1
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Komarov K, Oh M, Nakata H, Lee S, Choi CH. UMRSF-TDDFT: Unrestricted Mixed-Reference Spin-Flip-TDDFT. J Phys Chem A 2024; 128:9526-9537. [PMID: 39415560 DOI: 10.1021/acs.jpca.4c04521] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2024]
Abstract
An unrestricted version of Mixed-Reference Spin-Flip Time-Dependent Density Functional Theory (UMRSF-TDDFT) was developed based on unrestricted Kohn-Sham orbitals (UKS) with a new molecular orbital (MO) reordering scheme. Additionally, a simple yet accurate method for estimating ⟨S2⟩ expectation values was devised. UMRSF-TDDFT was benchmarked against cases where DFT, TDDFT, and SF-TDDFT traditionally fail to provide accurate descriptions. In an application to the ground and excited states of a Be atom, UMRSF-TDDFT successfully recovers the degenerate states, with its energies slightly reduced compared to its RO counterpart, due to the additional variational flexibility of UKS. A clear difference between UMRSF and U-SF-TDDFT is evident in the bond breaking of the hydrogen fluoride system, as the latter misses an important configuration. In the case of the Jahn-Teller distortion of trimethylenemethane (TMM), the relative singlet energy compared to the triplet is lower by 0.1 and 0.2 eV for UMRSF and U-SF-TDDFT, respectively, than that of MRSF-TDDFT. The reduction in UMRSF energy is attributed to spatial orbital relaxations, whereas the reduction in U-SF-TDDFT energy results from spin contamination. Overall, the additional orbital relaxations afforded by unrestricted Kohn-Sham (UKS) orbitals in UMRSF-TDDFT lead to lower total system energies compared to their restricted open-shell counterparts. This enhancement adds a practical and accurate quantum chemical theory to the existing RO variant for addressing challenging systems where traditional quantum theories suffer.
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Affiliation(s)
- Konstantin Komarov
- Center for Quantum Dynamics, Pohang University of Science and Technology, Pohang 37673, South Korea
| | - Minseok Oh
- Department of Chemistry, Seoul National University, Seoul 151-747, South Korea
| | - Hiroya Nakata
- Fukui Institute for Fundamental Chemistry, Kyoto University, Kyoto 606-8103, Japan
| | - Seunghoon Lee
- Department of Chemistry, Seoul National University, Seoul 151-747, South Korea
| | - Cheol Ho Choi
- Department of Chemistry, Kyungpook National University, Daegu 41566, South Korea
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2
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Rishi V, Cole-Filipiak NC, Ramasesha K, McCaslin LM. Excited state electronic structure of dimethyl disulfide involved in photodissociation at ∼200 nm. Phys Chem Chem Phys 2024; 26:23986-23997. [PMID: 39240347 DOI: 10.1039/d4cp02505a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/07/2024]
Abstract
Dimethyl disulfide (DMDS), one of the smallest organic molecules with an S-S bond, serves as a model system for understanding photofragmentation in polypeptides and proteins. Prior studies of DMDS photodissociation excited at ∼266 nm and ∼248 nm have elucidated the mechanisms of S-S and C-S bond cleavage, which involve the lowest excited electronic states S1 and S2. Far less is known about the dissociation mechanisms and electronic structure of relevant excited states of DMDS excited at ∼200 nm. Herein we present calculations of the electronic structure and properties of electronic states S1-S6 accessed when DMDS is excited at ∼200 nm. Our analysis includes a comparison of theoretical and experimental UV spectra, as well as theoretically predicted one-dimensional cuts through the singlet and triplet potential energy surfaces along the S-S and C-S bond dissociation coordinates. Finally, we present calculations of spin-orbit coupling constants at the Franck-Condon geometry to assess the likelihood of ultrafast intersystem crossing. We show that choosing an accurate yet computationally efficient electronic structure method for calculating the S0-S6 potential energy surfaces along relevant dissociation coordinates is challenging due to excited states with doubly excited character and/or mixed Rydberg-valence character. Our findings demonstrate that the extended multi-state complete active space second-order perturbation theory (XMS-CASPT2) balances this computational efficiency and accuracy, as it captures both the Rydberg character of states in the Franck-Condon region and multiconfigurational character toward the bond-dissociation limits. We compare the performance of XMS-CASPT2 to a new variant of equation of motion coupled cluster theory with single, double, and perturbative triple corrections, EOM-CCSD(T)(a)*, finding that EOM-CCSD(T)(a)* significantly improves the treatment of doubly excited states compared to EOM-CCSD, but struggles to quantitatively capture asymptotic energies along bond dissociation coordinates for these states.
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Affiliation(s)
- Varun Rishi
- Combustion Research Facility, Sandia National Laboratories, Livermore, California 94550, USA.
| | - Neil C Cole-Filipiak
- Combustion Research Facility, Sandia National Laboratories, Livermore, California 94550, USA.
| | - Krupa Ramasesha
- Combustion Research Facility, Sandia National Laboratories, Livermore, California 94550, USA.
| | - Laura M McCaslin
- Combustion Research Facility, Sandia National Laboratories, Livermore, California 94550, USA.
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3
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Kabir M, Ghosh P, Gozem S. Electronic Structure Methods for Simulating Flavin's Spectroscopy and Photophysics: Comparison of Multi-reference, TD-DFT, and Single-Reference Wave Function Methods. J Phys Chem B 2024; 128:7545-7557. [PMID: 39074870 PMCID: PMC11317985 DOI: 10.1021/acs.jpcb.4c03748] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2024] [Revised: 07/14/2024] [Accepted: 07/22/2024] [Indexed: 07/31/2024]
Abstract
The use of flavins and flavoproteins in photocatalytic, sensing, and biotechnological applications has led to a growing interest in computationally modeling the excited-state electronic structure and photophysics of flavin. However, there is limited consensus regarding which computational methods are appropriate for modeling flavin's photophysics. We compare the energies of low-lying excited states of flavin computed with time-dependent density functional theory (TD-DFT), equation-of-motion coupled cluster (EOM-EE-CCSD), scaled opposite-spin configuration interaction [SOS-CIS(D)], multiconfiguration pair-density functional theory (MC-PDFT), and several multireference perturbation theory (MR-PT2) methods. In the first part, we focus on excitation energies of the first singlet excited state (S1) of five different redox and protonation states of flavin, with the goal of finding a suitable active space for MR-PT2 calculations. In the second part, we construct two sets of one-dimensional potential energy surfaces connecting the S0 and S1 equilibrium geometries (S0-S1 path) and the S1 (π,π*) and S2 (n,π*) equilibrium geometries (S1-S2 path). The first path therefore follows a Franck-Condon active mode of flavin while the second path maps crossings points between low-lying singlet and triplet states in flavin. We discuss the similarities and differences in the TD-DFT, EOM-EE-CCSD, SOS-CIS(D), MC-PDFT and MR-PT2 energy profiles along these paths. We find that (TD-)DFT methods are suitable for applications such as simulating the spectra of flavins but are inconsistent with several other methods when used for some geometry optimizations and when describing the energetics of dark (n,π*) states. MR-PT2 methods show promise for the simulation of flavin's low-lying excited states, but the selection of orbitals for the active space and the number of roots used for state averaging must be done carefully to avoid artifacts. Some properties, such as the intersystem crossing geometry and energy between the S1 (π,π*) and T2 (n,π*) states, may require additional benchmarking before they can be determined quantitatively.
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Affiliation(s)
- Mohammad
Pabel Kabir
- Department of Chemistry, Georgia State University, Atlanta, Georgia 30302, United States
| | - Paulami Ghosh
- Department of Chemistry, Georgia State University, Atlanta, Georgia 30302, United States
| | - Samer Gozem
- Department of Chemistry, Georgia State University, Atlanta, Georgia 30302, United States
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4
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Taylor JT, Tozer DJ, Curchod BFE. On the Topological Phase around Conical Intersections with Tamm-Dancoff Linear-Response Time-Dependent Density Functional Theory. J Phys Chem A 2024; 128:5314-5320. [PMID: 38919046 PMCID: PMC11247484 DOI: 10.1021/acs.jpca.4c02503] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2024] [Revised: 05/30/2024] [Accepted: 06/17/2024] [Indexed: 06/27/2024]
Abstract
Regions of nuclear-configuration space away from the Franck-Condon geometry can prove problematic for some electronic structure methods, given the propensity of such regions to possess conical intersections, i.e., (highly connected) points of degeneracy between potential energy surfaces. With the likelihood (perhaps even inevitability) for nonadiabatic dynamics simulations to explore molecular geometries in close proximity to conical intersections, it is vital that the performance of electronic structure methods is routinely examined in this context. In a recent paper [Taylor, J. T. J. Chem. Phys. 2023, 159, 214115.], the ability of linear-response time-dependent density functional theory within the adiabatic approximation (AA LR-TDDFT) to provide a proper description of conical intersections, in terms of their topology and topography, was investigated, with particular attention paid to conical intersections between two excited electronic states. For the same prototypical molecules, protonated formaldimine and pyrazine, we herein consider whether AA LR-TDDFT can correctly reproduce the topological phase accumulated by the adiabatic electronic wave function upon traversing a closed path around an excited-to-excited state conical intersection despite not using the appropriate quadratic-response nonadiabatic coupling vectors. Equally, we probe the ability of the ground-to-excited state intersection ring exhibited by AA LR-TDDFT in protonated formaldimine to give rise to a similar topological phase in spite of its incorrect dimensionality.
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Affiliation(s)
- Jack T. Taylor
- Department
of Chemistry, Durham University, South Road, Durham DH1 3LE, United Kingdom
| | - David J. Tozer
- Department
of Chemistry, Durham University, South Road, Durham DH1 3LE, United Kingdom
| | - Basile F. E. Curchod
- Centre
for Computational Chemistry, School of Chemistry, University of Bristol, Cantock’s Close, Bristol BS8 1TS, United Kingdom
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5
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Janesko BG. Multiconfigurational Correlation at DFT + U Cost: On-Site Electron-Electron Interactions Yield a Block-Localized Configuration Interaction Hamiltonian. J Phys Chem A 2024; 128:5077-5087. [PMID: 38878060 DOI: 10.1021/acs.jpca.4c02326] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/28/2024]
Abstract
This work presents a first-principles wavefunction-in-DFT approach based on the Hubbard density functional theory (DFT) + U method. This approach begins with the standard DFT reference system of noninteracting electrons and introduces an electron-electron interaction projected onto DFT+U-type atomic states. The reference system's configuration interaction Hamiltonian is block-localized to these states and can be expressed in terms of state occupation numbers, state self-energies (which correspond to unscreened Hubbard U values), and the promotion energies of doubly excited Slater determinants. Simple approximations for the promotion energies provide multiconfigurational correlation energies without requiring explicit orbital localization/transform. Numerical results for fractionally occupied chromium atom, bonded chromium dimer, dissociating covalent bonds, and large active spaces show that the approach provides beyond-zero-sum accuracy at computational cost comparable to standard DFT+U.
