1
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Puigcerver J, Zamora-Gallego JM, Marin-Luna M, Martinez-Cuezva A, Berna J. Urea-Based [2]Rotaxanes as Effective Phase-Transfer Organocatalysts: Hydrogen-Bonding Cooperative Activation Enabled by the Mechanical Bond. J Am Chem Soc 2024. [PMID: 38975636 DOI: 10.1021/jacs.4c06630] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/09/2024]
Abstract
We finely designed a set of [2]rotaxanes with urea threads and tested them as hydrogen-bonding phase-transfer catalysts in two different nucleophilic substitutions requiring the activation of the reactant fluoride anion. The [2]rotaxane bearing a fluorinated macrocycle and a fluorine-containing urea thread displayed significantly enhanced catalytic activity in comparison with the combination of both noninterlocked components. This fact highlights the notably beneficial role of the mechanical bond, cooperatively activating the processes through hydrogen-bonding interactions.
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Affiliation(s)
- Julio Puigcerver
- Departamento de Quimica Organica, Facultad de Quimica, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia, E-30100 Murcia, Spain
| | - Jose M Zamora-Gallego
- Departamento de Quimica Organica, Facultad de Quimica, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia, E-30100 Murcia, Spain
| | - Marta Marin-Luna
- Departamento de Quimica Organica, Facultad de Quimica, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia, E-30100 Murcia, Spain
| | - Alberto Martinez-Cuezva
- Departamento de Quimica Organica, Facultad de Quimica, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia, E-30100 Murcia, Spain
| | - Jose Berna
- Departamento de Quimica Organica, Facultad de Quimica, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia, E-30100 Murcia, Spain
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2
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Solra M, Kapila R, Das S, Bhatt P, Rana S. Transient Metallo-Lipidoid Assemblies Amplify Covalent Catalysis of Aqueous and Non-Aqueous Reactions. Angew Chem Int Ed Engl 2024; 63:e202400348. [PMID: 38315883 DOI: 10.1002/anie.202400348] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2024] [Revised: 02/02/2024] [Accepted: 02/05/2024] [Indexed: 02/07/2024]
Abstract
Dissipative supramolecular assemblies are hallmarks of living systems, contributing to their complex, dynamic structures and emerging functions. Living cells can spatiotemporally control diverse biochemical reactions in membrane compartments and condensates, regulating metabolite levels, signal transduction or remodeling of the cytoskeleton. Herein, we constructed membranous compartments using self-assembly of lipid-like amphiphiles (lipidoid) in aqueous medium. The new double-tailed lipidoid features Cu(II) coordinated with a tetravalent chelator that dictates the binding of two amphiphilic ligands in cis-orientation. Hydrophobic interactions between the lipidoids coupled with intermolecular hydrogen bonding led to a well-defined bilayer vesicle structure. Oil-soluble SNAr reaction is efficiently upregulated in the hydrophobic cavity, acting as a catalytic crucible. The modular system allows easy incorporation of exposed primary amine groups, which augments the catalysis of retro aldol and C-N bond formation reactions. Moreover, a higher-affinity chelator enables consumption of the Cu(II) template leveraging the differential thermodynamic stability, which allows a controllable lifetime of the vesicular assemblies. Concomitant temporal upregulation of the catalytic reactions could be tuned by the metal ion concentration. This work offers new possibilities for metal ion-mediated dynamic supramolecular systems, opening up a massive repertoire of functionally active dynamic "life-like" materials.
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Affiliation(s)
- Manju Solra
- Materials Research Centre, Division of Chemical Sciences, Indian Institute of Science, C. V. Raman Road, Bangalore, 560012, India
| | - Rohit Kapila
- Materials Research Centre, Division of Chemical Sciences, Indian Institute of Science, C. V. Raman Road, Bangalore, 560012, India
| | - Sourav Das
- Materials Research Centre, Division of Chemical Sciences, Indian Institute of Science, C. V. Raman Road, Bangalore, 560012, India
| | - Preeti Bhatt
- Materials Research Centre, Division of Chemical Sciences, Indian Institute of Science, C. V. Raman Road, Bangalore, 560012, India
| | - Subinoy Rana
- Materials Research Centre, Division of Chemical Sciences, Indian Institute of Science, C. V. Raman Road, Bangalore, 560012, India
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3
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Kauerhof D, Riebe J, Vonnemann CJ, Thiele M, Jansen D, Niemeyer J. Heterobifunctional rotaxanes featuring two chiral subunits - synthesis and application in asymmetric organocatalysis. Chem Commun (Camb) 2024; 60:2393-2396. [PMID: 38323328 DOI: 10.1039/d3cc05482a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2024]
Abstract
Rotaxanes can serve as scaffolds for the generation of bifunctional catalysts. We have now generated acid-base functionalized rotaxanes featuring two chiral subunits. The mechanical bond leads to increased reaction rates and also to strongly altered enantioselectivites in comparison to the non-interlocked control catalysts.
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Affiliation(s)
- Dana Kauerhof
- Faculty of Chemistry (Organic Chemistry) and Centre of Nanointegration Duisburg-Essen (CENIDE), University of Duisburg-Essen, Universitätsstr. 7, 45141 Essen, Germany.
| | - Jan Riebe
- Faculty of Chemistry (Organic Chemistry) and Centre of Nanointegration Duisburg-Essen (CENIDE), University of Duisburg-Essen, Universitätsstr. 7, 45141 Essen, Germany.
| | - Christoph J Vonnemann
- Faculty of Chemistry (Organic Chemistry) and Centre of Nanointegration Duisburg-Essen (CENIDE), University of Duisburg-Essen, Universitätsstr. 7, 45141 Essen, Germany.
| | - Maike Thiele
- Faculty of Chemistry (Organic Chemistry) and Centre of Nanointegration Duisburg-Essen (CENIDE), University of Duisburg-Essen, Universitätsstr. 7, 45141 Essen, Germany.
| | - Dennis Jansen
- Faculty of Chemistry (Organic Chemistry) and Centre of Nanointegration Duisburg-Essen (CENIDE), University of Duisburg-Essen, Universitätsstr. 7, 45141 Essen, Germany.
| | - Jochen Niemeyer
- Faculty of Chemistry (Organic Chemistry) and Centre of Nanointegration Duisburg-Essen (CENIDE), University of Duisburg-Essen, Universitätsstr. 7, 45141 Essen, Germany.
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4
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Bąk KM, Trzaskowski B, Chmielewski MJ. Anion-templated synthesis of a switchable fluorescent [2]catenane with sulfate sensing capability. Chem Sci 2024; 15:1796-1809. [PMID: 38303949 PMCID: PMC10829038 DOI: 10.1039/d3sc05086f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2023] [Accepted: 12/16/2023] [Indexed: 02/03/2024] Open
Abstract
Anion templation strategies have facilitated the synthesis of various catenane and rotaxane hosts capable of strong and selective binding of anions in competitive solvents. However, this approach has primarily relied on positively charged precursors, limiting the structural diversity and the range of potential applications of the anion-templated mechanically interlocked molecules. Here we demonstrate the synthesis of a rare electroneutral [2]catenane using a powerful, doubly charged sulfate template and a complementary diamidocarbazole-based hydrogen bonding precursor. Owing to the unique three-dimensional hydrogen bonding cavity and the embedded carbazole fluorophores, the resulting catenane receptor functions as a sensitive fluorescent turn-ON sensor for the highly hydrophilic sulfate, even in the presence of a large excess of water. Importantly, the [2]catenane exhibits enhanced binding affinity and selectivity for sulfate over its parent macrocycle and other acyclic diamidocarbazole-based receptors. We demonstrate also, for the first time, that the co-conformation of the catenane may be controlled by reversible acid/base induced protonation and deprotonation of the anionic template, SO42-. This approach pioneers a new strategy to induce molecular motion of interlocked components using switchable anionic templates.
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Affiliation(s)
- Krzysztof M Bąk
- Faculty of Chemistry, Biological and Chemical Research Centre, University of Warsaw Żwirki i Wigury 101 02-089 Warsaw Poland
| | - Bartosz Trzaskowski
- Centre of New Technologies, University of Warsaw Banacha 2c 02-097 Warsaw Poland
| | - Michał J Chmielewski
- Faculty of Chemistry, Biological and Chemical Research Centre, University of Warsaw Żwirki i Wigury 101 02-089 Warsaw Poland
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5
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Soto MA, MacLachlan MJ. Responsive macrocyclic and supramolecular structures powered by platinum. Chem Sci 2024; 15:431-441. [PMID: 38179527 PMCID: PMC10763547 DOI: 10.1039/d3sc05524h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2023] [Accepted: 11/30/2023] [Indexed: 01/06/2024] Open
Abstract
Humankind's manipulation of platinum dates back more than two millennia to burial objects. Since then, its use has evolved from purely decorative purposes in jewelry to more functional applications such as in catalysts, pharmaceuticals, and bioimaging agents. Platinum offers a range of properties arguably unmatched by any other metal, including electroactivity, photoluminescence, chromic behaviour, catalysis, redox reactivity, photoreactivity, and stimuli-controlled intermetallic interactions. The vast body of knowledge generated by the exploration of these and other properties of platinum has recently merged with other areas of chemistry such as supramolecular and host-guest chemistry. This has shown us that platinum can incorporate its responsive character into supramolecular assemblies (e.g., macrocycles and polymers) to produce materials with tailorable functions and responses. In this Perspective Article, we cover some platinum-powered supramolecular structures reported by us and others, hoping to inspire new and exciting discoveries in the field.
