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Yazgan NN, Bulat T, Topcu A, Dudak FC, Boyaci IH, Tamer U. Surface-enhanced Raman scattering-based detection of plasmin activity by specific peptide substrate. Food Chem 2022; 372:131235. [PMID: 34624781 DOI: 10.1016/j.foodchem.2021.131235] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2021] [Revised: 08/30/2021] [Accepted: 09/24/2021] [Indexed: 01/12/2023]
Abstract
In this study, a new surface-enhanced Raman scattering (SERS)-based method has been developed for the detection of plasmin activity. Firstly, different peptide sequences, which are specific to plasmin, were examined. Then, SERS substrates were prepared by chosen peptide substrate. Enzyme activity was determined by pursuing the reduction of DTNB band at 1331 cm-1 with Raman spectroscopy. The reduction in SERS intensity was related to the plasmin activity, and changes in SERS intensity vs. plasmin concentration graph was obtained. Limit of detection (LOD) and limit of quantification (LOQ) values were calculated as 2.14 U/mL and 6.42 U/mL, respectively. Intra- and inter-day repeatability results were determined as 1.45% and 1.47% relative standard deviation (RSD). Also, recovery of the method was determined for the plasmin spiked milk samples. The results demonstrated that the proposed method could be successfully used to detect the plasmin activity in milk samples.
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Affiliation(s)
- Nazife Nur Yazgan
- Department of Food Engineering, Faculty of Engineering, Hacettepe University, Beytepe 06800, Ankara, Turkey
| | - Tugba Bulat
- Department of Food Engineering, Faculty of Engineering, Hacettepe University, Beytepe 06800, Ankara, Turkey
| | - Ali Topcu
- Department of Food Engineering, Faculty of Engineering, Hacettepe University, Beytepe 06800, Ankara, Turkey.
| | - Fahriye Ceyda Dudak
- Department of Food Engineering, Faculty of Engineering, Hacettepe University, Beytepe 06800, Ankara, Turkey
| | - Ismail Hakki Boyaci
- Department of Food Engineering, Faculty of Engineering, Hacettepe University, Beytepe 06800, Ankara, Turkey
| | - Uğur Tamer
- Department of Analytical Chemistry, Faculty of Pharmacy, Gazi University, 06330 Ankara, Turkey
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2
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Guo D, Gan ZF, Jiang L, Cao MF, Patrice FT, Hafez ME, Li DW. Detection of leucine aminopeptidase activity in serum using surface-enhanced Raman spectroscopy. Analyst 2019; 144:1394-1400. [DOI: 10.1039/c8an02182a] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A specific reaction-based SERS approach was developed for the selective and sensitive detection of leucine aminopeptidase activity in serum.
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Affiliation(s)
- Dan Guo
- Key Laboratory for Advanced Materials
- Joint International Laboratory for Precision Chemistry & School of Chemistry and Molecular Engineering
- East China University of Science and Technology
- Shanghai 200237
- China
| | - Zhen-Fei Gan
- Key Laboratory for Advanced Materials
- Joint International Laboratory for Precision Chemistry & School of Chemistry and Molecular Engineering
- East China University of Science and Technology
- Shanghai 200237
- China
| | - Lei Jiang
- Key Laboratory for Advanced Materials
- Joint International Laboratory for Precision Chemistry & School of Chemistry and Molecular Engineering
- East China University of Science and Technology
- Shanghai 200237
- China
| | - Mao-Feng Cao
- Key Laboratory for Advanced Materials
- Joint International Laboratory for Precision Chemistry & School of Chemistry and Molecular Engineering
- East China University of Science and Technology
- Shanghai 200237
- China
| | - Fato Tano Patrice
- Key Laboratory for Advanced Materials
- Joint International Laboratory for Precision Chemistry & School of Chemistry and Molecular Engineering
- East China University of Science and Technology
- Shanghai 200237
- China
| | - Mahmoud Elsayed Hafez
- Key Laboratory for Advanced Materials
- Joint International Laboratory for Precision Chemistry & School of Chemistry and Molecular Engineering
- East China University of Science and Technology
- Shanghai 200237
- China
| | - Da-Wei Li
- Key Laboratory for Advanced Materials
- Joint International Laboratory for Precision Chemistry & School of Chemistry and Molecular Engineering
- East China University of Science and Technology
- Shanghai 200237
- China
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3
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Abstract
This review focuses on the recent advances in SERS and its potential to detect multiple biomolecules in clinical samples.
