Water Oxidation by Mononuclear Ruthenium Complexes with TPA-Based Ligands

Strategic Synthesis of Heptacoordinated FeIII Bifunctional Complexes for Efficient Water Electrolysis

In this research, highly efficient heterogeneous bifunctional (BF) electrocatalysts (ECs) have been strategically designed by Fe coordination (CR ) complexes, [Fe2 L2 (H2 O)2 Cl2 ] (C1) and [Fe2 L2 (H2 O)2 (SO4 )].2(CH4 O) (C2) where the high seven CR number synergistically modifies the electronic environment of the Fe centre for facilitation of H2 O electrolysis. The electronic status of Fe and its adjacent atomic sites have been further modified by the replacement of -Cl- in C1 by -SO4 2- in C2. Interestingly, compared to C1, the O-S-O bridged C2 reveals superior BF activity with extremely low overpotential (η) at 10 mA cm-2 (140 mVOER , 62 mVHER ) and small Tafel slope (120.9 mV dec-1 OER , 45.8 mV dec-1 HER ). Additionally, C2 also facilitates a high-performance alkaline H2 O electrolyzer with cell voltage of 1.54 V at 10 mA cm-2 and exhibits remarkable long-term stability. Thus, exploration of the intrinsic properties of metal-organic framework (MOF)-based ECs opens up a new approach to the rational design of a wide range of molecular catalysts.

Metamorphic oxygen-evolving molecular Ru and Ir catalysts

Today sustainable and clean energy conversion strategies are based on sunlight and the use of water as a source of protons and electrons, in a similar manner as it happens in Photosystem II. To achieve this, the charge separation state induced by light has to be capable of oxidising water by 4 protons and 4 electrons and generating molecular oxygen. This oxidation occurs by the intermediacy of a catalyst capable of finding low-energy pathways via proton-coupled electron transfer steps. The high energy involved in the thermodynamics of water oxidation reaction, coupled with its mechanistic complexity, is responsible for the difficulty of discovering efficient and oxidatively robust molecules capable of achieving such a challenging task. A significant number of Ru coordination complexes have been identified as water oxidation catalysts (WOCs) and are among the best understood from a mechanistic perspective. In this review, we describe the catalytic performance of these complexes and focus our attention on the factors that influence their performance during catalysis, especially in cases where a detailed mechanistic investigation has been carried out. The collective information extracted from all the catalysts studied allows one to identify the key features that govern the complex chemistry associated with the catalytic water oxidation reaction. This includes the stability of trans-O-Ru-O groups, the change in coordination number from CN6 to CN7 at Ru high oxidation states, the ligand flexibility, the capacity to undergo intramolecular proton transfer, the bond strain, the axial ligand substitution, and supramolecular effects. Overall, combining all this information generates a coherent view of this complex chemistry.

Spectroscopy, Structure, Biomacromolecular Interactions, and Antiproliferation Activity of a Fe(II) Complex With DPA-Bpy as Pentadentate Ligand

An Fe(II) complex with DPA-Bpy (DPA-Bpy = N,N-bis(2-pyridinylmethyl)-2,20-bipyridine-6 -methanamine) as the ligand was synthesized and characterized to mimic bleomycin. The binding constants (K_b) of the complex with calf thymus DNA and human serum albumin (HSA) were quantitatively evaluated using fluorescence spectroscopy, with K_b as 5.53×10⁵ and 2.40×10⁴ M⁻¹, respectively; the number of the average binding site (n) is close to 1. The thermodynamic analyses suggested that the electrostatic interactions exist between the complex and DNA, and the hydrogen bonding and Van der Waals force exist for the complex and HSA. The Fe complex exhibits cleavage ability toward pBR322 DNA, and the crystal structure of the HSA Fe complex adduct at 2.4 Å resolution clearly shows that His288 serves as the axial ligand of the Fe center complexed with a pentadentate DPA-Bpy ligand. Furthermore, the cytotoxicity of the complex was evaluated against HeLa cells. Both the Fe complex and HSA Fe complex adduct show obvious effect on cell proliferation with an IC₅₀ of 1.18 and 0.82 μM, respectively; they induced cell apoptosis and arrested cell cycles at S phase. This study provides insight into the plausible mechanism underlying their metabolism and pharmacological activity.