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Affiliation(s)
- Miguel A Soto
- Department of Chemistry, University of British Columbia 2036 Main Mall Vancouver British Columbia V6T 1Z1 Canada
| | - Mark J MacLachlan
- Department of Chemistry, University of British Columbia 2036 Main Mall Vancouver British Columbia V6T 1Z1 Canada
- Quantum Matter Institute, University of British Columbia 2355 East Mall Vancouver British Columbia V6T 1Z4 Canada
- WPI Nano Life Science Institute, Kanazawa University Kanazawa 920-1192 Japan
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6
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Nandi M, Bej S, Jana T, Ghosh P. From construction to application of a new generation of interlocked molecules composed of heteroditopic wheels. Chem Commun (Camb) 2023. [PMID: 38015500 DOI: 10.1039/d3cc03778a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2023]
Abstract
Over the last few decades, research on mechanically interlocked molecules has significantly evolved owing to their unique structural features and interesting properties. A substantial percentage of the reported works have focused on the synthetic strategies, leading to the preparation of functional MIMs for their applications in the chemical, materials, and biomedical sciences. Importantly, various macrocyclic wheels with specific heteroditopicity (including phenanthroline, amide, amine, oxy-ether, isophthalamide, calixarene and triazole) and threading axles (bipyridine, phenanthroline, pyridinium, triazolium, etc.) have been designed to synthesize targeted multifunctional mononuclear/multinuclear pseudorotaxanes, rotaxanes and catenanes. The structural uniqueness of these interlocked systems is advantageous owing to the presence of mechanical bonds with specific three-dimensional cavities. Furthermore, their multi-functionalities and preorganised structural entities exhibit a high potential for versatile applications, like switching, shuttling, dynamic properties, recognition and sensing. In this feature article, we describe some of the most recent advances in the construction and chemical behaviour of a new generation of interlocked molecules, primarily focusing on heteroditopic wheels and their applications in different directions of the modern research area. Furthermore, we outline the future prospects and significant perspectives of the new generation heteroditopic wheel based interlocked molecules in different emerging areas of science.
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Affiliation(s)
- Mandira Nandi
- School of Chemical Sciences, Indian Association for the Cultivation of Science, Kolkata 700032, India.
| | - Somnath Bej
- School of Chemical Sciences, Indian Association for the Cultivation of Science, Kolkata 700032, India.
| | - Tarun Jana
- School of Chemical Sciences, Indian Association for the Cultivation of Science, Kolkata 700032, India.
| | - Pradyut Ghosh
- School of Chemical Sciences, Indian Association for the Cultivation of Science, Kolkata 700032, India.
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7
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Anghel CC, Cucuiet TA, Hădade ND, Grosu I. Active-metal template clipping synthesis of novel [2]rotaxanes. Beilstein J Org Chem 2023; 19:1776-1784. [PMID: 38033450 PMCID: PMC10682515 DOI: 10.3762/bjoc.19.130] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2023] [Accepted: 11/09/2023] [Indexed: 12/02/2023] Open
Abstract
Mechanically interlocked molecules (MIMs) have been important synthetic targets in supramolecular chemistry due to their beautiful structures and intriguing properties. We present herein a new synthetic strategy to access [2]rotaxanes, namely active-metal template clipping. We discuss the design of the target [2]rotaxanes, synthesis and characterization of the axle, macrocycle precursors and macrocycles as well as preparation of the final [2]rotaxanes by active template copper(I)-catalyzed alkyne-azide cycloaddition (CuAAC) as key step of the synthesis. HRMS and NMR experiments have been performed to confirm the formation of the interlocked structures.
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Affiliation(s)
- Cătălin C Anghel
- Babeș-Bolyai University, Faculty of Chemistry and Chemical Engineering, Supramolecular Organic and Organometallic Chemistry Centre, 11 Arany Janos Str., RO-400028-Cluj-Napoca, Romania
- University of Bucharest, Faculty of Chemistry; Department of Organic Chemistry, Biochemistry and Catalysis, Research Centre of Applied Organic Chemistry, 90-92 Panduri Street, RO-050663 Bucharest, Romania
| | - Teodor A Cucuiet
- Babeș-Bolyai University, Faculty of Chemistry and Chemical Engineering, Supramolecular Organic and Organometallic Chemistry Centre, 11 Arany Janos Str., RO-400028-Cluj-Napoca, Romania
| | - Niculina D Hădade
- Babeș-Bolyai University, Faculty of Chemistry and Chemical Engineering, Supramolecular Organic and Organometallic Chemistry Centre, 11 Arany Janos Str., RO-400028-Cluj-Napoca, Romania
| | - Ion Grosu
- Babeș-Bolyai University, Faculty of Chemistry and Chemical Engineering, Supramolecular Organic and Organometallic Chemistry Centre, 11 Arany Janos Str., RO-400028-Cluj-Napoca, Romania
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8
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Tseng IC, Zhang MX, Kang SL, Chiu SH. An Anion-Switchable Dual-Function Rotaxane Catalyst. Angew Chem Int Ed Engl 2023; 62:e202309889. [PMID: 37670563 DOI: 10.1002/anie.202309889] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2023] [Revised: 08/22/2023] [Accepted: 09/05/2023] [Indexed: 09/07/2023]
Abstract
In situ switching of the associated anions of a rotaxane catalyst between Cl- and TFPB- exposes its dialkylammonium and imidazolium stations, respectively, thereby selectively catalyzing the reactions of a mixture of trans-cinnamaldehyde and an aliphatic thiol to yield the Michael adduct and the thioacetal product, respectively.
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Affiliation(s)
- I-Cheng Tseng
- Department of Chemistry and Center for Emerging Material and Advanced Devices, National Taiwan University, No. 1, Sec. 4, Roosevelt Road, Taipei, Taiwan
| | - Min-Xuan Zhang
- Department of Chemistry and Center for Emerging Material and Advanced Devices, National Taiwan University, No. 1, Sec. 4, Roosevelt Road, Taipei, Taiwan
| | - Shih-Lun Kang
- Department of Chemistry and Center for Emerging Material and Advanced Devices, National Taiwan University, No. 1, Sec. 4, Roosevelt Road, Taipei, Taiwan
| | - Sheng-Hsien Chiu
- Department of Chemistry and Center for Emerging Material and Advanced Devices, National Taiwan University, No. 1, Sec. 4, Roosevelt Road, Taipei, Taiwan
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9
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Djemili R, Adrouche S, Durot S, Heitz V. Allosterically Driven Assembly of a Multisite Cage-Based [2]Semirotaxane. J Org Chem 2023; 88:14760-14766. [PMID: 37812736 DOI: 10.1021/acs.joc.3c01381] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/11/2023]
Abstract
The assembly of a [2]semirotaxane from a half-dumbbell endowed with a pyrazine coordination site and a bis-Zn(II) porphyrin cage as a multisite ring is reported. The threading is allosterically driven by the coordination of silver(I) ions to the multiple binding sites of the cage linkers, as shown by NMR studies. Addition of chloride ions destabilizes [2]semirotaxane, leading to its disassembly into its cage and half-dumbbell components.
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Affiliation(s)
- Ryan Djemili
- Laboratoire de Synthèse des Assemblages Moléculaires Multifonctionnels Institut de Chimie de Strasbourg, CNRS/UMR 7177, Université de Strasbourg, 4 rue Blaise Pascal, 67000 Strasbourg, France
| | - Sonia Adrouche
- Laboratoire de Synthèse des Assemblages Moléculaires Multifonctionnels Institut de Chimie de Strasbourg, CNRS/UMR 7177, Université de Strasbourg, 4 rue Blaise Pascal, 67000 Strasbourg, France
| | - Stéphanie Durot
- Laboratoire de Synthèse des Assemblages Moléculaires Multifonctionnels Institut de Chimie de Strasbourg, CNRS/UMR 7177, Université de Strasbourg, 4 rue Blaise Pascal, 67000 Strasbourg, France
| | - Valérie Heitz
- Laboratoire de Synthèse des Assemblages Moléculaires Multifonctionnels Institut de Chimie de Strasbourg, CNRS/UMR 7177, Université de Strasbourg, 4 rue Blaise Pascal, 67000 Strasbourg, France
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10
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Saura-Sanmartin A, Lopez-Sanchez J, Lopez-Leonardo C, Pastor A, Berna J. Exploring the Chemistry of the Mechanical Bond: Synthesis of a [2]Rotaxane through Multicomponent Reactions. JOURNAL OF CHEMICAL EDUCATION 2023; 100:3355-3363. [PMID: 37720524 PMCID: PMC10501439 DOI: 10.1021/acs.jchemed.3c00163] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/28/2023] [Revised: 07/10/2023] [Indexed: 09/19/2023]
Abstract
The synthesis of a [2]rotaxane through three- or five-component coupling reactions has been adapted to an organic chemistry experiment for upper-division students. The experimental procedure addresses the search for the most favorable reaction conditions for the synthesis of the interlocked compound, which is obtained in a yield of up to 71%. Moreover, the interlocked nature of the rotaxane is proven by NMR spectroscopy. The content of the sessions has been designed on the basis of a proactive methodology whereby upper-division undergraduate students have a dynamic role. The laboratory experience not only introduces students to the chemistry of the mechanical bond but also reinforces their previous knowledge of basic organic laboratory procedures and their skills with structural elucidation techniques such as NMR and FT-IR spectroscopies. The experiment has been designed in such a customizable way that both experimental procedures and laboratory material can be adapted to a wide range of undergraduate course curricula.
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Affiliation(s)
- Adrian Saura-Sanmartin
- Departamento de Química
Orgánica, Facultad de Química, Regional Campus of International
Excellence “Campus Mare Nostrum”, Universidad de Murcia, E-30100 Murcia, Spain
| | - Jorge Lopez-Sanchez
- Departamento de Química
Orgánica, Facultad de Química, Regional Campus of International
Excellence “Campus Mare Nostrum”, Universidad de Murcia, E-30100 Murcia, Spain
| | - Carmen Lopez-Leonardo
- Departamento de Química
Orgánica, Facultad de Química, Regional Campus of International
Excellence “Campus Mare Nostrum”, Universidad de Murcia, E-30100 Murcia, Spain
| | - Aurelia Pastor
- Departamento de Química
Orgánica, Facultad de Química, Regional Campus of International
Excellence “Campus Mare Nostrum”, Universidad de Murcia, E-30100 Murcia, Spain
| | - Jose Berna
- Departamento de Química
Orgánica, Facultad de Química, Regional Campus of International
Excellence “Campus Mare Nostrum”, Universidad de Murcia, E-30100 Murcia, Spain
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11
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Tse YC, Au-Yeung HY. Catenane and Rotaxane Synthesis from Cucurbit[6]uril-Mediated Azide-Alkyne Cycloaddition. Chem Asian J 2023; 18:e202300290. [PMID: 37460745 DOI: 10.1002/asia.202300290] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2023] [Revised: 06/29/2023] [Indexed: 08/01/2023]
Abstract
The chemistry of mechanically interlocked molecules (MIMs) such as catenane and rotaxane is full of new opportunities for the presence of a mechanical bond, and the efficient synthesis of these molecules is therefore of fundamental importance in realizing their unique properties and functions. While many different types of preorganizing interactions and covalent bond formation strategies have been exploited in MIMs synthesis, the use of cucurbit[6]uril (CB[6]) in simultaneously templating macrocycle interlocking and catalyzing the covalent formation of the interlocked components is particularly advantageous in accessing high-order catenanes and rotaxanes. In this review, catenane and rotaxane obtained from CB[6]-catalyzed azide-alkyne cycloaddition will be discussed, with special emphasis on the synthetic strategies employed for obtaining complex [n]rotaxanes and [n]catenanes, as well as their properties and functions.
