Phylogenetic diversity and metabolic potential of activated sludge microbial communities in full-scale wastewater treatment plants

Nature-based solutions for antibiotics and antimicrobial resistance removal in tertiary wastewater treatment: Microbiological composition and risk assessment

This field-scale study evaluates the seasonal effectiveness of employing nature-based solutions (NBSs), particularly surface flow and horizontal subsurface flow constructed wetland configurations, as tertiary treatment technologies for the removal of antibiotics (ABs) and antibiotic resistance genes (ARGs) compared to a conventional treatment involving UV and chlorination. Out of the 21 monitored ABs, 13 were detected in the influent of three tertiary wastewater treatments, with concentrations ranging from 2 to 1218 ng·L-1. The ARGs sul1 and dfrA1 exhibited concentrations ranging from 1 × 105 to 9 × 106 copies/100 mL. NBSs were better at reducing ABs (average 69 to 88 %) and ARGs (2-3 log units) compared to the conventional tertiary system (average 36 to 39 % and no removal to 2 log units) in both seasons. Taxonomic compositions in influent water samples shifted from wastewater-impacted communities (Actinomycetota and Firmicutes) to a combination of plant rhizosphere-associated and river communities in NBS effluents (Alphaproteobacteria). In contrast, the conventional technology showed no substantial differences in community composition. Moreover, NBSs substantially reduced the ecotoxicological risk assessment (cumulative RQs). Furthermore, NBSs reduced the ecotoxicological risk (cumulative RQs) by an average of over 70 % across seasons, whereas the benchmark technology only achieved a 6 % reduction. In conclusion, NBSs present a robust alternative for minimizing the discharge of ABs and ARGs into surface water bodies.

Non-redundant metagenome-assembled genomes of activated sludge reactors at different disturbances and scales

Metagenome-assembled genomes (MAGs) are microbial genomes reconstructed from metagenomic data and can be assigned to known taxa or lead to uncovering novel ones. MAGs can provide insights into how microbes interact with the environment. Here, we performed genome-resolved metagenomics on sequencing data from four studies using sequencing batch reactors at microcosm (~25 mL) and mesocosm (~4 L) scales inoculated with sludge from full-scale wastewater treatment plants. These studies investigated how microbial communities in such plants respond to two environmental disturbances: the presence of toxic 3-chloroaniline and changes in organic loading rate. We report 839 non-redundant MAGs with at least 50% completeness and 10% contamination (MIMAG medium-quality criteria). From these, 399 are of putative high-quality, while sixty-seven meet the MIMAG high-quality criteria. MAGs in this catalogue represent the microbial communities in sixty-eight laboratory-scale reactors used for the disturbance experiments, and in the full-scale wastewater treatment plant which provided the source sludge. This dataset can aid meta-studies aimed at understanding the responses of microbial communities to disturbances, particularly as ecosystems confront rapid environmental changes.

Evaluating the low-rank coal degradation efficiency bioaugmented with activated sludge

Microbial bioaugmentation of coal is considered as a viable and ecologically sustainable approach for the utilization of low-rank coals (LRC). The search for novel techniques to derive high-value products from LRC is currently of great importance. In response to this demand, endeavors have been undertaken to develop microbially based coal solubilization and degradation techniques. The impact of supplementing activated sludge (AS) as a microbial augmentation to enhance LRC biodegradation was investigated in this study. The LRC and their biodegradation products were characterized using the following methods: excitation-emission Matrices detected fluorophores at specific wavelength positions (O, E, and K peaks), revealing the presence of organic complexes with humic properties. FTIR indicated the increased amount of carboxyl groups in the bioaugmented coals, likely due to aerobic oxidation of peripheral non-aromatic structural components of coal. The bacterial communities of LRC samples are primarily composed of Actinobacteria (up to 36.2%) and Proteobacteria (up to 25.8%), whereas the Firmicutes (63.04%) was the most abundant phylum for AS. The community-level physiological profile analysis showed that the microbial community AS had high metabolic activity of compared to those of coal. Overall, the results demonstrated successful stimulation of LRC transformation through supplementation of exogenous microflora in the form of AS.

16S rRNA gene amplicon sequencing data from an Australian wastewater treatment plant

Amplicon sequencing data of the 16S rRNA (V1-V3) gene from 56 effluent and sediment samples from an Australian wastewater treatment plant are reported. Proteobacteria (3.50%-90.09%), Actinobacteria (0.02%-45.71%), and Cyanobacteria (0.05%-63.73%) were dominant in the effluent. The sediment samples were dominated by Proteobacteria (13.14%-84.83%), Chloroflexi (0.84%-42.52%), and Firmicutes (1.54%-17.21%).

Feammox bacterial biofilm formation in HFMB

Nitrogen pollution has been increasing with the development of industrialization. Consequently, the excessive deposition of reactive nitrogen in the environment has generated the loss of biodiversity and eutrophication of different ecosystems. In 2005, a Feammox process was discovered that anaerobically metabolizes ammonium. Feammox with the use of hollow fiber membrane bioreactors (HFMB), based on the formation of biofilms of bacterial communities, has emerged as a possible efficient and sustainable method for ammonium removal in environments with high iron concentrations. This work sought to study the possibility of implementing, at laboratory scale, an efficient method by evaluating the use of HFMB. Samples from an internal circulation reactor (IC) incubated in culture media for Feammox bacteria. The cultures were enriched in a batch reactor to evaluate growth conditions. Next, HFMB assembly was performed, and Feammox parameters were monitored. Also, conventional PCR and scanning electron microscopy (SEM) analysis were performed to characterize the bacterial communities associated with biofilm formation. The use of sodium acetate presented the best performance for Feammox activity. The HFMB operation showed an ammonium (NH4+) removal of 50%. SEM analysis of the fibers illustrated the formation of biofilm networks formed by bacteria, which were identified as Albidiferax ferrireducens, Geobacter spp, Ferrovum myxofaciens, Shewanella spp., and Anammox. Functional genes Archaea/Bacteria ammonia monooxygenase, nrxA, hzsB, nirS and nosZ were also identified. The implementation of HFMB Feammox could be used as a sustainable tool for the removal of ammonium from wastewater produced because of anthropogenic activities.

Metagenomic insights into isolable bacterial communities and antimicrobial resistance in airborne dust from pig farms

This study aims to investigate bacterial communities and antimicrobial resistance (AMR) in airborne dust from pig farms. Airborne dust, pig feces and feed were collected from nine pig farms in Thailand. Airborne dust samples were collected from upwind and downwind (25 meters from pig house), and inside (in the middle of the pig house) of the selected pig house. Pig feces and feed samples were individually collected from the pen floor and feed trough from the same pig house where airborne dust was collected. A direct total bacteria count on each sampling plate was conducted and averaged. The ESKAPE pathogens together with Escherichia coli, Salmonella, and Streptococcus were examined. A total of 163 bacterial isolates were collected and tested for MICs. Pooled bacteria from the inside airborne dust samples were analyzed using Metagenomic Sequencing. The highest bacterial concentration (1.9-11.2 × 103 CFU/m3) was found inside pig houses. Staphylococcus (n = 37) and Enterococcus (n = 36) were most frequent bacterial species. Salmonella (n = 3) were exclusively isolated from feed and feces. Target bacteria showed a variety of resistance phenotypes, and the same bacterial species with the same resistance phenotype were found in airborne dust, feed and fecal from each farm. Metagenomic Sequencing analysis revealed 1,652 bacterial species across all pig farms, of which the predominant bacterial phylum was Bacillota. One hundred fifty-nine AMR genes of 12 different antibiotic classes were identified, with aminoglycoside resistance genes (24%) being the most prevalent. A total of 251 different plasmids were discovered, and the same plasmid was detected in multiple farms. In conclusion, the phenotypic and metagenomic results demonstrated that airborne dust from pig farms contained a diverse array of bacterial species and genes encoding resistance to a range of clinically important antimicrobial agents, indicating the significant role in the spread of AMR bacterial pathogens with potential hazards to human health. Policy measurements to address AMR in airborne dust from livestock farms are mandatory.

