] [Citation(s) in RCA: 57] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Su S, Zhang L, Pan Y, Cai Y, Zhang Y. Direct electron transfer of Mb on chitosan/single-wall carbon nanotubes film modified Au electrode and its interaction with cimetidine. RUSS J ELECTROCHEM+ 2011. [DOI: 10.1134/s1023193508020092] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Direct probing of the folding/unfolding event of bovine hemoglobin at montmorillonite clay modified electrode by adsorptive-transfer voltammetry. Talanta 2011; 84:148-54. [DOI: 10.1016/j.talanta.2010.12.038] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2010] [Revised: 12/16/2010] [Accepted: 12/21/2010] [Indexed: 11/22/2022]
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21
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Dai Y, Zheng Y, Swain GM, Proshlyakov DA. Equilibrium and kinetic behavior of Fe(CN)6(3-/4-) and cytochrome c in direct electrochemistry using a film electrode thin-layer transmission cell. Anal Chem 2010; 83:542-8. [PMID: 21166441 DOI: 10.1021/ac102113v] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
We report on the design and performance of a thin-layer electrochemical cell optimized for use with optically transparent film electrodes in combination with UV/vis and IR transmission spectroscopic measurements. The cell allows for measurements under both aerobic and anaerobic conditions. The direct, unmediated electron transfer, as assessed by the current transient, and the corresponding optical response observed for the Fe(CN)(6)(3-/4-) couple were in good agreement with theoretical predictions for voltammetry and optical absorption by an analyte confined in a thin layer. Chronoamperometric and spectroscopic measurements of Fe(CN)(6)(3-/4-) on gold mesh electrode revealed fast kinetics strongly influenced by the electrolyte concentration. Maximal apparent rates exceeding 2 s(-1) in 1 M KCl were observed optically. The direct kinetic and thermodynamic behavior of cytochrome c was compared with several electrode materials using the cell. The results showed heme ligand-dependent changes in the protein-electrode interactions. Mid-UV/visible spectral changes upon redox transitions in native cytochrome c and its cyanide derivative, as well as dissociation of the ferrous cytochrome c-CN complex, are reported.
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Affiliation(s)
- Yingrui Dai
- Department of Chemistry, Michigan State University, East Lansing, Michigan 48824-1322, USA
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22
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Tan XC, Zhang JL, Tan SW, Zhao DD, Huang ZW, Mi Y, Huang ZY. Amperometric hydrogen peroxide biosensor based on immobilization of hemoglobin on a glassy carbon electrode modified with fe(3)o(4)/chitosan core-shell microspheres. SENSORS 2009; 9:6185-99. [PMID: 22454579 PMCID: PMC3312438 DOI: 10.3390/s90806185] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/10/2009] [Revised: 07/23/2009] [Accepted: 08/03/2009] [Indexed: 11/25/2022]
Abstract
Novel magnetic Fe3O4/chitosan (CS) microspheres were prepared using magnetic Fe3O4 nanoparticles and the natural macromolecule chitosan. Then, using an easy and effective hemoglobin (Hb) immobilization method, an innovative biosensor with a Fe3O4/CS-Hb-Fe3O4/CS “sandwich” configuration was constructed. This biosensor had a fast (less than 10 s) response to H2O2 and excellent linear relationships were obtained in the concentration range of 5.0 × 10−5 to 1.8 × 10−3 M and 1.8 × 10−3 to 6.8 × 10−3 M with a detection limit of 4.0 × 10−6 M (s/n = 3) under the optimum conditions. The apparent Michaelis-Menten constant Km was 0.29 mM and it showed the excellent biological activity of the fixed Hb. Moreover, the biosensor had long-time stability and good reproducibility. The method was used to determine H2O2 concentration in real samples.
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Affiliation(s)
- Xue-Cai Tan
- College of Chemistry and Ecological Engineering, Guangxi University for Nationalities, Nanning 530006, China; E-Mails: (J.-L.Z); (S.W.T.); (D.-D.Z.); (Z.-W.H.); (Y.M.); (Z.-Y.H.)