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Affiliation(s)
- Benjamin G Janesko
- Department of Chemistry & Biochemistry, Texas Christian University, Fort Worth, Texas 76129, United States
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6
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Wang Y, Mazziotti DA. Quantum simulation of conical intersections. Phys Chem Chem Phys 2024; 26:11491-11497. [PMID: 38587679 DOI: 10.1039/d4cp00391h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/09/2024]
Abstract
We explore the simulation of conical intersections (CIs) on quantum devices, setting the groundwork for potential applications in nonadiabatic quantum dynamics within molecular systems. The intersecting potential energy surfaces of H3+ are computed from a variance-based contracted quantum eigensolver. We show how the CIs can be correctly described on quantum devices using wavefunctions generated by the anti-Hermitian contracted Schrödinger equation ansatz, which is a unitary transformation of wavefunctions that preserves the topography of CIs. A hybrid quantum-classical procedure is used to locate the seam of CIs. Additionally, we discuss the quantum implementation of the adiabatic to diabatic transformation and its relation to the geometric phase effect. Results on noisy intermediate-scale quantum devices showcase the potential of quantum computers in dealing with problems in nonadiabatic chemistry.
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Affiliation(s)
- Yuchen Wang
- Department of Chemistry and The James Franck Institute, The University of Chicago, Chicago, Illinois 60637, USA.
| | - David A Mazziotti
- Department of Chemistry and The James Franck Institute, The University of Chicago, Chicago, Illinois 60637, USA.
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7
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Calio PB, Hermes MR, Bao JJ, Galván IF, Lindh R, Truhlar DG, Gagliardi L. Minimum-Energy Conical Intersections by Compressed Multistate Pair-Density Functional Theory. J Phys Chem A 2024; 128:1698-1706. [PMID: 38407944 DOI: 10.1021/acs.jpca.3c07048] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/27/2024]
Abstract
Compressed multistate pair-density functional theory (CMS-PDFT) is a multistate version of multiconfiguration pair-density functional theory that can capture the correct topology of coupled potential energy surfaces (PESs) around conical intersections. In this work, we develop interstate coupling vectors (ISCs) for CMS-PDFT in the OpenMolcas and PySCF/mrh electronic structure packages. Yet, the main focus of this work is using ISCs to calculate minimum-energy conical intersections (MECIs) by CMS-PDFT. This is performed using the projected constrained optimization method in OpenMolcas, which uses ISCs to restrain the iterations to the conical intersection seam. We optimize the S1/S0 MECIs for ethylene, butadiene, and benzene and show that CMS-PDFT gives smooth PESs in the vicinities of the MECIs. Furthermore, the CMS-PDFT MECIs are in good agreement with the MECI calculated by the more expensive XMS-CASPT2 method.
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Affiliation(s)
- Paul B Calio
- Department of Chemistry, Pritzker School of Molecular Engineering, James Franck Institute, Chicago Center for Theoretical Chemistry, The University of Chicago, Chicago, Illinois 60637-1403, United States
| | - Matthew R Hermes
- Department of Chemistry, Pritzker School of Molecular Engineering, James Franck Institute, Chicago Center for Theoretical Chemistry, The University of Chicago, Chicago, Illinois 60637-1403, United States
| | - Jie J Bao
- Department of Chemistry, Chemical Theory Center, and Minnesota Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455-0431, United States
| | | | - Roland Lindh
- Department of Chemistry-BMC, Uppsala University, Uppsala 75123, Sweden
| | - Donald G Truhlar
- Department of Chemistry, Chemical Theory Center, and Minnesota Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455-0431, United States
| | - Laura Gagliardi
- Department of Chemistry, Pritzker School of Molecular Engineering, James Franck Institute, Chicago Center for Theoretical Chemistry, The University of Chicago, Chicago, Illinois 60637-1403, United States
- Argonne National Laboratory, Lemont, Illinois 60439-4801, United States
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8
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Uenishi R, Boyer A, Karashima S, Humeniuk A, Suzuki T. Signatures of Conical Intersections in Extreme Ultraviolet Photoelectron Spectra of Furan Measured with 15 fs Time Resolution. J Phys Chem Lett 2024; 15:2222-2227. [PMID: 38373287 DOI: 10.1021/acs.jpclett.3c03582] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/21/2024]
Abstract
Ultrafast internal conversion of furan upon deep UV excitation at 200 nm is studied by using extreme ultraviolet time-resolved photoelectron spectroscopy with a time resolution of 15 fs. Ballistic nuclear wavepacket motion from the 1B2(ππ*) state to the ground state is fully observed using 21.7 eV probe pulses. Through the performance of a comparison with the results of electronic structure calculations at the MS(3)-CASPT2(10,10)/cc-pVTZ level of theory, the photoelectron signals from the conical intersection regions are identified.
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Affiliation(s)
- Ryuta Uenishi
- Department of Chemistry, Graduate School of Science, Kyoto University, Kitashirakawa-Oiwakecho, Sakyo-Ku, Kyoto 606-8502, Japan
| | - Alexie Boyer
- Department of Chemistry, Graduate School of Science, Kyoto University, Kitashirakawa-Oiwakecho, Sakyo-Ku, Kyoto 606-8502, Japan
| | - Shutaro Karashima
- Department of Chemistry, Graduate School of Science, Kyoto University, Kitashirakawa-Oiwakecho, Sakyo-Ku, Kyoto 606-8502, Japan
| | - Alexander Humeniuk
- Department of Chemistry, Graduate School of Science, Kyoto University, Kitashirakawa-Oiwakecho, Sakyo-Ku, Kyoto 606-8502, Japan
| | - Toshinori Suzuki
- Department of Chemistry, Graduate School of Science, Kyoto University, Kitashirakawa-Oiwakecho, Sakyo-Ku, Kyoto 606-8502, Japan
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9
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Papineau TV, Jacquemin D, Vacher M. Which Electronic Structure Method to Choose in Trajectory Surface Hopping Dynamics Simulations? Azomethane as a Case Study. J Phys Chem Lett 2024; 15:636-643. [PMID: 38205955 DOI: 10.1021/acs.jpclett.3c03014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2024]
Abstract
Nonadiabatic dynamics simulations have become a standard approach to explore photochemical reactions. Such simulations require underlying potential energy surfaces and couplings between them, calculated at a chosen level of theory, yet this aspect is rarely assessed. Here, in combination with the popular trajectory surface hopping dynamics method, we use a high-accuracy XMS-CASPT2 electronic structure level as a benchmark for assessing the performances of various post-Hartree-Fock methods (namely, CIS, ADC(2), CC2, and CASSCF) and exchange-correlation functionals (PBE, PBE0, and CAM-B3LYP) in a TD-DFT/TDA context, using the isomerization around a double bond as test case. Different relaxation pathways are identified, and the ability of the different methods to reproduce their relative importance and time scale is discussed. The results show that multireference electronic structure methods should be preferred, when studying nonadiabatic decay between excited and ground states. If not affordable, TD-DFT with TDA and hybrid functionals and ADC(2) are efficient alternatives but overestimate the nonradiative decay yield and thus may miss deexcitation pathways.
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Affiliation(s)
| | - Denis Jacquemin
- Nantes Université, CNRS, CEISAM UMR 6230, Nantes F-44000, France
- Institut Universitaire de France (IUF), Paris F-75005, France
| | - Morgane Vacher
- Nantes Université, CNRS, CEISAM UMR 6230, Nantes F-44000, France
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10
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Waddell PM, Tian L, Scavuzzo AR, Venigalla L, Scholes GD, Carrow BP. Visible light-induced palladium-carbon bond weakening in catalytically relevant T-shaped complexes. Chem Sci 2023; 14:14217-14228. [PMID: 38098701 PMCID: PMC10717500 DOI: 10.1039/d3sc02588h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2023] [Accepted: 10/26/2023] [Indexed: 12/17/2023] Open
Abstract
Triggering one-electron redox processes during palladium catalysis holds the potential to unlock new reaction mechanisms and synthetic methods not previously accessible in the typical two-electron reaction manifolds that dominate palladium catalysis. We report that T-shaped organopalladium(ii) complexes coordinated by a bulky monophosphine, a class of organometallic intermediate featured in a range of contemporary catalytic reactions, undergo blue light-promoted bond weakening leading to mild and efficient homolytic cleavage of strong Pd(ii)-C(sp3) bonds under ambient conditions. The origin of light-triggered radical formation in these systems, which lack an obvious ligand-based chromophore (i.e., π-systems), was investigated using a combination of DFT calculations, photoactinometry, and transient absorption spectroscopy. The available data suggest T-shaped organopalladium(ii) complexes manifest unusual blue light-accessible Pd-to-C(sp3) transition. The quantum efficiency and excited state lifetime of this process were unexpectedly superior compared to a prototypical (α-diimine)Pd(ii) complex featuring a low-lying, ligand-centered LUMO (π*). These results suggest coordinatively-unsaturated organopalladium(ii) compounds, catalysts in myriad catalytic processes, have untapped potential for one-electron reactivity under visible light excitation.
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Affiliation(s)
- Peter M Waddell
- Department of Chemistry, Princeton University Princeton NJ 08544 USA
| | - Lei Tian
- Department of Chemistry, Princeton University Princeton NJ 08544 USA
| | | | - Lalu Venigalla
- Department of Chemistry, University of Houston Houston TX 77204 USA
| | - Gregory D Scholes
- Department of Chemistry, Princeton University Princeton NJ 08544 USA
| | - Brad P Carrow
- Department of Chemistry, University of Houston Houston TX 77204 USA
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11
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Taylor JT, Tozer DJ, Curchod BFE. On the description of conical intersections between excited electronic states with LR-TDDFT and ADC(2). J Chem Phys 2023; 159:214115. [PMID: 38059547 DOI: 10.1063/5.0176140] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2023] [Accepted: 11/14/2023] [Indexed: 12/08/2023] Open
Abstract
Conical intersections constitute the conceptual bedrock of our working understanding of ultrafast, nonadiabatic processes within photochemistry (and photophysics). Accurate calculation of potential energy surfaces within the vicinity of conical intersections, however, still poses a serious challenge to many popular electronic structure methods. Multiple works have reported on the deficiency of methods like linear-response time-dependent density functional theory within the adiabatic approximation (AA LR-TDDFT) or algebraic diagrammatic construction to second-order [ADC(2)]-approaches often used in excited-state molecular dynamics simulations-to describe conical intersections between the ground and excited electronic states. In the present study, we focus our attention on conical intersections between excited electronic states and probe the ability of AA LR-TDDFT and ADC(2) to describe their topology and topography, using protonated formaldimine and pyrazine as two exemplar molecules. We also take the opportunity to revisit the performance of these methods in describing conical intersections involving the ground electronic state in protonated formaldimine-highlighting in particular how the intersection ring exhibited by AA LR-TDDFT can be perceived either as a (near-to-linear) seam of intersection or two interpenetrating cones, depending on the magnitude of molecular distortions within the branching space.