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Affiliation(s)
- Stacey Laing
- Centre for Molecular Nanometrology
- WestCHEM
- Pure and Applied Chemistry
- University of Strathclyde
- Technology and Innovation Centre
| | - Kirsten Gracie
- Centre for Molecular Nanometrology
- WestCHEM
- Pure and Applied Chemistry
- University of Strathclyde
- Technology and Innovation Centre
| | - Karen Faulds
- Centre for Molecular Nanometrology
- WestCHEM
- Pure and Applied Chemistry
- University of Strathclyde
- Technology and Innovation Centre
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4
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Fu C, Xu W, Chen G, Xu S. ‘Switch-off’ biosensing for chymotrypsin-catalyzed reaction by SPR–SERS spectroscopy. Analyst 2013; 138:6282-6. [DOI: 10.1039/c3an01427d] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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5
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Sezer M, Millo D, Weidinger IM, Zebger I, Hildebrandt P. Analyzing the catalytic processes of immobilized redox enzymes by vibrational spectroscopies. IUBMB Life 2012; 64:455-64. [PMID: 22535701 DOI: 10.1002/iub.1020] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2012] [Accepted: 02/12/2012] [Indexed: 11/10/2022]
Abstract
Analyzing the structure and function of redox enzymes attached to electrodes is a central challenge in many fields of fundamental and applied life science. Electrochemical techniques such as cyclic voltammetry which are routinely used do not provide insight into the molecular structure and reaction mechanisms of the immobilized proteins. Surface-enhanced infrared absorption (SEIRA) and surface-enhanced resonance Raman (SERR) spectroscopy may fill this gap, if nanostructured Au or Ag are used as conductive support materials. In this account, we will first outline the principles of the methodology including a description of the most important strategies for biocompatible protein immobilization. Subsequently, we will critically review SERR and SEIRA spectroscopic approaches to characterize the protein and active site structure of the immobilized enzymes. Special emphasis is laid on the combination of surface-enhanced vibrational spectroscopies with electrochemical methods to analyze equilibria and dynamics of the interfacial redox processes. Finally, we will assess the potential of SERR and SEIRA spectroscopy for in situ investigations on the basis of the first promising studies on human sulfite oxidase and hydrogenases under turnover conditions.
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Affiliation(s)
- Murat Sezer
- Technische Universität Berlin, Institut für Chemie, Sekr. PC14, Straße des 17. Juni 135, D-10623 Berlin, Germany
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6
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Larmour IA, Graham D. Surface enhanced optical spectroscopies for bioanalysis. Analyst 2011; 136:3831-53. [DOI: 10.1039/c1an15452d] [Citation(s) in RCA: 88] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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7
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Larmour IA, Faulds K, Graham D. The past, present and future of enzyme measurements using surface enhanced Raman spectroscopy. Chem Sci 2010. [DOI: 10.1039/c0sc00226g] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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Bishop KJM, Wilmer CE, Soh S, Grzybowski BA. Nanoscale forces and their uses in self-assembly. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2009; 5:1600-30. [PMID: 19517482 DOI: 10.1002/smll.200900358] [Citation(s) in RCA: 885] [Impact Index Per Article: 59.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
The ability to assemble nanoscopic components into larger structures and materials depends crucially on the ability to understand in quantitative detail and subsequently "engineer" the interparticle interactions. This Review provides a critical examination of the various interparticle forces (van der Waals, electrostatic, magnetic, molecular, and entropic) that can be used in nanoscale self-assembly. For each type of interaction, the magnitude and the length scale are discussed, as well as the scaling with particle size and interparticle distance. In all cases, the discussion emphasizes characteristics unique to the nanoscale. These theoretical considerations are accompanied by examples of recent experimental systems, in which specific interaction types were used to drive nanoscopic self-assembly. Overall, this Review aims to provide a comprehensive yet easily accessible resource of nanoscale-specific interparticle forces that can be implemented in models or simulations of self-assembly processes at this scale.
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Affiliation(s)
- Kyle J M Bishop
- Department of Chemical and Biological Engineering, Northwestern University, Evasnton, IL 60208, USA
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Hering K, Cialla D, Ackermann K, Dörfer T, Möller R, Schneidewind H, Mattheis R, Fritzsche W, Rösch P, Popp J. SERS: a versatile tool in chemical and biochemical diagnostics. Anal Bioanal Chem 2007; 390:113-24. [DOI: 10.1007/s00216-007-1667-3] [Citation(s) in RCA: 406] [Impact Index Per Article: 23.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2007] [Revised: 09/28/2007] [Accepted: 10/01/2007] [Indexed: 11/27/2022]
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10
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Ingram A, Stokes RJ, Redden J, Gibson K, Moore B, Faulds K, Graham D. 8-Hydroxyquinolinyl Azo Dyes: A Class of Surface-Enhanced Resonance Raman Scattering-Based Probes for Ultrasensitive Monitoring of Enzymatic Activity. Anal Chem 2007; 79:8578-83. [DOI: 10.1021/ac071409a] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Andrew Ingram
- Centre for Molecular Nanometrology, WestCHEM, University of Strathclyde, 295 Cathedral Street, Glasgow, UK
| | - Robert J. Stokes
- Centre for Molecular Nanometrology, WestCHEM, University of Strathclyde, 295 Cathedral Street, Glasgow, UK
| | - Julie Redden
- Centre for Molecular Nanometrology, WestCHEM, University of Strathclyde, 295 Cathedral Street, Glasgow, UK
| | - Kirsty Gibson
- Centre for Molecular Nanometrology, WestCHEM, University of Strathclyde, 295 Cathedral Street, Glasgow, UK
| | - Barry Moore
- Centre for Molecular Nanometrology, WestCHEM, University of Strathclyde, 295 Cathedral Street, Glasgow, UK
| | - Karen Faulds
- Centre for Molecular Nanometrology, WestCHEM, University of Strathclyde, 295 Cathedral Street, Glasgow, UK
| | - Duncan Graham
- Centre for Molecular Nanometrology, WestCHEM, University of Strathclyde, 295 Cathedral Street, Glasgow, UK
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11
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Souza GR, Levin CS, Hajitou A, Pasqualini R, Arap W, Miller JH. In Vivo Detection of Gold−Imidazole Self-Assembly Complexes: NIR-SERS Signal Reporters. Anal Chem 2006; 78:6232-7. [PMID: 16944906 DOI: 10.1021/ac060483a] [Citation(s) in RCA: 66] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Here we report in vitro and in vivo detection of self-assembled Au-imidazole by using near-infrared surface-enhanced Raman scattering (NIR-SERS). In vivo, the Au-imidazole structures were administered into tumor-bearing mice and detected noninvasively. The self-assembled Au-imidazole complexes were generated by the adsorption of imidazole molecules onto Au nanoparticles (NP) and were then characterized as aqueous suspensions by using NIR-SERS, angle-dependent light scattering with fractal dimension analysis, and visible extinction spectroscopy. The structure and optical activity was sensitive to imidazole concentration and Au NP size. Specifically, the Au-imidazole assemblies formed at lower imidazole concentrations had the lowest fractal dimension (D(f) = 1.2) and the largest Raman enhancement factors for the dominant NIR-SERS feature, a ring-breathing vibrational mode at 954 cm(-1). Changes in elastic scattering intensity, fractal dimension, and surface plasmon absorption were observed with increasing imidazole concentration. The Raman enhancement factor was also found to range between 10(6) and 10(9) with different primary Au nanoparticle sizes. For the higher enhancement factor systems, NIR-SERS detection of Au-imidazole was performed with data acquisitions time of only 5 s. The largest enhancement was observed for the 954-cm(-1) feature at an imidazole concentration of 1.9 microM when coupled to 54-nm-diameter Au NPs (the largest NP tested). Finally, we show the first demonstration of in vivo, noninvasive, and real-time SERS detection.
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Affiliation(s)
- Glauco R Souza
- Department of Chemistry, The George Washington University, Washington, D.C. 20052, USA
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Katz E, Willner I. Integrated nanoparticle-biomolecule hybrid systems: synthesis, properties, and applications. Angew Chem Int Ed Engl 2005; 43:6042-108. [PMID: 15538757 DOI: 10.1002/anie.200400651] [Citation(s) in RCA: 1630] [Impact Index Per Article: 85.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
Nanomaterials, such as metal or semiconductor nanoparticles and nanorods, exhibit similar dimensions to those of biomolecules, such as proteins (enzymes, antigens, antibodies) or DNA. The integration of nanoparticles, which exhibit unique electronic, photonic, and catalytic properties, with biomaterials, which display unique recognition, catalytic, and inhibition properties, yields novel hybrid nanobiomaterials of synergetic properties and functions. This review describes recent advances in the synthesis of biomolecule-nanoparticle/nanorod hybrid systems and the application of such assemblies in the generation of 2D and 3D ordered structures in solutions and on surfaces. Particular emphasis is directed to the use of biomolecule-nanoparticle (metallic or semiconductive) assemblies for bioanalytical applications and for the fabrication of bioelectronic devices.