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Affiliation(s)
- Yuen Cheong Tse
- Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong, P. R. China
| | - Ho Yu Au-Yeung
- Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong, P. R. China
- State Key Laboratory of Synthetic Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong, P. R. China
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12
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Liang R, Zhou Q, Li X, Wong MW, Chung LW. A Computational Study on the Reaction Mechanism of Stereocontrolled Synthesis of β-Lactam within [2]Rotaxane. J Org Chem 2023. [PMID: 37257155 DOI: 10.1021/acs.joc.3c00330] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
The macrocycle effect of [2]rotaxane on the highly trans-stereoselective cyclization reaction of N-benzylfumaramide was extensively investigated by various computational methods, including DFT and high-level DLPNO-CCSD(T) methods. Our computational results suggest that the most favorable mechanism of the CsOH-promoted cyclization of the fumaramide into trans-β-lactam within [2]rotaxane initiates with deprotonation of a N-benzyl group of the interlocked fumaramide substrate by CsOH, followed by the trans-selective C-C bond formation and protonation by one amide functional group of the macrocycle. Our distortion/interaction analysis further shows that the uncommon trans-stereoselective cyclization forming β-lactam within the rotaxane may be attributed to a higher distortion energy (mainly from the distortion of the twisted cis-fumaramide conformation enforced by the rotaxane). Our systematic study should give deeper mechanistic insight into the reaction mechanism influenced by a supramolecular host.
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Affiliation(s)
- Rong Liang
- Shenzhen Grubbs Institute, Department of Chemistry and Guangdong Provincial Key Laboratory of Catalysis, Southern University of Science and Technology, Shenzhen 518055, China
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, 117543, Singapore
| | - Qinghai Zhou
- Shenzhen Grubbs Institute, Department of Chemistry and Guangdong Provincial Key Laboratory of Catalysis, Southern University of Science and Technology, Shenzhen 518055, China
- The Education Ministry Key Lab of Resource Chemistry, Joint International Research Laboratory of Resource Chemistry of Ministry of Education, Shanghai Key Laboratory of Rare Earth Functional Materials, Shanghai Frontiers Science Center of Biomimetic Catalysis, College of Chemistry and Materials Science, Shanghai Normal University, Shanghai 200234, China
| | - Xin Li
- Shenzhen Grubbs Institute, Department of Chemistry and Guangdong Provincial Key Laboratory of Catalysis, Southern University of Science and Technology, Shenzhen 518055, China
| | - Ming Wah Wong
- Department of Chemistry, National University of Singapore, 3 Science Drive 3, 117543, Singapore
| | - Lung Wa Chung
- Shenzhen Grubbs Institute, Department of Chemistry and Guangdong Provincial Key Laboratory of Catalysis, Southern University of Science and Technology, Shenzhen 518055, China
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13
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Mo X, Deng Y, Lai SKM, Gao X, Yu HL, Low KH, Guo Z, Wu HL, Au-Yeung HY, Tse ECM. Mechanical Interlocking Enhances the Electrocatalytic Oxygen Reduction Activity and Selectivity of Molecular Copper Complexes. J Am Chem Soc 2023; 145:6087-6099. [PMID: 36853653 DOI: 10.1021/jacs.2c10988] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/01/2023]
Abstract
Efficient O2 reduction reaction (ORR) for selective H2O generation enables advanced fuel cell technology. Nonprecious metal catalysts are viable and attractive alternatives to state-of-the-art Pt-based materials that are expensive. Cu complexes inspired by Cu-containing O2 reduction enzymes in nature are yet to reach their desired ORR catalytic performance. Here, the concept of mechanical interlocking is introduced to the ligand architecture to enforce dynamic spatial restriction on the Cu coordination site. Interlocked catenane ligands could govern O2 binding mode, promote electron transfer, and facilitate product elimination. Our results show that ligand interlocking as a catenane steers the ORR selectivity to H2O as the major product via the 4e- pathway, rivaling the selectivity of Pt, and boosts the onset potential by 130 mV, the mass activity by 1.8 times, and the turnover frequency by 1.5 fold as compared to the noninterlocked counterpart. Our Cu catenane complex represents one of the first examples to take advantage of mechanical interlocking to afford electrocatalysts with enhanced activity and selectivity. The mechanistic insights gained through this integrated experimental and theoretical study are envisioned to be valuable not just to the area of ORR energy catalysis but also with broad implications on interlocked metal complexes that are of critical importance to the general fields in redox reactions involving proton-coupled electron transfer steps.
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Affiliation(s)
- Xiaoyong Mo
- Department of Chemistry, HKU-CAS Joint Laboratory of New Materials, University of Hong Kong, Hong Kong, China
| | - Yulin Deng
- Department of Chemistry, HKU-CAS Joint Laboratory of New Materials, University of Hong Kong, Hong Kong, China
| | - Samuel Kin-Man Lai
- Department of Chemistry, HKU-CAS Joint Laboratory of New Materials, University of Hong Kong, Hong Kong, China
| | - Xutao Gao
- Department of Chemistry, HKU-CAS Joint Laboratory of New Materials, University of Hong Kong, Hong Kong, China
| | - Hung-Ling Yu
- Center for Condensed Matter Sciences, National Taiwan University, Taipei 10617, Taiwan
- Center of Atomic Initiative for New Materials, National Taiwan University, Taipei 10617, Taiwan
| | - Kam-Hung Low
- Department of Chemistry, HKU-CAS Joint Laboratory of New Materials, University of Hong Kong, Hong Kong, China
| | - Zhengxiao Guo
- Department of Chemistry, HKU-CAS Joint Laboratory of New Materials, University of Hong Kong, Hong Kong, China
- HKU Zhejiang Institute of Research and Innovation, Hangzhou 311305, People's Republic of China
| | - Heng-Liang Wu
- Center for Condensed Matter Sciences, National Taiwan University, Taipei 10617, Taiwan
- Center of Atomic Initiative for New Materials, National Taiwan University, Taipei 10617, Taiwan
| | - Ho Yu Au-Yeung
- Department of Chemistry, HKU-CAS Joint Laboratory of New Materials, University of Hong Kong, Hong Kong, China
- State Key Laboratory of Synthetic Chemistry, University of Hong Kong, Hong Kong, China
| | - Edmund C M Tse
- Department of Chemistry, HKU-CAS Joint Laboratory of New Materials, University of Hong Kong, Hong Kong, China
- HKU Zhejiang Institute of Research and Innovation, Hangzhou 311305, People's Republic of China
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14
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Sakata Y, Nakamura R, Hibi T, Akine S. Speed Tuning of the Formation/Dissociation of a Metallorotaxane. Angew Chem Int Ed Engl 2023; 62:e202217048. [PMID: 36628483 DOI: 10.1002/anie.202217048] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2022] [Revised: 01/05/2023] [Accepted: 01/10/2023] [Indexed: 01/12/2023]
Abstract
Switching between the formation/dissociation of rotaxanes is important to control the function of various types of rotaxane-based materials. We have developed a convenient and simple strategy, the so-called "accelerator addition", to make a static rotaxane dynamic without apparently affecting the chemical structure. As an interlocked molecule that enables tuning of the formation/dissociation speed, a metallorotaxane was quantitatively generated by the complexation of a triptycene-based dumbbell-shaped mononuclear complex, [PdL2 ]2+ (L=2,3-diaminotriptycene), with 27C9. As a result of the inertness of the Pd2+ -based coordination structure, the metallorotaxane was slowly formed (the static state). This rotaxane formation was accelerated 27 times simply by adding Br- as an accelerator (the dynamic state). A similar drastic acceleration was also demonstrated during the dissociation process when Cs+ was added to the metallorotaxane to form the free axle [PdL2 ]2+ and the 27C9-Cs+ complex.
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Affiliation(s)
- Yoko Sakata
- Graduate School of Natural Science and Technology, Kanazawa University Kakuma-machi, Kanazawa, 920-1192, Japan.,Nano Life Science Institute (WPI-NanoLSI), Kanazawa University Kakuma-machi, Kanazawa, 920-1192, Japan
| | - Ryosuke Nakamura
- Graduate School of Natural Science and Technology, Kanazawa University Kakuma-machi, Kanazawa, 920-1192, Japan
| | - Toshihiro Hibi
- Graduate School of Natural Science and Technology, Kanazawa University Kakuma-machi, Kanazawa, 920-1192, Japan
| | - Shigehisa Akine
- Graduate School of Natural Science and Technology, Kanazawa University Kakuma-machi, Kanazawa, 920-1192, Japan.,Nano Life Science Institute (WPI-NanoLSI), Kanazawa University Kakuma-machi, Kanazawa, 920-1192, Japan
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15
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Feng QY, Tong S, Vatsadze SZ, Wang MX. C-symmetric aza-crown ethers as chiral shift agents for amines and amino acid derivatives. Tetrahedron 2022. [DOI: 10.1016/j.tet.2022.133207] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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16
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Feng QY, Mao YQ, Wang MX, Tong S. Chiral Crown Ethers Accessed from Catalytic Enantioselective Desymmetrization Reactions. Org Lett 2022; 24:7107-7112. [PMID: 36148969 DOI: 10.1021/acs.orglett.2c02688] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A diversity of unprecedented chiral aza-crown ethers were synthesized straightforwardly from readily available and inexpensive aza-crown ethers. Catalyzed by a chiral phosphoric acid, desymmetrization of an array of symmetric N-arylated aza-crown ethers through tert-amino reaction proceeded efficiently under mild conditions to produce novel tetrahydroquinoline-fused aza-crown ethers in good to excellent yields with up to 96% ee. Our strategy opens a new route to functionalized chiral crown ethers.
