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Kokuszi LTF, Paes YM, Faria ALS, Alvarado-Huayhuaz J, Balboni MDC, Dos Santos MC, Dos Santos SC, de Menezes Vicenti JR, Parize AL, Werhli AV, Dos Santos Machado K, de Lima VR. Benzohydroxamate and nitrobenzohydroxamate affect membrane order: Correlations between spectroscopic and molecular dynamics to approach tuberculosis. BIOCHIMICA ET BIOPHYSICA ACTA. BIOMEMBRANES 2024; 1866:184378. [PMID: 39163923 DOI: 10.1016/j.bbamem.2024.184378] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/09/2024] [Revised: 07/17/2024] [Accepted: 08/14/2024] [Indexed: 08/22/2024]
Abstract
This work correlates the effects of benzohydroxamate (BH) and nitrobenzohydroxamate (NBH) anions in two membrane models which may be used for anti-tuberculosis (anti-TB) spectroscopic studies and/or computational studies. Firstly, the BH and NBH influence in the physico-chemical properties of soy asolectin (ASO)-based large multilamellar vesicles (MLVs) were evaluated by spectroscopic and calorimetric studies. In parallel, the BH and NBH interaction with a Mycobacterium tuberculosis (Mtb) inner membrane model, composed of phosphatidyl-myo-inositol-dimannoside (PIM2), was investigated by molecular dynamics (MD) simulations. Spectroscopic data showed a localization of BH close to the lipid phosphate group, while NBH was found close to the choline region. The BH ordered the ASO choline, phosphate and carbonyl regions and disrupted the acyl methylenes, reducing the membrane packing of the lipid hydrophobic region. On the other hand, NBH showed an ordering effect in all the lipid groups (polar, interface and hydrophobic ones). By MD studies, it was found that NBH enhanced the stability of the PIM2 membrane more than BH, while also being positioned closer to its mannosyl oxygens. As in ASO MLVs, BH was localized close to the PIM2 phosphate group and disrupted its acyl chains. However, higher values of lateral diffusion were observed for NBH than BH. Despite this, BH and NBH increased the membrane thickness by 35 %, which suggests a global ordering effect of both drugs. Findings of this work reinforce the accordance and complementarity between MLVs based on ASO and the PIM2 MD model results to study the drug effects in Mtb membrane properties.
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Affiliation(s)
- Lucas Thadeu Felipe Kokuszi
- Grupo de Investigação em Interações Moleculares em Membranas, Programa de Pós-Graduação em Química Tecnológica e Ambiental (PPGQTA), Escola de Química e Alimentos (EQA), 96203-900 Rio Grande, RS, Brazil
| | - Yago Mendes Paes
- COMBI-Lab, Grupo de Biologia Computacional, Centro de Ciências Computacionais, Universidade Federal do Rio Grande, Av. Itália, km 8, Campus Carreiros, 96203-900 Rio Grande, RS, Brazil
| | - Aline Loise Santana Faria
- Grupo de Investigação em Interações Moleculares em Membranas, Programa de Pós-Graduação em Química Tecnológica e Ambiental (PPGQTA), Escola de Química e Alimentos (EQA), 96203-900 Rio Grande, RS, Brazil
| | - Jesus Alvarado-Huayhuaz
- COMBI-Lab, Grupo de Biologia Computacional, Centro de Ciências Computacionais, Universidade Federal do Rio Grande, Av. Itália, km 8, Campus Carreiros, 96203-900 Rio Grande, RS, Brazil
| | - Maurício Dornelles Caldeira Balboni
- COMBI-Lab, Grupo de Biologia Computacional, Centro de Ciências Computacionais, Universidade Federal do Rio Grande, Av. Itália, km 8, Campus Carreiros, 96203-900 Rio Grande, RS, Brazil
| | - Marinalva Cardoso Dos Santos
- Grupo de Investigação em Interações Moleculares em Membranas, Programa de Pós-Graduação em Química Tecnológica e Ambiental (PPGQTA), Escola de Química e Alimentos (EQA), 96203-900 Rio Grande, RS, Brazil
| | - Sandra Cruz Dos Santos
- Grupo de Investigação em Interações Moleculares em Membranas, Programa de Pós-Graduação em Química Tecnológica e Ambiental (PPGQTA), Escola de Química e Alimentos (EQA), 96203-900 Rio Grande, RS, Brazil
| | - Juliano Rosa de Menezes Vicenti
- Grupo de Investigação em Interações Moleculares em Membranas, Programa de Pós-Graduação em Química Tecnológica e Ambiental (PPGQTA), Escola de Química e Alimentos (EQA), 96203-900 Rio Grande, RS, Brazil
| | - Alexandre Luis Parize
- Programa de Pós-Graduação em Química-PPGQ, Departamento de Química, Centro de Ciências Físicas e Matemáticas-CFM, Universidade Federal de Santa Catarina-UFSC, Campus Universitário Trindade, Caixa Postal 476, Florianópolis, SC 88040-900, Brazil
| | - Adriano Velasque Werhli
- COMBI-Lab, Grupo de Biologia Computacional, Centro de Ciências Computacionais, Universidade Federal do Rio Grande, Av. Itália, km 8, Campus Carreiros, 96203-900 Rio Grande, RS, Brazil
| | - Karina Dos Santos Machado
- COMBI-Lab, Grupo de Biologia Computacional, Centro de Ciências Computacionais, Universidade Federal do Rio Grande, Av. Itália, km 8, Campus Carreiros, 96203-900 Rio Grande, RS, Brazil.