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Affiliation(s)
- Jack T Taylor
- Department of Chemistry, Durham University, South Road, Durham DH1 3LE, United Kingdom
| | - David J Tozer
- Department of Chemistry, Durham University, South Road, Durham DH1 3LE, United Kingdom
| | - Basile F E Curchod
- Centre for Computational Chemistry, School of Chemistry, University of Bristol, Cantock's Close, Bristol BS8 1TS, United Kingdom
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12
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Barneschi L, Kaliakin D, Huix-Rotllant M, Ferré N, Filatov Gulak M, Olivucci M. Assessment of the Electron Correlation Treatment on the Quantum-Classical Dynamics of Retinal Protonated Schiff Base Models: XMS-CASPT2, RMS-CASPT2, and REKS Methods. J Chem Theory Comput 2023; 19:8189-8200. [PMID: 37937990 DOI: 10.1021/acs.jctc.3c00879] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2023]
Abstract
We compare the performance of three different multiconfigurational wave function-based electronic structure methods and two implementations of the spin-restricted ensemble-referenced Kohn-Sham (REKS) method. The study is characterized by three features: (i) it uses a small set of quantum-classical trajectories rather than potential energy surface mapping, (ii) it focuses, exclusively, on the photoisomerization of retinal protonated Schiff base models, and (iii) it probes the effect of both methyl substitution and the increase in length of the conjugate π-system. For each tested method, the corresponding analytical gradients are used to drive the quantum-classical (Tully's FSSH method) trajectory propagation, including the recent multistate XMS-CASPT2 and RMS-CASPT2 gradients. It is shown that while CASSCF, XMS-CASPT2, and RMS-CASPT2 yield consistent photoisomerization dynamics descriptions, REKS produces, in some of these systems, qualitatively different behavior that is attributed to a flatter and topographically different excited state potential energy surface. The origin of this behavior can be traced back to the effect of the employed density functional approximation. The above studies are further expanded by benchmarking, at the CASSCF and REKS levels, the electronic structure methods using a QM/MM model of the visual pigment rhodopsin.
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Affiliation(s)
- Leonardo Barneschi
- Dipartimento di Biotecnologie, Chimica e Farmacia, Università di Siena, I-53100 Siena, Italy
| | - Danil Kaliakin
- Department of Chemistry, Bowling Green State University, Bowling Green, Ohio 43403, United States
| | - Miquel Huix-Rotllant
- Aix-Marseille Université, CNRS, Institut Chimie Radicalaire, 13013 Marseille, France
| | - Nicolas Ferré
- Aix-Marseille Université, CNRS, Institut Chimie Radicalaire, 13013 Marseille, France
| | - Michael Filatov Gulak
- Department of Chemistry, Southern Methodist University, Dallas, Texas 75275, United States
| | - Massimo Olivucci
- Dipartimento di Biotecnologie, Chimica e Farmacia, Università di Siena, I-53100 Siena, Italy
- Department of Chemistry, Bowling Green State University, Bowling Green, Ohio 43403, United States
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13
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Komarov K, Park W, Lee S, Huix-Rotllant M, Choi CH. Doubly Tuned Exchange-Correlation Functionals for Mixed-Reference Spin-Flip Time-Dependent Density Functional Theory. J Chem Theory Comput 2023; 19:7671-7684. [PMID: 37844129 DOI: 10.1021/acs.jctc.3c00884] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2023]
Abstract
It is demonstrated that significant accuracy improvements in MRSF-TDDFT can be achieved by introducing two different exchange-correlation (XC) functionals for the reference Kohn-Sham DFT and the response part of the calculations, respectively. Accordingly, two new XC functionals of doubly tuned Coulomb attenuated method-vertical excitation energy (DTCAM-VEE) and DTCAM-AEE were developed on the basis of the "adaptive exact exchange (AEE)" concept in the framework of the Coulomb-attenuating XC functionals. The values by DTCAM-VEE are in excellent agreement with those of Thiel's set [mean absolute errors (MAEs) and the interquartile range (IQR) values of 0.218 and 0.327 eV, respectively]. On the other hand, DTCAM-AEE faithfully reproduced the qualitative aspects of conical intersections (CIs) of trans-butadiene and thymine and the nonadiabatic molecular dynamics (NAMD) simulations on thymine. The latter functional also remarkably exhibited the exact 1/R asymptotic behavior of the charge-transfer state of an ethylene-tetrafluoroethylene dimer and the accurate potential energy surfaces (PESs) along the two torsional angles of retinal protonated Schiff base model with six double bonds (rPSB6). Overall, DTCAM-AEE generally performs well, as its MAE (0.237) and IQR (0.41 eV) are much improved as compared to BH&HLYP. The current idea can also be applied to other XC functionals as well as other variants of linear response theories, opening a new way of developing XC functionals.
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Affiliation(s)
- Konstantin Komarov
- Center for Quantum Dynamics, Pohang University of Science and Technology, Pohang 37673, South Korea
| | - Woojin Park
- Department of Chemistry, Kyungpook National University, Daegu 41566, South Korea
| | - Seunghoon Lee
- Department of Chemistry, Seoul National University, Seoul, 151-747, South Korea
| | | | - Cheol Ho Choi
- Department of Chemistry, Kyungpook National University, Daegu 41566, South Korea
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14
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Park W, Komarov K, Lee S, Choi CH. Mixed-Reference Spin-Flip Time-Dependent Density Functional Theory: Multireference Advantages with the Practicality of Linear Response Theory. J Phys Chem Lett 2023; 14:8896-8908. [PMID: 37767969 PMCID: PMC10561896 DOI: 10.1021/acs.jpclett.3c02296] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2023] [Accepted: 09/21/2023] [Indexed: 09/29/2023]
Abstract
The density functional theory (DFT) and linear response (LR) time-dependent (TD)-DFT are of the utmost importance for routine computations. However, the single reference formulation of DFT suffers in the description of open-shell singlet systems such as diradicals and bond-breaking. LR-TDDFT, on the other hand, finds difficulties in the modeling of conical intersections, doubly excited states, and core-level excitations. In this Perspective, we demonstrate that many of these limitations can be overcome by recently developed mixed-reference (MR) spin-flip (SF)-TDDFT, providing an alternative yet accurate route for such challenging situations. Empowered by the practicality of the LR formalism, it is anticipated that MRSF-TDDFT can become one of the major workhorses for general routine tasks.
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Affiliation(s)
- Woojin Park
- Department
of Chemistry, Kyungpook National University, Daegu 41566, South Korea
| | - Konstantin Komarov
- Center
for Quantum Dynamics, Pohang University
of Science and Technology, Pohang 37673, South Korea
| | - Seunghoon Lee
- Division
of Chemistry and Chemical Engineering, California
Institute of Technology, Pasadena, California 91125, United States
| | - Cheol Ho Choi
- Department
of Chemistry, Kyungpook National University, Daegu 41566, South Korea
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15
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Turelli M, Ciofini I, Wang Q, Ottochian A, Labat F, Adamo C. Organic compounds for solid state luminescence enhancement/aggregation induced emission: a theoretical perspective. Phys Chem Chem Phys 2023; 25:17769-17786. [PMID: 37377211 DOI: 10.1039/d3cp02364h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/29/2023]
Abstract
Organic luminophores displaying one or more forms of luminescence enhancement in solid state are extremely promising for the development and performance optimization of functional materials essential to many modern key technologies. Yet, the effort to harness their huge potential is riddled with hurdles that ultimately come down to a limited understanding of the interactions that result in the diverse molecular environments responsible for the macroscopic response. In this context, the benefits of a theoretical framework able to provide mechanistic explanations to observations, supported by quantitative predictions of the phenomenon, are rather apparent. In this perspective, we review some of the established facts and recent developments about the current theoretical understanding of solid-state luminescence enhancement (SLE) with an accent on aggregation-induced emission (AIE). A description of the macroscopic phenomenon and the questions it raises is accompanied by a discussion of the approaches and quantum chemistry methods that are more apt to model these molecular systems with the inclusion of an accurate yet efficient simulation of the local environment. A sketch of a general framework, building from the current available knowledge, is then attempted via the analysis of a few varied SLE/AIE molecular systems from literature. A number of fundamental elements are identified offering the basis for outlining design rules for molecular architectures exhibiting SLE that involve specific structural features with the double role of modulating the optical response of the luminophores and defining the environment they experience in solid state.
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Affiliation(s)
- Michele Turelli
- Chimie ParisTech, PSL University, CNRS, Institute of Chemistry for Life and Health Sciences, Theoretical Chemistry and Modeling Team, 75005 Paris, France.
| | - Ilaria Ciofini
- Chimie ParisTech, PSL University, CNRS, Institute of Chemistry for Life and Health Sciences, Theoretical Chemistry and Modeling Team, 75005 Paris, France.
| | - Qinfan Wang
- Chimie ParisTech, PSL University, CNRS, Institute of Chemistry for Life and Health Sciences, Theoretical Chemistry and Modeling Team, 75005 Paris, France.
| | - Alistar Ottochian
- Chimie ParisTech, PSL University, CNRS, Institute of Chemistry for Life and Health Sciences, Theoretical Chemistry and Modeling Team, 75005 Paris, France.
| | - Frédéric Labat
- Chimie ParisTech, PSL University, CNRS, Institute of Chemistry for Life and Health Sciences, Theoretical Chemistry and Modeling Team, 75005 Paris, France.
| | - Carlo Adamo
- Chimie ParisTech, PSL University, CNRS, Institute of Chemistry for Life and Health Sciences, Theoretical Chemistry and Modeling Team, 75005 Paris, France.
- Institut Universitaire de France, 103 Boulevard Saint Michel, F-75005 Paris, France
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16
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Komarov K, Mironov V, Lee S, Pham BQ, Gordon MS, Choi CH. High-performance strategies for the recent MRSF-TDDFT in GAMESS. J Chem Phys 2023; 158:2890476. [PMID: 37184015 DOI: 10.1063/5.0148005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2023] [Accepted: 05/02/2023] [Indexed: 05/16/2023] Open
Abstract
Multiple ERI (Electron Repulsion Integral) tensor contractions (METC) with several matrices are ubiquitous in quantum chemistry. In response theories, the contraction operation, rather than ERI computations, can be the major bottleneck, as its computational demands are proportional to the multiplicatively combined contributions of the number of excited states and the kernel pre-factors. This paper presents several high-performance strategies for METC. Optimal approaches involve either the data layout reformations of interim density and Fock matrices, the introduction of intermediate ERI quartet buffer, and loop-reordering optimization for a higher cache hit rate. The combined strategies remarkably improve the performance of the MRSF (mixed reference spin flip)-TDDFT (time-dependent density functional theory) by nearly 300%. The results of this study are not limited to the MRSF-TDDFT method and can be applied to other METC scenarios.