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Affiliation(s)
- Qi-Yun Feng
- MOE Key Laboratory of Bioorganic Phosphorus and Chemical Biology, Department of Chemistry, Tsinghua University, Beijing 100084, China
| | - Yu-Qi Mao
- MOE Key Laboratory of Bioorganic Phosphorus and Chemical Biology, Department of Chemistry, Tsinghua University, Beijing 100084, China
| | - Mei-Xiang Wang
- MOE Key Laboratory of Bioorganic Phosphorus and Chemical Biology, Department of Chemistry, Tsinghua University, Beijing 100084, China
| | - Shuo Tong
- MOE Key Laboratory of Bioorganic Phosphorus and Chemical Biology, Department of Chemistry, Tsinghua University, Beijing 100084, China
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17
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Kundu S, Mondal D, Elramadi E, Valiyev I, Schmittel M. Parallel Allosteric Inhibition of Shuttling Motion and Catalysis in a Silver(I)-loaded [2]Rotaxane. Org Lett 2022; 24:6609-6613. [PMID: 36053156 DOI: 10.1021/acs.orglett.2c02609] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
A dynamic silver(I)-loaded [2]rotaxane shuttle (k298 = 135 kHz) was converted allosterically into a conformationally restricted [2]rotaxane due to the creation of a bulky imine in the center of the axle component. Only the dynamic silver(I)-loaded [2]rotaxane was able to catalyze a 6-endo-cyclization reaction, whereas the static one was catalytically quiet. The mechanism of catalyst deactivation was elucidated.
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Affiliation(s)
- Sohom Kundu
- Center of Micro- and Nanochemistry and (Bio)Technology, Universität Siegen, Organische Chemie I, Adolf-Reichwein-Str. 2, D-57068 Siegen, Germany
| | - Debabrata Mondal
- Center of Micro- and Nanochemistry and (Bio)Technology, Universität Siegen, Organische Chemie I, Adolf-Reichwein-Str. 2, D-57068 Siegen, Germany
| | - Emad Elramadi
- Center of Micro- and Nanochemistry and (Bio)Technology, Universität Siegen, Organische Chemie I, Adolf-Reichwein-Str. 2, D-57068 Siegen, Germany
| | - Isa Valiyev
- Center of Micro- and Nanochemistry and (Bio)Technology, Universität Siegen, Organische Chemie I, Adolf-Reichwein-Str. 2, D-57068 Siegen, Germany
| | - Michael Schmittel
- Center of Micro- and Nanochemistry and (Bio)Technology, Universität Siegen, Organische Chemie I, Adolf-Reichwein-Str. 2, D-57068 Siegen, Germany
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18
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Nandi M, Bej S, Ghosh P. NDI-integrated rotaxane/catenane and their interactions with anions. Dalton Trans 2022; 51:13507-13514. [PMID: 35997084 DOI: 10.1039/d2dt01908f] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
Complexation of alkali and alkaline earth metal ions with the heteroditopic Phen-ester oxy-ether macrocyclic wheel (PhenMC) is established for the synthesis of interlocked molecular systems. The single crystal X-ray structure of Na-bound PhenMC confirms the hexacoordinated geometry around the Na ion in the macrocycle. Further, Ca-ion-bound PhenMC (Ca-PhenMC) is explored with a fluorophoric azide-terminated NDI (naphthalene diimide) axle (NDIAz) for the synthesis of fluorophoric [2]rotaxane (NDIROT) and [2]catenane (NDICAT) via Cu(I)-catalyzed cycloaddition reaction. Characterizations of these two new interlocked molecular systems are performed by ESI-MS, NMR, UV-vis and PL spectroscopic studies wherever applicable. Moreover, the new molecular systems are explored towards anion sensing applications via colorimetric, UV-vis-NIR, PL and other spectroscopic studies.
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Affiliation(s)
- Mandira Nandi
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A & 2B Raja S. C. Mullick Road, Kolkata 700032, India.
| | - Somnath Bej
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A & 2B Raja S. C. Mullick Road, Kolkata 700032, India.
| | - Pradyut Ghosh
- School of Chemical Sciences, Indian Association for the Cultivation of Science, 2A & 2B Raja S. C. Mullick Road, Kolkata 700032, India.
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19
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Saura-Sanmartin A, Pastor A, Martinez-Cuezva A, Cutillas-Font G, Alajarin M, Berna J. Mechanically interlocked molecules in metal-organic frameworks. Chem Soc Rev 2022; 51:4949-4976. [PMID: 35612363 DOI: 10.1039/d2cs00167e] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Mechanically interlocked molecules (MIMs) have great potential in the development of molecular machinery due to their intercomponent dynamics. The incorporation of these molecules in a condensed phase makes it possible to take advantage of the control of the motion of the components at the macroscopic level. Metal-organic frameworks (MOFs) are postulated as ideal supports for intertwined molecules. This review covers the chemistry of the mechanical bond incorporated into metal-organic frameworks from the seminal studies to the latest published advances. We first describe some fundamental concepts of MIMs and MOFs. Next, we summarize the advances in the incorporation of rotaxanes and catenanes inside MOF matrices. Finally, we conclude by showing the study of the rotaxane dynamics in MOFs and the operation of some stimuli-responsive MIMs within MOFs. In addition to emphasising some selected examples, we offer a critical opinion on the state of the art of this research field, remarking the key points on which the future of these systems should be focused.
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Affiliation(s)
- Adrian Saura-Sanmartin
- Departamento de Química Orgánica, Facultad de Química, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia, E-30100, Murcia, Spain.
| | - Aurelia Pastor
- Departamento de Química Orgánica, Facultad de Química, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia, E-30100, Murcia, Spain.
| | - Alberto Martinez-Cuezva
- Departamento de Química Orgánica, Facultad de Química, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia, E-30100, Murcia, Spain.
| | - Guillermo Cutillas-Font
- Departamento de Química Orgánica, Facultad de Química, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia, E-30100, Murcia, Spain.
| | - Mateo Alajarin
- Departamento de Química Orgánica, Facultad de Química, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia, E-30100, Murcia, Spain.
| | - Jose Berna
- Departamento de Química Orgánica, Facultad de Química, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia, E-30100, Murcia, Spain.
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20
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Howlader P, Schmittel M. Heteroleptic metallosupramolecular aggregates /complexation for supramolecular catalysis. Beilstein J Org Chem 2022; 18:597-630. [PMID: 35673407 PMCID: PMC9152274 DOI: 10.3762/bjoc.18.62] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2022] [Accepted: 05/11/2022] [Indexed: 12/25/2022] Open
Abstract
Supramolecular catalysis is reviewed with an eye on heteroleptic aggregates/complexation. Since most of the current metallosupramolecular catalytic systems are homoleptic in nature, the idea of breaking/reducing symmetry has ignited a vivid search for heteroleptic aggregates that are made up by different components. Their higher degree of functional diversity and structural heterogeneity allows, as demonstrated by Nature by the multicomponent ATP synthase motor, a more detailed and refined configuration of purposeful machinery. Furthermore, (metallo)supramolecular catalysis is shown to extend beyond the single "supramolecular unit" and to reach far into the field and concepts of systems chemistry and information science.
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Affiliation(s)
- Prodip Howlader
- Center of Micro- and Nanochemistry and (Bio)Technology, Universität Siegen, Organische Chemie I, Adolf-Reichwein-Str. 2, D-57068 Siegen, Germany
| | - Michael Schmittel
- Center of Micro- and Nanochemistry and (Bio)Technology, Universität Siegen, Organische Chemie I, Adolf-Reichwein-Str. 2, D-57068 Siegen, Germany
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21
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Li X, Xie J, Du Z, Yu R, Jia J, Chen Z, Zhu K. 2D and 3D metal-organic frameworks constructed with a mechanically rigidified [3]rotaxane ligand. Chem Commun (Camb) 2022; 58:5829-5832. [PMID: 35388851 DOI: 10.1039/d2cc01198k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A mechanically interlocked [3]rotaxane was newly designed, synthesized, and employed as a ligand for constructing metal-organic frameworks (MOFs). The nano-confinement by macrocycles forces the soft bis-isophthalate axle into a pseudo-rigid conformation and coordinates to zinc(II) ions, affording a two- or three-dimensional MOF under controlled conditions. The 2D MOF exhibits a neutral framework with a periodic puckering sheet structure, while an anionic framework with a pts topology was observed for the 3D MOF. The phase purity of both bulk materials was confirmed by powder X-ray diffraction. Thermogravimetric analysis reveals that both materials are stable up to 250 °C. The success of applying mechanical bonds to rigidify flexible ligands provides new insights for the design of metal-organic frameworks.
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Affiliation(s)
- Xia Li
- School of Chemistry, Sun Yat-Sen University, Guangzhou, 510275, P. R. China.
| | - Jialin Xie
- School of Chemistry, Sun Yat-Sen University, Guangzhou, 510275, P. R. China.
| | - Zhenglin Du
- School of Chemistry, Sun Yat-Sen University, Guangzhou, 510275, P. R. China.
| | - Ruiyang Yu
- School of Chemistry, Sun Yat-Sen University, Guangzhou, 510275, P. R. China.
| | - Jianhua Jia
- School of Chemistry, Sun Yat-Sen University, Guangzhou, 510275, P. R. China.
| | - Zhong Chen
- Department of Orthopedics, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou 510120, P. R. China.
| | - Kelong Zhu
- School of Chemistry, Sun Yat-Sen University, Guangzhou, 510275, P. R. China.
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22
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Krajnc M, Niemeyer J. BINOL as a chiral element in mechanically interlocked molecules. Beilstein J Org Chem 2022; 18:508-523. [PMID: 35601990 PMCID: PMC9086503 DOI: 10.3762/bjoc.18.53] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2022] [Accepted: 04/22/2022] [Indexed: 12/17/2022] Open
Abstract
In this minireview we present the use of the axially chiral 1,1'-binaphthyl-2,2'-diol (BINOL) unit as a stereogenic element in mechanically interlocked molecules (MIMs). We describe the synthesis and properties of such BINOL-based chiral MIMs, together with their use in further diastereoselective modifications, their application in asymmetric catalysis, and their use in stereoselective chemosensing. Given the growing importance of mechanically interlocked molecules and the key advantages of the privileged chiral BINOL backbone, we believe that this research area will continue to grow and deliver many useful applications in the future.
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Affiliation(s)
- Matthias Krajnc
- Faculty of Chemistry (Organic Chemistry) and Centre of Nanointegration Duisburg-Essen (CENIDE), University of Duisburg-Essen, Universitätsstr. 7, 45141 Essen, Germany
| | - Jochen Niemeyer
- Faculty of Chemistry (Organic Chemistry) and Centre of Nanointegration Duisburg-Essen (CENIDE), University of Duisburg-Essen, Universitätsstr. 7, 45141 Essen, Germany
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23
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Kim D, Gwak G, Han J, Kim D, Jung OS. Structural properties of [Cu(II) 3L 6] cages: bridged polyatomic anion effects on unprecedented efficiency of heterogeneous catechol oxidation. Dalton Trans 2022; 51:5810-5817. [PMID: 35333267 DOI: 10.1039/d2dt00500j] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Self-assembly of CuX2 (X- = BF4-, ClO4-, PF6-, and SbF6-) with a bidentate ethylmethylbis(3-pyridine)silane ligand (L) in the presence of additional polyatomic anions (X' = SiF62- and PF6-) gives rise to single crystals consisting of the X'@[Cu(II)3L6] cage motif. These cages exist as discrete or anion-bridged 3D networks depending on outside anions. The anion-bridged 3D networks interpenetrate in a four-fold fashion, and show, to our best knowledge, the most effective heterogeneous catalysis in 3,5-di-tert-butylcatechol oxidation reaction within 20 min at room temperature. Surprisingly, the heterogeneous catalysis is more effective than its corresponding homogeneous catalysis. Such notable catalytic effects can be explained by the maintenance of 3D inter-cage Cu⋯Cu distance as a catalytic center.
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Affiliation(s)
- Doheon Kim
- Department of Chemistry, Pusan National University, Busan 46241, Republic of Korea.
| | - Geonwoo Gwak
- Department of Chemistry, Pusan National University, Busan 46241, Republic of Korea.
| | - Jihun Han
- Department of Chemistry, Pusan National University, Busan 46241, Republic of Korea.
| | - Dongwon Kim
- Department of Chemistry, Pusan National University, Busan 46241, Republic of Korea.
| | - Ok-Sang Jung
- Department of Chemistry, Pusan National University, Busan 46241, Republic of Korea.
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24
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Tang Y, Luo Y, Xiang J, He Y, Fan Q. Rhodium‐Catalyzed ON‐OFF Switchable Hydrogenation Using a Molecular Shuttle Based on a [2]Rotaxane with a Phosphine Ligand. Angew Chem Int Ed Engl 2022; 61:e202200638. [DOI: 10.1002/anie.202200638] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2022] [Indexed: 12/18/2022]
Affiliation(s)
- Yu‐Ping Tang
- Beijing National Laboratory for Molecular Sciences CAS Key Laboratory of Molecular Recognition and Function Institute of Chemistry Chinese Academy of Sciences (CAS) Beijing 100190 P. R. China
- University of Chinese Academy of Sciences Beijing 100049 P. R. China
| | - Yi‐Er Luo
- Beijing National Laboratory for Molecular Sciences CAS Key Laboratory of Molecular Recognition and Function Institute of Chemistry Chinese Academy of Sciences (CAS) Beijing 100190 P. R. China
- University of Chinese Academy of Sciences Beijing 100049 P. R. China
| | - Jun‐Feng Xiang
- Beijing National Laboratory for Molecular Sciences CAS Key Laboratory of Molecular Recognition and Function Institute of Chemistry Chinese Academy of Sciences (CAS) Beijing 100190 P. R. China
- University of Chinese Academy of Sciences Beijing 100049 P. R. China
| | - Yan‐Mei He
- Beijing National Laboratory for Molecular Sciences CAS Key Laboratory of Molecular Recognition and Function Institute of Chemistry Chinese Academy of Sciences (CAS) Beijing 100190 P. R. China
| | - Qing‐Hua Fan
- Beijing National Laboratory for Molecular Sciences CAS Key Laboratory of Molecular Recognition and Function Institute of Chemistry Chinese Academy of Sciences (CAS) Beijing 100190 P. R. China
- University of Chinese Academy of Sciences Beijing 100049 P. R. China
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25
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Au-Yeung HY, Deng Y. Distinctive features and challenges in catenane chemistry. Chem Sci 2022; 13:3315-3334. [PMID: 35432874 PMCID: PMC8943846 DOI: 10.1039/d1sc05391d] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Accepted: 02/04/2022] [Indexed: 11/21/2022] Open
Abstract
From being an aesthetic molecular object to a building block for the construction of molecular machines, catenanes and related mechanically interlocked molecules (MIMs) continue to attract immense interest in many research areas. Catenane chemistry is closely tied to that of rotaxanes and knots, and involves concepts like mechanical bonds, chemical topology and co-conformation that are unique to these molecules. Yet, because of their different topological structures and mechanical bond properties, there are some fundamental differences between the chemistry of catenanes and that of rotaxanes and knots although the boundary is sometimes blurred. Clearly distinguishing these differences, in aspects of bonding, structure, synthesis and properties, between catenanes and other MIMs is therefore of fundamental importance to understand their chemistry and explore the new opportunities from mechanical bonds.
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Affiliation(s)
- Ho Yu Au-Yeung
- Department of Chemistry, The University of Hong Kong Pokfulam Road Hong Kong P. R. China
- State Key Laboratory of Synthetic Chemistry, The University of Hong Kong Pokfulam Road Hong Kong P. R. China
| | - Yulin Deng
- Department of Chemistry, The University of Hong Kong Pokfulam Road Hong Kong P. R. China
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26
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Maynard JRJ, Galmés B, Stergiou AD, Symes MD, Frontera A, Goldup SM. Anion-π Catalysis Enabled by the Mechanical Bond. Angew Chem Int Ed Engl 2022; 61:e202115961. [PMID: 35040543 PMCID: PMC9303940 DOI: 10.1002/anie.202115961] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2021] [Indexed: 12/13/2022]
Abstract
We report a series of rotaxane‐based anion–π catalysts in which the mechanical bond between a bipyridine macrocycle and an axle containing an NDI unit is intrinsic to the activity observed, including a [3]rotaxane that catalyses an otherwise disfavoured Michael addition in >60 fold selectivity over a competing decarboxylation pathway that dominates under Brønsted base conditions. The results are rationalized by detailed experimental investigations, electrochemical and computational analysis.
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Affiliation(s)
- John R J Maynard
- Chemistry, University of Southampton, Highfield, Southampton, S017 1BJ, UK
| | - Bartomeu Galmés
- Department of Chemistry, Universitat de les Illes Balears, Crta de Valldemossa km 7.5, 07122, Palma de Mallorca, Baleares, Spain
| | - Athanasios D Stergiou
- WestCHEM School of Chemistry, University of Glasgow, Joseph Black Building, University Avenue, Glasgow, G12 8QQ, UK
| | - Mark D Symes
- WestCHEM School of Chemistry, University of Glasgow, Joseph Black Building, University Avenue, Glasgow, G12 8QQ, UK
| | - Antonio Frontera
- Department of Chemistry, Universitat de les Illes Balears, Crta de Valldemossa km 7.5, 07122, Palma de Mallorca, Baleares, Spain
| | - Stephen M Goldup
- Chemistry, University of Southampton, Highfield, Southampton, S017 1BJ, UK
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27
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Ferrocene-Containing Pseudorotaxanes in Crystals: Aromatic Interactions with Hammett Correlation. MOLECULES (BASEL, SWITZERLAND) 2022; 27:molecules27051745. [PMID: 35268846 PMCID: PMC8911870 DOI: 10.3390/molecules27051745] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/30/2021] [Revised: 02/28/2022] [Accepted: 03/05/2022] [Indexed: 11/17/2022]
Abstract
Single crystals of pseudorotaxanes, [(FcCH2NH2CH2Ar)(DB24C8)][PF6] (DB24C8 = dibenzo[24]crown-8, Fc = Fe(C5H4)(C5H5), Ar = -C6H3-3,4-Cl2, -C6H3-3,4-F2, -C6H4-4-F, -C6H4-4-Cl, -C6H4-4-Br, -C6H3-3-F-4-Me, -C6H4-4-I) and [(FcCH2NH2CH2C6H4-4-Me)(DB24C8)][Ni(dmit)2] (dmit = 1,3-dithiole-2,4,5-dithiolate), were obtained from solutions containing DB24C8 and ferrocenylmethyl(arylmethyl)ammonium. X-ray crystallographic analyses of the pseudorotaxanes revealed that the aryl ring of the axle moiety and the catechol ring of the macrocyclic component were at close centroid distances and parallel or tilted orientation. The structures with parallel aromatic rings showed correlation of the distances between the centroids to Hammett substituent constants of the aryl groups.
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28
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Tang Y, Luo Y, Xiang J, He Y, Fan Q. Rhodium‐Catalyzed ON‐OFF Switchable Hydrogenation Using a Molecular Shuttle Based on a [2]Rotaxane with a Phosphine Ligand. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202200638] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Yu‐Ping Tang
- Beijing National Laboratory for Molecular Sciences CAS Key Laboratory of Molecular Recognition and Function Institute of Chemistry Chinese Academy of Sciences (CAS) Beijing 100190 P. R. China
- University of Chinese Academy of Sciences Beijing 100049 P. R. China
| | - Yi‐Er Luo
- Beijing National Laboratory for Molecular Sciences CAS Key Laboratory of Molecular Recognition and Function Institute of Chemistry Chinese Academy of Sciences (CAS) Beijing 100190 P. R. China
- University of Chinese Academy of Sciences Beijing 100049 P. R. China
| | - Jun‐Feng Xiang
- Beijing National Laboratory for Molecular Sciences CAS Key Laboratory of Molecular Recognition and Function Institute of Chemistry Chinese Academy of Sciences (CAS) Beijing 100190 P. R. China
- University of Chinese Academy of Sciences Beijing 100049 P. R. China
| | - Yan‐Mei He
- Beijing National Laboratory for Molecular Sciences CAS Key Laboratory of Molecular Recognition and Function Institute of Chemistry Chinese Academy of Sciences (CAS) Beijing 100190 P. R. China
| | - Qing‐Hua Fan
- Beijing National Laboratory for Molecular Sciences CAS Key Laboratory of Molecular Recognition and Function Institute of Chemistry Chinese Academy of Sciences (CAS) Beijing 100190 P. R. China
- University of Chinese Academy of Sciences Beijing 100049 P. R. China
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29
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Heard AW, Suárez JM, Goldup SM. Controlling catalyst activity, chemoselectivity and stereoselectivity with the mechanical bond. Nat Rev Chem 2022; 6:182-196. [PMID: 37117433 DOI: 10.1038/s41570-021-00348-4] [Citation(s) in RCA: 37] [Impact Index Per Article: 18.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 11/25/2021] [Indexed: 12/16/2022]
Abstract
Mechanically interlocked molecules, such as rotaxanes and catenanes, are receiving increased attention as scaffolds for the development of new catalysts, driven by both their increasing accessibility and high-profile examples of the mechanical bond delivering desirable behaviours and properties. In this Review, we survey recent advances in the catalytic applications of mechanically interlocked molecules organized by the effect of the mechanical bond on key catalytic properties, namely, activity, chemoselectivity and stereoselectivity, and focus on how the mechanically bonded structure leads to the observed behaviour. Our aim is to inspire future investigations of mechanically interlocked catalysts, including those outside of the supramolecular community.
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30
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Maynard JRJ, Galmés B, Stergiou A, Symes M, Frontera A, Goldup SM. Anion‐π Catalysis Enabled by the Mechanical Bond. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202115961] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
| | | | | | - Mark Symes
- University of Glasgow Chemistry UNITED KINGDOM
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31
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Elramadi E, Ghosh A, Valiyev I, Biswas P, Paululat T, Schmittel M. Catalytic machinery in motion: Controlling catalysis via speed. Chem Commun (Camb) 2022; 58:8073-8076. [DOI: 10.1039/d2cc02555h] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Three 3-component copper(I)-based slider-on-deck systems served as catalysts for a click reaction showing a higher catalytic activity with increasing sliding speed. Upon addition of brake stones, the motion of the...
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Aizawa T, Akine S, Saiki T, Nakamura T, Nabeshima T. Rotaxane formation by an allosteric pseudomacrocyclic anion receptor utilising kinetically labile copper( i) coordination properties. Dalton Trans 2022; 51:17277-17282. [DOI: 10.1039/d2dt03331c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A pseudomacrocyclic receptor with hydrogen bonding units spontaneously generates a rotaxane with an anionic axle possessing large end groups.
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Affiliation(s)
- Taeko Aizawa
- Faculty of Pure and Applied Sciences and Tsukuba Research Center for Energy Materials Science (TREMS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8571, Japan
| | - Shigehisa Akine
- Graduate School of Natural Science and Technology and WPI Nano Life Science Institute (WPI-NanoLSI), Kanazawa University, Kakuma-machi, Kanazawa 920-1192, Japan
| | - Toshiyuki Saiki
- Faculty of Pure and Applied Sciences and Tsukuba Research Center for Energy Materials Science (TREMS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8571, Japan
| | - Takashi Nakamura
- Faculty of Pure and Applied Sciences and Tsukuba Research Center for Energy Materials Science (TREMS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8571, Japan
| | - Tatsuya Nabeshima
- Faculty of Pure and Applied Sciences and Tsukuba Research Center for Energy Materials Science (TREMS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8571, Japan
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Kwan CS, Ho WKW, Chen Y, Cai Z, Leung KCF. Synthesis of Functional Building Blocks for Type III-B Rotaxane Dendrimer. Polymers (Basel) 2021; 13:polym13223909. [PMID: 34833208 PMCID: PMC8622516 DOI: 10.3390/polym13223909] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2021] [Revised: 11/08/2021] [Accepted: 11/08/2021] [Indexed: 11/16/2022] Open
Abstract
Second-generation type III-B rotaxane dendrons, equipped with succinimide and acetylene functional groups, were synthesized successfully and characterized by NMR spectroscopy and mass spectrometry. A cell viability study of a dendron with a normal cell line of L929 fibroblast cells revealed no obvious cytotoxicity at a range of 5 to 100 μM. The nontoxic properties of the sophisticated rotaxane dendron building blocks provided a choice of bio-compatible macromolecular machines that could be potentially developed into polymeric materials.
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Affiliation(s)
- Chak-Shing Kwan
- State Key Laboratory of Environmental and Biological Analysis, Department of Chemistry, The Hong Kong Baptist University, Kowloon Tong, Kowloon, Hong Kong, China; (C.-S.K.); (Y.C.); (Z.C.)
| | - Watson K.-W. Ho
- Department of Chemistry, The Chinese University of Hong Kong, Shatin, NT, Hong Kong, China;
| | - Yanyan Chen
- State Key Laboratory of Environmental and Biological Analysis, Department of Chemistry, The Hong Kong Baptist University, Kowloon Tong, Kowloon, Hong Kong, China; (C.-S.K.); (Y.C.); (Z.C.)
| | - Zongwei Cai
- State Key Laboratory of Environmental and Biological Analysis, Department of Chemistry, The Hong Kong Baptist University, Kowloon Tong, Kowloon, Hong Kong, China; (C.-S.K.); (Y.C.); (Z.C.)
| | - Ken Cham-Fai Leung
- State Key Laboratory of Environmental and Biological Analysis, Department of Chemistry, The Hong Kong Baptist University, Kowloon Tong, Kowloon, Hong Kong, China; (C.-S.K.); (Y.C.); (Z.C.)
- Correspondence:
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Gauthier M, Waelès P, Coutrot F. Post-Synthetic Macrocyclization of Rotaxane Building Blocks. Chempluschem 2021; 87:e202100458. [PMID: 34811956 DOI: 10.1002/cplu.202100458] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2021] [Revised: 11/11/2021] [Indexed: 11/06/2022]
Abstract
Although not often encountered, cyclic interlocked molecules are appealing molecular targets because of their restrained tridimensional structure which is related to both the cyclic and interlocked shapes. Interlocked molecules such as rotaxane building blocks may be good candidates for post-synthetic intramolecular cyclization if the preservation of the mechanical bond ensures the interlocked architecture throughout the reaction. This is obviously the case if the modification does not involve the cleavage of either the macrocycle's main chain or the encircled part of the axle. However, among the post-synthetic reactions, the chemical linkage between two reactive sites belonging to embedded elements of rotaxanes still consists of an underexploited route to interlocked cyclic molecules. This Review lists the rare examples of macrocyclization through chemical connection between reactive sites belonging to a surrounding macrocycle and/or an encircled axle of interlocked rotaxanes.
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Affiliation(s)
- Maxime Gauthier
- Supramolecular Machines and Architectures Team, IBMM, Univ Montpellier, CNRS, ENSCM, Montpellier, France
| | - Philip Waelès
- Supramolecular Machines and Architectures Team, IBMM, Univ Montpellier, CNRS, ENSCM, Montpellier, France
| | - Frédéric Coutrot
- Supramolecular Machines and Architectures Team, IBMM, Univ Montpellier, CNRS, ENSCM, Montpellier, France
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Guo F, Li K, Wu J, Wang Y, Zhang L. Sliding dynamics of ring chain on a knotted polymer in rotaxane. POLYMER 2021. [DOI: 10.1016/j.polymer.2021.124226] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Borodin O, Shchukin Y, Robertson CC, Richter S, von Delius M. Self-Assembly of Stimuli-Responsive [2]Rotaxanes by Amidinium Exchange. J Am Chem Soc 2021; 143:16448-16457. [PMID: 34559523 PMCID: PMC8517971 DOI: 10.1021/jacs.1c05230] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
![]()
Advances in supramolecular
chemistry are often underpinned by the
development of fundamental building blocks and methods enabling their
interconversion. In this work, we report the use of an underexplored
dynamic covalent reaction for the synthesis of stimuli-responsive
[2]rotaxanes. The formamidinium moiety lies at the heart of these
mechanically interlocked architectures, because it enables both dynamic
covalent exchange and the binding of simple crown ethers. We demonstrated
that the rotaxane self-assembly follows a unique reaction pathway
and that the complex interplay between crown ether and thread can
be controlled in a transient fashion by addition of base and fuel
acid. Dynamic combinatorial libraries, when exposed to diverse nucleophiles,
revealed a profound stabilizing effect of the mechanical bond as well
as intriguing reactivity differences between seemingly similar [2]rotaxanes.
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Affiliation(s)
- Oleg Borodin
- Institute of Organic Chemistry, Ulm University, Albert-Einstein-Allee 11, 89081 Ulm, Germany
| | - Yevhenii Shchukin
- Institute of Organic Chemistry, Ulm University, Albert-Einstein-Allee 11, 89081 Ulm, Germany
| | - Craig C Robertson
- Department of Chemistry, University of Sheffield, Brook Hill, Sheffield S3 7HF, U.K
| | - Stefan Richter
- Institute of Organic Chemistry, Ulm University, Albert-Einstein-Allee 11, 89081 Ulm, Germany
| | - Max von Delius
- Institute of Organic Chemistry, Ulm University, Albert-Einstein-Allee 11, 89081 Ulm, Germany
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Sahoo D, Benny R, Ks NK, De S. Stimuli-Responsive Chiroptical Switching. Chempluschem 2021; 87:e202100322. [PMID: 34694736 DOI: 10.1002/cplu.202100322] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2021] [Revised: 09/23/2021] [Indexed: 12/16/2022]
Abstract
"Chirality" governs many fundamental properties in chemistry and biochemistry. While early investigations on stereochemistry are primarily dedicated to static chirality, there is an increasing interest in the field of dynamic chirality (chiral switches). These chiral switches are essential in controlling the directionality in molecular motors. Dynamic chiralities are equally crucial in switchable stereoselectivity, switchable asymmetric catalysis and enantioselective separation. Herein, we limit our discussion to recent advances on stimuli-induced chiroptical switching of axial, helical, and planar chirality in response to external stimuli. We also discuss a few examples of applications of the switchable chirality.
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Affiliation(s)
- Diptiprava Sahoo
- School of Chemistry, Indian Institute of Science Education and, Research Thiruvananthapuram (IISER-TVM), Thiruvananthapuram, 695551, India
| | - Renitta Benny
- School of Chemistry, Indian Institute of Science Education and, Research Thiruvananthapuram (IISER-TVM), Thiruvananthapuram, 695551, India
| | - Nithish Kumar Ks
- School of Chemistry, Indian Institute of Science Education and, Research Thiruvananthapuram (IISER-TVM), Thiruvananthapuram, 695551, India
| | - Soumen De
- School of Chemistry, Indian Institute of Science Education and, Research Thiruvananthapuram (IISER-TVM), Thiruvananthapuram, 695551, India
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Caprice K, Pál D, Besnard C, Galmés B, Frontera A, Cougnon FBL. Diastereoselective Amplification of a Mechanically Chiral [2]Catenane. J Am Chem Soc 2021; 143:11957-11962. [PMID: 34323081 PMCID: PMC8397304 DOI: 10.1021/jacs.1c06557] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Achiral [2]catenanes composed of rings with inequivalent sides may adopt chiral co-conformations. Their stereochemistry depends on the relative orientation of the interlocked rings and can be controlled by sterics or an external stimulus (e.g., a chemical stimulus). Herein, we have exploited this stereodynamic property to amplify a mechanically chiral (P)-catenane upon binding to (R)-1,1'-binaphthyl 2,2'-disulfonate, with a diastereomeric excess of 85%. The chirality of the [2]catenane was ascertained in the solid state by single crystal X-ray diffraction and in solution by NMR and CD spectroscopies. This study establishes a robust basis for the development of a new synthetic approach to access enantioenriched mechanically chiral [2]catenanes.