| | - Vânia Rodrigues de Lima
- Grupo de Investigação em Interações Moleculares em Membranas, Programa de Pós-Graduação em Química Tecnológica e Ambiental (PPGQTA), Escola de Química e Alimentos (EQA), 96203-900 Rio Grande, RS, Brazil.
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Rezazade M, Ketabi S, Qomi M. Effect of functionalization on the adsorption performance of carbon nanotube as a drug delivery system for imatinib: molecular simulation study. BMC Chem 2024; 18:85. [PMID: 38678270 DOI: 10.1186/s13065-024-01197-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2024] [Accepted: 04/19/2024] [Indexed: 04/29/2024] Open
Abstract
In this study, efficiency of functionalized carbon nanotube as a potential delivery system for imatinib anti-cancer drug was investigated. Accordingly, carboxyl and hydroxyl functionalized carbon nanotube were inspected as a notable candidate for the carriage of this drug in aqueous media. For this purpose, possible interactions of imatinib with pure and functionalized carbon nanotube were considered in aqueous media. The compounds were optimized in gas phase using density functional calculations. Solvation free energies and association free energies of the optimized structures were then studied by Monte Carlo simulation and perturbation method in water environment. Outcomes of quantum mechanical calculations presented that pure and functionalized carbon nanotubes can act as imatinib drug adsorbents in gas phase. However, results of association free energy calculations in aqueous solution indicated that only carboxyl and hydroxyl functionalized carbon nanotubes could interact with imatinib. Monte Carlo simulation results revealed that electrostatic interactions play a vital role in the intermolecular interaction energies after binding of drug and nanotube in aqueous solution. Computed solvation free energies in water showed that the interactions with functionalized carbon nanotubes significantly enhance the solubility of imatinib, which could improve its in vivo bioavailability.
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Affiliation(s)
- Masume Rezazade
- Department of Medicinal Chemistry, Faculty of Pharmacy, Tehran Medical Sciences, Islamic Azad University, Tehran, Iran
| | - Sepideh Ketabi
- Department of Chemistry, Faculty of Pharmaceutical Chemistry, Tehran Medical Sciences, Islamic Azad University, Tehran, Iran.
| | - Mahnaz Qomi
- Department of Medicinal Chemistry, Faculty of Pharmacy, Tehran Medical Sciences, Islamic Azad University, Tehran, Iran
- Active Pharmaceutical Ingredients Research (APIRC), Tehran Medical Sciences, Islamic Azad University, Tehran, Iran
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3
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Ghosh B, Roy N, Mandal S, Ali S, Bomzan P, Roy D, Salman Haydar M, Dakua VK, Upadhyay A, Biswas D, Paul KK, Roy MN. Host-Guest Encapsulation of RIBO with TSC4X: Synthesis, Characterization, and Its Application by Physicochemical and Computational Investigations. ACS OMEGA 2023; 8:6778-6790. [PMID: 36844564 PMCID: PMC9948204 DOI: 10.1021/acsomega.2c07396] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/18/2022] [Accepted: 01/25/2023] [Indexed: 06/18/2023]
Abstract
In our present work, we synthesized a new encapsulated complex denoted as RIBO-TSC4X, which was derived from an important vitamin riboflavin (RIBO) and p-sulfonatothiacalix[4]arene(TSC4X). The synthesized complex RIBO-TSC4X was then characterized by utilizing several spectroscopic techniques such as 1H-NMR, FT-IR, PXRD, SEM, and TGA. Job's plot has been employed to show the encapsulation of RIBO (guest) with TSC4X (host) having a 1:1 molar ratio. The molecular association constant of the complex entity (RIBO-TSC4X) was found to be 3116.29 ± 0.17 M-1, suggesting the formation of a stable complex. The augment in aqueous solubility of the RIBO-TSC4X complex compared to pure RIBO was investigated by UV-vis spectroscopy, and it was viewed that the newly synthesized complex has almost 30 times enhanced solubility over pure RIBO. The enhancement of thermal stability upto 440 °C for the RIBO-TSC4X complex was examined by TG analysis. This research also forecasts RIBO's release behavior in the presence of CT-DNA, and at the same time, BSA binding study was also carried out. The synthesized RIBO-TSC4X complex exhibited comparatively better free radical scavenging activity, thereby minimizing oxidative injury of the cell as evident from a series of antioxidant and anti-lipid peroxidation assay. Furthermore, the RIBO-TSC4X complex showed peroxidase-like biomimetic activity, which is very useful for several enzyme catalyst reactions.