Enhanced treatment of sludge drying condensate by A/O-MBR process: Microbial activity and community structure

With the rapid increase of sludge production from sewage treatment plants, the treatment of sludge drying condensate rich in a large amount of pollutants urgently needs to be addressed. Due to the unique characteristics of sludge drying condensate (high ammonia nitrogen and COD concentration), there are almost no reports on biological treatment methods specifically targeting sludge drying condensate. In this study, A/O-MBR process was proposed for sludge drying condensate treatment and the effects of ammonia nitrogen loads, alkalinity and aeration intensity were explored. Experimental results show that under the ammonia nitrogen load of 0.35 kg NH4+-N/(m3·d) and the aeration intensity of 0.5 m3/(m2·min), the removal rate of COD and NH4+-N could reach 94% and 99.86% with the addition of alkalinity (m(NaHCO3): m(NH4+-N) = 7:1), respectively. The distribution of living and dead microbial cells in the activated sludge of three reactors also proved that the supplement of alkalinity in the influent can ensure the feasible living conditions for microorganisms. In addition to traditional nitrifying bacteria, through the supplementation of alkalinity and the reduction of aeration intensity, the system had also domesticated high abundance heterogeneous nitrification aerobic denitrification (HN-AD) and aerobic denitrification bacteria (both more than 10% of the total bacterial count). The denitrification process of sludge drying condensate was simplified and the denitrification efficiency was greatly improved. The findings of this study could provide important theoretical guidance for the biological treatment process of sludge drying condensate.

Sub-micron microplastics affect nitrogen cycling by altering microbial abundance and activities in a soil-legume system

Recently, the environmental and agricultural impact of plastic waste has attracted considerable attention. Here, we investigated the impact of sub-micron polyethylene (PE) and polypropylene (PP) microplastics (MPs) on nitrogen cycling, with emphasis on bacterial abundance and diversity in a soil-soybean (Glycine max) system. Exposure to soil containing MPs (50 and 500 mg kg-1) did not affect soybean growth, but significantly increased plant nitrogen uptake, which was confirmed by increased activities of nitrogenase in the soil and glutamine synthetase in soybean root. Additionally, there was an increase in 16S gene copy number and carbon and nitrogen substrate utilization, indicating increased abundance and activity of rhizosphere microbial communities. Moreover, MP contamination affected the taxonomic profile of rhizosphere bacteria, especially the abundance of symbiotic and free-living bacteria involved in nitrogen cycling. Furthermore, qPCR analysis of nitrogen-related genes and Kyoto Encyclopedia of Genes and Genomes analysis of 16S rRNA gene sequencing data revealed an increased abundance of functional genes associated with nitrogen fixation and nitrification. However, the concentration and polymer type of MPs did not have a significant impact in our system. Overall, these results provide insights into the interactions between MPs and rhizosphere bacterial communities in the soil-legume system.

Initial type and abundance of cyanobacteria determine morphotype development of phototrophic ecosystems

Phototrophic aggregates containing filamentous cyanobacteria occur naturally, for example, as cryoconite on glaciers and microbialites in fresh or marine waters, but their formation is not fully understood. Laboratory models are now available to reproduce aggregation, that is, the formation of different morphotypes like hemispheroids, microbial mats or sphere-like aggregates we call photogranules. In the model, activated sludge as starting matrix is transformed into aggregates enclosed by a phototrophic layer of growing cyanobacteria. These cyanobacteria were either enriched from the matrix or we added them intentionally. We hypothesize that the resulting morphotype depends on the type and concentration of the added cyanobacteria. When cyanobacteria from mature photogranules were added to activated sludge, photogranulation was not observed, but microbial mats were formed. Photogranulation of sludge could be promoted when adding sufficient quantities of cyanobacterial strains that form clumps when grown as isolates. The cyanobacteria putatively responsible for photogranulation were undetectable or only present in low abundance in the final communities of photogranules, which were always dominated by mat-forming cyanobacteria. We suggest that, in a temporal succession, the ecosystem engineer initiating photogranulation eventually disappears, leaving behind its structural legacy. We conclude that understanding phototrophic aggregate formation requires considering the initial succession stages of the ecosystem development.

Fermentation broth of food waste: A sustainable electron donor for perchlorate biodegradation

Microbial reduction has been considered an effective way to remove perchlorate (ClO₄^-), during which, additional electron donors and carbon sources are required. This work aims to study the potential of fermentation broth of food waste (FBFW) serving as an electron donor for ClO₄^- biodegradation, and further investigates the variance of the microbial community. The results showed that FBFW without anaerobic inoculum at 96 h (F-96) exhibited the highest ClO₄^- removal rate of 127.09 mg/L/d, attributed to higher acetate and lower ammonium contents in the F-96 system. In a 5 L continuous stirred-tank reactor (CSTR), with a 217.39 g/m³·d ClO₄^- loading rate, 100% removal efficiency of ClO₄^- was achieved, indicating that the application of FBFW in the CSTR showed satisfactory performance for ClO₄^- degradation. Moreover, the microbial community analysis revealed that Proteobacteria and Dechloromonas contributed positively to ClO₄^- degradation. Therefore, this study provided a novel approach for the recovery and utilization of food waste, by employing it as a cost-effective electron donor for ClO₄^- biodegradation.

Metagenomic analysis of ready biodegradability tests to ascertain the relationship between microbiota and the biodegradability of test chemicals

Ready biodegradability tests conducted in accordance with the Organisation for Economic Co-operation and Development guidelines (test 301C or test 301F) are performed using activated sludge (AS) prepared by the Chemicals Evaluation and Research Institute (AS-CERI) or that taken from a sewage treatment plant (AS-STP). It had been reported that AS-CERI had lower activity than AS-STP in biodegrading test chemicals, and that biodegradation was accelerated by increasing the volume of the test medium. However, these phenomena have not been clarified from the perspective of the microbiota. In this study, using metagenomic analysis, we first showed that the microbiota of AS-CERI was biased in its distribution of phyla, less diverse, and had greater lot-to-lot variability than that of AS-STP. Second, after cultivation for a long period of time, the microbiota of AS-STP and AS-CERI became more similar to each other in terms of community structure. Third, determining degraders of test substances when each substance was actively biodegraded was found to be an effective approach. Finally, we clarified experimentally that a large volume of test medium increased the number of species that could degrade test substances in the condition where the initial concentrations of each substance and AS-STP were kept constant.

Screening potential polyhydroxyalkanoate-producing bacteria from wastewater sludge

We applied fluorescence staining of Nile red, polymerase chain reaction (PCR), and carbon substrate utilization and pressure tolerance analysis to execute three-stage screening for potential polyhydroxyalkanoate (PHA) producers in the sludge samples of 21 large-scale wastewater treatment plants of city and industrial parks in Taiwan area. Total 35,429 colonies were grown on 196 plates, the screened 30 strains were subjected to 16S rRNA analysis, and 18 identified genera belonged to Proteobacteria (67%), Firmicutes (17%), and Actinomycetota (16%). The PHA accumulation results revealed that nine genera (50% of 18 screened) produced PHAs by limiting the nitrogen source and excess single carbon sources of glucose in an aerobic status. The PHA accumulation percentage was 1.44-58.77% at dry cell weight, and the theoretical yield from glucose was 0.52-58.76%. Our results indicate that our triple-screening method is promising for identifying a high biodiversity of PHA-accumulating bacteria from activated sludge for future industrial applications.

A rational strategy of combining Fenton oxidation and biological processes for efficient nitrogen removal in toxic coking wastewater

Effective removal of nitrogen from coking wastewaters is a great challenge, since conventional biological technologies commonly suffer from concentrated bio-toxic components such as phenolic compounds and thiocyanide (SCN^-). This study has successfully developed a novel ternary process for efficiently removing nitrogen from a practical coking wastewater, by rationally combined biological pretreatment, Fenton sub-pretreatment and final partial nitrification-denitrification (PN) process. It was noted that the oxic biological pretreatment (OP) could degrade above 80 % of COD and SCN^- in the wastewater, by adopting the pristine coking wastewater sludge. Fenton sub-pretreatment would further degrade the residual toxic organics and protect the metabolic activity of nitrobacteria and denitrobacteria, realizing the efficient removal of NH₄⁺-N and TN that occurred in the final PN process with self-cultivated sludge. This work can provide an interesting strategy by rationally combining biological-physicochemical processes for nitrogen removal in toxic industrial wastewaters.