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Affiliation(s)
- Kenji Caprice
- Department of Organic Chemistry, University of Geneva, 30 Quai Ernest-Ansermet, 1211 Geneva, Switzerland
| | - Dávid Pál
- Department of Organic Chemistry, University of Geneva, 30 Quai Ernest-Ansermet, 1211 Geneva, Switzerland
| | - Céline Besnard
- Laboratory of Crystallography, University of Geneva, 24 Quai Ernest-Ansermet, 1211 Geneva, Switzerland
| | - Bartomeu Galmés
- Department de Química, Universitat de les Illes Balears, Carretera de Valldemossa km 7.5, 07122 Palma de Mallorca, Baleares, Spain
| | - Antonio Frontera
- Department de Química, Universitat de les Illes Balears, Carretera de Valldemossa km 7.5, 07122 Palma de Mallorca, Baleares, Spain
| | - Fabien B L Cougnon
- Department of Organic Chemistry, University of Geneva, 30 Quai Ernest-Ansermet, 1211 Geneva, Switzerland
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Olivo G, Capocasa G, Del Giudice D, Lanzalunga O, Di Stefano S. New horizons for catalysis disclosed by supramolecular chemistry. Chem Soc Rev 2021; 50:7681-7724. [PMID: 34008654 DOI: 10.1039/d1cs00175b] [Citation(s) in RCA: 74] [Impact Index Per Article: 24.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
The adoption of a supramolecular approach in catalysis promises to address a number of unmet challenges, ranging from activity (unlocking of novel reaction pathways) to selectivity (alteration of the innate selectivity of a reaction, e.g. selective functionalization of C-H bonds) and regulation (switch ON/OFF, sequential catalysis, etc.). Supramolecular tools such as reversible association and recognition, pre-organization of reactants and stabilization of transition states upon binding offer a unique chance to achieve the above goals disclosing new horizons whose potential is being increasingly recognized and used, sometimes reaching the degree of ripeness for practical use. This review summarizes the main developments that have opened such new frontiers, with the aim of providing a guide to researchers approaching the field. We focus on artificial supramolecular catalysts of defined stoichiometry which, under homogeneous conditions, unlock outcomes that are highly difficult if not impossible to attain otherwise, namely unnatural reactivity or selectivity and catalysis regulation. The different strategies recently explored in supramolecular catalysis are concisely presented, and, for each one, a single or very few examples is/are described (mainly last 10 years, with only milestone older works discussed). The subject is divided into four sections in light of the key design principle: (i) nanoconfinement of reactants, (ii) recognition-driven catalysis, (iii) catalysis regulation by molecular machines and (iv) processive catalysis.
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Affiliation(s)
- Giorgio Olivo
- Dipartimento di Chimica, Università degli Studi di Roma "La Sapienza", Dipartimento di Chimica and ISB-CNR Sede Secondaria di Roma - Meccanismi di Reazione, P.le A. Moro 5, I-00185 Rome, Italy.
| | - Giorgio Capocasa
- Dipartimento di Chimica, Università degli Studi di Roma "La Sapienza", Dipartimento di Chimica and ISB-CNR Sede Secondaria di Roma - Meccanismi di Reazione, P.le A. Moro 5, I-00185 Rome, Italy.
| | - Daniele Del Giudice
- Dipartimento di Chimica, Università degli Studi di Roma "La Sapienza", Dipartimento di Chimica and ISB-CNR Sede Secondaria di Roma - Meccanismi di Reazione, P.le A. Moro 5, I-00185 Rome, Italy.
| | - Osvaldo Lanzalunga
- Dipartimento di Chimica, Università degli Studi di Roma "La Sapienza", Dipartimento di Chimica and ISB-CNR Sede Secondaria di Roma - Meccanismi di Reazione, P.le A. Moro 5, I-00185 Rome, Italy.
| | - Stefano Di Stefano
- Dipartimento di Chimica, Università degli Studi di Roma "La Sapienza", Dipartimento di Chimica and ISB-CNR Sede Secondaria di Roma - Meccanismi di Reazione, P.le A. Moro 5, I-00185 Rome, Italy.
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Kench T, Summers PA, Kuimova MK, Lewis JEM, Vilar R. Rotaxanes as Cages to Control DNA Binding, Cytotoxicity, and Cellular Uptake of a Small Molecule*. Angew Chem Int Ed Engl 2021; 60:10928-10934. [PMID: 33577711 DOI: 10.1002/anie.202100151] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2021] [Revised: 02/08/2021] [Indexed: 11/08/2022]
Abstract
The efficacy of many drugs can be limited by undesirable properties, such as poor aqueous solubility, low bioavailability, and "off-target" interactions. To combat this, various drug carriers have been investigated to enhance the pharmacological profile of therapeutic agents. In this work, we demonstrate the use of mechanical protection to "cage" a DNA-targeting metallodrug within a photodegradable rotaxane. More specifically, we report the synthesis of rotaxanes incorporating as a stoppering unit a known G-quadruplex DNA binder, namely a PtII -salphen complex. This compound cannot interact with DNA when it is part of the mechanically interlocked assembly. The second rotaxane stopper can be cleaved by either light or an esterase, releasing the PtII -salphen complex. This system shows enhanced cell permeability and limited cytotoxicity within osteosarcoma cells compared to the free drug. Light activation leads to a dramatic increase in cytotoxicity, arising from the translocation of PtII -salphen to the nucleus and its binding to DNA.
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Affiliation(s)
- Timothy Kench
- Department of Chemistry, Imperial College London, White City Campus, London, W12 0BZ, UK
| | - Peter A Summers
- Department of Chemistry, Imperial College London, White City Campus, London, W12 0BZ, UK
| | - Marina K Kuimova
- Department of Chemistry, Imperial College London, White City Campus, London, W12 0BZ, UK
| | - James E M Lewis
- Department of Chemistry, Imperial College London, White City Campus, London, W12 0BZ, UK
| | - Ramon Vilar
- Department of Chemistry, Imperial College London, White City Campus, London, W12 0BZ, UK
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41
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Kench T, Summers PA, Kuimova MK, Lewis JEM, Vilar R. Rotaxanes as Cages to Control DNA Binding, Cytotoxicity, and Cellular Uptake of a Small Molecule**. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202100151] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Timothy Kench
- Department of Chemistry Imperial College London White City Campus London W12 0BZ UK
| | - Peter A. Summers
- Department of Chemistry Imperial College London White City Campus London W12 0BZ UK
| | - Marina K. Kuimova
- Department of Chemistry Imperial College London White City Campus London W12 0BZ UK
| | - James E. M. Lewis
- Department of Chemistry Imperial College London White City Campus London W12 0BZ UK
| | - Ramon Vilar
- Department of Chemistry Imperial College London White City Campus London W12 0BZ UK
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Li K, Wang Y, Guo F, He L, Zhang L. Sliding dynamics of multi-rings on a semiflexible polymer in poly[ n]catenanes. SOFT MATTER 2021; 17:2557-2567. [PMID: 33514985 DOI: 10.1039/d0sm02084b] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
The sliding dynamics of one- or multi-ring structures along a semiflexible cyclic polymer in radial poly[n]catenanes is investigated using molecular dynamics simulations. The fixed and fluctuating (non-fixed) semiflexible central cyclic polymers are considered, respectively. With increasing bending energy of the central cyclic polymer, for the fixed case, the diffusion coefficient increases monotonically due to the reduction of the tortuous sliding path, while for the fluctuating case, the diffusion coefficient decreases. This indicates that the contribution of the polymer fluctuation is suppressed by a further increase in the stiffness of the central cyclic chain. Compared with the one ring case, the mean-square displacement of the multiple rings exhibits a unique sub-diffusive behavior at intermediate time scales due to the repulsion between two neighboring rings. In addition, for the multi-ring system, the whole set of rings exhibit relatively slower diffusion, but faster local dynamics of threading rings and rotational diffusion of the central cyclic polymer arise. These results may help us to understand the diffusion motion of rings in radial poly[n]catenanes from a fundamental point of view and control the sliding dynamics in molecular designs.
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Affiliation(s)
- Ke Li
- Department of Physics, Zhejiang University, Zhejiang, 310027, China.
| | - Yaxin Wang
- Department of Physics, Zhejiang University, Zhejiang, 310027, China.
| | - Fuchen Guo
- Department of Physics, Zhejiang University, Zhejiang, 310027, China.
| | - Linli He
- Department of Physics, Wenzhou University, Wenzhou, 325035, China.
| | - Linxi Zhang
- Department of Physics, Zhejiang University, Zhejiang, 310027, China.
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Goswami A, Gaikwad S, Schmittel M. A Switchable Catalyst Duo for Acyl Transfer Proximity Catalysis and Regulation of Substrate Selectivity. Chemistry 2021; 27:2997-3001. [PMID: 33022776 PMCID: PMC7898682 DOI: 10.1002/chem.202004416] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2020] [Indexed: 12/15/2022]
Abstract
Enzymes are encoded with a gamut of information to catalyze a highly selective transformation by selecting the proper reactants from an intricate mixture of constituents. Mimicking biological machinery, two switchable catalysts with differently sized cavities and allosteric control are conceived that allow complementary size-selective acyl transfer in an on/off manner by modulating the effective local concentration of the substrates. Selective activation of one of two catalysts in a mixture of reactants of similar reactivity enabled upregulation of the desired product.
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Affiliation(s)
- Abir Goswami
- Center of Micro and Nanochemistry and Engineering, Organische Chemie IUniversity of SiegenAdolf-Reichwein Str. 257068SiegenGermany
| | - Sudhakar Gaikwad
- Center of Micro and Nanochemistry and Engineering, Organische Chemie IUniversity of SiegenAdolf-Reichwein Str. 257068SiegenGermany
| | - Michael Schmittel
- Center of Micro and Nanochemistry and Engineering, Organische Chemie IUniversity of SiegenAdolf-Reichwein Str. 257068SiegenGermany
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44
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Enantioselective preparation of mechanically planar chiral rotaxanes by kinetic resolution strategy. Nat Commun 2021; 12:404. [PMID: 33452235 PMCID: PMC7811017 DOI: 10.1038/s41467-020-20372-0] [Citation(s) in RCA: 29] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2020] [Accepted: 11/24/2020] [Indexed: 12/20/2022] Open
Abstract
Asymmetric synthesis of mechanically planar chiral rotaxanes and topologically chiral catenanes has been a long-standing challenge in organic synthesis. Recently, an excellent strategy was developed based on diastereomeric synthesis of rotaxanes and catenanes with mechanical chirality followed by removal of the chiral auxiliary. On the other hand, its enantioselective approach has been quite limited. Here, we report enantioselective preparation of mechanically planar chiral rotaxanes by kinetic resolution of the racemates via remote asymmetric acylation of a hydroxy group in the axis component, which provides an unreacted enantiomer in up to >99.9% ee in 29% yield (the theoretical maximum yield of kinetic resolution of racemate is 50%). While the rotaxane molecules are expected to have conformational complexity, our original catalysts enabled to discriminate the mechanical chirality of the rotaxanes efficiently with the selectivity factors in up to 16. Since the discovery of mechanically planar chiral rotaxanes and topologically chiral catenanes, their asymmetric synthesis has been a long-standing challenge. Here, the authors report enantioselective preparation of mechanically planar chiral rotaxanes with up to 99.9% ee in 29% yield.
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Abstract
Mechanically interlocked molecules (MIMs) have gained attention in the field of catalysis due to their unique molecular properties. Central to MIMs, rotaxanes are highly promising and attractive supramolecular catalysts due to their unique three-dimensional structures and the flexibility of their subcomponents. This Minireview discusses the use of rotaxanes in organocatalysis and transition-metal catalysis.
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Affiliation(s)
- Carel Kwamen
- Faculty of ChemistryOrganic Chemistry and Center for NanointegrationDuisburg- Essen (CENIDE)University of Duisburg-EssenUniversitätsstrasse 745141EssenGermany
| | - Jochen Niemeyer
- Faculty of ChemistryOrganic Chemistry and Center for NanointegrationDuisburg- Essen (CENIDE)University of Duisburg-EssenUniversitätsstrasse 745141EssenGermany
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46
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Perez JDM, Puigcerver J, Orlando T, Pastor A, Martins MAP, Alajarin M, Martinez-Cuezva A, Berna J. Mechanical bonding activation in rotaxane-based organocatalysts. Org Chem Front 2021. [DOI: 10.1039/d1qo00789k] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Interlocked organocatalysts show enhanced catalytic performance when compared with their non-interlocked threads.The ring cooperatively activates the substrates, facilitating the formation and stabilization of catalytically active intermediates.
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Affiliation(s)
- Jesus de Maria Perez
- Departamento de Química Orgánica
- Facultad de Química
- Regional Campus of International Excellence “Campus Mare Nostrum”
- Universidad de Murcia
- Murcia
| | - Julio Puigcerver
- Departamento de Química Orgánica
- Facultad de Química
- Regional Campus of International Excellence “Campus Mare Nostrum”
- Universidad de Murcia
- Murcia
| | - Tainara Orlando
- Núcleo de Química de Heterociclos (NUQUIMHE)
- Departamento de Química
- Universidade Federal de Santa Maria
- 97105-900 Santa Maria-RS
- Brazil
| | - Aurelia Pastor
- Departamento de Química Orgánica
- Facultad de Química
- Regional Campus of International Excellence “Campus Mare Nostrum”
- Universidad de Murcia
- Murcia
| | - Marcos A. P. Martins
- Núcleo de Química de Heterociclos (NUQUIMHE)
- Departamento de Química
- Universidade Federal de Santa Maria
- 97105-900 Santa Maria-RS
- Brazil
| | - Mateo Alajarin
- Departamento de Química Orgánica
- Facultad de Química
- Regional Campus of International Excellence “Campus Mare Nostrum”
- Universidad de Murcia
- Murcia
| | - Alberto Martinez-Cuezva
- Departamento de Química Orgánica
- Facultad de Química
- Regional Campus of International Excellence “Campus Mare Nostrum”
- Universidad de Murcia
- Murcia
| | - Jose Berna
- Departamento de Química Orgánica
- Facultad de Química
- Regional Campus of International Excellence “Campus Mare Nostrum”
- Universidad de Murcia
- Murcia
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Da Silva Rodrigues R, Luis ET, Marshall DL, McMurtrie JC, Mullen KM. Hydrazone exchange: a viable route for the solid-tethered synthesis of [2]rotaxanes. NEW J CHEM 2021. [DOI: 10.1039/d1nj00388g] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Abstract
Using a hydrazone exchange methodology, resin beads were functionalised with [2]rotaxanes at up to 80% efficiency—higher than using other dynamic or irreversible synthetic approaches to form self-assembled structures on solid supports.
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Affiliation(s)
| | - Ena T. Luis
- School of Chemistry and Physics
- Queensland University of Technology
- Brisbane
- Australia
- Centre for Materials Science
| | - David L. Marshall
- Centre for Materials Science
- Queensland University of Technology
- Brisbane
- Australia
- Central Analytical Research Facility
| | - John C. McMurtrie
- School of Chemistry and Physics
- Queensland University of Technology
- Brisbane
- Australia
- Centre for Materials Science
| | - Kathleen M. Mullen
- School of Chemistry and Physics
- Queensland University of Technology
- Brisbane
- Australia
- Centre for Materials Science
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Schmittel M, Howlader P. Toward Molecular Cybernetics - the Art of Communicating Chemical Systems. CHEM REC 2020; 21:523-543. [PMID: 33350570 DOI: 10.1002/tcr.202000126] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2020] [Revised: 11/27/2020] [Accepted: 11/30/2020] [Indexed: 11/10/2022]
Abstract
The emerging field of molecular cybernetics has the potential to widely broaden our perception of chemistry. Chemistry will develop beyond its current focus that is mainly concerned with single transformations, pure compounds, and/or defined mixtures. On this way, chemistry will become autonomous, networked and smart through communicating molecules each of which serves a control engineering purpose, like the set of wheels in the machinery of life. The present personal account describes our latest developments in this field.
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Affiliation(s)
- Michael Schmittel
- Center of Micro and Nanochemistry and Engineering, Organische Chemie I, University of Siegen, Adolf-Reichwein Str. 2, 57068, Siegen, Germany
| | - Prodip Howlader
- Center of Micro and Nanochemistry and Engineering, Organische Chemie I, University of Siegen, Adolf-Reichwein Str. 2, 57068, Siegen, Germany
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Cyclodextrin Rotaxanes of Pt Complexes and Their Conversion to Pt Nanoparticles. Molecules 2020; 25:molecules25235617. [PMID: 33260384 PMCID: PMC7729445 DOI: 10.3390/molecules25235617] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2020] [Revised: 11/21/2020] [Accepted: 11/23/2020] [Indexed: 11/16/2022] Open
Abstract
The cationic Pt complex (Pt(NC6H4-C6H4N-(CH2)10-O(C6H3-3,5-(OMe)2)(MeN-(CH2CH2NMe2)2))+ was prepared by the reaction of alkylbipyridinium ligand with a nitrateplatinum(II) complex. Mixing the complex and α- and β-cyclodextrins in aqueous media produced the corresponding [2]rotaxanes with 1:1 stoichiometry. γ-Cyclodextrin and the Pt complex formed a rotaxane having components in a 1:1 or 2:1 molar ratio. The results of mass and nuclear magnetic resonance (NMR) measurements confirmed the rotaxane structures of the Pt complexes. Transmission electron microscopy (TEM) and atomic force microscope (AFM) analyses revealed the formation of micelles or vesicles. The addition of NaBH4 to the rotaxanes in aqueous media formed Pt nanoparticles with diameters of 1.3-2.8 nm, as characterized by TEM. The aggregated size of the nanoparticles formed from the rotaxane did not change even at 70 °C, and they showed higher thermal stability than those obtained from the reduction of the cyclodextrin-free Pt complex.
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Martinez-Cuezva A, Pastor A, Marin-Luna M, Diaz-Marin C, Bautista D, Alajarin M, Berna J. Cyclization of interlocked fumaramides into β-lactams: experimental and computational mechanistic assessment of the key intercomponent proton transfer and the stereocontrolling active pocket. Chem Sci 2020; 12:747-756. [PMID: 34163808 PMCID: PMC8178992 DOI: 10.1039/d0sc05757f] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023] Open
Abstract
A detailed mechanistic study of the diastereoselective CsOH-promoted cyclization of interlocked fumaramides to give β-lactams is described. The mechanistic analysis comprises the experimental evaluation of the structure-reactivity relationship for a wide range of fumaramides [2]rotaxanes (Hammet-plots), KIE studies with deuterium-labelled interlocked fumaramides and computational analysis of two alternative mechanistic pathways for the cyclization process. The obtained results confirm that: (a) the rate-determining step is the deprotonation of the N-benzyl group of the thread by the amidate group of the macrocycle generated by the external base, (b) the polyamide macrocycle plays an important role not only as activating element but also as the stereodifferenciating factor responsible for the observed diastereoselection and (c) the higher flexibility of the adamantyl core speeds up the cyclization process in diadamantyl-derived rotaxanes. A mechanistic study of the diastereoselective cyclization of interlocked fumaramides to give β-lactams unveils the key factors for successfully taming the process.![]()
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Affiliation(s)
- Alberto Martinez-Cuezva
- Department of Organic Chemistry, Faculty of Chemistry, University of Murcia, Regional Campus of International Excellence "Campus Mare Nostrum" 30100 Murcia Spain
| | - Aurelia Pastor
- Department of Organic Chemistry, Faculty of Chemistry, University of Murcia, Regional Campus of International Excellence "Campus Mare Nostrum" 30100 Murcia Spain
| | - Marta Marin-Luna
- Department of Organic Chemistry, Faculty of Chemistry, University of Murcia, Regional Campus of International Excellence "Campus Mare Nostrum" 30100 Murcia Spain
| | - Carmen Diaz-Marin
- Department of Organic Chemistry, Faculty of Chemistry, University of Murcia, Regional Campus of International Excellence "Campus Mare Nostrum" 30100 Murcia Spain
| | | | - Mateo Alajarin
- Department of Organic Chemistry, Faculty of Chemistry, University of Murcia, Regional Campus of International Excellence "Campus Mare Nostrum" 30100 Murcia Spain
| | - Jose Berna
- Department of Organic Chemistry, Faculty of Chemistry, University of Murcia, Regional Campus of International Excellence "Campus Mare Nostrum" 30100 Murcia Spain
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