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Affiliation(s)
- Biswajit Ghosh
- Department
of Chemistry, University of North Bengal, Darjeeling 734013, West Bengal, India
| | - Niloy Roy
- Department
of Chemistry, University of North Bengal, Darjeeling 734013, West Bengal, India
| | - Saikat Mandal
- Department
of Chemistry, National Institute of Technology, Durgapur 713209, India
| | - Salim Ali
- Department
of Chemistry, University of North Bengal, Darjeeling 734013, West Bengal, India
| | - Pranish Bomzan
- Department
of Chemistry, Gorubathan Government College, Kalimpong 735231, India
| | - Debadrita Roy
- Department
of Chemistry, University of North Bengal, Darjeeling 734013, West Bengal, India
| | - Md Salman Haydar
- Department
of Botany, University of North Bengal, Darjeeling 734013, India
| | - Vikas Kumar Dakua
- Department
of Chemistry, Alipurduar University, Alipurduar 736122, West Bengal, India
| | - Anupam Upadhyay
- Department
of Chemistry, Alipurduar University, Alipurduar 736122, West Bengal, India
| | - Debabrata Biswas
- Department
of Chemistry, Alipurduar University, Alipurduar 736122, West Bengal, India
| | - Kausik Kumar Paul
- Department
of Chemistry, Alipurduar University, Alipurduar 736122, West Bengal, India
| | - Mahendra Nath Roy
- Department
of Chemistry, University of North Bengal, Darjeeling 734013, West Bengal, India
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Potential of C-Phenylcalix[4]Resorcinarene Epoxide Compound as Drug Delivery Agent in Breast Cancer Cells MCF-7. JURNAL KIMIA SAINS DAN APLIKASI 2022. [DOI: 10.14710/jksa.25.3.123-129] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Cancer therapy through conventional chemotherapy has been widely applied; however, one of the main disadvantages of chemotherapy is the non-selective targeting of cancer cells which causes various adverse side effects. The development of drug delivery agents that are more selective and effective in cancer therapy needs to be performed so that the drugs have a therapeutic effect and minimize side effects. In this study, the compound C-phenylcalyx[4]resorcinarene epoxide (CFKRE) has acted as a drug delivery agent because it can form host complex interactions with ligands. The CFKRE compound was synthesized through two reaction steps: the condensation and alkylation reactions of the epoxide. The structure was analyzed using FTIR, 1H-, and 13C-NMR spectrophotometers and then tested for in vitro cytotoxicity using the MTT assay. The results showed that 70% yield of CFKRE was obtained. Molecular docking analysis of CFKRE compounds against PDGFR and EGFR proteins showed high binding energy compared to conventional chemotherapeutic agents. Molecular dynamic studies showed that CFKRE compounds could form a host-ligand complex with a −350.4 kcal/mol binding energy. Cytotoxic assay of CFKRE compound against MCF-7 breast cancer cells and Vero cells gave IC50 values of 4.04 and 29.59 μg/mL, respectively. These results indicated that CFKRE compounds are not toxic and have the potential to be utilized as new candidates for drug delivery agents.
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Jadhav AS, Chaudhari AU, Kodam KM, Malkhede DD. Photophysical and NMR studies of encapsulation of 2-cyano-6-hydroxy benzothiazole in p-sulfonatocalix[6]arene and its biological applications. Analyst 2021; 146:5294-5306. [PMID: 34328154 DOI: 10.1039/d1an00770j] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
This work deals with the study of the interaction between 2-cyano-6-hydroxy benzothiazole (CHBT) and p-sulfonatocalix[6]arene (SCX6) at different pH values in aqueous medium by UV-visible absorption spectroscopy and steady-state fluorescence spectroscopy. The results demonstrate the strong influence of SCX6 on the fluorescence properties of CHBT. The steady-state emission of CHBT shows strong sensitivity to its environment. The mode of inclusion complexation of CHBT and SCX6 has also been investigated using HR-MS, FT-IR, NMR, 2D NMR, and FESEM analysis. With the increase in SCX6 concentration, absorbance decreased with an isosbestic point at 305 nm. The binding constant is calculated by a spectrofluorimetric method and stoichiometry by Job's method. The formation of an inclusion complex has been confirmed by 2D NMR NOESY, COSY, ROESY, HMBC, and HSQC spectroscopic methods. The complex is seen to be stabilized by electrostatic interactions between CHBT and the nanocavity of SCX6. Studies with cellular systems support that the CHBT-SCX6 complex is more effective in killing cancerous cells and hence, SCX6 may prove to be an effective carrier for drug molecules like CHBT.
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Affiliation(s)
- Ankita S Jadhav
- Department of Chemistry, Savitribai Phule Pune University, Pune-411007, India.
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p-Sulfonatocalixarene versus p-thiasulfonatocalixarene: encapsulation of tenofovir disoproxil fumarate and implications to ESI-MS, HPLC, NMR, DFT and anti-MRSA activities. J INCL PHENOM MACRO 2021. [DOI: 10.1007/s10847-020-01022-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
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7
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Oguz M, Dogan B, Durdagi S, Bhatti AA, Karakurt S, Yilmaz M. Investigation of supramolecular interaction of quercetin with N, N-dimethylamine-functionalized p-sulfonated calix[4,8]arenes using molecular modeling and their in vitro cytotoxic response towards selected cancer cells. NEW J CHEM 2021. [DOI: 10.1039/d1nj03038h] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Although quercetin is an effective bioactive compound preventing the progress of several human cancers, its impact is reduced due to low bioavailability.
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Affiliation(s)
- Mehmet Oguz
- Selcuk University, Department of Chemistry, 42075 Konya, Turkey
- Department of Advanced Material and Nanotechnology, Selcuk University, 42031 Konya, Turkey
| | - Berna Dogan
- Department of Biochemistry, School of Medicine, Bahcesehir University, Istanbul, Turkey
- Computational Biology and Molecular Simulations Laboratory, Department of Biophysics, School of Medicine, Bahcesehir University, Istanbul, Turkey
| | - Serdar Durdagi
- Computational Biology and Molecular Simulations Laboratory, Department of Biophysics, School of Medicine, Bahcesehir University, Istanbul, Turkey
| | - Asif Ali Bhatti
- Department of Chemistry, Government College University Hyderabad, Hyderabad, 71000, Pakistan
| | - Serdar Karakurt
- Selcuk University, Department of Biochemistry, Konya 42075, Turkey
| | - Mustafa Yilmaz
- Selcuk University, Department of Chemistry, 42075 Konya, Turkey
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8
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Hassanzadeh P. Towards the quantum-enabled technologies for development of drugs or delivery systems. J Control Release 2020; 324:260-279. [DOI: 10.1016/j.jconrel.2020.04.050] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2019] [Revised: 04/28/2020] [Accepted: 04/29/2020] [Indexed: 12/20/2022]
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Gassoumi B, Ghalla H, Chaabane RB. A theoretical study of the global and local electrophilicity, nucleophilicity, polarizability and QTAIM theory for calix[4]arene-gas interaction. Heliyon 2020; 6:e04554. [PMID: 32775724 PMCID: PMC7399128 DOI: 10.1016/j.heliyon.2020.e04554] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2020] [Revised: 06/02/2020] [Accepted: 07/22/2020] [Indexed: 11/25/2022] Open
Abstract
The calix[4]arene molecule, abbreviated as CX[4], is known by the four phenolic groups and a hydrophobic cavity able to enclose small molecules. The interactions between CX[4] and NO3, NO2, CO2, and N2 gas molecules have been studied. These guest species are placed inside and outside the cavity of the host molecule CX[4]. The formation of H-bonding has been deeply discussed based on the infrared spectrum and the polarizability analysis. Global and local indices have been calculated for a series of gas (NO3, NO2, CO2 and N2) in interaction with the CX[4] molecule to explain the electrophilic or nucleophilic activations in endo-vs. exo-cavity interaction zone. As expected, there is a correlation between the proposed global electrophilicity and global nucleophilicity together for an explanation of the chemo-selectivity region. Finally, the topological parameter analyses of the host-guests interactions have been estimated by using DFT calculations.