The Performance and Mechanism of Sludge Reduction by the Bioaugmentation Approach

Simple Summary

Activated sludge-based wastewater treatment process is one of the most popular adopted systems in wastewater treatment plants around the world. Excess sludge is an inevitable byproduct of the process, and the enormous quantity has brought a significant burden on operational costs. Various physicochemical and biological methods have been developed. Biological-based methods are promising because of less chemical consumption and low operation cost comparing to physicochemical methods. Hence, the present study is aimed at searching for functional bacteria that could reduce sludge, enhance the performance of sludge reduction through optimization, and try to unveil the underlying mechanism during sludge reduction. A total of 19 strains that belong to Firmicutes, Proteobacteria, and Actinobacteria were successfully isolated and identified. Subsequently, the performance of sludge reduction by pure culture or mix-cultures was validated. In total, 21.2% and 13.9% of total suspended and volatile suspended solids were reduced within 48 h after optimization via response surface methodology. The three-dimensional excitation-emission matrix fluorescence spectrum and hydrolases test results revealed that the sludge reduction might be promoted by the strain mainly through hydrolysis via proteinase and amylase. The results obtained from the study could help us to find an effective and economical way to resolve the sludge issue.

Abstract

Millions of wastewater treatment plants (WWTPs) based on the activated sludge process have been established worldwide to help to purify wastewater. However, a vast amount of sludge is inevitably generated, and the cost of sludge disposal could reach over half of the total operation cost of a WWTP. Various sludge reduction techniques have been developed, including physicochemical, biological, and combinational methods. Micro-organisms that could reduce sludge by cryptic growth are vital to the biological approach. Currently, only limited functional bacteria have been isolated, and the lack of knowledge on the underlying mechanism hinders the technique development. Therefore, the present study is aimed at isolating sludge-reducing bacteria and optimizing the sludge reduction process through response surface methodology. Nineteen strains were obtained from sludge. The mix-cultures did not show a higher sludge reduction rate than the pure culture, which may be ascribed to the complicated interactions, such as competition and antagonistic effects. In total, 21.2% and 13.9% of total suspended and volatile suspended solids were reduced within 48 h after optimization. The three-dimensional excitation-emission matrix fluorescence spectrum and hydrolases test results revealed that the sludge reduction might be promoted by the strain mainly through hydrolysis via proteinase and amylase. The results obtained from the study demonstrate the potential of using micro-organisms for sludge reduction through cryptic growth.

Effect of aerobic microbes' competition for oxygen on nitrogen removal in mainstream nitritation-anammox systems

The effects of C/N ratio in mainstream partial nitritation (PN)-anaerobic ammonia oxidation (ANAMMOX) considering competitive relationship of aerobic microbes competing for oxygen were investigated. Thy system was operated for 501 d with various C/N ratio. Competitive growth of aerobic heterotrophic bacteria (AHB) at ≥ 1 of C/N ratio acted effectively on the selective inhibition of nitrite-oxidizing bacteria (NOB) while contributing to stable PN-A. In-depth kinetic analysis indicated oxygen affinity of aerobic microbes was in the order of AHB > ammonia-oxidizing bacteria (AOB) > NOB. In addition, potential of denitritation by AHB could contributed to improving nitrogen removal up to 87.5 ± 4.3%. AHB was comparatively clustered into two groups with a C/N ratio of 1. Nitrosomonas sp. PY1 became predominant while Nitrospira spp. were the major NOB. The potential of AHB in establishing selective inhibition of NOB was identified, which could be a novel approach to stabilze the mainstream PN-A.

A relationship between phages and organic carbon in wastewater treatment plant effluents

With stringent effluent requirements and the implementation of new processes for micropollutant removal, it is increasingly important for wastewater treatment plants (WWTPs) to understand the factors affecting effluent quality. Phages (viruses infecting prokaryotes) are abundant in the biological treatment processes. They can contribute to organic carbon in the treated effluent both because they are organic in nature and occur in the effluent and because they cause lysis of microorganisms. Today very little is known about the effects of phages on effluent quality. The goal of this study was, therefore, to determine the relationship between phages and organic carbon in WWTP effluents. We also examined the diversity, taxonomy, and host-association of DNA phages using metagenomics. Effluent samples were collected from four WWTPs treating municipal wastewater. Significant differences in both organic carbon and virus-like particle concentrations were observed between the plants and there was a linear relationship between the two parameters. The phage communities were diverse with many members being taxonomically unclassified. Putative hosts were dominated by bacteria known to be abundant in activated sludge systems such as Comamonadaceae. The composition of phages differed between the WWTPs, suggesting that local conditions shape the communities. Overall, our findings suggest that the abundance and composition of phages are related to effluent quality. Thus, there is a need for further research clarifying the association between phage dynamics and WWTP function.

A pilot-scale study of the integrated floc-ultrafiltration membrane-based drinking water treatment process

Although applications of the integrated ultrafiltration (UF) membrane have been investigated for years, most studies have been conducted at the lab scale. Here, a case study on the integrated Fe-based floc-UF process was presented. To enhance membrane performance, both pre-filtration (bag filter) and pre-oxidation were used as pretreatments to remove particles and inhibit the development of microorganisms. Results showed that the integrated process operated stably with pre-treatments, and the UF membrane fouling behavior could be divided into three different phases: slow increase rate (phase I), medium increase rate (phase II), and fast increase rate (phase III). In comparison to those in phases II and III, both natural organic matters and colloids were the main membrane fouling mechanisms during phase I, as the pollutants were not successfully removed by flocs initially. With the continuous injection of flocs, a loose cake layer became the main fouling mechanism during phase II, resulting in the deterioration of membrane fouling. During phase III, however, microorganisms (e.g., Proteobacteria) were inevitably nourished within the cake layer and played an important role in aggravating the degree of membrane fouling. During this integrated membrane-based process, several operating factors, including floc concentration, sludge discharge frequency, and the aeration rate during backwashing, played important roles in determining membrane performance. In addition, except for oxygen consumption, all the effluent quality parameters met the drinking water criteria followed in China (GB5749-2006).

C058 and Other Functional Microorganisms Promote the Synthesis of Extracellular Polymer Substances in Mycelium Biofloc

The mycelium biofloc bioaugmented by Cordyceps strain C058 effectively purifies water, which may be related to the synthesis of extracellular polymer substances. To verify this conjecture, we analyzed the changes in extracellular polymer substances content in the mycelium biofloc under various hydraulic retention times (36 h, 18 h, and 11 h). The microstructure and microflora composition were analyzed using a scanning electron microscope and high-throughput sequencing. The ordinary biofloc without bioaugmentation was taken as a control. The results showed that under the above hydraulic retention time, the extracellular polymer substances contents of the mycelium biofloc were 51.20, 55.89, and 33.84 mg/g, respectively, higher than that of the ordinary biofloc (14.58, 15.72, and 18.19 mg/g). The protein content or the polysaccharide content also followed the same trend. Meanwhile, the sedimentation performance of the mycelium biofloc was better than that of the ordinary biofloc, attributed to the content of the extracellular polymer substances. It is worth noting that C058 is the main biofloc content, which promotes the synthesis of extracellular polymer substances in the mycelium biofloc. Other functional microorganisms in the mycelium biofloc were Janthinobacterium, Phormidium, Leptolyngbya, Hymenobacter, and Spirotrichea, which also promote the synthesis of extracellular polymer substances.

A bioreactor and nutrient balancing approach for the conversion of solid organic fertilizers to liquid nitrate-rich fertilizers: Mineralization and nitrification performance complemented with economic aspects

Due to the high water- and nutrient-use efficiency, hydroponic cultivation is increasingly vital in progressing to environment-friendly food production. To further alleviate the environmental impacts of synthetic fertilizer production, the use of recovered nutrients should be encouraged in horticulture and agriculture at large. Solid organic fertilizers can largely contribute to this, yet their physical and chemical nature impedes application in hydroponics. This study proposes a bioreactor for mineralization and nitrification followed by a supplementation step for limiting macronutrients to produce nitrate-based solutions from solid fertilizers, here based on a novel microbial fertilizer. Batch tests showed that aerobic conversions at 35 °C could realize a nitrate (NO₃^--N) production efficiency above 90% and a maximum rate of 59 mg N L^-1 d^-1. In the subsequent bioreactor test, nitrate production efficiencies were lower (44-51%), yet rates were higher (175-212 mg N L^-1 d^-1). Calcium and magnesium hydroxide were compared to control the bioreactor pH at 6.0 ± 0.2, while also providing macronutrients for plant production. A mass balance estimation to mimic the Hoagland nutrient solution showed that 92.7% of the NO₃^--N in the Ca(OH)₂ scenario could be organically sourced, while this was only 37.4% in the Mg(OH)₂ scenario. Besides, carbon dioxide (CO₂) generated in the bioreactor can be used for greenhouse carbon fertilization to save operational expenditure (OPEX). An estimation of the total OPEX showed that the production of a nutrient solution from solid organic fertilizers can be cost competitive compared to using commercially available liquid inorganic fertilizer solutions.

Adaptability of enhanced bioretention cell for nitrogen and phosphorus removal under two antibiotics stress

The overuse of antibiotics in the medical and aquaculture industries has led to the frequent detection of antibiotics in wastewater. Considering antibiotics would have an unknown impact on wastewater treatment in the future, the long-term effects of sulfamethoxazole (SMX) and tetracycline (TC) stress on the performance, functional genes and microbial community in three bioretention cells were investigated. The results showed that during the experiment, 0.8-1.2 mg/L of SMX would not destroy the water treatment capacity of the bioretention cells, and had a promoting effect on total nitrogen and ammonia nitrogen. 1.6 mg/L of SMX would cause the reduction of nitrogen removal efficiency and the phenomenon of phosphorus release, but it could be restored after a period of operation. TC of 0.8-1.2 mg/L did not have a significant impact on the removal of nutrients in AC-BRC (activated carbon-bioretention cell) and ACI-BRC (activated carbon and iron-bioretention cell), but TC of 1.2 mg/L caused the phenomenon of phosphorus release in BRC and the decrease of total nitrogen removal rate, 1.6 mg/L TC could make the bioretention cell lose its water treatment capacity. qPCR analysis of denitrification genes showed that the abundance of nirS, nirK, nosZ, and hzo had varying degrees of decrease before and after antibiotic stress, which meant the two antibiotics significantly inhibited the reduction of nitrite and nitrous oxide. But for the total number of bacteria, the relative abundance of the four genes has increased. The results of microbial community analysis also found that Proteobacteria, Bacteroidetes, Chloroflexi, and BIrii41, Denitratisoma, Ferritrophicum, Thiobacillus occupied the dominant species at the phylum level and the genus level respectively, which included most of the denitrifying bacteria. During the experiment, the nitrogen and phosphorus removal efficiency of AC-BRC and ACI-BRC were enhanced obviously, but ammonia nitrogen accumulated in ACI-BRC in the early stage of the reaction.

Combination of biodegradation and fenton process for efficient removal of PDM/ZnO

In the present study, an investigation was conducted on the removal of polydiallyldimethylammonium chloride-acrylic-acrylamide-hydroxyethyl acrylate/ZnO nanocomposites (PDM/ZnO) through biodegradation and Fenton process coupled treatments. As revealed from the results of the chemical oxygen demand, the total organic carbon, the biochemical oxygen demand and the CO₂ production analysis, PDM/ZnO could be partially biodegraded. The optimal initial pH, the mixed liquid suspended solids concentration and additional carbon source (glucose) dosage in the biodegradation were 7.0, 4.0 g/L and 1.0 g/L, respectively. On the whole, NaCl, the coexisted metal cations (Cu²⁺, Zn²⁺ and Cr³⁺) and additional NH₄Cl inhibited the biodegradation of PDM/ZnO. PDM/ZnO was suggested to adversely affect on microbial community structure and activity. Optimum conditions for Fenton treatment were 50 mg/L Fe²⁺, 20 mL/L H₂O₂ and pH 2.0. Biodegradation showed that 64% of PDM/ZnO was removed. Besides, the combination of Fenton post-treatment could achieve an over 97% removal of PDM/ZnO. Thus, Fenton process combined biodegradation pre-treatment can act as an effective method to remove PDM/ZnO.

Sugar profile regulates the microbial metabolic diversity in Chinese Baijiu fermentation

Cereals are widely used as raw material for food fermentation, and they can provide a variety of sugars in the fermentation via saccharification. However, the effect of sugar profile on microbial metabolism in spontaneous food fermentation is still unclear. Here, this work studied the regulation of sugar profile on the diversity of microbiota and their metabolism in Chinese Baijiu fermentation using sorghum as raw material. Six sugars were detected during Baijiu fermentation with 6 different cultivars of sorghum. The diversity of microbiota (ANOSIM: bacteria: P = 0.001, R = 0.77; fungi: P = 0.009, R = 0.33) and metabolites (ANOSIM: P = 0.001, R = 0.50) had different profiles during Baijiu fermentation. Among these sugars, glucose, fructose, and arabinose were identified as key sugars driving both the microbial and the metabolic diversity during Chinese Baijiu fermentation, and the metabolic diversity was positively correlated with the microbial diversity (P < 0.05). Hence, response surface methodology was used to establish a predictive model for regulating the metabolic diversity with the combination of three key sugars. The metabolic diversity significantly increased to 0.42 with the optimized levels of glucose (31.82 g/L), fructose (4.81 g/L), and arabinose (0.20 g/L), compared with unoptimized low-level average metabolic diversity (0.29). This work would provide a strategy to control microbial metabolism in spontaneous food fermentation, hence to improve the quality of fermented foods.

Combined impact of TiO2 nanoparticles and antibiotics on the activity and bacterial community of partial nitrification system

The effects of TiO2 nanoparticles (nano-TiO2) together with antibiotics leaking into wastewater treatment plants (WWTPs), especially the partial nitrification (PN) process remain unclear. To evaluate the combined impact and mechanisms of nano-TiO2 and antibiotics on PN systems, batch experiments were carried out with six bench-scale sequencing batch reactors. Nano-TiO2 at a low level had minimal effects on the PN system. In combination with tetracycline and erythromycin, the acute impact of antibiotics was enhanced. Both steps of nitrification were retarded due to the decrease of bacterial activity and abundance, while nitrite-oxidizing bacteria were more sensitive to the inhibition than ammonia-oxidizing bacteria. Proteobacteria at the phylum level and Nitrosospira at the genus level remained predominant under single and combined impacts. The flow cytometry analysis showed that nano-TiO2 enhanced the toxicity of antibiotics through increasing cell permeability. Our results can help clarify the risks of nano-TiO2 combined with antibiotics to PN systems and explaining the behavior of nanoparticles in WWTPs.

Enhanced proteins and amino acids production based on ammonia nitrogen assimilation and sludge increment by the integration of bioadsorption with anaerobic-anoxic-oxic (AAO) process

Poor effect of contaminants removal efficiency and low organic matter content of activated sludge are common in wastewater treatment plants (WWTPs) in China due to the low-strength wastewater. An anaerobic-anoxic-oxic (AAO) and an adsorption/AAO (A/AAO) combined system were established simultaneously to conduct a comparative study for realizing the conversion of carbon source in influent and the enrichment and recovery of proteins and amino acids through the assimilation of ammonia nitrogen. The experimental results showed that 63.5% of the organic matter in influent was adsorbed and flocculated in adsorption process, and the removal rates of chemical oxygen demand, total nitrogen and total phosphorus in A/AAO process were 88.7%, 77.1%, and 93.0% respectively, which were remarkably better than those in AAO process owing to the addition of improved carbon source. Ammonia assimilation rate of A/AAO process was 26.7% higher than that of AAO process, which implied that the ammonia used to synthesize sludge protein was prominently increased. Furthermore, intracellular proteins and amino acids in A/AAO process were 20% higher than those of AAO process, and the quality was equivalent with fish meal or soybean meal as feed. In addition, the microbial community analysis based on 16S rDNA was conducted. Dechloromonas, Zoogloea, Nitrospira, and Flavobacterium were the main genera, and played important roles in nutrient removal and ammonia nitrogen assimilation. The integration of adsorption process was significant to low-strength wastewater treatment and the improvement of excess sludge quality, which is a prospective inspiration for the resource recovery-based wastewater treatment process.

Linkage of community composition and function over short response time in anaerobic digestion systems with food fermentation wastewater

We investigated the short-term dynamics of microbial composition and function in bioreactors with inocula collected from full-scale and laboratory-based anaerobic digestion (AD) systems. The Bray-Curtis dissimilarity of both inocula was approximately 10% of the predicted Kyoto Encyclopedia of Genes and Genomes pathway and 40% of the taxonomic composition and yet resulted in a similar performance in methane production, implying that the variation of community composition may be decoupled from performance. However, the significant correlation of volatile fatty acids with taxonomic variation suggested that the pathways of AD could be different because of the varying genus. The predicted function of the significantly varying genus was mostly related to fermentation, which strengthened the conclusion that most microbial variation occurred within the fermentative species and led to alternative routes to result in similar methane production in methanogenic bioreactors. This finding sheds some light on the understanding of AD community regulation, which depends on the aims to recover intermediates or methane.

Efficiency of sulfamethoxazole removal from wastewater using aerobic granular sludge: influence of environmental factors

The effects of adsorption, sulfamethoxazole (SMX) content, chemical oxygen demand (COD), and dissolved oxygen (DO) are recognized to be crucial for SMX removal in the aerobic granular sludge (AGS) system. Therefore, we investigated the impact of adsorption and these three different environmental factors on the SMX removal loading rate and removal efficiency of an AGS system, and determined the differences in microbial community composition under different environmental conditions. Adsorption was not the main SMX removal mechanism, as it only accounted for 5% of the total removal. The optimal SMX removal conditions were obtained for AGS when the COD, DO, and SMX concentrations were 600 mg/L, 8 mg/L, and 2,000 µg/L, respectively. The highest SMX removal efficiency was 93.53%. Variations in the three environmental factors promoted the diversity and changes of microbial communities in the AGS system. Flavobacterium, Thauera, and norank_f_Microscillaceae are key microorganisms in the AGS system. Thauera, and norank_f_Microscillaceae were sensitive to increases in SMX concentrations and beneficial for degrading high SMX concentrations. In particular, Flavobacterium abundances gradually decreased with increasing SMX concentrations.

Magnetic biochar production alters the molecular characteristics and biological response of pyrolysis volatile-derived water-soluble organic matter

The formed Fe oxides (minerals) in the magnetic biochar production process can facilitate its recovery and carbon retention rate. However, the influence of Fe oxides on pyrolysis volatile-derived water-soluble organic matter (PVWSOM, also called wood vinegar) has been largely overlooked. Results demonstrated that in-situ formed Fe oxides (α-Fe₂O₃ and Fe₃O₄) could obviously inhibit biomass cracking and accordingly reduce PVWSOM emissions, as indicated by decreased PVWSOM concentrations from 28.7 to 6.8 mg C/g biomass. FT-ICR MS results further indicated that Fe oxides suppressed the formation of large-molecular-weight PVWSOM compounds with high degree of unsaturation (DBE value > 5) and oxygen content (oxygen number > 5), leading to lower polarity and aromaticity. Therefore, the changes in PVWSOM molecular structures caused by Fe oxides relieved its toxicity on wheat seed growth, and reduced negative impact on soil microbial diversity and promoted soil bacterial Proteobacteria and Acidobacteria. These results indicate that molecular structures of PVWSOM from biomass pyrolysis also can be changed by Fe oxides to affect its application.

Metagenomic Insight of a Full Scale Eco-Friendly Treatment System of Textile Dye Wastewater Using Bioaugmentation of the Composite Culture CES-1

Effects of bioaugmentation of the composite microbial culture CES-1 on a full scale textile dye wastewater treatment process were investigated in terms of water quality, sludge reduction, dynamics of microbial community structures and their functional genes responsible for degradation of azo dye, and other chemicals. The removal efficiencies for Chemical Oxygen Demand (COD), Total Nitrogen (T-N), Total Phosphorus (T-P), Suspended Solids (SS), and color intensity (96.4%, 78.4, 83.1, 84.4, and 92.0, respectively) 300-531 days after the augmentation were generally improved after bioaugmentation. The denitrification linked to T-N removal appeared to contribute to the concomitant COD removal that triggered a reduction of sludge (up to 22%) in the same period of augmentation. Azo dye and aromatic compound degradation and other downstream pathways were highly metabolically interrelated. Augmentation of CES-1 increased microbial diversity in the later stages of augmentation when a strong microbial community selection of Acinetobacterparvus, Acinetobacterjohnsonii, Marinobacter manganoxydans, Verminephrobacter sp., and Arcobacter sp. occurred. Herein, there might be a possibility that the CES-1 augmentation could facilitate the indigenous microbial community successions so that the selected communities made the augmentation successful. The metagenomic analysis turned out to be a reasonable and powerful tool to provide with new insights and useful biomarkers for the complex environmental conditions, such as the full scale dye wastewater treatment system undergoing bioaugmentation.

Core activated sludge communities are influenced little by immigration: Case study of a membrane bioreactor plant

Microbial immigrants arriving with influent wastewater may influence activated sludge (AS) ecosystems. However, the extent to which immigration impacts AS communities is still debated. To explore the intensity of immigration impact, we used sequencing technology to track the raw wastewater and AS communities from a membrane bioreactor plant over a 12-month period. We first distinguished core populations from peripheral ones in both raw wastewater and AS based on their occurrence frequency and abundance. The results showed that core OTUs (≥ 80% occurrence frequency) made up a large fraction (> 90%) of total sequences, while peripheral OTUs composed the majority of all detected OTUs but merely occupied a few sequences. A significant difference in core communities between the influent and AS was found, as well as between the compositions of core and peripheral populations. Additionally, the persistent functional bacteria of AS, although not numerically dominant, accounted for 96.24% of the total sequences related to nutrient turnover, suggesting the presence of a small number of longstanding and core functional bacteria in the AS ecosystem. Importantly, 64% of the 5188 OTUs in AS, which accounted for 91.51% of the sequences, exhibited positive growth rates, which suggested that their apparent abundances were due to growth within the plant, not from immigration. Taken together, these results demonstrated that the impact of influent populations on core AS communities was limited. Overall, this work provides quantitative insights into the impact of immigration, which is expected to advance our understanding of the AS community assembly.

Maintaining microbial diversity mitigates membrane fouling of an anoxic/oxic membrane bioreactor under starvation condition

The aim of this study was to evaluate the contribution of dissolved organic carbon (DOC) and microbial community dynamics to membrane fouling development in membrane bioreactor (MBR). We operated laboratory-scale anoxic/oxic-MBRs under prolonged starvation conditions in different seasons and the dynamics and diversity of the microbial communities were investigated. Although fouled-MBRs showed DOC accumulation in the activated sludge (AS), the fouling-mitigated MBR suggested that dissolved oxygen was consumed and DOC of the sludge supernatant was degraded. 16S rRNA genes analysis of AS in the MBRs revealed that Chitinophagaceae and Candidatus Promineofilum specifically increased in the fouling-mitigated MBR, suggesting that they played important roles in membrane fouling mitigation; high microbial diversity in the reactor also contributed to fouling mitigation. In the fouled reactor, enrichment of Xanthomonadaceae might be related to fouling causing substances formation leading to membrane fouling development; lower microbial diversity also contributed to fouling development in the fouled MBR.

Characteristics of bacterial populations in an industrial scale petrochemical wastewater treatment plant: Composition, function and their association with environmental factors

The efficiency of petrochemical wastewater biological treatment is dependent upon complex bacterial communities. A well understanding of the structure and function of bacterial community and their association with environmental variables is essential for the elucidation of contaminant removal mechanisms and optimization of wastewater treatment processes. In this study, the bacterial communities and metabolic functions in the primary hydrolysis acidification unit (PHAU), cyclic activated sludge system (CASS), secondary hydrolysis acidification unit (SHAU), and biological aerated filter (BAF) of a petrochemical wastewater treatment plant (WWTP) were studied via Illumina high-throughput sequencing. The correlations between bacterial community and environmental variables were also investigated. The phylum Proteobacteria, Planctomycetes, Chloroflexi, Acidobacteria and Bacteroidetes were dominant in the petroleum WWTP. The bacterial communities varied with wastewater characteristics and operational parameters, as a result of the differences in biosystems functions. Phylogenetic analysis showed that the genes involved in the degradation of benzoate, nitrotoluene and aminobenzoate degradation were abundant in PHAU, and the genes related to the degradation of benzoate, aminobenzoate, chloroalkane, chloroalkene, caprolactam, naphthalene and toluene were abundant in CASS, SHAU and BAF. The Redundancy analysis (RDA) suggested that biochemical oxygen demand (BOD₅), NH₄⁺-N and total nitrogen concentrations exhibited significant impacts in shaping the structure of bacterial community. Variance partitioning analysis (VPA) showed that 18.6% of the community variance was related to wastewater characteristics, higher than operational parameters of 4.5%. These results provide insight into microbial community structure and metabolic function during petrochemical wastewater treatment, and discern the relationships between bacterial community and environmental variables, which can provide basic data and a theoretical analysis of the design and operation optimization in petrochemical WWTP.

Bacterial community evolution along full-scale municipal wastewater treatment processes

Sewage pollution is a major threat to public health because sewage is always accompanied by pathogens. Generally, wastewater treatment plants (WWTP) receive and treat sewage to control pathogenic risks and improve environmental health. This study investigated the changes in the bacterial community over the course of treatment by a WWTP. Illumina MiSeq high-throughput sequencing was performed to characterize the bacterial communities in the WWTP. This study found that potential pathogens in the WWTP, especially the genera Arcobacter and Acinetobacter, were greatly reduced. In addition, high chemical oxygen demand levels provided excessive growth substrates for the genera Hyphomicrobium and Rhodoplanes, the abundance of which could exceed autotrophic bacteria, increasing the ammonium removal. According to the network analysis, the bacterial assemblage was not randomly arranged in the WWTP, and various defined processes led to higher intra-phylum (such as Proteobacteria) coexistence than expected. Moreover, the metabolic functions of bacterial communities significantly improved in the WWTP compared with the influent. Together, the data in this study emphasize the need to understand the bacterial community of WWTPs better. When analyzing the risks of WWTP drainage systems to the environment and human health, these data should be considered.

Performance and bacterial community structure of a novel inverse fluidized bed bioreactor (IFBBR) treating synthetic municipal wastewater

The performance of a lab-scale integrated anoxic and aerobic inverse fluidized bed bioreactors (IFBBR) for biological nutrient removal from synthetic municipal wastewater was studied at chemical oxygen demand (COD) loading rates of 0.34-2.10 kg COD/(m³-d) and nitrogen loading rates of 0.035-0.213 kg N/(m³-d). Total COD removal efficiencies of >84% were achieved, concomitantly with complete nitrification. The overall nitrogen removal efficiencies were >75%. Low biomass yields of 0.030-0.101 g VSS/g COD were achieved. Compared with other FBBR systems, the energy consumption for this IFBBR system was an average 59% less at organic loading rates (OLRs) of 1.02 and 2.10 kg COD/(m³-d). Bacterial community structures of attached and suspended biomass revealed that the dominant phyla were Proteobacteria, Bacteroidetes, and Epsilonbacteraeota, etc. The relative abundance of ammonia-oxidizing bacteria (AOBs) and nitrite-oxidizing bacteria (NOBs) in the aerobic attached biomass were 0.451% and 0.110%, respectively. COD mass balance in the anoxic zone was closed by consideration of sulfate reduction, which was confirmed by the presence of genus Chlorobium (sulfate-reducing bacteria) in the anoxic attached biofilm with a relative abundance of 0.32%.

Biogeography and Assembly of Microbial Communities in Wastewater Treatment Plants in China

Scientific understanding of microbial biogeography and assembly is lacking for activated sludge microbial communities, even though the diversity of microbial communities in wastewater treatment plants (WWTPs) is thought to have a direct influence on system performance. Here, utilizing large-scale 16S rRNA gene data generated from 211 activated sludge samples collected from 15 cities across China, we show activated sludge microbes, whose growth and metabolism can be regulated followed with the metabolic theory of ecology with an apparent Ea value (apparent activation energy) of 0.08 eV. WWTPs at a lower latitude tend to harbor a more diverse array of microorganisms. In agreement with the general understanding, the activated sludge microbial assembly was mainly driven by deterministic processes and the mean annual temperature was identified as the most important factor affecting the microbial community structure. The treatment process types with similar microbial growth types and functions had a distinct impact on the activated sludge microbial community structure only when WWTPs were located near each other and received similar influent. Overall, these findings provide us with a deeper understanding of activated sludge microbial communities from an ecological perspective. Moreover, these findings suggest that, for a given set of performance characteristics (e.g., combined nitrification, denitrification, and phosphorus removal), it may be difficult to employ common engineering levers to control additional aspects of community structure due to the influence of natural environmental factors.

Promising carbon utilization for nitrogen recovery in low strength wastewater treatment: Ammonia nitrogen assimilation, protein production and microbial community structure

Acetic acid and sodium acetate are generally supplied to wastewater treatment plants (WWTPs) in China to improve total nitrogen (TN) and total phosphorus (TP) removal, and the addition of carbon source also facilitates to increase sludge growth rate and further provides material basis for the extraction of proteins and amino acids from activated sludge. To recycle ammonia nitrogen resources, a system that combined adsorption and anaerobic-anoxic-oxic (A/AAO) process for treating low strength wastewater was established. Experimental results showed that by the addition of carbon substrate from a mixture of anaerobically fermented adsorption sludge, the average removal efficiency of chemical oxygen demand (COD), ammonia nitrogen, TN, and TP were 88%, 96.9%, 93.9%, and 92.1%, respectively, and the ratio of nitrogen assimilation to nitrogen dissimilation significantly increased by a factor of 2.5. Through energy analysis (based on adenosine triphosphate, ATP), sludge flocculation capacity and settling property, it was found that the AAO process sludge presented the logarithmic growth characteristics. The respective sludge protein and amino acids contents increased by over 11.4% and 40.3%, and the synthetic products of glutamic acid, alanine and aspartate increased through the assimilation of ammonia nitrogen, thereby indicating that replenishing the carbon substrate could markedly enhance protein and amino acids contents in AAO process sludge. Moreover, the diversity of the microbial community in adsorption process was relatively rich, the diversity in the adsorption process sludge was the highest, while the diversity of the AAO process sludge evidently decreased. The microbial community in each process was similarly based on 16S rDNA gene sequence analysis, microflora was prominent in the AAO process, with Dechloromonas, Flavobacterium, Zoogloea, Unclassified_Rhodocyclaceae and Thauera as the dominant species. Promising carbon utilization facilitates contaminants removal in low strength wastewater treatment and is conducive to protein production through ammonia nitrogen assimilation.

Advanced Bioreactor Treatments of Hydrocarbon-Containing Wastewater

This review discusses bioreactor-based methods for industrial hydrocarbon-containing wastewater treatment using different (e.g., stirred-tank, membrane, packed-bed and fluidized-bed) constructions. Aerobic, anaerobic and hybrid bioreactors are becoming increasingly popular in the field of oily wastewater treatment, while high concentrations of petroleum hydrocarbons usually require physico-chemical pre-treatments. Most efficient bioreactor techniques employ immobilized cultures of hydrocarbon-oxidizing microorganisms, either defined consortia or mixed natural populations. Some advantages of fluidized-bed bioreactors over other types of reactors are shown, such as large biofilm–liquid interfacial area, high immobilized biomass concentration and improved mass transfer characteristics. Several limitations, including low nutrient content and the presence of heavy metals or toxicants, as well as fouling and contamination with nuisance microorganisms, can be overcome using effective inocula and advanced bioreactor designs. The examples of laboratory studies and few successful pilot/full-scale applications are given relating to the biotreatment of oilfield wastewater, fuel-contaminated water and refinery effluents.