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23
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Time-resolved flow-flash FT-IR difference spectroscopy: the kinetics of CO photodissociation from myoglobin revisited. Anal Bioanal Chem 2009; 394:1869-77. [PMID: 19521691 PMCID: PMC2709881 DOI: 10.1007/s00216-009-2871-0] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2009] [Revised: 05/19/2009] [Accepted: 05/26/2009] [Indexed: 11/24/2022]
Abstract
Fourier-transform infrared (FT-IR) difference spectroscopy has been proven to be a significant tool in biospectroscopy. In particular, the step-scan technique monitors structural and electronic changes at time resolutions down to a few nanoseconds retaining the multiplex advantage of FT-IR. For the elucidation of the functional mechanisms of proteins, this technique is currently limited to repetitive systems undergoing a rapid photocycle. To overcome this obstacle, we developed a flow-flash experiment in a miniaturised flow channel which was integrated into a step-scan FT-IR spectroscopic setup. As a proof of principle, we studied the rebinding reaction of CO to myoglobin after photodissociation. The use of microfluidics reduced the sample consumption drastically such that a typical step-scan experiment takes only a few 10 ml of a millimolar sample solution, making this method particularly interesting for the investigation of biological samples that are only available in small quantities. Moreover, the flow cell provides the unique opportunity to assess the reaction mechanism of proteins that cycle slowly or react irreversibly. We infer that this novel approach will help in the elucidation of molecular reactions as complex as those of vectorial ion transfer in membrane proteins. The potential application to the oxygen splitting reaction of cytochrome c oxidase is discussed.
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24
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Marboutin L, Desbois A, Berthomieu C. Low-Frequency Heme, Iron-Ligand, and Ligand Modes of Imidazole and Imidazolate Complexes of Iron Protoporphyrin and Microperoxidase in Aqueous Solution. An Analysis by Far-Infrared Difference Spectroscopy. J Phys Chem B 2009; 113:4492-9. [DOI: 10.1021/jp810774g] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Laure Marboutin
- Laboratoire des Interactions Protéine Métal, SBVME/iBEB/DSV, CEA-Cadarache, UMR 6191 CNRS CEA Université Aix-Marseille II, Bât 185, 13108 Saint-Paul-lez-Durance Cedex, France, and Laboratoire Stress Oxydant et Détoxication, SB2SM and CNRS URA 2096/iBiTec-S/DSV, CEA-Saclay, 91191 Gif-sur-Yvette cedex, France
| | - Alain Desbois
- Laboratoire des Interactions Protéine Métal, SBVME/iBEB/DSV, CEA-Cadarache, UMR 6191 CNRS CEA Université Aix-Marseille II, Bât 185, 13108 Saint-Paul-lez-Durance Cedex, France, and Laboratoire Stress Oxydant et Détoxication, SB2SM and CNRS URA 2096/iBiTec-S/DSV, CEA-Saclay, 91191 Gif-sur-Yvette cedex, France
| | - Catherine Berthomieu
- Laboratoire des Interactions Protéine Métal, SBVME/iBEB/DSV, CEA-Cadarache, UMR 6191 CNRS CEA Université Aix-Marseille II, Bât 185, 13108 Saint-Paul-lez-Durance Cedex, France, and Laboratoire Stress Oxydant et Détoxication, SB2SM and CNRS URA 2096/iBiTec-S/DSV, CEA-Saclay, 91191 Gif-sur-Yvette cedex, France
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25
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Fourier transform infrared spectroscopy as a tool to study structural properties of cytochromes P450 (CYPs). Anal Bioanal Chem 2008; 392:1031-58. [DOI: 10.1007/s00216-008-2216-4] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2008] [Revised: 05/25/2008] [Accepted: 05/27/2008] [Indexed: 11/25/2022]
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26
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Lu X, Zhang H, Ni Y, Zhang Q, Chen J. Porous nanosheet-based ZnO microspheres for the construction of direct electrochemical biosensors. Biosens Bioelectron 2008; 24:93-8. [PMID: 18457944 DOI: 10.1016/j.bios.2008.03.025] [Citation(s) in RCA: 144] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2008] [Revised: 03/19/2008] [Accepted: 03/19/2008] [Indexed: 11/24/2022]
Abstract
Nanosheet-based ZnO microsphere with porous nanostructures was synthesized by a facile chemical bath deposition method followed by thermal treatment, which was explored for the construction of electrochemical biosensors. Spectroscopic and electrochemical researches revealed the ZnO-based composite was a biocompatible immobilization matrix for enzymes with good enzymatic stability and bioactivity. With advantages of nanostructured inorganic-organic hybrid materials, a pair of stable and well-defined quasi-reversible redox peaks of hemoglobin was obtained with a formal potential of -0.345 V (vs. Ag/AgCl) in pH 7.0 buffer. Facilitated direct electron transfer of the metalloenzymes with an apparent heterogeneous electron transfer rate constant (k(s)) of 3.2s(-1) was achieved on the ZnO-based enzyme electrode. Comparative studies demonstrated the nanosheet-based ZnO microspheres were more effective in facilitating the electron transfer of immobilized enzyme than solid ZnO microspheres, which may result from the unique nanostructures and larger surface area of the porous ZnO. The prepared biosensor displayed good performance for the detection of H(2)O(2) and NaNO(2) with a wide linear range of 1-410 and 10-2700 microM, respectively. The entrapped hemoglobin exhibits high peroxidase-like activity for the catalytic reduction of H(2)O(2) with an apparent Michaelis-Menten constant (K(M)(app)) of 143 microM. The nanosheet-based ZnO could be a promising matrix for the fabrication of direct electrochemical biosensors, and may find wide potential applications in biomedical detection and environmental analysis.