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Affiliation(s)
- Konstantin Komarov
- Center for Quantum Dynamics, Pohang University of Science and Technology, Pohang 37673, South Korea
| | - Vladimir Mironov
- Department of Chemistry, Kyungpook National University, Daegu 41566, South Korea
| | - Seunghoon Lee
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, USA
| | - Buu Q Pham
- Department of Chemistry and Ames Laboratory, Iowa State University, Ames, Iowa 50011, USA
| | - Mark S Gordon
- Department of Chemistry and Ames Laboratory, Iowa State University, Ames, Iowa 50011, USA
| | - Cheol Ho Choi
- Department of Chemistry, Kyungpook National University, Daegu 41566, South Korea
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17
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Nishimoto Y. Analytic first-order derivatives of CASPT2 with IPEA shift. J Chem Phys 2023; 158:2888841. [PMID: 37144712 DOI: 10.1063/5.0147611] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2023] [Accepted: 04/18/2023] [Indexed: 05/06/2023] Open
Abstract
Complete active space second-order perturbation theory (CASPT2) is useful for accurately predicting properties of complex electronic structures, but it is well known that it systematically underestimates excitation energies. The underestimation can be corrected using the ionization potential-electron affinity (IPEA) shift. In this study, analytic first-order derivatives of CASPT2 with the IPEA shift are developed. CASPT2-IPEA is not invariant with respect to rotations among active molecular orbitals, and two additional constraint conditions are necessary in the CASPT2 Lagrangian to formulate analytic derivatives. The method developed here is applied to methylpyrimidine derivatives and cytosine, and minimum energy structures and conical intersections are located. By comparing energies relative to the closed-shell ground state, we find that the agreement with experiments and high-level calculations is indeed improved by the inclusion of the IPEA shift. The agreement of geometrical parameters with high-level calculations may also be improved in some cases.
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Affiliation(s)
- Yoshio Nishimoto
- Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan
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18
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Niehaus TA. Exact non-adiabatic coupling vectors for the time-dependent density functional based tight-binding method. J Chem Phys 2023; 158:054103. [PMID: 36754796 DOI: 10.1063/5.0136838] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023] Open
Abstract
We report on non-adiabatic coupling vectors between electronic excited states for the time-dependent-density functional theory based tight-binding (TD-DFTB) method. The implementation includes orbital relaxation effects that have been previously neglected and covers also the case of range-separated exchange-correlation functionals. Benchmark calculations with respect to first principles TD-DFT highlight the large dependence of non-adiabatic couplings on the functional. Closer investigations of the topology around a conical intersection between excited states show that TD-DFTB delivers near-exact values of the Berry phase, which paves the way for consistent non-adiabatic molecular dynamics simulations for large systems.
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Affiliation(s)
- Thomas A Niehaus
- University Lyon, Université Claude Bernard Lyon 1, CNRS, Institut Lumière Matière, F-69622 Villeurbanne, France
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19
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Wang M, Fang WH, Li C. Assessment of State-Averaged Driven Similarity Renormalization Group on Vertical Excitation Energies: Optimal Flow Parameters and Applications to Nucleobases. J Chem Theory Comput 2023; 19:122-136. [PMID: 36534617 DOI: 10.1021/acs.jctc.2c00966] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
We present a comprehensive excited-state benchmark for the state-averaged (SA) driven similarity renormalization group (DSRG) [Li, C.; Evangelista, F. A. J. Chem. Phys. 2018, 148, 124106]. Following the QUEST database [Véril, M.; Scemama, A.; Caffarel, M.; Lipparini, F.; Boggio-Pasqua, M.; Jacquemin, D.; Loos, P.-F. Wiley Interdiscip. Rev. Comput. Mol. Sci. 2021, 11, e1517], 280 vertical transition energies of 35 medium-sized molecules are computed using the SA-DSRG derived second- and third-order perturbation theories (PT2/PT3) along with a nonperturbative approach [sq-LDSRG(2)]. Comparing to the theoretical best estimates, the optimal flow parameter is found to be 0.35 and 2.0 Eh-2 for SA-DSRG-PT2 and SA-DSRG-PT3, respectively. For SA-sq-LDSRG(2), a flow parameter of 1.5 Eh-2 provides converged equations without compromising the accuracy. We then assess the accuracy of the SA-DSRG hierarchy using these parameters. The SA-DSRG-PT2 scheme outperforms the level-shifted CASPT2 by 0.10 eV in mean absolute error (MAE), yet this accuracy is slightly inferior than that of CASPT2 with the ionization-potential-electron-affinity shift. Both SA-DSRG-PT3 and SA-sq-LDSRG(2) yield a MAE of 0.10 eV, which is comparable to that of CASPT3 (0.09 eV). Finally, we compute vertical excitation energies of several low-lying singlet states of nucleobases. The SA-sq-LDSRG(2) approach provides highly accurate results for π → π* excitations, while n → π* transitions are better described by SA-DSRG-PT3.
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Affiliation(s)
- Meng Wang
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University, Beijing 100875, China
| | - Wei-Hai Fang
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University, Beijing 100875, China
| | - Chenyang Li
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University, Beijing 100875, China
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20
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Abou Taka A, Corzo HH, Pribram Jones A, Hratchian HP. Good Vibrations: Calculating Excited-State Frequencies Using Ground-State Self-Consistent Field Models. J Chem Theory Comput 2022; 18:7286-7297. [PMID: 36445860 DOI: 10.1021/acs.jctc.2c00672] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/02/2022]
Abstract
The use of Δ-self-consistent field (SCF) approaches for studying excited electronic states has received a renewed interest in recent years. In this work, the use of this scheme for calculating excited-state vibrational frequencies is examined. Results from Δ-SCF calculations for a set of representative molecules are compared with those obtained using configuration interaction with single substitutions (CIS) and time-dependent density functional theory (TD-DFT) methods. The use of an approximate spin purification model is also considered for cases where the excited-state SCF solution is spin-contaminated. The results of this work demonstrate that an SCF-based description of an excited-state potential energy surface can be an accurate and cost-effective alternative to CIS and TD-DFT methods.
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Affiliation(s)
- Ali Abou Taka
- Department of Chemistry and Biochemistry and Center for Chemical Computation and Theory, University of California, Merced, California95343, United States.,Combustion Research Facility, Sandia National Laboratories, Livermore, California94550, United States
| | - Hector H Corzo
- Department of Chemistry and Biochemistry and Center for Chemical Computation and Theory, University of California, Merced, California95343, United States.,National Center for Computational Sciences, Oak Ridge Leadership Computing Facility, Oak Ridge National laboratory, Oak Ridge, Tennessee37831-6012, United States
| | - Aurora Pribram Jones
- Department of Chemistry and Biochemistry and Center for Chemical Computation and Theory, University of California, Merced, California95343, United States
| | - Hrant P Hratchian
- Department of Chemistry and Biochemistry and Center for Chemical Computation and Theory, University of California, Merced, California95343, United States
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21
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Abstract
Chemiluminescence (CL) utilizing chemiexcitation for energy transformation is one of the most highly sensitive and useful analytical techniques. The chemiexcitation is a chemical process of a ground-state reactant producing an excited-state product, in which a nonadiabatic event is facilitated by conical intersections (CIs), the specific molecular geometries where electronic states are degenerated. Cyclic peroxides, especially 1,2-dioxetane/dioxetanone derivatives, are the iconic chemiluminescent substances. In this Perspective, we concentrated on the CIs in the CL of cyclic peroxides. We first present a computational overview on the role of CIs between the ground (S0) state and the lowest singlet excited (S1) state in the thermolysis of cyclic peroxides. Subsequently, we discuss the role of the S0/S1 CI in the CL efficiency and point out misunderstandings in some theoretical studies on the singlet chemiexcitations of cyclic peroxides. Finally, we address the challenges and future prospects in theoretically calculating S0/S1 CIs and simulating the dynamics and chemiexcitation efficiency in the CL of cyclic peroxides.
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Affiliation(s)
- Ling Yue
- Key Laboratory for Non-equilibrium Synthesis and Modulation of Condensed Matter, Ministry of Education, School of Chemistry, Xi'an Jiaotong University, Xi'an, Shaanxi710049, China
| | - Ya-Jun Liu
- Center for Advanced Materials Research, Beijing Normal University, Zhuhai519087, China
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University, Beijing100875, China
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22
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Hanscam R, Neuscamman E. Applying Generalized Variational Principles to Excited-State-Specific Complete Active Space Self-consistent Field Theory. J Chem Theory Comput 2022; 18:6608-6621. [PMID: 36215108 DOI: 10.1021/acs.jctc.2c00639] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
We employ a generalized variational principle to improve the stability, reliability, and precision of fully excited-state-specific complete active space self-consistent field theory. Compared to previous approaches that similarly seek to tailor this ansatz's orbitals and configuration interaction expansion for an individual excited state, we find the present approach to be more resistant to root flipping and better at achieving tight convergence to an energy stationary point. Unlike state-averaging, this approach allows orbital shapes to be optimal for individual excited states, which is especially important for charge-transfer states and some doubly excited states. We demonstrate the convergence and state-targeting abilities of this method in LiH, ozone, and MgO, showing in the latter that it is capable of finding three excited-state energy stationary points that no previous method has been able to locate.
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Affiliation(s)
- Rebecca Hanscam
- Department of Chemistry, University of California, Berkeley, California 94720, United States
| | - Eric Neuscamman
- Department of Chemistry, University of California, Berkeley, California 94720, United States.,Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
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23
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Yue L. Trajectory surface hopping molecular dynamics on Chemiluminescence of cyclic peroxides. J CHIN CHEM SOC-TAIP 2022. [DOI: 10.1002/jccs.202200329] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- Ling Yue
- Key Laboratory for Non‐Equilibrium Synthesis and Modulation of Condensed Matter, Ministry of Education, School of Chemistry Xi'an Jiaotong University Xi'an China
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24
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Huang X, Domcke W. Ab initio trajectory surface-hopping dynamics studies of excited-state proton-coupled electron transfer reactions in trianisoleheptazine-phenol complexes. Phys Chem Chem Phys 2022; 24:15925-15936. [PMID: 35726762 DOI: 10.1039/d2cp01262f] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The excited-state proton-coupled electron-transfer (PCET) reaction in hydrogen-bonded complexes of trianisoleheptazine (TAHz), a chromophore related to polymeric carbon nitrides widely used in hydrogen-evolution photocatalysis, with several phenol derivatives were recently studied by Schlenker and coworkers with time-resolved photoluminescence quenching and pump-probe experiments. A pronounced dependence of the PCET reactivity on the electron-donating/electron-withdrawing character of the substituents on phenol was found, with indications of a barrierless or nearly barrierless PCET reaction for the most strongly electron-donating substituent, methoxy. In the present work, the excited-state PCET dynamics was explored with first-principles nonadiabatic dynamics simulations using the TDDFT/ωB97X-D electronic-structure model for two selected complexes, TAHz-phenol and TAHz-methoxyphenol. The qualitative reliability of the TDDFT/ωB97X-D electronic-structure model was assessed by extensive benchmarking of excitation energies and potential-energy profiles against a wave-function-based ab initio method, the algebraic-diagrammatic construction of second order (ADC(2)). The nonadiabatic dynamics simulations provide temporally and structurally resolved insights into paradigmatic PCET reactions in TAHz-phenol complexes. The radiationless relaxation of the photoexcited bright 1ππ* state to the long-lived dark S1 state of TAHz occurs in less than 100 fs. The ensuing PCET reaction on the adiabatic S1 surface is faster in TAHz-methoxyphenol complexes than in TAHz-phenol complexes due to a lower H-atom-transfer barrier, as observed in the experiments. The relaxation of the complexes to the electronic ground state is found to occur exclusively via PCET within the 250 fs time window covered by the present simulations, confirming the essential role of the hydrogen bond for the fluorescence quenching process. The absolute values of the computed PCET time constants are significantly shorter than those extracted from time-resolved photoluminescence measurements for mixtures of TAHz with phenolic substrates in toluene. The possible origins of this discrepancy are discussed.
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Affiliation(s)
- Xiang Huang
- Department of Chemistry, Technical University of Munich, D-85747 Garching, Germany.
| | - Wolfgang Domcke
- Department of Chemistry, Technical University of Munich, D-85747 Garching, Germany.
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25
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Nishimoto Y, Battaglia S, Lindh R. Analytic First-Order Derivatives of (X)MS, XDW, and RMS Variants of the CASPT2 and RASPT2 Methods. J Chem Theory Comput 2022; 18:4269-4281. [PMID: 35699280 DOI: 10.1021/acs.jctc.2c00301] [Citation(s) in RCA: 21] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Crossings between states involve complex electronic structures, making the accurate characterization of the crossing point difficult. In this study, the analytic derivatives of three complete active space second-order perturbation theory (CASPT2) variants as well as an extension of the restricted active space (RASPT2) are developed. These variants are applied to locating minimum energy conical intersections. Our results demonstrate that the three CASPT2 variants predict qualitatively similar results, but a recently developed variant, the rotated multistate CASPT2 (RMS-CASPT2), is least sensitive to the number of states considered in the calculation. We demonstrate that CASPT2 and the reference self-consistent field calculations predict qualitatively different energetics and bond lengths.
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Affiliation(s)
- Yoshio Nishimoto
- Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan
| | - Stefano Battaglia
- Department of Chemistry - BMC, Uppsala University, P.O. Box 576, SE-75123 Uppsala, Sweden
| | - Roland Lindh
- Department of Chemistry - BMC, Uppsala University, P.O. Box 576, SE-75123 Uppsala, Sweden
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26
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Wang Y, Seritan S, Lahana D, Ford JE, Valentini A, Hohenstein EG, Martínez TJ. InteraChem: Exploring Excited States in Virtual Reality with Ab Initio Interactive Molecular Dynamics. J Chem Theory Comput 2022; 18:3308-3317. [PMID: 35649124 DOI: 10.1021/acs.jctc.2c00005] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Abstract
InteraChem is an ab initio interactive molecular dynamics (AI-IMD) visualizer that leverages recent advances in virtual reality hardware and software, as well as the graphical processing unit (GPU)-accelerated TeraChem electronic structure package, in order to render quantum chemistry in real time. We introduce the exploration of electronically excited states via AI-IMD using the floating occupation molecular orbital-complete active space configuration interaction method. The optimization tools in InteraChem enable identification of excited state minima as well as minimum energy conical intersections for further characterization of excited state chemistry in small- to medium-sized systems. We demonstrate that finite-temperature Hartree-Fock theory is an efficient method to perform ground state AI-IMD. InteraChem allows users to track electronic properties such as molecular orbitals and bond order in real time, resulting in an interactive visualization tool that aids in the interpretation of excited state chemistry data and makes quantum chemistry more accessible for both research and educational purposes.
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Affiliation(s)
- Yuanheng Wang
- Department of Chemistry and The PULSE Institute, Stanford University, Stanford, California 94305, United States.,SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, United States
| | - Stefan Seritan
- Department of Chemistry and The PULSE Institute, Stanford University, Stanford, California 94305, United States.,SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, United States
| | - Dean Lahana
- Department of Chemistry and The PULSE Institute, Stanford University, Stanford, California 94305, United States.,SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, United States
| | - Jason E Ford
- Department of Chemistry and The PULSE Institute, Stanford University, Stanford, California 94305, United States.,SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, United States
| | - Alessio Valentini
- Department of Chemistry and The PULSE Institute, Stanford University, Stanford, California 94305, United States.,SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, United States
| | - Edward G Hohenstein
- Department of Chemistry and The PULSE Institute, Stanford University, Stanford, California 94305, United States.,SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, United States
| | - Todd J Martínez
- Department of Chemistry and The PULSE Institute, Stanford University, Stanford, California 94305, United States.,SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, California 94025, United States
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27
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Xie BB, Wang KX, Jia PK, Liu XY, Cui G. Excited-state double proton transfer of 1,8-dihydroxy-2-naphthaldehyde: A MS-CASPT2//CASSCF study. CHINESE J CHEM PHYS 2022. [DOI: 10.1063/1674-0068/cjcp2109163] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
Abstract
Excited-state double proton transfer (ESDPT) is a controversial issue which has long been plagued with theoretical and experimental communities. Herein, we took 1,8-dihydroxy-2-naphthaldehyde (DHNA) as a prototype and used combined complete active space self-consistent field (CASSCF) and multi-state complete active-space second-order perturbation (MS-CASPT2) methods to investigate ES-DPT and excited-state deactivation pathways of DHNA. Three different tautomer minima of S1-ENOL, S1-KETO-1, and S1-KETO-2 and two crucial conical intersections of S1S0-KETO-1 and S1S0-KETO-2 in.and between the S0 and S1 states were obtained. S1-KETO-1 and S1-KETO-2 should take responsibility for experimentally observing dual-emission bands. In addition, two-dimensional potential energy surfaces (2D-PESs) and linear interpolated internal coordinate paths connecting relevant structures were calculated at the MS-CASPT2//CASSCF level and confirmed a stepwise ESDPT mechanism. Specifically, the first proton transfer from S1-ENOL to S1-KETO-1 is barrierless, whereas the second one from S1-KETO-1 to S1-KETO-2 demands a barrier of ca. 6.0 kcal/mol. The linear interpolated internal coordinate path connecting S1-KETO-1 (S1-KETO-2) and S1S0-KETO-1 (S1S0-KETO-2) is uphill with a barrier of ca. 12.0 kcal/mol, which will trap DHNA in the S1 state while therefore enabling dual-emission bands. On the other hand, the S1/S0 conical intersections would also prompt the S1 system to decay to the S0 state, which could be to certain extent suppressed by locking the rotation of the C5−C8−C9−O10 dihedral angle. These mechanistic insights are not only helpful for understanding ESDPT but also useful for designing novel molecular materials with excellent photoluminescent performances.
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Affiliation(s)
- Bin-Bin Xie
- Hangzhou Institute of Advanced Studies, Zhejiang Normal University, Hangzhou 311231, China
| | - Ke-Xin Wang
- Hangzhou Institute of Advanced Studies, Zhejiang Normal University, Hangzhou 311231, China
| | - Pei-Ke Jia
- Hangzhou Institute of Advanced Studies, Zhejiang Normal University, Hangzhou 311231, China
| | - Xiang-Yang Liu
- College of Chemistry and Material Science, Sichuan Normal University, Chengdu 610068, China
| | - Ganglong Cui
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education College of Chemistry, Beijing Normal University, Beijing 100875, China
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28
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Lee IS, Min SK. Generalized Formulation of the Density Functional Tight Binding-Based Restricted Ensemble Kohn-Sham Method with Onsite Correction to Long-Range Correction. J Chem Theory Comput 2022; 18:3391-3409. [PMID: 35549266 DOI: 10.1021/acs.jctc.2c00037] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We present a generalized formulation for the combination of the density functional tight binding (DFTB) approach and the state-interaction state-average spin-restricted ensemble-referenced Kohn-Sham (SI-SA-REKS or SSR) method by considering onsite correction (OC) as well as the long-range corrected (LC) functional. The OC contribution provides more accurate energies and analytic gradients for individual microstates, while the multireference character of the SSR provides the correct description for conical intersections. We benchmark the LC-OC-DFTB/SSR method against various DFTB calculation methods for excitation energies and conical intersection structures with π/π* or n/π* characters. Furthermore, we perform excited-state molecular dynamics simulations with a molecular rotary motor with variations of LC-OC-DFTB/SSR approaches. We show that the OC contribution to the LC functional is crucial to obtain the correct geometry of conical intersections.
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Affiliation(s)
- In Seong Lee
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Ulju-gun, Ulsan 44919, South Korea
| | - Seung Kyu Min
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Ulju-gun, Ulsan 44919, South Korea
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29
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T. do Casal M, Toldo JM, Pinheiro Jr M, Barbatti M. Fewest switches surface hopping with Baeck-An couplings. OPEN RESEARCH EUROPE 2022; 1:49. [PMID: 37645211 PMCID: PMC10446015 DOI: 10.12688/openreseurope.13624.2] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 03/01/2022] [Indexed: 08/31/2023]
Abstract
In the Baeck-An (BA) approximation, first-order nonadiabatic coupling vectors are given in terms of adiabatic energy gaps and the second derivative of the gaps with respect to the coupling coordinate. In this paper, a time-dependent (TD) BA approximation is derived, where the couplings are computed from the energy gaps and their second time-derivatives. TD-BA couplings can be directly used in fewest switches surface hopping, enabling nonadiabatic dynamics with any electronic structure methods able to provide excitation energies and energy gradients. Test results of surface hopping with TD-BA couplings for ethylene and fulvene show that the TD-BA approximation delivers a qualitatively correct picture of the dynamics and a semiquantitative agreement with reference data computed with exact couplings. Nevertheless, TD-BA does not perform well in situations conjugating strong couplings and small velocities. Considered the uncertainties in the method, TD-BA couplings could be a competitive approach for inexpensive, exploratory dynamics with a small trajectories ensemble. We also assessed the potential use of TD-BA couplings for surface hopping dynamics with time-dependent density functional theory (TDDFT), but the results are not encouraging due to singlet instabilities near the crossing seam with the ground state.