Characterizing community dynamics and exploring bacterial assemblages in two activated sludge systems

Bacterial communities in the activated sludge (AS) determine the wastewater treatment performance in the municipal wastewater treatment plants (WWTPs). Aiming at identifying the affecting factors and the variation patterns of the bacterial assemblages in AS, a 2-year time-series AS samples were collected from two separated WWTPs and metagenomic sequencing was conducted. Obvious seasonal shift and succession of the bacterial community were observed in both WWTPs on the genus and species levels, especially for the persistent taxa, implying that temperature was a decisive factor for maintaining bacterial assemblage patterns in long-term period. Taxa abundance distribution (TAD) concerning occurrence frequency and average abundance were found fitting for exponential formulations, and the approximately equal total abundance of persistent taxa suggested that stable and high abundance (~ 90%) of core functional bacterial groups would help to maintain wastewater treatment performance. Drastic changes of environmental factors were found causing temporally significant bacterial structure variation, while the innate correlations between bacterial species could recover the community gradually and maintain relative stability of the AS system. Delayed correlations between environmental factors and abundant (persistent or intermittent) bacterial species were observed widely, while synchronous biotic interactions were identified more frequently. Besides, bacterial species with similar functions were prone to cluster together and shared the same seasonal variation pattern, implicating that the cooperation of functional correlated taxa played the most dominant role in shaping the bacterial assemblages. Furthermore, rare bacterial groups were to be explored for removing emerging pollutants with lower concentrations. The results of this study would assist dealing with operational defect and optimize the treatment system in WWTPs.

Composition of bacterial communities in municipal wastewater treatment plant

Efforts to understand the environmental and biological factors that influence the dynamics of microbial communities have received substantial attention in microbial ecology. In this study, Illumina MiSeq high-throughput sequencing technology was used to examine the microbial community structure of activated sludge in municipal wastewater treatment systems (Chuzhou city, China). Overall, Proteobacteria, Chloroflexi, Actinobacteria, Acidobacteria, Actinobacteria, Bacteroidetes, and Firmicutes were the most dominant phyla in the five activated sludge samples. However, the community structure of nitrifying bacteria was relatively simple, and diversity was low; only AOB (Nitrosomonas) and NOB (Nitrospira) were detected. The dominant bacteria in the anaerobic sludge, anoxic sludge and oxic sludge were the same, and each bacterial species was relatively uniform, with differences only in proportions. Redundancy analysis indicated that pH, TP and COD were strong environmental factors influencing the bacterial community distribution. PICRUSt was used to describe the metabolic and functional abilities of the activated sludge bacterial communities. The results emphasized the vast genetic diversity of these organisms, which are involved in various essential processes such as amino acid transport and metabolism, energy production and conversion, cell wall/membrane/envelope/biogenesis, signal transduction mechanisms, and carbohydrate transport and metabolism. Activated sludge of municipal wastewater treatment systems can be ranked in the following order based on the 16S rRNA gene copy numbers of the detected phylotypes: S1 > S2 > S4 > S5 > S3. This study provides basic data and a theoretical analysis of the optimal design and operation in wastewater treatment plants.

Enhancing nitrogen removal from wastewater in sequencing batch reactors (SBRs) using additional carbon source produced from food waste acidogenic fermentation at different temperatures

Fermentation slurry from food waste (FSFW) produced at different temperatures (20, 37, and 55 °C) was utilized as external carbon source for promoting nitrogen removal in this study. It was found that high temperatures improved the hydrolysis rate by promoting the hydrolytic enzyme activity. Mesophilic temperature (37 °C) was favorable for organic acid (especially lactic acid) production by selectively enriching the Lactobacillus (with a relative abundance of 90.6%), while thermophilic temperature (55 °C) would restrict the acidogenesis rate (18.9%) and result in the accumulation of carbohydrate in the fermented slurry. Organic acids in the FSFW act as easily biodegradable carbon sources, but the macromolecular and particulate organic components can be utilized as slowly biodegradable carbon sources in the denitrification processes. Using the FSFW as carbon sources to enhance nitrogen removal from wastewater in sequencing batch reactors (SBRs) for more than 150 days, the FSFW produced at thermophilic temperature could significantly promote the microbial metabolic capacity of the activated sludge and improve the nitrogen and phosphate removal efficiencies.

The interactions of algae-activated sludge symbiotic system and its effects on wastewater treatment and lipid accumulation

The ability of Scenedesmus sp. 336, Chlorella sp. 1602 and activated sludge (AS) alone or in combination to remove nutrients and accumulate lipid in artificial municipal wastewater under light/dark conditions was studied. The symbiotic systems showed greater advantages than the sterile systems. Scenedesmus sp. 336 + AS system obtained the highest lipid productivity after seven days of cultivation in light, while the NO₃^--N and COD were completely absorbed and utilized, as well as the removal rate of PO₄^3--P and NH₄⁺-N were 99.82% and 87.13%, respectively. Total superoxide dismutase (SOD) activity was measured to demonstrate the relationship between oxidative stress and lipid accumulation. Besides, the results of microbial analysis showed that some dominant plant growth-promoting bacteria could secrete indole-3-acetic acid (IAA) to enhance the interaction between algae and bacteria, and the denitrifying bacteria that could coexist with microalgae also improved the efficiency of wastewater treatment in the symbiotic systems.

The capacity of wastewater treatment plants drives bacterial community structure and its assembly

Bacterial communities in wastewater treatment plants (WWTPs) affect plant functionality through their role in the removal of pollutants from wastewater. Bacterial communities vary extensively based on plant operating conditions and influent characteristics. The capacity of WWTPs can also affect the bacterial community via variations in the organic or nutrient composition of the influent. Despite the importance considering capacity, the characteristics that control bacterial community assembly are largely unknown. In this study, we discovered that bacterial communities in WWTPs in Korea and Vietnam, which differ remarkably in capacity, exhibit unique structures and interactions that are governed mainly by the capacity of WWTPs. Bacterial communities were analysed using 16S rRNA gene sequencing and exhibited clear differences between the two regions, with these differences being most pronounced in activated sludge. We found that capacity contributed the most to bacterial interactions and community structure, whereas other factors had less impact. Co-occurrence network analysis showed that microorganisms from high-capacity WWTPs are more interrelated than those from low-capacity WWTPs, which corresponds to the tighter clustering of bacterial communities in Korea. These results will contribute to the understanding of bacterial community assembly in activated sludge processing.

Distinct Successions of Common and Rare Bacteria in Soil Under Humic Acid Amendment - A Microcosm Study

Humic acid (HA) is widely used for soil quality improvement, yet little is known how bacterial communities, especially common and rare bacteria, respond to HA amendment, which is crucial to understand biodiversity and function in agroecosystem. Therefore, a manipulated microcosm experiment with a gradient of HA amendment was conducted to unveil this. The results showed that common and rare taxa had similar patterns in species richness, while rare taxa exhibited a higher turnover, which caused their higher structural dissimilarity. Common species with wider niche breadths were more strongly influenced by deterministic filtering when compared to rare taxa, which occupied narrow niches and were primarily controlled by stochastic processes. Generally, species with wider niche breadths were always more strongly influenced by deterministic selection. The analysis of predicted functions revealed that rare taxa occupied more unique predicted functional traits than common taxa, suggesting that rare taxa played a key role in maintaining the functional diversity. In addition, there was a significant positive correlation between species richness and predicted functional diversity in rare taxa rather than common taxa. Our findings highlight the distinct structural and predicted functional successions of common and rare bacteria in soil under HA amendment.

How the bacterial community of a tannery effluent responds to bioaugmentation with the consortium SFC 500-1. Impact of environmental variables

Bioaugmentation with the consortium SFC 500-1 is a promising alternative to remediate wastewaters, such as tannery effluents. With the aim of assessing the changes produced in response to bioaugmentation, bacterial 16S rDNA genes were sequenced with Illumina MiSeq Platform. Additionally, bacterial and fungal groups were analyzed through standard culture dependent methods. The impact of diverse physico-chemical and microbiological parameters on the prokaryotic diversity was also evaluated throughout. Bacteroidetes, Firmicutes and Proteobacteria, represented together up to 91% of the total number of sequences obtained from the tannery effluent. Diversity decreased immediately after inoculation, due to an increase in the representation of the taxa to which the added consortium belongs. However, bioaugmentation produced no greater variations since only a 10% of unique operational taxonomic units were found in the inoculated treatment. An increase in the abundance of Myroides and a reduction in the representation of Proteiniclasticum and Halomonas were major observed variations. On the other hand, pH and dissolved oxygen constituted main environmental factors affecting the structure of the prokaryotic communities. In all treatments yeasts increased over time, to the detriment of filamentous fungi. Together, data from this report may contribute to the development of improved bioremediation strategies of industrial wastewaters.