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Affiliation(s)
- Xianbo Lu
- Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, PR China
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27
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Wisitruangsakul N, Zebger I, Ly KH, Murgida DH, Ekgasit S, Hildebrandt P. Redox-linked protein dynamics of cytochrome c probed by time-resolved surface enhanced infrared absorption spectroscopy. Phys Chem Chem Phys 2008; 10:5276-86. [DOI: 10.1039/b806528d] [Citation(s) in RCA: 54] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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28
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Parthasarathy M, Pillai VK, Mulla IS, Shabab M, Khan M. ‘All-solid-state’ electrochemistry of a protein-confined polymer electrolyte film. Biochem Biophys Res Commun 2007; 364:86-91. [DOI: 10.1016/j.bbrc.2007.09.118] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2007] [Accepted: 09/24/2007] [Indexed: 11/25/2022]
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29
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Rich PR, Iwaki M. Methods to probe protein transitions with ATR infrared spectroscopy. MOLECULAR BIOSYSTEMS 2007; 3:398-407. [PMID: 17533453 DOI: 10.1039/b702328f] [Citation(s) in RCA: 47] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We describe techniques that can be used in conjunction with modern attenuated total reflection (ATR) infrared micro-prisms to allow proteins to be manipulated cyclically between different states whilst simultaneously monitoring both mid-IR and UV/visible/near IR changes. These methods provide increased flexibility of the types of changes that can be induced in proteins in comparison to transmission methods. Quantitative measurements can be made of vibrational changes associated with conversion between stable catalytic reaction intermediates, ligand binding and oxidation-reduction. Both hydrophobic and soluble proteins can be analysed and the ability to induce transitions repetitively allows IR difference spectra to be acquired at a signal/noise sufficient to resolve changes due to specific cofactors or amino acids. Such spectra can often be interpreted at the atomic level by standard IR methods of comparisons with model compounds, by isotope and mutation effects and, increasingly, by ab initio simulations. Combination of such analyses with atomic 3D structural models derived from X-ray and NMR studies can lead to a deeper understanding of molecular mechanisms of enzymatic reactions.
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Affiliation(s)
- Peter R Rich
- Glynn Laboratory of Bioenergetics, Department of Biology, University College London, Gower Street, London, U.K.
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30
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Farmer PJ, Lin R, Bayachou M. Electrochemistry and Catalysis by Myoglobin in Surfactant Films. COMMENT INORG CHEM 2006. [DOI: 10.1080/02603599808012254] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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31
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Marboutin L, Boussac A, Berthomieu C. Redox infrared markers of the heme and axial ligands in microperoxidase: bases for the analysis of c-type cytochromes. J Biol Inorg Chem 2006; 11:811-23. [PMID: 16783544 DOI: 10.1007/s00775-006-0119-4] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2006] [Accepted: 05/08/2006] [Indexed: 10/24/2022]
Abstract
Structural changes accompanying the change in the redox state of microperoxidase-8 (MP8), the heme-octapeptide obtained from cytochrome c, and its complexes with (methyl)imidazole ligands were studied by electrochemically induced Fourier transform IR (FTIR) difference spectroscopy. To correlate with confidence IR modes with a specific electronic state of the iron, we used UV-vis and electron paramagnetic resonance spectroscopy to define precisely the heme spin state in the samples at the millimolar concentration of MP8 required for FTIR difference spectroscopy. We identified four intense redox-sensitive IR heme markers, nu38 at 1,569 cm(-1) (ox)/1,554 cm(-1) (red), nu42 at 1,264 cm(-1) (ox)/1,242 cm(-1) (red), nu43 at 1,146 cm(-1) (ox), and nu44 at 1,124-1,128 cm(-1) (ox). The intensity of nu42 and nu43 was clearly enhanced for low-spin imidazole-MP8 complexes, while that of nu44 increased for high-spin MP8. These modes can thus be used as IR markers of the iron spin state in MP8 and related c-type cytochromes. Moreover, one redox-sensitive band at 1,044 cm(-1) (red) is attributed to an IR marker specific of c-type hemes, possibly the delta(CbH3)(2,4) heme mode. Other redox-sensitive IR bands were assigned to the MP8 peptide backbone and to the fifth and sixth axial heme ligands. The distinct IR frequencies for imidazole (1,075 cm(-1)) and histidine (1,105 cm(-1)) side chains in the imidazole-MP8 complex allowed us to provide the first direct determination of their pKa at pH 9 and 12, respectively.
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Affiliation(s)
- Laure Marboutin
- Laboratoire des Interactions Protéine Métal, DEVM-DSV, UMR 6191, CNRS CEA Université Aix-Marseille II, CEA-Cadarache, 13108, Saint Paul-lez-Durance Cedex, France
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32
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33
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Zhou H, Gan X, Liu T, Yang Q, Li G. Effect of nano cadmium sulfide on the electron transfer reactivity and peroxidase activity of hemoglobin. ACTA ACUST UNITED AC 2005; 64:38-45. [PMID: 15975660 DOI: 10.1016/j.jbbm.2005.05.003] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2005] [Revised: 04/10/2005] [Accepted: 05/13/2005] [Indexed: 11/21/2022]
Abstract
Hemoglobin (Hb) is immobilized with cadmium sulfide (CdS) nanoparticles (NPs) on pyrolytic graphite (PG) electrode to characterize the electrochemical reactivity and peroxidase activity of the protein. The result demonstrates that fine redox waves of Hb can be achieved after this protein is entrapped in CdS NPs. Meanwhile, the protein can exhibit nice catalytic activity towards hydrogen peroxide (H2O2). Linear relationship between the reductive peak current and the H2O2 concentration has been obtained from 5.0 x 10(-6) to 4.0 x 10(-4) mol/L, on the basis of which a new kind of H2O2 biosensor might be developed in the future.
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Affiliation(s)
- Hui Zhou
- Department of Biochemistry and National Key Laboratory of Pharmaceutical Biotechnology, Nanjing University, Nanjing 210093, PR China
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34
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Shan W, He P, Hu N. Electrocatalytic reduction of nitric oxide and other substrates on hydrogel triblock copolymer Pluronic films containing hemoglobin or myoglobin based on protein direct electrochemistry. Electrochim Acta 2005. [DOI: 10.1016/j.electacta.2005.04.039] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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35
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Ray A, Feng M, Tachikawa H. Direct electrochemistry and Raman spectroscopy of sol-gel-encapsulated myoglobin. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2005; 21:7456-60. [PMID: 16042479 DOI: 10.1021/la050422s] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
The direct electrochemistry of myoglobin (Mb) has been observed at a glassy carbon (GC) electrode coated with silica sol-gel-encapsulated Mb film. A well-behaved cyclic voltammogram is observed with a midpoint potential (E(1/2)) of -0.25 V vs Ag/AgCl in a pH 7.0 phosphate buffer. This potential, which is pH-dependent, is 70-90 mV more negative than the formal potential values obtained by using the spectroeletrochemical titration method at the same pH. Square wave voltametry (SWV) also shows a peak potential of -0.25 V for the reduction of Mb under the same experimental conditions. Both cathodic and anodic peak currents have a linear relationship with the scan rate. The midpoint potential decreases with pH, having a slope of -30 mV/pH. UV-vis and resonance Raman spectroscopic studies reveal that the sol-gel provides a bio-compatible environment where Mb retains a structure similar to its solution form, a 6-coordinated aquomet myoglobin. These results suggest that the silica sol-gel is a useful matrix for studying direct electrochemistry of other heme proteins.
