• Reference Citation Analysis
  • v
  • v
  • Find an Article
Find an Article PDF (4614806)   Today's Articles (58)   Subscriber (49390)
For: Lin MT, Baldansuren A, Hart R, Samoilova RI, Narasimhulu KV, Yap LL, Choi SK, O'Malley PJ, Gennis RB, Dikanov SA. Interactions of intermediate semiquinone with surrounding protein residues at the Q(H) site of wild-type and D75H mutant cytochrome bo3 from Escherichia coli. Biochemistry 2012;51:3827-38. [PMID: 22497216 DOI: 10.1021/bi300151q] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Number Cited by Other Article(s)
1
Murali R, Hemp J, Gennis RB. Evolution of quinol oxidation within the heme‑copper oxidoreductase superfamily. BIOCHIMICA ET BIOPHYSICA ACTA. BIOENERGETICS 2022;1863:148907. [PMID: 35944661 DOI: 10.1016/j.bbabio.2022.148907] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/19/2022] [Revised: 07/09/2022] [Accepted: 08/02/2022] [Indexed: 06/15/2023]
2
Cryo-EM structures of Escherichia coli cytochrome bo 3 reveal bound phospholipids and ubiquinone-8 in a dynamic substrate binding site. Proc Natl Acad Sci U S A 2021;118:2106750118. [PMID: 34417297 DOI: 10.1073/pnas.2106750118] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
3
Iwasaki T, Miyajima-Nakano Y, Fukazawa R, Lin MT, Matsushita SI, Hagiuda E, Taguchi AT, Dikanov SA, Oishi Y, Gennis RB. Escherichia coli amino acid auxotrophic expression host strains for investigating protein structure-function relationships. J Biochem 2021;169:387-394. [PMID: 33289521 DOI: 10.1093/jb/mvaa140] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2020] [Accepted: 11/16/2020] [Indexed: 11/13/2022]  Open
4
Sarewicz M, Pintscher S, Pietras R, Borek A, Bujnowicz Ł, Hanke G, Cramer WA, Finazzi G, Osyczka A. Catalytic Reactions and Energy Conservation in the Cytochrome bc1 and b6f Complexes of Energy-Transducing Membranes. Chem Rev 2021;121:2020-2108. [PMID: 33464892 PMCID: PMC7908018 DOI: 10.1021/acs.chemrev.0c00712] [Citation(s) in RCA: 61] [Impact Index Per Article: 20.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2020] [Indexed: 12/16/2022]
5
Melin F, Hellwig P. Redox Properties of the Membrane Proteins from the Respiratory Chain. Chem Rev 2020;120:10244-10297. [DOI: 10.1021/acs.chemrev.0c00249] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
6
Pintscher S, Wójcik-Augustyn A, Sarewicz M, Osyczka A. Charge polarization imposed by the binding site facilitates enzymatic redox reactions of quinone. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2020;1861:148216. [PMID: 32387188 DOI: 10.1016/j.bbabio.2020.148216] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/14/2020] [Revised: 04/27/2020] [Accepted: 04/29/2020] [Indexed: 11/19/2022]
7
Structure of the cytochrome aa 3 -600 heme-copper menaquinol oxidase bound to inhibitor HQNO shows TM0 is part of the quinol binding site. Proc Natl Acad Sci U S A 2019;117:872-876. [PMID: 31888984 DOI: 10.1073/pnas.1915013117] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]  Open
8
Ding Z, Sun C, Yi SM, Gennis RB, Dikanov SA. The Ubiquinol Binding Site of Cytochrome bo3 from Escherichia coli Accommodates Menaquinone and Stabilizes a Functional Menasemiquinone. Biochemistry 2019;58:4559-4569. [PMID: 31644263 DOI: 10.1021/acs.biochem.9b00750] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
9
Taguchi AT, Evans ED, Dikanov SA, Griffin RG. Convolutional Neural Network Analysis of Two-Dimensional Hyperfine Sublevel Correlation Electron Paramagnetic Resonance Spectra. J Phys Chem Lett 2019;10:1115-1119. [PMID: 30789745 PMCID: PMC8300483 DOI: 10.1021/acs.jpclett.8b03797] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
10
Melin F, Sabuncu S, Choi SK, Leprince A, Gennis RB, Hellwig P. Role of the tightly bound quinone for the oxygen reaction of cytochrome bo 3 oxidase from Escherichia coli. FEBS Lett 2018;592:3380-3387. [DOI: 10.1002/1873-3468.13263] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2018] [Revised: 09/21/2018] [Accepted: 09/24/2018] [Indexed: 01/24/2023]
11
Dikanov SA, Taguchi AT. Two-Dimensional Pulsed EPR Resolves Hyperfine Coupling Strain in Nitrogen Hydrogen Bond Donors of Semiquinone Intermediates. J Phys Chem B 2018;122:5205-5211. [DOI: 10.1021/acs.jpcb.8b02511] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
12
De Almeida WB, O'Malley PJ. Conformational control of cofactors in nature: The effect of methoxy group orientation on the electronic structure of ubisemiquinone. Chem Phys Lett 2018. [DOI: 10.1016/j.cplett.2017.12.066] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