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T. do Casal M, Toldo JM, Pinheiro Jr M, Barbatti M. Fewest switches surface hopping with Baeck-An couplings. OPEN RESEARCH EUROPE 2022; 1:49. [PMID: 37645211 PMCID: PMC10446015 DOI: 10.12688/openreseurope.13624.1] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 03/01/2022] [Indexed: 03/12/2024]
Abstract
In the Baeck-An (BA) approximation, first-order nonadiabatic coupling vectors are given in terms of adiabatic energy gaps and the second derivative of the gaps with respect to the coupling coordinate. In this paper, a time-dependent (TD) BA approximation is derived, where the couplings are computed from the energy gaps and their second time-derivatives. TD-BA couplings can be directly used in fewest switches surface hopping, enabling nonadiabatic dynamics with any electronic structure methods able to provide excitation energies and energy gradients. Test results of surface hopping with TD-BA couplings for ethylene and fulvene show that the TD-BA approximation delivers a qualitatively correct picture of the dynamics and a semiquantitative agreement with reference data computed with exact couplings. Nevertheless, TD-BA does not perform well in situations conjugating strong couplings and small velocities. Considered the uncertainties in the method, TD-BA couplings could be a competitive approach for inexpensive, exploratory dynamics with a small trajectories ensemble. We also assessed the potential use of TD-BA couplings for surface hopping dynamics with time-dependent density functional theory (TDDFT), but the results are not encouraging due to singlet instabilities near the crossing seam with the ground state.
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31
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Carpenter BK, Ellison GB, Nimlos MR, Scheer AM. A Conical Intersection Influences the Ground State Rearrangement of Fulvene to Benzene. J Phys Chem A 2022; 126:1429-1447. [PMID: 35191307 DOI: 10.1021/acs.jpca.2c00038] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The rearrangement of fulvene to benzene is believed to play an important role in the formation of soot during hydrocarbon combustion. Previous work has identified two possible mechanisms for the rearrangement─a unimolecular path and a hydrogen-atom-assisted, bimolecular path. Computational results to date have suggested that the unimolecular mechanism faces a barrier of about 74 kcal/mol, which makes it unable to compete with the bimolecular mechanism under typical combustion conditions. This computed barrier is about 10 kcal/mol higher than the experimental value, which is an unusually large discrepancy for modern electronic structure theory. In the present work, we have reinvestigated the unimolecular mechanism computationally, and we have found a second transition state that is approximately 10 kcal/mol lower in energy than the previously identified one and, therefore, in excellent agreement with the experimental value. The existence of two transition states for the same rearrangement arises because there is a conical intersection between the two lowest singlet states which occurs in the vicinity of the reaction coordinates. The two possible paths around the cone on the lower adiabatic surface give rise to the two distinct saddle points. The lower barrier for the unimolecular mechanism now makes it competitive with the bimolecular one, according to our calculations. In support of this conclusion, we have reanalyzed some previous experimental results on anisole pyrolysis, which leads to benzene as a significant product and have shown that the unimolecular and bimolecular mechanisms for fulvene → benzene must be occurring competitively in that system. Finally, we have identified that similar conical intersections arise during the isomerizations of benzofulvene and isobenzofulvene to naphthalene.
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Affiliation(s)
- Barry K Carpenter
- School of Chemistry, Cardiff University, Main Building, Park PL, Cardiff CF10 3AT, U.K
| | - G Barney Ellison
- Department of Chemistry, University of Colorado, Boulder, Colorado 80309, United States
| | - Mark R Nimlos
- National Renewable Energy Laboratory, 15013 Denver West Parkway, Golden, Colorado 80401, United States
| | - Adam M Scheer
- Recurve Inc., 4014 South Lemay Avenue, Unit 22, Fort Collins, Colorado 80525, United States
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32
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Park JW. Analytical Gradient Theory for Spin-Free State-Averaged Second-Order Driven Similarity Renormalization Group Perturbation Theory (SA-DSRG-MRPT2) and Its Applications for Conical Intersection Optimizations. J Chem Theory Comput 2022; 18:2233-2245. [PMID: 35229599 DOI: 10.1021/acs.jctc.1c01150] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Second-order multireference-driven similarity renormalization group perturbation theory (DSRG-MRPT2) provides an efficient means of correcting the dynamical correlation with the multiconfiguration reference function. The state-averaged DSRG-MRPT2 (SA-DSRG-MRPT2) method is the simplest means of treating the excited states with DSRG-MRPT2. In this method, the Hamiltonian dressed with dynamical correlation is diagonalized in the CASCI state subspace (SA-DSRG-MRPT2c) or the configuration subspace (SA-DSRG-MRPT2). This work develops analytical gradient theory for spin-free SA-DSRG-MRPT2(c) with the density-fitting approximation. We check the accuracy of the analytical gradients against the numerical gradients. We present applications for optimizing minimum energy conical intersections (MECI) of ethylene and retinal model chromophores (PSB3 and RPSB6). We investigate the dependence of the optimized geometries and energies on the flow parameters and reference relaxations. The smoothness of the SA-DSRG-MRPT2(c) potential energy surfaces near the reference (complete active space self-consistent field) MECI is comparable to the XMCQDPT2 one. These results render SA-DSRG-MRPT2(c) theory a promising approach for studies of conical intersections.
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Affiliation(s)
- Jae Woo Park
- Department of Chemistry, Chungbuk National University (CBNU), Cheongju 28644, Korea
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33
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Yalouz S, Koridon E, Senjean B, Lasorne B, Buda F, Visscher L. Analytical Nonadiabatic Couplings and Gradients within the State-Averaged Orbital-Optimized Variational Quantum Eigensolver. J Chem Theory Comput 2022; 18:776-794. [PMID: 35029988 DOI: 10.1021/acs.jctc.1c00995] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
We introduce several technical and analytical extensions to our recent state-averaged orbital-optimized variational quantum eigensolver (SA-OO-VQE) algorithm (see Yalouz et al. Quantum Sci. Technol. 2021, 6, 024004). Motivated by the limitations of current quantum computers, the first extension consists of an efficient state-resolution procedure to find the SA-OO-VQE eigenstates, and not just the subspace spanned by them, while remaining in the equi-ensemble framework. This approach avoids expensive intermediate resolutions of the eigenstates by postponing this problem to the very end of the full algorithm. The second extension allows for the estimation of analytical gradients and nonadiabatic couplings, which are crucial in many practical situations ranging from the search of conical intersections to the simulation of quantum dynamics, in, for example, photoisomerization reactions. The accuracy of our new implementations is demonstrated on the formaldimine molecule CH2NH (a minimal Schiff base model relevant for the study of photoisomerization in larger biomolecules), for which we also perform a geometry optimization to locate a conical intersection between the ground and first-excited electronic states of the molecule.
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Affiliation(s)
- Saad Yalouz
- Laboratoire de Chimie Quantique, Institut de Chimie, CNRS/Université de Strasbourg, 4 rue Blaise Pascal, Strasbourg, 67000, France
| | - Emiel Koridon
- Theoretical Chemistry, Vrije Universiteit, De Boelelaan 1083, Amsterdam, NL-1081 HV, The Netherlands.,Instituut-Lorentz, Universiteit Leiden, P.O. Box 9506, Leiden, 2300 RA, The Netherlands
| | - Bruno Senjean
- CGM, Univ Montpellier, CNRS, ENSCM, Montpellier, 34070, France
| | | | - Francesco Buda
- Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, P.O. Box 9502, Leiden, 2300 RA, The Netherlands
| | - Lucas Visscher
- Theoretical Chemistry, Vrije Universiteit, De Boelelaan 1083, Amsterdam, NL-1081 HV, The Netherlands
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34
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Xie BB, Tang XF, Liu XY, Chang XP, Cui G. Mechanistic photophysics and photochemistry of unnatural bases and sunscreen molecules: insights from electronic structure calculations. Phys Chem Chem Phys 2021; 23:27124-27149. [PMID: 34849517 DOI: 10.1039/d1cp03994f] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Photophysics and photochemistry are basic subjects in the study of light-matter interactions and are ubiquitous in diverse fields such as biology, energy, materials, and environment. A full understanding of mechanistic photophysics and photochemistry underpins many recent advances and applications. This contribution first provides a short discussion on the theoretical calculation methods we have used in relevant studies, then we introduce our latest progress on the mechanistic photophysics and photochemistry of two classes of molecular systems, namely unnatural bases and sunscreens. For unnatural bases, we disclose the intrinsic driving forces for the ultrafast population to reactive triplet states, impacts of the position and degree of chalcogen substitutions, and the effects of complex environments. For sunscreen molecules, we reveal the photoprotection mechanisms that dissipate excess photon energy to the surroundings by ultrafast internal conversion to the ground state. Finally, relevant theoretical challenges and outlooks are discussed.
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Affiliation(s)
- Bin-Bin Xie
- Hangzhou Institute of Advanced Studies, Zhejiang Normal University, 1108 Gengwen Road, Hangzhou 311231, Zhejiang, P. R. China.
| | - Xiu-Fang Tang
- Hangzhou Institute of Advanced Studies, Zhejiang Normal University, 1108 Gengwen Road, Hangzhou 311231, Zhejiang, P. R. China.
| | - Xiang-Yang Liu
- College of Chemistry and Material Science, Sichuan Normal University, Chengdu, Sichuan, 610068, China
| | - Xue-Ping Chang
- College of Chemistry and Chemical Engineering, Xinyang Normal University, Xinyang 464000, P. R. China
| | - Ganglong Cui
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education College of Chemistry, Beijing Normal University, Beijing 100875, P. R. China.
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35
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Lee S, Park W, Nakata H, Filatov M, Choi CH. Recent advances in ensemble density functional theory and linear response theory for strong correlation. B KOREAN CHEM SOC 2021. [DOI: 10.1002/bkcs.12429] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Affiliation(s)
- Seunghoon Lee
- Division of Chemistry and Chemical Engineering California Institute of Technology Pasadena California USA
| | - Woojin Park
- Department of Chemistry Kyungpook National University Daegu South Korea
| | - Hiroya Nakata
- Department of Chemistry Kyungpook National University Daegu South Korea
| | - Michael Filatov
- Department of Chemistry Kyungpook National University Daegu South Korea
| | - Cheol Ho Choi
- Department of Chemistry Kyungpook National University Daegu South Korea
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36
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Wang J, Durbeej B. Thermal Fluctuations in Conjugation and their Effect on Calculated Excitation Energies: A Case Study on the Astaxanthin Carotenoid. CHEMPHOTOCHEM 2021. [DOI: 10.1002/cptc.202100178] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Jun Wang
- Jiangsu Key Laboratory for Chemistry of Low-Dimensional Materials Jiangsu Engineering Laboratory for Environment Functional Materials School of Chemistry and Chemical Engineering Huaiyin Normal University No. 111 West Changjiang Road 223300 Huaian Jiangsu Province China
| | - Bo Durbeej
- Division of Theoretical Chemistry IFM Linköping University 581 83 Linköping Sweden
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Matsika S. Electronic Structure Methods for the Description of Nonadiabatic Effects and Conical Intersections. Chem Rev 2021; 121:9407-9449. [PMID: 34156838 DOI: 10.1021/acs.chemrev.1c00074] [Citation(s) in RCA: 61] [Impact Index Per Article: 20.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Nonadiabatic effects are ubiquitous in photophysics and photochemistry, and therefore, many theoretical developments have been made to properly describe them. Conical intersections are central in nonadiabatic processes, as they promote efficient and ultrafast nonadiabatic transitions between electronic states. A proper theoretical description requires developments in electronic structure and specifically in methods that describe conical intersections between states and nonadiabatic coupling terms. This review focuses on the electronic structure aspects of nonadiabatic processes. We discuss the requirements of electronic structure methods to describe conical intersections and nonadiabatic couplings, how the most common excited state methods perform in describing these effects, and what the recent developments are in expanding the methodology and implementing nonadiabatic couplings.
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Affiliation(s)
- Spiridoula Matsika
- Department of Chemistry, Temple University, Philadelphia, Pennsylvania 19122, United States
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38
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Nishimoto Y. Analytic gradients for restricted active space second-order perturbation theory (RASPT2). J Chem Phys 2021; 154:194103. [PMID: 34240887 DOI: 10.1063/5.0050074] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023] Open
Abstract
The computational cost of analytic derivatives in multireference perturbation theory is strongly affected by the size of the active space employed in the reference self-consistent field calculation. To overcome previous limits on the active space size, the analytic gradients of single-state restricted active space second-order perturbation theory (RASPT2) and its complete active space second-order perturbation theory (CASPT2) have been developed and implemented in a local version of OpenMolcas. Similar to previous implementations of CASPT2, the RASPT2 implementation employs the Lagrangian or Z-vector method. The numerical results show that restricted active spaces with up to 20 electrons in 20 orbitals can now be employed for geometry optimizations.
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Affiliation(s)
- Yoshio Nishimoto
- Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan
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39
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Lee S, Horbatenko Y, Filatov M, Choi CH. Fast and Accurate Computation of Nonadiabatic Coupling Matrix Elements Using the Truncated Leibniz Formula and Mixed-Reference Spin-Flip Time-Dependent Density Functional Theory. J Phys Chem Lett 2021; 12:4722-4728. [PMID: 33983029 DOI: 10.1021/acs.jpclett.1c00932] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
We present a fast and accurate numerical algorithm for computing the first-order nonadiabatic coupling matrix element (NACME). The algorithm employs the truncated Leibniz formula (TLF) approximation within the finite-difference method, which makes it easily applicable in connection with any wave function-based methodology. In this work, we used the algorithm in connection with the recently developed mixed-reference spin-flip time-dependent density functional theory (MRSF-TDDFT, MRSF for brevity). The accuracy is assessed for NACME between the singlet electronic states of a dissociating hydrogen molecule. It is demonstrated that an intermediate approximation, TLF(1), affords a negligible numeric error on the order of ∼10-10 a.u. while enabling a fast computation of NACME. As the MRSF method yields the correct description of the dissociation curves of H2 for all the electronic states involved, the numeric TLF(1)/MRSF NACME values are in excellent agreement with the reference analytical values obtained by the full configuration interaction. For polyatomic molecules, the MRSF NAC vectors agree very closely with the MRCISD NAC vectors. Hence, the proposed protocol is a promising tool for the evaluation of NACMEs.
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Affiliation(s)
- Seunghoon Lee
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
| | - Yevhen Horbatenko
- Department of Chemistry, Kyungpook National University, Daegu 702-701, South Korea
| | - Michael Filatov
- Department of Chemistry, Kyungpook National University, Daegu 702-701, South Korea
| | - Cheol Ho Choi
- Department of Chemistry, Kyungpook National University, Daegu 702-701, South Korea
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40
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Lykhin AO, Truhlar DG, Gagliardi L. Role of Triplet States in the Photodynamics of Aniline. J Am Chem Soc 2021; 143:5878-5889. [PMID: 33843225 DOI: 10.1021/jacs.1c00989] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The dynamics of excited heteroaromatic molecules is a key to understanding the photoprotective properties of many biologically relevant chromophores that dissipate their excitation energy nonreactively and thereby prevent the detrimental effects of ultraviolet radiation. Despite their structural variability, most substituted aromatic compounds share a common feature of a repulsive 1πσ* potential energy surface. This surface can lead to photoproducts, and it can also facilitate the population transfer back to the ground electronic state by means of a 1πσ*/S0 conical intersection. Here, we explore a hidden relaxation route involving the triplet electronic state of aniline, which has recently been discovered by means of time-selected photofragment translational spectroscopy [J. Chem. Phys. 2019, 151, 141101]. By using the recently available analytical gradients for multiconfiguration pair-density functional theory, it is now possible to locate the minimum-energy crossing points between states of different spin and therefore compute the intersystem crossing rates with a multireference method, rather than with the less reliable single-reference methods. Using such calculations, we demonstrate that the population loss of aniline in the T1(3ππ*) state is dominated by C6H5NH2 → C6H5NH· + H· dissociation, and we explain the long nonradiative lifetimes of the T1(3ππ*) state at the excitation wavelengths of 294-264 nm.
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Affiliation(s)
- Aleksandr O Lykhin
- Department of Chemistry, Pritzker School of Molecular Engineering, The James Franck Institute and Chicago Center for Theoretical Chemistry, The University of Chicago, Chicago, Illinois 60637, United States
| | - Donald G Truhlar
- Department of Chemistry, Chemical Theory Center, and Minnesota Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455, United States
| | - Laura Gagliardi
- Department of Chemistry, Pritzker School of Molecular Engineering, The James Franck Institute and Chicago Center for Theoretical Chemistry, The University of Chicago, Chicago, Illinois 60637, United States
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41
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Filatov M, Lee S, Nakata H, Choi CH. Signatures of Conical Intersection Dynamics in the Time-Resolved Photoelectron Spectrum of Furan: Theoretical Modeling with an Ensemble Density Functional Theory Method. Int J Mol Sci 2021; 22:4276. [PMID: 33924097 PMCID: PMC8074317 DOI: 10.3390/ijms22084276] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2021] [Revised: 04/13/2021] [Accepted: 04/15/2021] [Indexed: 12/13/2022] Open
Abstract
The non-adiabatic dynamics of furan excited in the ππ* state (S2 in the Franck-Condon geometry) was studied using non-adiabatic molecular dynamics simulations in connection with an ensemble density functional method. The time-resolved photoelectron spectra were theoretically simulated in a wide range of electron binding energies that covered the valence as well as the core electrons. The dynamics of the decay (rise) of the photoelectron signal were compared with the excited-state population dynamics. It was observed that the photoelectron signal decay parameters at certain electron binding energies displayed a good correlation with the events occurring during the excited-state dynamics. Thus, the time profile of the photoelectron intensity of the K-shell electrons of oxygen (decay constant of 34 ± 3 fs) showed a reasonable correlation with the time of passage through conical intersections with the ground state (47 ± 2 fs). The ground-state recovery constant of the photoelectron signal (121 ± 30 fs) was in good agreement with the theoretically obtained excited-state lifetime (93 ± 9 fs), as well as with the experimentally estimated recovery time constant (ca. 110 fs). Hence, it is proposed to complement the traditional TRPES observations with the trXPS (or trNEXAFS) measurements to obtain more reliable estimates of the most mechanistically important events during the excited-state dynamics.
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Affiliation(s)
- Michael Filatov
- Department of Chemistry, Kyungpook National University, Daegu 702-701, Korea
| | - Seunghoon Lee
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA 91125, USA;
| | - Hiroya Nakata
- R & D Center Kagoshima, Kyocera, 1-4 Kokubu Yamashita-cho, Kirishima-shi, Kagoshima 899-4312, Japan;
| | - Cheol-Ho Choi
- Department of Chemistry, Kyungpook National University, Daegu 702-701, Korea
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42
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Heller ER, Joswig JO, Seifert G. Exploring the effects of quantum decoherence on the excited-state dynamics of molecular systems. Theor Chem Acc 2021. [DOI: 10.1007/s00214-021-02741-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Abstract
AbstractFewest-switches surface hopping (FSSH) is employed in order to investigate the nonadiabatic excited-state dynamics of thiophene and related compounds and hence to establish a connection between the electronic system, the critical points in configuration space and the deactivation dynamics. The potential-energy surfaces of the studied molecules were calculated with complete active space self-consistent field and time-dependent density-functional theory. They are analyzed thoroughly to locate and optimize minimum-energy conical intersections, which are essential to the dynamics of the system. The influence of decoherence on the dynamics is examined by employing different decoherence schemes. We find that irrespective of the employed decoherence algorithm, the population dynamics of thiophene give results which are sound with the expectations grounded on the analysis of the potential-energy surface. A more detailed look at single trajectories as well as on the excited-state lifetimes, however, reveals a substantial dependence on how decoherence is accounted for. In order to connect these findings, we describe how ensemble averaging cures some of the overcoherence problems of uncorrected FSSH. Eventually, we identify carbon–sulfur bond cleavage as a common feature accompanying electronic transitions between different states in the simulations of all thiophene-related compounds studied in this work, which is of interest due to their relevance in organic photovoltaics.
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Gulania S, Kjønstad EF, Stanton JF, Koch H, Krylov AI. Equation-of-motion coupled-cluster method with double electron-attaching operators: Theory, implementation, and benchmarks. J Chem Phys 2021; 154:114115. [PMID: 33752380 DOI: 10.1063/5.0041822] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We report a production-level implementation of the equation-of-motion (EOM) coupled-cluster (CC) method with double electron-attaching (DEA) EOM operators of 2p and 3p1h types, EOM-DEA-CCSD. This ansatz, suitable for treating electronic structure patterns that can be described as two-electrons-in-many orbitals, represents a useful addition to the EOM-CC family of methods. We analyze the performance of EOM-DEA-CCSD for energy differences and molecular properties. By considering reduced quantities, such as state and transition one-particle density matrices, we compare EOM-DEA-CCSD wave functions with wave functions computed by other EOM-CCSD methods. The benchmarks illustrate that EOM-DEA-CCSD is capable of treating diradicals, bond-breaking, and some types of conical intersections.
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Affiliation(s)
- Sahil Gulania
- Department of Chemistry, University of Southern California, Los Angeles, California 90089, USA
| | - Eirik F Kjønstad
- Department of Chemistry, Norwegian University of Science and Technology, 7491 Trondheim, Norway
| | - John F Stanton
- Quantum Theory Project, Departments of Chemistry and Physics, University of Florida, Gainesville, Florida 32611, USA
| | - Henrik Koch
- Scuola Normale Superiore, Piazza dei Cavaleri 7, 56126 Pisa, Italy
| | - Anna I Krylov
- Department of Chemistry, University of Southern California, Los Angeles, California 90089, USA
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44
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Liu F, Filatov M, Martínez TJ. Analytical derivatives of the individual state energies in ensemble density functional theory. II. Implementation on graphical processing units (GPUs). J Chem Phys 2021; 154:104108. [DOI: 10.1063/5.0041389] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023] Open
Affiliation(s)
- Fang Liu
- Department of Chemistry, Emory University, Atlanta, Georgia 30322, USA
| | - Michael Filatov
- Department of Chemistry, Kyungpook National University, Daegu 702-701, South Korea
| | - Todd J. Martínez
- Department of Chemistry and The PULSE Institute, Stanford University, Stanford, California 94305, USA
- SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
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45
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Baek YS, Lee S, Filatov M, Choi CH. Optimization of Three State Conical Intersections by Adaptive Penalty Function Algorithm in Connection with the Mixed-Reference Spin-Flip Time-Dependent Density Functional Theory Method (MRSF-TDDFT). J Phys Chem A 2021; 125:1994-2006. [PMID: 33651623 DOI: 10.1021/acs.jpca.0c11294] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A new adaptive algorithm for penalty function optimization for minimum-energy three-states conical intersections (ME3CI) is suggested. The new algorithm differs from the original penalty function algorithm by (a) removing the redundancy in the target function, (b) using an adaptive increment for the penalty function weighting factor, and (c) using tighter convergence criteria for the energy gap. The latter was introduced to guarantee convergence to a true conical intersection rather than to a narrowly avoided crossing geometry. The new algorithm was tested in the optimization of the ME3CI geometries in butadiene and malonaldehyde, where all of the previously found true ME3CI geometries were recovered. The previously found butadiene's CI3/2/1 turned out to be a narrowly avoided crossing. For butadiene, seven new ME3CI geometries have been located. Because of the removal of the redundancy and the use of the adaptive weighting factor, the convergence rate of the new algorithm is noticeably improved as compared to that of the previously proposed penalty function algorithm. The application to malonaldehyde and butadiene demonstrates that the three-state conical intersections may be more abundant and hence more involved in the photochemistry than previously thought. The recently developed mixed-reference spin flip (MRSF)-TDDFT method yields ME3CI geometries and relative energies quantitatively consistent with the previously reported calculations at a much reduced computational cost.
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Affiliation(s)
- Yong Su Baek
- Department of Chemistry, Kyungpook National University, Daegu 702-701, South Korea
| | - Seunghoon Lee
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
| | - Michael Filatov
- Department of Chemistry, Kyungpook National University, Daegu 702-701, South Korea
| | - Cheol Ho Choi
- Department of Chemistry, Kyungpook National University, Daegu 702-701, South Korea
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Giuliani G, Melaccio F, Gozem S, Cappelli A, Olivucci M. QM/MM Investigation of the Spectroscopic Properties of the Fluorophore of Bacterial Luciferase. J Chem Theory Comput 2021; 17:605-613. [PMID: 33449693 PMCID: PMC9220819 DOI: 10.1021/acs.jctc.0c01078] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We employ replica-exchange molecular dynamics (REMD) and a hybrid ab initio multiconfigurational quantum mechanics/molecular mechanics (QM/MM) approach to model the absorption and fluorescence properties of bacterial luciferin-luciferase. Specifically, we employ complete active space perturbation theory (CASPT2) and study the effect of active space, basis set, and IPEA shift on the computed energies. We discuss the effect of the protein environment on the fluorophore's excited-state potential energy surface and the role that the protein plays in enhancing the fluorescence quantum yield in bacterial bioluminescence.
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Affiliation(s)
- Germano Giuliani
- Department of Biotechnology, Chemistry and Pharmacy, University of Siena, Via A. Moro 2, 53100 Siena, Italy
| | - Federico Melaccio
- Department of Biotechnology, Chemistry and Pharmacy, University of Siena, Via A. Moro 2, 53100 Siena, Italy
| | - Samer Gozem
- Department of Chemistry, Georgia State University, Atlanta, Georgia 30302, United States
| | - Andrea Cappelli
- Department of Biotechnology, Chemistry and Pharmacy, University of Siena, Via A. Moro 2, 53100 Siena, Italy
| | - Massimo Olivucci
- Department of Biotechnology, Chemistry and Pharmacy, University of Siena, Via A. Moro 2, 53100 Siena, Italy
- Department of Chemistry, Bowling Green State University, Bowing Green, Ohio 43403, United States
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Abstract
Herewith, we propose two new exponents for the recently introduced XDW-CASPT2 method [S. Battaglia and R. Lindh, J. Chem. Theory Comput. 16, 1555-1567 (2020)], which fix one of the largest issues hindering this approach. By using the first-order effective Hamiltonian coupling elements, the weighting scheme implicitly takes into account the symmetry of the states, thereby averaging Fock operators only if the zeroth-order wave functions interact with each other. The use of Hamiltonian couplings also provides a physically sounder approach to quantitate the relative weights; however, it introduces new difficulties when these rapidly die off to zero. The improved XDW-CASPT2 method is critically tested on several systems of photochemical relevance, and it is shown that it succeeds in its original intent of maintaining MS-CASPT2 accuracy for the evaluation of transition energies and at the same time providing smooth potential energy surfaces around near-degenerate points akin to XMS-CASPT2.
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Affiliation(s)
- Stefano Battaglia
- Department of Chemistry-BMC, Uppsala University, P.O. Box 576, SE-75123 Uppsala, Sweden
| | - Roland Lindh
- Department of Chemistry-BMC, Uppsala University, P.O. Box 576, SE-75123 Uppsala, Sweden
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Ha JK, Kim K, Min SK. Machine Learning-Assisted Excited State Molecular Dynamics with the State-Interaction State-Averaged Spin-Restricted Ensemble-Referenced Kohn-Sham Approach. J Chem Theory Comput 2021; 17:694-702. [PMID: 33470100 DOI: 10.1021/acs.jctc.0c01261] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
We present a machine learning-assisted excited state molecular dynamics (ML-ESMD) based on the ensemble density functional theory framework. Since we represent a diabatic Hamiltonian in terms of generalized valence bond ansatz within the state-interaction state-averaged spin-restricted ensemble-referenced Kohn-Sham (SI-SA-REKS) method, we can avoid singularities near conical intersections, which are crucial in excited state molecular dynamics simulations. We train the diabatic Hamiltonian elements and their analytical gradients with the SchNet architecture to construct machine learning models, while the phase freedom of off-diagonal elements of the Hamiltonian is cured by introducing the phase-less loss function. Our machine learning models show reasonable accuracy with mean absolute errors of ∼0.1 kcal/mol and ∼0.5 kcal/mol/Å for the diabatic Hamiltonian elements and their gradients, respectively, for penta-2,4-dieniminium cation. Moreover, by exploiting the diabatic representation, our models can predict correct conical intersection structures and their topologies. In addition, our ML-ESMD simulations give almost identical result with a direct dynamics at the same level of theory.
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Affiliation(s)
- Jong-Kwon Ha
- Department of Chemistry, School of Natural Science, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Ulju-gun, Ulsan 44919, South Korea
| | - Kicheol Kim
- Department of Chemistry, School of Natural Science, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Ulju-gun, Ulsan 44919, South Korea
| | - Seung Kyu Min
- Department of Chemistry, School of Natural Science, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Ulju-gun, Ulsan 44919, South Korea
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Kretz B, Egger DA. Accurate Molecular Geometries in Complex Excited-State Potential Energy Surfaces from Time-Dependent Density Functional Theory. J Chem Theory Comput 2021; 17:357-366. [PMID: 33284603 DOI: 10.1021/acs.jctc.0c00858] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
The interplay of electronic excitations and structural changes in molecules impacts nonradiative decay and charge transfer in the excited state, thus influencing excited-state lifetimes and photocatalytic reaction rates in optoelectronic and energy devices. To capture such effects requires computational methods providing an accurate description of excited-state potential energy surfaces and geometries. We suggest time-dependent density functional theory using optimally tuned range-separated hybrid (OT-RSH) functionals as an accurate approach to obtain excited-state molecular geometries. We show that OT-RSH provides accurate molecular geometries in excited-state potential energy surfaces that are complex and involve an interplay of local and charge-transfer excitations, for which conventional semilocal and hybrid functionals fail. At the same time, the nonempirical OT-RSH approach maintains the high accuracy of parametrized functionals (e.g., B3LYP) for predicting excited-state geometries of small organic molecules showing valence excited states.
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Affiliation(s)
- Bernhard Kretz
- Department of Physics, Technical University of Munich, James-Franck-Str. 1, 85748 Garching, Germany
| | - David A Egger
- Department of Physics, Technical University of Munich, James-Franck-Str. 1, 85748 Garching, Germany
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Khrenova MG, Mulashkin FD, Bulavko ES, Zakharova TM, Nemukhin AV. Dipole Moment Variation Clears Up Electronic Excitations in the π-Stacked Complexes of Fluorescent Protein Chromophores. J Chem Inf Model 2020; 60:6288-6297. [PMID: 33206518 DOI: 10.1021/acs.jcim.0c01028] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We propose a quantitative structure-property relationship (QSPR) model for prediction of spectral tuning in cyan, green, orange, and red fluorescent proteins, which are engineered by motifs of the green fluorescent protein. Protein variants, in which their chromophores are involved in the π-stacking interaction with amino acid residues tyrosine, phenylalanine, and histidine, are prospective markers useful in bioimaging and super-resolution microscopy. In this work, we constructed training sets of the π-stacked complexes of four fluorescent protein chromophores (of the green, orange, red, and cyan series) with various substituted benzenes and imidazoles and tested the use of dipole moment variation upon excitation (DMV) as a descriptor to evaluate the vertical excitation energies in these systems. To validate this approach, we computed and analyzed electron density distributions of the π-stacked complexes and correlated the QSPR predictions with the reference values of the transition energies obtained using the high-level ab initio quantum chemistry methods. According to our results, the use of the DMV descriptor allows one to predict excitation energies in the π-stacked complexes with errors not exceeding 0.1 eV, which makes this model a practically useful tool in the development of efficient fluorescent markers for in vivo imaging.
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Affiliation(s)
- Maria G Khrenova
- Department of Chemistry, Lomonosov Moscow State University, Moscow 119991, Russian Federation.,Bach Institute of Biochemistry, Federal Research Centre "Fundamentals of Biotechnology" of the Russian Academy of Sciences, Moscow 119071, Russian Federation
| | - Fedor D Mulashkin
- Department of Chemistry, Lomonosov Moscow State University, Moscow 119991, Russian Federation
| | - Egor S Bulavko
- Department of Biology, Lomonosov Moscow State University, Moscow 119991, Russian Federation
| | - Tatiana M Zakharova
- Department of Chemistry, Lomonosov Moscow State University, Moscow 119991, Russian Federation
| | - Alexander V Nemukhin
- Department of Chemistry, Lomonosov Moscow State University, Moscow 119991, Russian Federation.,Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, Moscow 119334, Russian Federation
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