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Affiliation(s)
- Anandhi Ray
- Department of Chemistry, Jackson State University, 1400 J.R. Lynch Street, Jackson, Mississippi 39217, USA
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36
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Lu Q, Chen X, Wu Y, Hu S. Studies on direct electron transfer and biocatalytic properties of heme proteins in lecithin film. Biophys Chem 2005; 117:55-63. [PMID: 15907360 DOI: 10.1016/j.bpc.2005.04.014] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2005] [Accepted: 03/04/2005] [Indexed: 10/25/2022]
Abstract
Myoglobin (Mb), hemoglobin (Hb) and horseradish peroxidase (HRP) were incorporated in lecithin (PC) film on glassy carbon (GC) electrode by the method of vesicle-fusion. A pair of well-defined and quasi-reversible cyclic voltammetric peaks was obtained, which reflected the direct electron transfer of heme proteins. UV-Vis and reflectance absorption infrared (RAIR) spectroscopy showed that proteins in PC films remained at their secondary structure similar to their native states. Scanning electron microscopy (SEM) demonstrated the interaction between the proteins and PC would make the morphology of protein-PC films very different from the PC films alone. The immobilized proteins retained their biocatalytic activity to the reduction of NO and hydrogen peroxide, which provide the perspective to be the third generation sensors.
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Affiliation(s)
- Qing Lu
- College of Chemistry and Molecular Sciences, Wuhan University, Wuhan 430072, PR China
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37
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Shen L, Hu N. Heme protein films with polyamidoamine dendrimer: direct electrochemistry and electrocatalysis. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2004; 1608:23-33. [PMID: 14741582 DOI: 10.1016/j.bbabio.2003.10.007] [Citation(s) in RCA: 83] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Biocompatible nanosized polyamidoamine (PAMAM) dendrimer films provided a suitable microenvironment for heme proteins to transfer electron directly with underlying pyrolytic graphite (PG) electrodes. Hemoglobin (Hb), myoglobin (Mb), horseradish peroxidase (HRP), and catalase (Cat) incorporated in PAMAM films exhibited a pair of well-defined, quasi-reversible cyclic voltammetric peaks, respectively, characteristic of the protein heme Fe(III)/Fe(II) redox couples. While Hb-, Mb-, and HRP-PAMAM films showed the cyclic voltammetry (CV) peaks at about -0.34 V vs. saturated calomel electrode (SCE) in pH 7.0 buffers, Cat-PAMAM films displayed the peak pair at a more negative potential of -0.47 V. The protein-PAMAM films demonstrated a surface-confined or thin-layer voltammetric behavior. The electrochemical parameters such as apparent heterogeneous electron transfer rate constants (k(s)) and formal potentials (E (degrees ')) were estimated by square wave voltammetry with nonlinear regression analysis. UV-vis and IR spectroscopy showed that the proteins retained their near-native secondary structures in PAMAM films. Oxygen, hydrogen peroxide, and nitrite were catalytically reduced at the protein-PAMAM film electrodes, showing the potential applicability of the films as the new type of biosensors or bioreactors based on direct electrochemistry of the proteins.
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Affiliation(s)
- Li Shen
- Department of Chemistry, Beijing Normal University, 100875 Beijing, China
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38
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Moosavi-Movahedi A, Dayer M, Norouzi P, Shamsipur M, Yeganeh-faal A, Chaichi M, Ghourchian H. Aquamethemoglobin reduction by sodium n-dodecyl sulfate via coordinated water oxidation. Colloids Surf B Biointerfaces 2003. [DOI: 10.1016/s0927-7765(03)00081-x] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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39
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Shang L, Sun Z, Wang X, Li G. Enhanced Peroxidase Activity of Hemoglobin in a DNA Membrane and Its Application to an Unmediated Hydrogen Peroxide Biosensor. ANAL SCI 2003; 19:1537-9. [PMID: 14640454 DOI: 10.2116/analsci.19.1537] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Hemoglobin can exhibit not only a direct electron transfer reacting after being entrapped in a DNA membrane, but also a greatly enhanced peroxidase activity toward the reduction of hydrogen peroxide. Based on the direct electrochemical property and nice enzymatic activity of the protein in a DNA membrane, a reagentless hydrogen peroxide biosensor was prepared. The peak current related to hydrogen peroxide was linearly proportional to its concentration in the range of 1.9 x 10(-6)-6.8 x 10(-4) mol L(-1). The detection limit was 1 x 10(-6) mol/L.