13
Taguchi AT, O’Malley PJ, Wraight CA, Dikanov SA. Determination of the Complete Spin Density Distribution in 13C-Labeled Protein-Bound Radical Intermediates Using Advanced 2D Electron Paramagnetic Resonance Spectroscopy and Density Functional Theory. J Phys Chem B 2017;121:10256-10268. [DOI: 10.1021/acs.jpcb.7b10036] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
14
Seif Eddine M, Biaso F, Arias‐Cartin R, Pilet E, Rendon J, Lyubenova S, Seduk F, Guigliarelli B, Magalon A, Grimaldi S. Probing the Menasemiquinone Binding Mode to Nitrate Reductase A by Selective2H and15N Labeling, HYSCORE Spectroscopy, and DFT Modeling. Chemphyschem 2017;18:2704-2714. [DOI: 10.1002/cphc.201700571] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2017] [Revised: 07/04/2017] [Indexed: 11/05/2022]
15
Choi SK, Schurig-Briccio L, Ding Z, Hong S, Sun C, Gennis RB. Location of the Substrate Binding Site of the Cytochrome bo3 Ubiquinol Oxidase from Escherichia coli. J Am Chem Soc 2017;139:8346-8354. [PMID: 28538096 DOI: 10.1021/jacs.7b03883] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
16
Choi SK, Lin MT, Ouyang H, Gennis RB. Searching for the low affinity ubiquinone binding site in cytochrome bo3 from Escherichia coli. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2017;1858:366-370. [PMID: 28235459 DOI: 10.1016/j.bbabio.2017.02.008] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/12/2016] [Revised: 02/11/2017] [Accepted: 02/14/2017] [Indexed: 11/25/2022]
17
Sun C, Taguchi AT, Vermaas JV, Beal NJ, O'Malley PJ, Tajkhorshid E, Gennis RB, Dikanov SA. Q-Band Electron-Nuclear Double Resonance Reveals Out-of-Plane Hydrogen Bonds Stabilize an Anionic Ubisemiquinone in Cytochrome bo3 from Escherichia coli. Biochemistry 2016;55:5714-5725. [PMID: 27622672 DOI: 10.1021/acs.biochem.6b00669] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
18
Hua C, Baldansuren A, Tuna F, Collison D, D'Alessandro DM. In Situ Spectroelectrochemical Investigations of the Redox-Active Tris[4-(pyridin-4-yl)phenyl]amine Ligand and a Zn(2+) Coordination Framework. Inorg Chem 2016;55:7270-80. [PMID: 27419690 DOI: 10.1021/acs.inorgchem.6b00981] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
19
Oxygen as Acceptor. EcoSal Plus 2016;6. [PMID: 26734697 DOI: 10.1128/ecosalplus.esp-0012-2015] [Citation(s) in RCA: 35] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
20
Yi SM, Taguchi AT, Samoilova RI, O'Malley PJ, Gennis RB, Dikanov SA. Plasticity in the High Affinity Menaquinone Binding Site of the Cytochrome aa3-600 Menaquinol Oxidase from Bacillus subtilis. Biochemistry 2015. [PMID: 26196462 DOI: 10.1021/acs.biochem.5b00528] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
21
Lin MT, Fukazawa R, Miyajima-Nakano Y, Matsushita S, Choi SK, Iwasaki T, Gennis RB. Escherichia coli Auxotroph Host Strains for Amino Acid-Selective Isotope Labeling of Recombinant Proteins. Methods Enzymol 2015;565:45-66. [DOI: 10.1016/bs.mie.2015.05.012] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
22
Hong S, de Almeida W, Taguchi AT, Samoilova R, Gennis RB, O’Malley PJ, Dikanov SA, Crofts AR. The semiquinone at the Qi site of the bc1 complex explored using HYSCORE spectroscopy and specific isotopic labeling of ubiquinone in Rhodobacter sphaeroides via (13)C methionine and construction of a methionine auxotroph. Biochemistry 2014;53:6022-31. [PMID: 25184535 PMCID: PMC4179594 DOI: 10.1021/bi500654y] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2014] [Revised: 09/02/2014] [Indexed: 11/30/2022]
23
Prediction of high- and low-affinity quinol-analogue-binding sites in the aa3 and bo3 terminal oxidases from Bacillus subtilis and Escherichia coli1. Biochem J 2014;461:305-14. [PMID: 24779955 DOI: 10.1042/bj20140082] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
24
Taguchi AT, O'Malley PJ, Wraight CA, Dikanov SA. Conformational differences between the methoxy groups of QA and QB site ubisemiquinones in bacterial reaction centers: a key role for methoxy group orientation in modulating ubiquinone redox potential. Biochemistry 2013;52:4648-55. [PMID: 23745576 DOI: 10.1021/bi400489b] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
25
Dikanov SA. Resolving protein-semiquinone interactions by two-dimensional ESEEM spectroscopy. ELECTRON PARAMAGNETIC RESONANCE 2012. [DOI: 10.1039/9781849734837-00103] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
PrevPage 1 of 1 1Next
© 2004-2024 Baishideng Publishing Group Inc. All rights reserved. 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA