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Yeom S, Kim DY, Kim S, Gontala A, Park J, Lee YH, Kim HJ. Carboxylate-Directed Pd-Catalyzed β-C(sp 3)-H Arylation of N-Methyl Alanine Derivatives for Diversification of Bioactive Peptides. Org Lett 2023; 25:9008-9013. [PMID: 38084750 DOI: 10.1021/acs.orglett.3c03616] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2023]
Abstract
This study presents a Pd(II)-catalyzed method for the β-C(sp3)-H arylation of N-Cbz- or N-Fmoc-protected N-methyl alanines, providing ready access to building blocks for N-methylated peptide synthesis. For this transformation, the native carboxylate was exploited as the directing group, attributing its success to the use of a monoprotected amino-pyridine ligand. Its synthetic utility was demonstrated by facile generation of nine analogues of the naturally occurring N-methylated cyclic peptide cycloaspeptide A.
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Affiliation(s)
- Suyeon Yeom
- Department of Chemistry and Center for Proteogenome Research, Korea University, Seoul 02841, Republic of Korea
| | - Do Young Kim
- Department of Chemistry and Center for Proteogenome Research, Korea University, Seoul 02841, Republic of Korea
| | - Seungwoo Kim
- Department of Chemistry and Center for Proteogenome Research, Korea University, Seoul 02841, Republic of Korea
| | - Arjun Gontala
- Department of Chemistry and Center for Proteogenome Research, Korea University, Seoul 02841, Republic of Korea
| | - Jimin Park
- Department of Chemistry and Center for Proteogenome Research, Korea University, Seoul 02841, Republic of Korea
| | - Yong Ho Lee
- Department of Chemistry and Center for Proteogenome Research, Korea University, Seoul 02841, Republic of Korea
| | - Hak Joong Kim
- Department of Chemistry and Center for Proteogenome Research, Korea University, Seoul 02841, Republic of Korea
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2
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Beheshti A, Mousavifard ES, Noorizadeh S, Mayer P, Woźniak K. Impact of cyanide co-ligand to convert crystal structure of pyrazole-based copper coordination compounds from a dinuclear to a polymeric structure and DFT calculations of [Cu2(tpmp)X2] (X = Cl and I). Inorganica Chim Acta 2019. [DOI: 10.1016/j.ica.2019.119082] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
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3
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Karthikeyan M, Ramakrishna B, Vellaiyadevan S, Divya D, Manimaran B. Amide-Functionalized Chalcogen-Bridged Flexible Tetranuclear Rhenacycles: Synthesis, Characterization, Solvent Effect on the Structure, and Guest Binding. ACS OMEGA 2018; 3:3257-3266. [PMID: 31458582 PMCID: PMC6641653 DOI: 10.1021/acsomega.7b02075] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/17/2018] [Accepted: 02/12/2018] [Indexed: 06/10/2023]
Abstract
The synthesis of flexible rhenium(I)-based amide-functionalized chalcogen-bridged tetranuclear metallacycles of general formula [{(CO)3Re(μ-ER)2Re(CO)3}2(μ-L)2] (1-8) was achieved by treating rhenium carbonyl with dialkyl/diaryl chalcogenide (RE-ER; E = S and Se) in the presence of ditopic flexible or semiflexible pyridyl ligand with amide functionality (L = N,N'-bis(4-pyridylcarboxamide)-1,2-ethane (bpce) and N,N'-bis(4-(4-pyridylcarboxamide)phenyl)methane (bpcpm)). Compounds 1-8 were formed by multicomponent self-assembly under one-pot reaction conditions via oxidative addition of dialkyl/diaryl chalcogenide to rhenium carbonyl with pyridyl ligands. The resultant metallacyclophanes were characterized using elemental analyses, infrared, ultraviolet-visible, and NMR spectroscopic techniques. Metallacyclophanes 1-3 and 7 were structurally characterized by single-crystal X-ray diffraction methods. The solvent-induced structural change of flexible tetranuclear metallacyclophane 2 was demonstrated by crystallizing 2 in dichloroethane and dimethylformamide. Molecular recognition capabilities of 2 and 7 were studied with few aromatic compounds containing ethereal linkages.
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4
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Tsuge K, Chishina Y, Hashiguchi H, Sasaki Y, Kato M, Ishizaka S, Kitamura N. Luminescent copper(I) complexes with halogenido-bridged dimeric core. Coord Chem Rev 2016. [DOI: 10.1016/j.ccr.2015.03.022] [Citation(s) in RCA: 153] [Impact Index Per Article: 19.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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5
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Kumar S, Mani G, Dutta D, Mishra S. Structural Diversity of Copper(I) Complexes Formed by Pyrrole- and Dipyrrolylmethane-Based Diphosphine Ligands with Cu–X···HN Hydrogen Bonds. Inorg Chem 2014; 53:700-9. [PMID: 24392950 DOI: 10.1021/ic402253y] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Affiliation(s)
- Shanish Kumar
- Department
of Chemistry, Indian Institute of Technology − Kharagpur, Kharagpur, West Bengal, India 721 302
| | - Ganesan Mani
- Department
of Chemistry, Indian Institute of Technology − Kharagpur, Kharagpur, West Bengal, India 721 302
| | - Debodyuti Dutta
- Department
of Chemistry, Indian Institute of Technology − Kharagpur, Kharagpur, West Bengal, India 721 302
| | - Sabyashachi Mishra
- Department
of Chemistry, Indian Institute of Technology − Kharagpur, Kharagpur, West Bengal, India 721 302
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Houser RP, Wang Z, Powell DR, Hubin TJ. Copper(I) and copper(II) complexes with pyrazine-containing pyridylalkylamide ligands N-(pyridin-2-ylmethyl)pyrazine-2-carboxamide and N-(2-(pyridin-2-yl)ethyl)pyrazine-2-carboxamide. J COORD CHEM 2013. [DOI: 10.1080/00958972.2013.860451] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Affiliation(s)
- Robert P. Houser
- Department of Chemistry and Biochemistry, University of Northern Colorado, Greeley, CO, USA
| | - Zhaodong Wang
- Department of Chemistry and Biochemistry, University of Oklahoma, Norman, OK, USA
| | - Douglas R. Powell
- Department of Chemistry and Biochemistry, University of Oklahoma, Norman, OK, USA
| | - Timothy J. Hubin
- Department of Chemistry and Physics, Southwestern Oklahoma State University, Weatherford, OK, USA
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7
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Trapp I, Löble M, Meyer J, Breher F. Copper complexes of tripodal κ6N-donor ligands: A structural, EPR spectroscopic and electrochemical study. Inorganica Chim Acta 2011. [DOI: 10.1016/j.ica.2011.02.045] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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8
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Weng ZH, Chen ZL, Liang FP. Synthesis and structures of three heterobimetallic compounds based on a new ferrocenyl pyridine ligand. J COORD CHEM 2010. [DOI: 10.1080/00958970802715934] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Affiliation(s)
- Zhe-Hui Weng
- a College of Chemistry and Chemical Engineering, Nanjing University , Nanjing 210093, P.R.China
- b College of Chemistry and Chemical Engineering, Guangxi Normal University , Guilin 541004, P.R.China
| | - Zi-Lu Chen
- b College of Chemistry and Chemical Engineering, Guangxi Normal University , Guilin 541004, P.R.China
| | - Fu-Pei Liang
- b College of Chemistry and Chemical Engineering, Guangxi Normal University , Guilin 541004, P.R.China
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Yang L, Powell DR, Houser RP. Copper(II) coordination chemistry of 2-methyl-2-(2-pyridyl)-1,3-propan-diol: Syntheses and structures of mono-, di-, and tricopper complexes. Polyhedron 2010. [DOI: 10.1016/j.poly.2010.03.008] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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10
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Hahn FE, Schröder H, Pape T, Hupka F. Zinc(II), Copper(II), and Nickel(II) Complexes of Bis(tripodal) Diamide Ligands - Reversible Switching of the Amide Coordination Mode upon Deprotonation. Eur J Inorg Chem 2010. [DOI: 10.1002/ejic.200901145] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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11
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Shakya R, Powell DR, Houser RP. Unsupported μ-Oxo- and μ-Hydroxo-Iron(III) Dimers and Mononuclear Iron(III) Complexes with Pyridylbis(aminophenol) Ligands. Eur J Inorg Chem 2009. [DOI: 10.1002/ejic.200900794] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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12
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Gennari M, Lanfranchi M, Marchiò L. Novel carbon-centered heteroscorpionate ligands: Cu(I) complexes and luminescence properties. Inorganica Chim Acta 2009. [DOI: 10.1016/j.ica.2009.05.014] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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13
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Syntheses and structures of a phenoxo-bridged copper(II) distorted cubane and related complexes with 2-hydroxy-N-(2-pyridylalkyl)benzamide ligands. INORG CHEM COMMUN 2009. [DOI: 10.1016/j.inoche.2009.04.007] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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14