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Affiliation(s)
- Eugenii Katz
- Institute of Chemistry, The Hebrew University of Jerusalem, Jerusalem 91904, Israel
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13
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Katz E, Willner I. Integrierte Hybridsysteme aus Nanopartikeln und Biomolekülen: Synthese, Eigenschaften und Anwendungen. Angew Chem Int Ed Engl 2004. [DOI: 10.1002/ange.200400651] [Citation(s) in RCA: 256] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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14
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Bjerneld EJ, Földes-Papp Z, Käll M, Rigler R. Single-Molecule Surface-Enhanced Raman and Fluorescence Correlation Spectroscopy of Horseradish Peroxidase. J Phys Chem B 2002. [DOI: 10.1021/jp012268y] [Citation(s) in RCA: 102] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Erik J. Bjerneld
- Department of Applied Physics, Chalmers University of Technology, S-412 96 Göteborg, Sweden, Clinical Immunology and Jean Dausset Laboratory, Graz University M. S. and Hospital, Auenbruggerplatz 8, A-8036 Graz, LKH, Austria, Department of Medical Biophysics, MBB, Karolinska Institute, S-171 77 Stockholm, Sweden
| | - Zeno Földes-Papp
- Department of Applied Physics, Chalmers University of Technology, S-412 96 Göteborg, Sweden, Clinical Immunology and Jean Dausset Laboratory, Graz University M. S. and Hospital, Auenbruggerplatz 8, A-8036 Graz, LKH, Austria, Department of Medical Biophysics, MBB, Karolinska Institute, S-171 77 Stockholm, Sweden
| | - Mikael Käll
- Department of Applied Physics, Chalmers University of Technology, S-412 96 Göteborg, Sweden, Clinical Immunology and Jean Dausset Laboratory, Graz University M. S. and Hospital, Auenbruggerplatz 8, A-8036 Graz, LKH, Austria, Department of Medical Biophysics, MBB, Karolinska Institute, S-171 77 Stockholm, Sweden
| | - Rudolf Rigler
- Department of Applied Physics, Chalmers University of Technology, S-412 96 Göteborg, Sweden, Clinical Immunology and Jean Dausset Laboratory, Graz University M. S. and Hospital, Auenbruggerplatz 8, A-8036 Graz, LKH, Austria, Department of Medical Biophysics, MBB, Karolinska Institute, S-171 77 Stockholm, Sweden
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16
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17
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Niemeyer CM. Nanoparticles, Proteins, and Nucleic Acids: Biotechnology Meets Materials Science. Angew Chem Int Ed Engl 2001; 40:4128-4158. [DOI: 10.1002/1521-3773(20011119)40:22<4128::aid-anie4128>3.0.co;2-s] [Citation(s) in RCA: 2006] [Impact Index Per Article: 87.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2001] [Indexed: 01/04/2023]
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18
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Dick LA, Haes AJ, Van Duyne RP. Distance and Orientation Dependence of Heterogeneous Electron Transfer: A Surface-Enhanced Resonance Raman Scattering Study of Cytochrome c Bound to Carboxylic Acid Terminated Alkanethiols Adsorbed on Silver Electrodes. J Phys Chem B 2000. [DOI: 10.1021/jp0029717] [Citation(s) in RCA: 103] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Lisa A. Dick
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208-3113
| | - Amanda J. Haes
- Department of Chemistry, Northwestern University, Evanston, Illinois 60208-3113
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Keating CD, Kovaleski KM, Natan MJ. Protein:Colloid Conjugates for Surface Enhanced Raman Scattering: Stability and Control of Protein Orientation. J Phys Chem B 1998. [DOI: 10.1021/jp982723z] [Citation(s) in RCA: 168] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Keating CD, Kovaleski KK, Natan MJ. Heightened Electromagnetic Fields between Metal Nanoparticles: Surface Enhanced Raman Scattering from Metal−Cytochromec-Metal Sandwiches. J Phys Chem B 1998. [DOI: 10.1021/jp982724r] [Citation(s) in RCA: 80] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Abstract
▪ Abstract This review focuses on the characterization of interfaces, specifically on the optical methods of characterization that utilize some form of spatial localization to circumvent the special problems accruing to interfaces. Experiments utilizing radiation in only the infrared through the ultraviolet regions of the electromagnetic spectrum are considered. We specifically exclude the vast and important array of experimental techniques that utilize the vacuum ultraviolet and X-ray spectral regions. In addition, the interfaces considered are those composed of solids with liquids, thin films, and other solids, thus largely ignoring the literature of ultrahigh vacuum surface science.
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Affiliation(s)
- Paul W. Bohn
- Department of Chemistry, Materials Research Laboratory and Beckman Institute, University of Illinois at Urbana-Champaign, 600 South Mathews Avenue, Urbana, Illinois 61801
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23
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Anderson JL, Bowden EF, Pickup PG. Dynamic Electrochemistry: Methodology and Application. Anal Chem 1996. [DOI: 10.1021/a1960015y] [Citation(s) in RCA: 82] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- James L. Anderson
- Department of Chemistry, University of Georgia, Athens, Georgia 30602
| | - Edmond F. Bowden
- Department of Chemistry, North Carolina State University, Raleigh, North Carolina 27695
| | - Peter G. Pickup
- Department of Chemistry, Memorial University of Newfoundland, St. John's, Newfoundland, Canada A1B 3X7
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