Nexus of Stochastic and Deterministic Processes on Microbial Community Assembly in Biological Systems

Microbial community assembly in engineered biological systems is often simultaneously influenced by stochastic and deterministic processes, and the nexus of these two mechanisms remains to be further investigated. Here, three lab-scale activated sludge reactors were seeded with identical inoculum and operated in parallel under eight different sludge retention time (SRT) by sequentially reducing the SRT from 15 days to 1 day. Using 16S rRNA gene amplicon sequencing data, the microbial populations at the start-up (15-day SRT) and SRT-driven (≤10-day SRT) phases were observed to be noticeably different. Clustering results demonstrated ecological succession at the start-up phase with no consistent successional steps among the three reactors, suggesting that stochastic processes played an important role in the community assembly during primary succession. At the SRT-driven phase, the three reactors shared 31 core operational taxonomic units (OTUs). Putative primary acetate utilizers and secondary metabolizers were proposed based on K-means clustering, network and synchrony analysis. The shared core populations accounted for 65% of the total abundance, indicating that the microbial communities at the SRT-driven phase were shaped predominantly by deterministic processes. Sloan’s Neutral model and a null model analysis were performed to disentangle and quantify the relative influence of stochastic and deterministic processes on community assembly. The increased estimated migration rate in the neutral community model and the higher percentage of stochasticity in the null model implied that stochastic community assembly was intensified by strong deterministic factors. This was confirmed by the significantly different α- and β-diversity indices at SRTs shorter than 2 days and the observation that over half of the core OTUs were unshared or unsynchronized. Overall, this study provided quantitative insights into the nexus of stochastic and deterministic processes on microbial community assembly in a biological process.

Evaluation of 16S next-generation sequencing of hypervariable region 4 in wastewater samples: An unsuitable approach for bacterial enteric pathogen identification

Recycled wastewater can carry human-infectious microbial pathogens and therefore wastewater treatment strategies must effectively eliminate pathogens before recycled wastewater is used to supplement drinking and agricultural water supplies. This study characterised the bacterial composition of four wastewater treatment plants (WWTPs) (three waste stabilisation ponds and one oxidation ditch WWTP using activated sludge treatment) in Western Australia. The hypervariable region 4 (V4) of the bacterial 16S rRNA (16S) gene was sequenced using next-generation sequencing (NGS) on the Illumina MiSeq platform. Sequences were pre-processed in USEARCH v10.0 and denoised into zero-radius taxonomic units (ZOTUs) with UNOISE3. Taxonomy was assigned to the ZOTUs using QIIME 2 and the Greengenes database and cross-checked with the NCBI nr/nt database. Bacterial composition of all WWTPs and treatment stages (influent, intermediate and effluent) were dominated by Proteobacteria (29.0-87.4%), particularly Betaproteobacteria (9.0-53.5%) and Gammaproteobacteria (8.6-34.6%). Nitrifying bacteria (Nitrospira spp.) were found only in the intermediate and effluent of the oxidation ditch WWTP, and denitrifying and floc-forming bacteria were detected in all WWTPs, particularly from the families Comamonadaceae and Rhodocyclales. Twelve pathogens were assigned taxonomy by the Greengenes database, but comparison of sequences from genera and families known to contain pathogens to the NCBI nr/nt database showed that only three pathogens (Arcobacter venerupis, Laribacter hongkongensis and Neisseria canis) could be identified in the dataset at the V4 region. Importantly, Enterobacteriaceae genera could not be differentiated. Family level taxa assigned by Greengenes database agreed with NCBI nr/nt in most cases, however, BLAST analyses revealed erroneous taxa in Greengenes database. This study highlights the importance of validating taxonomy of NGS sequences with databases such as NCBI nr/nt, and recommends including the V3 region of 16S in future short amplicon NGS studies that aim to identify bacterial enteric pathogens, as this will improve taxonomic resolution of most, but not all, Enterobacteriaceae species.

High variations of methanogenic microorganisms drive full-scale anaerobic digestion process

Anaerobic digestion is one of the most successful waste management strategies worldwide, wherein microorganisms play an essential role in reducing organic pollutants and producing renewable energy. However, variations of microbial community in full-scale anaerobic digesters, particularly functional groups relevant to biogas production, remain elusive. Here, we examined microbial community in a year-long monthly time series of 3 full-scale anaerobic digesters. We observed substantial diversification in community composition, with only a few abundant OTUs (e.g. Clostridiales, Anaerolineaceae and Methanosaeta) persistently present across different samples. Similarly, there were high variations in relative abundance of methanogenic archaea and methanogenic genes, which were positively correlated (r² = 0.530, P < 0.001). Variations of methanogens explained 55.7% of biogas producing rates, much higher than the explanatory percentage of environmental parameters (16.4%). Hydrogenotrophic methanogens, especially abundant Methanomicrobiales taxa, were correlated with biogas production performance (r = 0.665, P < 0.001) and nearly all methanogenic genes (0.430 < r < 0.735, P < 0.012). Given that methanogenic archaea or genes are well established for methanogenesis, we conclude that high variations in methanogenic traits (e.g. taxa or genes) are responsible for biogas production variations in full-scale anaerobic digesters.

Distinct microbially induced concrete corrosion at the tidal region of reinforced concrete sewers

Microbially induced concrete corrosion (MICC) is a major deterioration affecting sewers worldwide. MICC is not uniform on sewer inner walls and often occurs at hot spots such as crown and tidal regions, which are critical to determine sewer service life. Especially, concrete corrosion in tidal regions is complicated due to the fluctuation of wastewater levels and the hydraulic scouring effects. The traditional methodology of corrosion monitoring also limits the study of the tidal corrosion. In this study, by using a combination of various advanced mineral analytical techniques and culture-independent 16S rRNA gene amplicon sequencing, the development of corrosion, the formation of corrosion products and the variation of microbial communities in tidal regions were investigated systematically. The physical-chemical characteristics in tidal regions varied with the distance from the wastewater surface. Above the wastewater, more severe corrosion was detected with a closer distance to wastewater, producing gypsum as the major corrosion products. The microbial succession in tidal regions occurred, with the coexistence of conventional autotrophic SOB and acidophilic heterotrophic bacteria initially, and shifting to the predominant colonization of Mycobacterium when pH reached around 1. The heterotrophic bacteria, i.e. Mycobacterium and Bacillus, were likely responsible for the observed corrosion due to the potential capability in generating sulfuric acid. The applications of advanced mineral and microbial analytical techniques were demonstrated effective in improving the understanding of concrete sewer corrosion.

Operation mode of a step-feed anoxic/oxic process with distribution of carbon source from anaerobic zone on nutrient removal and microbial properties

This study investigated the operation mode of a step-feed anoxic/oxic (A/O) process with distribution of the carbon source from the anaerobic zone in terms of the treatment effects on sewage with low carbon and high nitrogen and phosphorus. After seven phases of operation, an optimal flow distribution ratio of 75%:25% was obtained from the anaerobic zone, and the concentrations of chemical oxygen demand, ammonia nitrogen, total nitrogen, and total phosphorous in the effluent were 20.8, 0.64, 14.2, and 0.89 mg/L, respectively. The presence of an internal reflux system in the deaeration zone improved the treatment. 16S rRNA high-throughput sequencing revealed that the microbial communities in aerobic zone I(O1) of the first-step A/O sludge were different from those in aerobic zone I (O2) of the second-step A/O sludge, whereas microbial communities of the seed sludge were similar to those in O2 of the second-step A/O sludge. The richness and diversity of microbial communities in O1 of the first-step A/O sludge samples were higher than those in O2 of the second-step A/O and seed sludge. At the optimal flow distribution ratio, the microbial abundance and treatment removal efficiency were the highest.