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Affiliation(s)
- Libin Shang
- Department of Biochemistry and National Key Laboratory of Pharmaceutical Biotechnology, Nanjing University, Nanjing 210093, PR China
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40
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Cao D, He P, Hu N. Electrochemical biosensors utilising electron transfer in heme proteins immobilised on Fe3O4nanoparticles. Analyst 2003; 128:1268-74. [PMID: 14667164 DOI: 10.1039/b308242c] [Citation(s) in RCA: 130] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Fe3O4 nanoparticles cast on pyrolytic graphite (PG) electrodes were used to immobilize hemoglobin (Hb), myoglobin (Mb) and horseradish peroxidase (HRP). The Fe3O4 nanoparticles provided a favorable microenvironment for the proteins to directly transfer electrons with electrodes. The protein-Fe3O4 films were used to electrochemically catalyze the reduction of oxygen, trichloroacetic acid, nitrite and hydrogen peroxide, and showed a potential applicability in fabricating biosensors. Transmission electron microscopy (TEM), UV-visible absorption and reflectance absorption infrared (RAIR) spectroscopy, and cyclic and square wave voltammetry, were used to characterize the films.
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Affiliation(s)
- Dongfang Cao
- Department of Chemistry, Beijing Normal University, Beijing 100875, China
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41
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Reza DM, Akbar MMA, Parviz N, Shahrokh S. Inhibition of Human Hemoglobin Autoxidaiton by Sodium n-Dodecyl Sulphate. BMB Rep 2002; 35:364-70. [PMID: 12296994 DOI: 10.5483/bmbrep.2002.35.4.364] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
The effect of sodium n-dodecyl sulphate (SDS) on hemoglobin autoxidation was studied in the presence of a 100 mM phosphate buffer (pH 7.0) by different methods. These included spectrophotometry, fluorescence technique, cyclic voltametry, differential scanning calorimetry, and densitometry. Spectroscopic studies showed that SDS concentrations up to 1 mM increased deoxy-, decreases oxy-, and had no significant effect on the met- conformation of hemoglobin. Therefore, a SDS concentration up to 1 mM increased the deoxy form of hemoglobin as the folded, compact state and decreases the oxy conformation. The turbidity measurements and differential scanning calorimetry techniques indicated a more stable conformation for hemoglobin in the presence of SDS up to 1 mM. Electrochemical studies also confirmed a more difficult oxidation under these conditions. The induction of the deoxy form in the presence of SDS was confirmed by densitometry techniques. The compact structure of deoxyhemoglobin blocks the formation of met-conformation in low SDS concentrations.
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42
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Zhu Y, Cheng G, Dong S. Structural electrochemical study of hemoglobin by in situ circular dichroism thin layer spectroelectrochemistry. Biophys Chem 2002; 97:129-38. [PMID: 12050005 DOI: 10.1016/s0301-4622(02)00045-5] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Secondary and tertiary or quaternary structural changes in hemoglobin (HB) during an electroreduction process were studied by in situ circular dichroism (CD) spectroelectrochemistry with a long optical path thin-layer cell. By means of singular value decomposition least-squares analysis, CD spectra in the far-UV region give two similar alpha components with different CD intensity, indicating slight denaturation in the secondary structures due to the electric field effect. CD spectra in the Soret band show a R-->T transition of two quaternary structural components induced by electroreduction of the heme, which changes the redox states of the center ion from Fe3+ to Fe2+ and the co-ordination number from 6 to 5. The double logarithmic analysis shows that electroreduction of hemoglobin follows a chemical reaction with R-->T transition. Some parameters in the electrochemical process were obtained: formal potential, E0'=-0.167 V; electrochemical kinetic overpotential, deltaE0=-0.32 V; standard electrochemical reaction rate constant, k0=1.79 x 10(-5) cm s(-1); product of electron transfer coefficient and electron number, alphan=0.14; and the equilibrium constant of R-->T transition, Kc=9.0.
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Affiliation(s)
- Yongchun Zhu
- State Key Laboratory of Electroanalytical Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, Jilin 130022, PR China
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43
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Fan C, Wang H, Sun S, Zhu D, Wagner G, Li G. Electron-transfer reactivity and enzymatic activity of hemoglobin in a SP Sephadex membrane. Anal Chem 2001; 73:2850-4. [PMID: 11467526 DOI: 10.1021/ac001397s] [Citation(s) in RCA: 162] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Hemoglobin can exhibit a direct electron-transfer reaction after being entrapped in a SP Sephadex membrane. A pair of stable and well-defined redox waves are obtained at a hemoglobin-SP sephadex modified pyrolytic graphite electrode. The anodic and cathodic peak potentials are located at -0.244 and -0.336 V (vs SCE), respectively. On the other hand, the peroxidase activity of the protein in the membrane is also greatly enhanced. The apparent Michaelis-Menten constant is calculated to be 1.9 mM, which shows a large catalytic activity of hemoglobin in the SP Sephadex membrane toward hydrogen peroxide (H2O2). According to the direct electron-transfer property and enhanced peroxidase activity of Hb in the membrane, a Hb/SP Sephadex membrane-based H2O2 biosensor is prepared, with a linear range approximately 5.0 x 10(-6) to 1.6 x 10(-4) mol/L.
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Affiliation(s)
- C Fan
- Department of Biochemistry and National Laboratory of Pharmaceutical Biotechnology, Nanjing University, PR China
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Cheng Y, Lin H, Xue D, Li R, Wang K. Lanthanide ions induce hydrolysis of hemoglobin-bound 2,3-diphosphoglycerate (2,3-DPG), conformational changes of globin and bidirectional changes of 2,3-DPG-hemoglobin's oxygen affinity. BIOCHIMICA ET BIOPHYSICA ACTA 2001; 1535:200-16. [PMID: 11342009 DOI: 10.1016/s0925-4439(00)00100-9] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
Abstract
The changes in structure and function of 2,3-diphosphoglycerate-hemoglobin (2,3-DPG-Hb) induced by Ln(3+) binding were studied by spectroscopic methods. The binding of lanthanide cations to 2,3-DPG is prior to that to Hb. Ln(3+) binding causes the hydrolysis of either one from the two phosphomonoester bonds in 2,3-DPG non-specifically. The results using the ultrafiltration method indicate that Ln(3+) binding sites for Hb can be classified into three categories: i.e. positive cooperative sites (N(I)), non-cooperative strong sites (N(S)) and non-cooperative weak sites (N(W)) with binding constants in decreasing order: K(I)>K(S)>K(W). The total number of binding sites amounts to about 65 per Hb tetramer. Information on reaction kinetics was obtained from the change of intrinsic fluorescence in Hb monitored by stopped-flow fluorometry. Fluctuation of fluorescence dependent on Ln(3+) concentration and temperature was observed and can be attributed to the successive conformational changes induced by Ln(3+) binding. The results also reveal the bidirectional changes of the oxygen affinity of Hb in the dependence on Ln(3+) concentration. At the range of [Ln(3+)]/[Hb]<2, the marked increase of oxygen affinity (P(50) decrease) with the Ln(3+) concentration can be attributed to the hydrolysis of 2,3-DPG, while the slight rebound of oxygen affinity in higher Ln(3+) concentration can be interpreted by the transition to the T-state of the Hb tetramer induced by Ln(3+) binding. This was indicated by the changes in secondary structure characterized by the decrease of alpha-helix content.
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Affiliation(s)
- Y Cheng
- National Research Laboratories of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, People's Republic of China
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Abstract
An overview of the application of Fourier transform infrared spectroscopy for the analysis of the structure of proteins and protein-ligand recognition is given. The principle of the technique and of the spectra analysis is demonstrated. Spectral signal assignments to vibrational modes of the peptide chromophore, amino acid side chains, cofactors and metal ligands are summarized. Several examples for protein-ligand recognition are discussed. A particular focus is heme proteins and, as an example, studies of cytochrome P450 are reviewed. Fourier transform infrared spectroscopy in combination with the various techniques such as time-resolved and low-temperature methods, site-directed mutagenesis and isotope labeling is a helpful approach to studying protein-ligand recognition.
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Affiliation(s)
- C Jung
- Max-Delbrück-Center for Molecular Medicine, Berlin, Germany.