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Affiliation(s)
- B. Gassoumi
- Laboratory of Advanced Materials and Interfaces (LIMA), University of Monastir, Faculty of Science of Monastir, Avenue of Environnment, 5000, Monastir, Tunisia
- Institute of Light and Matter, UMR5306 University of Lyon 1-CNRS, University of Lyon, 69622, Villeurbanne Cedex, France
| | - H. Ghalla
- University of Monastir, Quantum and Statistical Physics Laboratory, Faculty of Science, Monastir, 5079, Tunisia
| | - R. Ben. Chaabane
- Laboratory of Advanced Materials and Interfaces (LIMA), University of Monastir, Faculty of Science of Monastir, Avenue of Environnment, 5000, Monastir, Tunisia
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Kumar R, Sharma A, Singh H, Suating P, Kim HS, Sunwoo K, Shim I, Gibb BC, Kim JS. Revisiting Fluorescent Calixarenes: From Molecular Sensors to Smart Materials. Chem Rev 2019; 119:9657-9721. [DOI: 10.1021/acs.chemrev.8b00605] [Citation(s) in RCA: 212] [Impact Index Per Article: 42.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Affiliation(s)
- Rajesh Kumar
- Department of Chemistry, Korea University, Seoul 02841, Korea
| | - Amit Sharma
- Department of Chemistry, Korea University, Seoul 02841, Korea
| | - Hardev Singh
- Department of Chemistry, Korea University, Seoul 02841, Korea
| | - Paolo Suating
- Department of Chemistry, Tulane University, New Orleans, Louisiana 70118, United States
| | - Hyeong Seok Kim
- Department of Chemistry, Korea University, Seoul 02841, Korea
| | - Kyoung Sunwoo
- Department of Chemistry, Korea University, Seoul 02841, Korea
| | - Inseob Shim
- Department of Chemistry, Korea University, Seoul 02841, Korea
| | - Bruce C. Gibb
- Department of Chemistry, Tulane University, New Orleans, Louisiana 70118, United States
| | - Jong Seung Kim
- Department of Chemistry, Korea University, Seoul 02841, Korea
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12
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Ahmadian N, Amininasab M, Mehrnejad F. Paclitaxel interaction with cucurbit [7]uril and acyclic Cucurbit[4]uril nanocontainers: A computational approach. J Mol Graph Model 2019; 90:210-218. [PMID: 31103913 DOI: 10.1016/j.jmgm.2019.05.010] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2019] [Revised: 05/10/2019] [Accepted: 05/10/2019] [Indexed: 12/16/2022]
Abstract
Paclitaxel (PTX) is a natural terpenoid compound that has been broadly studied for its antitumor activities and widely used as a chemotherapy medication. The treatment efficacy of PTX is affected by its low aqueous solubility, thus causing a subject of extensive research. In recent years, synthetic molecular containers such as cucurbit[n]urils (CB[n]s) and their derivatives have been significantly developing because of their remarkable ability to bind hydrophobic and cationic drugs. Recent experimental studies have shown that acyclic CB[n]-type containers (aCB[n]s), as new derivatives of the family of CB[n]s, increase the solubility of insoluble pharmaceuticals. However, the nature by which the drug interacts with carriers remains largely unknown. In this study, molecular docking and molecular dynamics (MD) simulation were performed to understand how CB[7] and aCB[4] nanocontainers interact with PTX which affect its aqueous solubility. The results clarify how the flexibility of containers is influenced by their structure and how this affects their interactions with PTX. Our results reveal that although both CB[7] and aCB[4] are capable of binding to PTX, the affinity to aCB[4] is higher than that of CB[7]. It has also been shown that the binding to both CB[7] and aCB[4] is probably an entropy-driven process. This research supports the potential use of the cucurbit[n]urils and their acyclic derivatives as drug delivery systems.
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Affiliation(s)
- Nasim Ahmadian
- Department of Life Science Engineering, Faculty of New Sciences and Technologies, University of Tehran, Tehran, Iran.
| | - Mehriar Amininasab
- Department of Cell and Molecular Biology, School of Biology, College of Science, University of Tehran, Tehran, Iran.
| | - Faramarz Mehrnejad
- Department of Life Science Engineering, Faculty of New Sciences and Technologies, University of Tehran, Tehran, Iran.
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13
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Ali Y, Alqudah A, Ahmad S, Abd Hamid S, Farooq U. Macromolecules as targeted drugs delivery vehicles: an overview. Des Monomers Polym 2019; 22:91-97. [PMID: 31007637 PMCID: PMC6461068 DOI: 10.1080/15685551.2019.1591681] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2018] [Accepted: 02/24/2019] [Indexed: 12/12/2022] Open
Abstract
Targeted drug delivery system improves the efficiency and safety of the therapeutic agents by managing the pharmacokinetics and pharmacodynamics of drugs. Currently, numerous drug carrier systems have been developed with different sizes, architectures and characteristics surface properties. Among different systems, macromolecules have a wide range of applications in targeted drug delivery system. The optimal drug loading potential, smooth drug releasing ability and biocompatibility are the distinguishing features that ensure the drugs delivery ability of macromolecules. This review briefly introduces some of the most commonly studied macromolecules which have been recommended as drugs delivery vehicles.
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Affiliation(s)
- Yousaf Ali
- Department of Chemistry, Sarhad University of Science and Information Technology, Peshawar, Pakistan
| | - Ali Alqudah
- Applied Biological Department, Tafila Technical University, Tafilah, Jordan
| | - Sadiq Ahmad
- Department of Pharmacy, University of Malakand, Malakand, Pakistan
| | - Shafida Abd Hamid
- Department of Chemistry, Kulliyyah of Science, International Islamic University Malaysia, Kuantan, Malaysia
| | - Umar Farooq
- Department of Pharmacy, Sarhad University of Science and Information Technology, Peshawar, Pakistan
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14
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Yilmaz M, Karanastasis AA, Chatziathanasiadou MV, Oguz M, Kougioumtzi A, Clemente N, Kellici TF, Zafeiropoulos NE, Avgeropoulos A, Mavromoustakos T, Dianzani U, Karakurt S, Tzakos AG. Inclusion of Quercetin in Gold Nanoparticles Decorated with Supramolecular Hosts Amplifies Its Tumor Targeting Properties. ACS APPLIED BIO MATERIALS 2019; 2:2715-2725. [DOI: 10.1021/acsabm.8b00748] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Affiliation(s)
- Mustafa Yilmaz
- Department of Chemistry, Selcuk University, Konya 42075, Turkey
| | - Apostolos A. Karanastasis
- Department of Materials Science Engineering, University of Ioannina, University Campus, Ioannina 45110, Greece
| | - Maria V. Chatziathanasiadou
- Laboratory of Organic Chemistry and Biochemistry, Department of Chemistry, University of Ioannina, Ioannina 45110, Greece
| | - Mehmet Oguz
- Department of Chemistry, Selcuk University, Konya 42075, Turkey
- Department of Advance Material and Nanotechnology, Selcuk University, Konya 42075, Turkey
| | - Anastasia Kougioumtzi
- Department of Biomedical Research, Institute of Molecular Biology and Biotechnology, Foundation of Research and Technology-Hellas, University of Ioannina, Ioannina 45110, Greece
| | - Nausicaa Clemente
- Dipartimento di Scienze della Salute, Università del Piemonte Orientale, Novara 28100, Italy
| | - Tahsin F. Kellici
- Laboratory of Organic Chemistry and Biochemistry, Department of Chemistry, University of Ioannina, Ioannina 45110, Greece
| | - Nikolaos E. Zafeiropoulos
- Department of Materials Science Engineering, University of Ioannina, University Campus, Ioannina 45110, Greece
| | - Apostolos Avgeropoulos
- Department of Materials Science Engineering, University of Ioannina, University Campus, Ioannina 45110, Greece
| | - Thomas Mavromoustakos
- Department of Chemistry, National and Kapodistrian University of Athens, Athens 15571, Greece
| | - Umberto Dianzani
- Dipartimento di Scienze della Salute, Università del Piemonte Orientale, Novara 28100, Italy
| | - Serdar Karakurt
- Department of Biochemistry, Selcuk University, Konya 42075, Turkey
| | - Andreas G. Tzakos
- Laboratory of Organic Chemistry and Biochemistry, Department of Chemistry, University of Ioannina, Ioannina 45110, Greece
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15
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Athar M, Ranjan P, Jha PC. A DFT study of inclusion complexes of substituted calix[n]arenes with dasatinib and lapatinib. J Mol Graph Model 2018; 84:160-165. [PMID: 29982033 DOI: 10.1016/j.jmgm.2018.06.018] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2018] [Revised: 05/22/2018] [Accepted: 06/25/2018] [Indexed: 01/02/2023]
Abstract
Herein, we have presented the results of Density Functional Theory (DFT) based calculations of inclusion complexes of lapatinib and dasatinib with calix[n]arene macrocycles. A total of 48 calix [n]arene complexes were modeled via considering varied ring sizes (n = 4,5,6,8) and upper-rim functionalization viz. SO3H, tert-Butyl, iso-Propyl, COOH, C2H5OH, and C2H5NH2. From the results of multilevel molecular docking, DFT energetics, and reactivity descriptors; it has been demonstrated that dasatinib form optimal complexes with calix 4f, 3f (-35 to -40 kcal/mol). Moreover, for lapatinib, hosts 3f, 4a, 1f, 3d have the capability to generate promising complexes (>35 kcal/mol). Based on counterpoise corrected binding energies (Ebind) and global reactivity descriptors, we anticipate that the proposed complexes can vitally be used as analogous to carrier-mediated-drug-delivery.
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Affiliation(s)
- Mohd Athar
- CCG@CUG, School of Chemical Sciences, Central University of Gujarat, Gandhinagar, 382030, Gujarat, India.
| | - Prabodh Ranjan
- CCG@CUG, School of Chemical Sciences, Central University of Gujarat, Gandhinagar, 382030, Gujarat, India.
| | - Prakash C Jha
- CCG@CUG, Centre for Applied Chemistry, Central University of Gujarat, Gandhinagar, 382030, Gujarat, India.
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Křivohlavá R, Grobárová V, Neuhöferová E, Fišerová A, Benson V. Interaction of colon cancer cells with glycoconjugates triggers complex changes in gene expression, glucose transporters and cell invasion. Mol Med Rep 2018; 17:5508-5517. [PMID: 29393416 DOI: 10.3892/mmr.2018.8490] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2017] [Accepted: 12/15/2017] [Indexed: 11/06/2022] Open
Abstract
Glycan metabolism balance is critical for cell prosperity, and macromolecule glycosylation is essential for cell communication, signaling and survival. Thus, glycotherapy may be a potential cancer treatment. The aim of the present study was to determine whether combined synthetic glycoconjugates (GCs) induce changes in gene expression that alter the survival of colon cancer cells. The current study evaluated the effect of the GCs N‑acetyl‑D‑glucosamine modified polyamidoamine dendrimer and calix[4]arene scaffold on cancer cell proliferation, apoptosis, invasion and sensitivity to immune cell‑mediated killing. Using reverse transcription‑quantitative polymerase chain reaction, the expression of genes involved in the aforementioned processes was measured. It was determined that GCs reduce the expression of the glucosaminyltransferases Mgat3 and Mgat5 responsible for surface glycosylation and employed components of the Wnt signaling pathway Wnt2B and Wnt9B. In addition, the calix[4]arene‑based GC reduced cell colony formation; this was accompanied by the downregulation of the metalloproteinase Mmp3. By contrast, the dendrimer‑based GC affected the expression of the glucose transporter components Sglt1 and Egfr1. Therefore, to the best of our knowledge, the present study is the first to reveal that N‑acetyl‑D‑glucosamine‑dendrimer/calix[4]arene GCs alter mRNA expression in a comprehensive way, resulting in the reduced malignant phenotype of the colon cancer cell line HT‑29.
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Affiliation(s)
- Romana Křivohlavá
- Laboratory of Molecular Biology and Immunology, Department of Immunology, Institute of Microbiology, Czech Academy of Sciences, 14220 Prague 4, Czech Republic
| | - Valika Grobárová
- Laboratory of Molecular Biology and Immunology, Department of Immunology, Institute of Microbiology, Czech Academy of Sciences, 14220 Prague 4, Czech Republic
| | - Eva Neuhöferová
- Laboratory of Molecular Biology and Immunology, Department of Immunology, Institute of Microbiology, Czech Academy of Sciences, 14220 Prague 4, Czech Republic
| | - Anna Fišerová
- Laboratory of Molecular Biology and Immunology, Department of Immunology, Institute of Microbiology, Czech Academy of Sciences, 14220 Prague 4, Czech Republic
| | - Veronika Benson
- Laboratory of Molecular Biology and Immunology, Department of Immunology, Institute of Microbiology, Czech Academy of Sciences, 14220 Prague 4, Czech Republic
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Athar M, Lone MY, Jha PC. Designing of calixarene based drug carrier for dasatinib, lapatinib and nilotinib using multilevel molecular docking and dynamics simulations. J INCL PHENOM MACRO 2017. [DOI: 10.1007/s10847-017-0773-x] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
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18
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Athar M, Lone MY, Jha PC. Theoretical assessment of calix[ n ]arene as drug carriers for second generation tyrosine kinase inhibitors. J Mol Liq 2017. [DOI: 10.1016/j.molliq.2017.09.113] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
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19
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Shahabi M, Raissi H. Investigation of the solvent effect, molecular structure, electronic properties and adsorption mechanism of Tegafur anticancer drug on Graphene nanosheet surface as drug delivery system by molecular dynamics simulation and density functional approach. J INCL PHENOM MACRO 2017. [DOI: 10.1007/s10847-017-0713-9] [Citation(s) in RCA: 44] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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20
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Patil S, Athare SV, Jagtap A, Kodam KM, Gejji SP, Malkhede DD. Encapsulation of rhodamine-6G within p-sulfonatocalix[n]arenes: NMR, photophysical behaviour and biological activities. RSC Adv 2016. [DOI: 10.1039/c6ra23614f] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Partial inclusion of rhodamine-6G within sulfonatocalixarene macrocycles engenders fluorescence quenching and demonstrates remarkable antiproliferative activities.
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Affiliation(s)
- Sanhita V. Patil
- Department of Chemistry
- Savitribai Phule Pune University
- Pune
- India
| | | | - Ashok Jagtap
- Department of Chemistry
- Savitribai Phule Pune University
- Pune
- India
| | - Kisan M. Kodam
- Department of Chemistry
- Savitribai Phule Pune University
- Pune
- India
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21
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Galindo-Murillo R, Aguilar-Suárez LE, Barroso-Flores J. A mixed DFT-MD methodology for the in silico development of drug releasing macrocycles. Calix and thia-calix[N]arenes as carriers for Bosutinib and Sorafenib. J Comput Chem 2015; 37:940-6. [PMID: 26714797 DOI: 10.1002/jcc.24281] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2015] [Accepted: 11/16/2015] [Indexed: 12/12/2022]
Abstract
Interaction energies between a family of 36 calix[n]arenes, their corresponding thia- analogues, and two commercially available second generation tyrosine kinase III inhibitors-Bosutinib and Sorafenib-were calculated through DFT methods at the B97D/6-31G(d,p) level of theory, based on Natural Population Analysis, for the in silico development of suitable drug carriers based on the aforementioned macrocycles which can increase their bioavailability and in turn their pharmaceutical efficiency. Molecular Dynamics simulations (production runs: +500 ns) using the General Amber Force Field were also carried out in order to assess the releasing process of these drugs in an explicit aqueous environment. In total, 144 host-guest complexes are examined. According to our results, five-membered -SO3H and i-Pr functionalized-calixarenes are the best candidates for Sorafenib-carriers while six-membered ones -SO3H and C2H4NH2 functionalized- are the lead candidates for Bosutinib-carriers.
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Affiliation(s)
- Rodrigo Galindo-Murillo
- Department of Medicinal Chemistry, College of Pharmacy, University of Utah, Salt Lake City, Utah, 84112
| | | | - Joaquín Barroso-Flores
- Centro Conjunto De Investigación En Química Sustentable UAEM-UNAM, Toluca, Estado De México, 50200, Mexico
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22
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Yousaf A, Hamid SA, Bunnori NM, Ishola AA. Applications of calixarenes in cancer chemotherapy: facts and perspectives. DRUG DESIGN DEVELOPMENT AND THERAPY 2015; 9:2831-8. [PMID: 26082613 PMCID: PMC4459628 DOI: 10.2147/dddt.s83213] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
Research on the therapeutic applications of calixarene derivatives is an emerging area of interest. The anticancer activity of various functionalized calixarenes has been reported by several research groups. Due to their superior geometric shape, calixarenes can accommodate drug molecules by forming inclusion complexes. Controlled release of anticancer drugs by calixarenes might help in targeted chemotherapy. This review summarizes the anticancer potential of the calixarenes and their drug loading properties. The potential use of calixarenes in chemoradiotherapy is also highlighted in brief.
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Affiliation(s)
- Ali Yousaf
- Kulliyyah of Science, International Islamic University Malaysia, Bandar Indera Mahkota, Malaysia
| | - Shafida Abd Hamid
- Kulliyyah of Science, International Islamic University Malaysia, Bandar Indera Mahkota, Malaysia
| | - Noraslinda M Bunnori
- Kulliyyah of Science, International Islamic University Malaysia, Bandar Indera Mahkota, Malaysia
| | - A A Ishola
- Kulliyyah of Medicine, International Islamic University Malaysia, Bandar Indera Mahkota, Malaysia
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Vinţeler E, Stan NF, Luchian R, Căinap C, Ramalho JPP, Chiş V. Conformational landscape and low lying excited states of imatinib. J Mol Model 2015; 21:84. [DOI: 10.1007/s00894-015-2639-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2014] [Accepted: 02/22/2015] [Indexed: 11/28/2022]
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24
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Stiufiuc R, Iacovita C, Stiufiuc G, Bodoki E, Chis V, Lucaciu CM. Surface mediated chiral interactions between cyclodextrins and propranolol enantiomers: a SERS and DFT study. Phys Chem Chem Phys 2015; 17:1281-9. [DOI: 10.1039/c4cp03413a] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The enantioselective interactions between β-cyclodextrin and propranolol enantiomers proved by SERS and DFT.
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Affiliation(s)
- Rares Stiufiuc
- Department of Pharmaceutical Physics-Biophysics
- Faculty of Pharmacy
- “Iuliu Hatieganu” University of Medicine and Pharmacy
- 400349 Cluj-Napoca
- Romania
| | - Cristian Iacovita
- Department of Pharmaceutical Physics-Biophysics
- Faculty of Pharmacy
- “Iuliu Hatieganu” University of Medicine and Pharmacy
- 400349 Cluj-Napoca
- Romania
| | - Gabriela Stiufiuc
- Faculty of Physics
- “Babes Bolyai” University
- 400084 Cluj-Napoca
- Romania
| | - Ede Bodoki
- Department of Analytical Chemistry
- Faculty of Pharmacy
- “Iuliu Hatieganu” University of Medicine and Pharmacy
- 400349 Cluj-Napoca
- Romania
| | - Vasile Chis
- Faculty of Physics
- “Babes Bolyai” University
- 400084 Cluj-Napoca
- Romania
| | - Constantin M. Lucaciu
- Department of Pharmaceutical Physics-Biophysics
- Faculty of Pharmacy
- “Iuliu Hatieganu” University of Medicine and Pharmacy
- 400349 Cluj-Napoca
- Romania
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