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Chaudhuri UP, Powell DR, Houser RP. New examples of μ-η2:η2-disulfido dicopper(II,II) complexes with bis(tetramethylguanidine) ligands. Inorganica Chim Acta 2009. [DOI: 10.1016/j.ica.2008.10.030] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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15
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Shakya R, Jozwiuk A, Powell DR, Houser RP. Synthesis and Characterization of Polynuclear Copper(II) Complexes with Pyridylbis(phenol) Ligands. Inorg Chem 2009; 48:4083-8. [DOI: 10.1021/ic9000768] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Rajendra Shakya
- Department of Chemistry and Biochemistry, University of Oklahoma, Norman, Oklahoma, 73019
| | - Anna Jozwiuk
- Department of Chemistry and Biochemistry, University of Oklahoma, Norman, Oklahoma, 73019
| | - Douglas R. Powell
- Department of Chemistry and Biochemistry, University of Oklahoma, Norman, Oklahoma, 73019
| | - Robert P. Houser
- Department of Chemistry and Biochemistry, University of Oklahoma, Norman, Oklahoma, 73019
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Koch C, Kahnes M, Schulz M, Görls H, Westerhausen M. Lithium and Zinc Complexes of
C
‐ and
N
‐Functionalized (2‐Pyridylmethyl)amines. Eur J Inorg Chem 2008. [DOI: 10.1002/ejic.200701168] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Christian Koch
- Institut für Anorganische und Analytische Chemie, Friedrich‐Schiller‐Universität Jena, August‐Bebel‐Str. 2, 07743 Jena, Germany, Fax: +49‐03641‐9‐48102
| | - Marcel Kahnes
- Institut für Anorganische und Analytische Chemie, Friedrich‐Schiller‐Universität Jena, August‐Bebel‐Str. 2, 07743 Jena, Germany, Fax: +49‐03641‐9‐48102
| | - Martin Schulz
- Institut für Anorganische und Analytische Chemie, Friedrich‐Schiller‐Universität Jena, August‐Bebel‐Str. 2, 07743 Jena, Germany, Fax: +49‐03641‐9‐48102
| | - Helmar Görls
- Institut für Anorganische und Analytische Chemie, Friedrich‐Schiller‐Universität Jena, August‐Bebel‐Str. 2, 07743 Jena, Germany, Fax: +49‐03641‐9‐48102
| | - Matthias Westerhausen
- Institut für Anorganische und Analytische Chemie, Friedrich‐Schiller‐Universität Jena, August‐Bebel‐Str. 2, 07743 Jena, Germany, Fax: +49‐03641‐9‐48102
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Pal Chaudhuri U, Yang L, Whiteaker LR, Mondal A, Fultz MR, Powell DR, Houser RP. Neutral pyridylmethylamide ligands and their mononuclear copper(II) complexes. Polyhedron 2007. [DOI: 10.1016/j.poly.2007.08.004] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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18
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Pal Chaudhuri U, Whiteaker LR, Mondal A, Klein EL, Powell DR, Houser RP. Substituted pyridylmethylamide ligands and their zinc complexes. Inorganica Chim Acta 2007. [DOI: 10.1016/j.ica.2007.05.003] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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19
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Yang L, Powell DR, Houser RP. Structural variation in copper(I) complexes with pyridylmethylamide ligands: structural analysis with a new four-coordinate geometry index, tau4. Dalton Trans 2007:955-64. [PMID: 17308676 DOI: 10.1039/b617136b] [Citation(s) in RCA: 2236] [Impact Index Per Article: 131.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Four Cu(I) complexes were synthesized with a family of pyridylmethylamide ligands, HL(R) [HL(R) = N-(2-pyridylmethyl)acetamide, R = null; 2,2-dimethyl-N-(2-pyridylmethyl)propionamide, R = Me(3); 2,2,2-triphenyl-N-(2-pyridylmethyl)acetamide, R = Ph(3))]. Complexes 1-3 were synthesized from the respective ligand and [Cu(CH(3)CN)(4)]PF(6) in a 2 : 1 molar ratio: [Cu(HL)(2)]PF(6) (1), [Cu(2)(HL(Me3))(4)](PF(6))(2) (2), [Cu(HL(Ph3))(2)]PF(6) (3). Complex 4, [Cu(HL)(CH(3)CN)(PPh(3))]PF(6), was synthesized from the reaction of HL with [Cu(CH(3)CN)(4)]PF(6) and PPh(3) in a 1 : 1 : 1 molar ratio. X-Ray crystal structures reveal that complexes 1, 3 and 4 are mononuclear Cu(I) species, while complex 2 is a Cu(I) dimer. The copper ions are four-coordinate with geometries ranging from distorted tetrahedral to seesaw in 1, 2, and 4. Complexes 1 and 2 are very air sensitive and they display similar electrochemical properties. The coordination geometry of complex 3 is nearly linear, two-coordinate. Complex 3 is exceptionally stable with respect to oxidation in the air, and its cyclic voltammetry shows no oxidation wave in the range of 0-1.5 V. The unusual inertness of complex 3 towards oxidation is attributed to the protection from bulky triphenyl substituent of the HL(Ph3) ligand. A new geometric parameter for four-coordinate compounds, tau(4), is proposed as an improved, simple metric for quantitatively evaluating the geometry of four-coordinate complexes and compounds.
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Affiliation(s)
- Lei Yang
- Department of Chemistry and Biochemistry, University of Oklahoma, Norman, Oklahoma 73019, USA
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