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Fan C, Zhuang Y, Li G, Zhu J, Zhu D. Direct Electrochemistry and Enhanced Catalytic Activity for Hemoglobin in a Sodium Montmorillonite Film. ELECTROANAL 2000. [DOI: 10.1002/1521-4109(200010)12:14<1156::aid-elan1156>3.0.co;2-4] [Citation(s) in RCA: 95] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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47
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Reipa V, Holden MJ, Mayhew MP, Vilker VL. Temperature dependence of the formal reduction potential of putidaredoxin. BIOCHIMICA ET BIOPHYSICA ACTA 2000; 1459:1-9. [PMID: 10924895 DOI: 10.1016/s0005-2728(00)00108-0] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Abstract
Putidaredoxin (Pdx), a [2Fe-2S] redox protein of size M(r) 11,600, transfers two electrons in two separate steps from the flavin containing putidaredoxin reductase to the heme protein, cytochrome CYP101 in the P450cam catalytic cycle. It has recently come to light, through NMR measurements, that there can be appreciable differences in the Pdx conformational dynamics between its reduced and oxidized states. The redox reaction entropy, deltaS(0')rc = (S(0')Pdx(r)-S(0')Pdx(0)), as determined from measurements of the variation in formal potential with temperature, E0'(T), provides a measure of the strength of this influence on Pdx function. We designed a spectroelectrochemical cell using optically transparent tin oxide electrodes, without fixed or diffusible mediators, to measure E0'(T) over the temperature range 0-40 degrees C. The results indicate that the redox reaction entropy for Pdx is biphasic, decreasing from -213 +/- 27 J mol(-1) K(-1) over 0-27 degrees C, to -582 +/- 150 J mol(-1) K (-1) over 27-40 degrees C. These redox reaction entropy changes are significantly more negative than the changes reported for most cytochromes, although our measurement over the temperature interval 0-27 degrees C is in the range reported for other iron-sulfur proteins. This suggests that Pdx (and other ferredoxins) is a less rigid system than monohemes, and that redox-linked changes in conformation, and/or conformational dynamics, impart to these proteins the ability to interact with a number of redox partners.
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Affiliation(s)
- V Reipa
- Biotechnology Division, National Institute of Standards and Technology, Gaithersburg, MD 20899, USA
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Cheng Y, Li Y, Li R, Lu J, Wang K. Orally administrated cerium chloride induces the conformational changes of rat hemoglobin, the hydrolysis of 2,3-DPG and the oxidation of heme-Fe(II), leading to changes of oxygen affinity. Chem Biol Interact 2000; 125:191-208. [PMID: 10731519 DOI: 10.1016/s0009-2797(00)00146-0] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
Abstract
The structure and oxygen affinity of hemoglobin from erythrocytes of CeCl(3) fed Wistar rats in the dose range of 0.2-20.0 mg/kg body weight/day were investigated by means of various spectroscopic methods. The changes in oxygen saturation curves of hemoglobin are dependent upon both feeding dose and feeding time. After 40 days feeding with 20 mg CeCl(3)/kg body weight/day, the curve changed to a double sigmoid shape and the oxygen affinity in low oxygen pressure increases. It regained the sigmoid form after 80 days feeding, but the degree of oxygen saturation in higher oxygen pressure became higher than that in the control. These results indicate that CeCl(3) can increase the oxygen affinity of hemoglobin of rat erythrocytes. This effect is further demonstrated by the analysis of Mössbauer spectra of erythrocytes. Increase of hemoglobin content in erythrocytes was found in rats fed with CeCl(3). It might be the offset response to the poor oxygen-releasing capability of the hemoglobin. CD and FT-IR deconvoluted spectra indicate that secondary structures of hemoglobin have remarkable changes, characterized by a gradual decrease of alpha-helix content, in a dose- and feeding time-dependent fashion. Meanwhile, the 31P NMR spectra demonstrate that the level of 2,3-diphosphoglyceric acid (2,3-DPG) in erythrocytes, an allosteric regulator of oxygen release from hemoglobin, decreases due to its hydrolysis. In addition, the Mössbauer and ESR spectra show clearly that a fraction of the heme-iron changes from Fe (II) to Fe (III) in CeCl(3) fed rats. The results indicate that the oral administration of CeCl(3) leads to a microenvironment changes of heme in intracellular hemoglobin. Oxygen affinity changes might be attributed to a series of events triggered by the binding of Ce (III) to hemoglobin and 2,3-DPG, including conformational changes of hemoglobin and 2,3-DPG hydrolysis, respectively and also the partial transformation from heme-Fe (II) to heme-Fe (III).
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Affiliation(s)
- Y Cheng
- National Research Laboratories of Natural and Biomimetic Drugs, Beijing Medical University, Beijing, China
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49
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Study of biomolecules by combining electrochemistry with UV/Vis, IR and surface enhanced Raman scattering spectroscopy by a novel flow microcell. Anal Chim Acta 1999. [DOI: 10.1016/s0003-2670(98)00798-3] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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50
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Katterle M, Wollenberger U, Scheller FW. Electrochemistry of hemoglobin at modified silver electrodes is not a redox-process of iron protoporphyrin IX. ELECTROANAL 1997. [DOI: 10.1002/elan.1140091804] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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