A Calix[4]arene-Based Cyclic Dinuclear Ruthenium Complex for Light-Driven Catalytic Water Oxidation

A cyclic dinuclear ruthenium(bda) (bda: 2,2'-bipyridine-6,6'-dicarboxylate) complex equipped with oligo(ethylene glycol)-functionalized axial calix[4]arene ligands has been synthesized for homogenous catalytic water oxidation. This novel Ru(bda) macrocycle showed significantly increased catalytic activity in chemical and photocatalytic water oxidation compared to the archetype mononuclear reference [Ru(bda)(pic)2 ]. Kinetic investigations, including kinetic isotope effect studies, disclosed a unimolecular water nucleophilic attack mechanism of this novel dinuclear water oxidation catalyst (WOC) under the involvement of the second coordination sphere. Photocatalytic water oxidation with this cyclic dinuclear Ru complex using [Ru(bpy)3 ]Cl2 as a standard photosensitizer revealed a turnover frequency of 15.5 s-1 and a turnover number of 460. This so far highest photocatalytic performance reported for a Ru(bda) complex underlines the potential of this water-soluble WOC for artificial photosynthesis.

Synthesis, UV-visible spectroelectrochemistry and theoretical characterization of new polypyridyl Ru(II) complexes containing 2,4,6-tris(2-pyridyl)-1,3,5-triazine as precursors for water oxidation catalysts

In this work, we report the syntheses and physicochemical characterization of new chloro and aqua complexes of Ru(ii) with 2,4,6-tris(2-pyridyl)-1,3,5-triazine (tptz) and 2,2'-bipyridines substituted with donor and acceptor groups in the 4,4'-positions. The aqua complexes behave as precursors for water oxidation catalysts at pH = 1 using Ce(iv) as a sacrificial oxidant. Besides, the oxidized forms Ru(iv) and Ru(v) have been characterized at different pH values by electrochemistry, UV-Visible spectroscopy and spectroelectrochemistry. The reaction mechanisms were studied by combining mixing and stopped-flow experiments with spectrophotometric monitoring in the UV-visible region and all the rate constants were determined together with the corresponding TON and TOF values at pH = 1. Calculations based on Density Functional Theory (DFT and TD-DFT) were performed to support the experimental data.

Analysis of the Active Species Responsible for Water Oxidation Using a Pentanuclear Fe Complex

Water splitting with sunlight is today one of the most promising strategies that can be used to start the imperatively needed transition from fossil to solar fuels. To achieve this, one of the key reactions that need to be mastered is the electrocatalytic oxidation of water to dioxygen. Great developments have been achieved using transition metal complexes mainly based on Ru, but for technological applications it is highly desirable to be able to use earth-abundant transition metals. The intrinsic chemistry of first row transition metals and in particular the lability of their M-L bonds in water imposes serious challenges for the latter to work as real molecular catalysts. The present work addresses this issue based on a molecular pentanuclear Fe5 complex and describes the different protocols and tests that need to be carried out in order to identify the real active species, responsible for the generation of dioxygen.

Identification of novel potent and non-toxic anticancer, anti-angiogenic and antimetastatic rhenium complexes against colorectal carcinoma

Combination therapy targeting both tumor growth and vascularization is considered to be a cornerstone for colorectal carcinomas (CRC) treatment. However, the major obstacles of most clinical anticancer drugs are their weak selective activity towards cancer cells and inherent inner organs toxicity, accompanied with fast drug resistance development. In our effort to discover novel selective and non-toxic agents effective against CRC, we designed, synthesized and characterized a series of rhenium(I) tricarbonyl-based complexes with increased lipophilicity. Two of these novel compounds were discovered to possess remarkable anticancer, anti-angiogenic and antimetastatic activity in vivo (zebrafish-human HCT-116 xenograft model), being effective at very low doses (1-3 μM). At doses as high as 250 μM the complexes did not provoke toxicity issues encountered in clinical anticancer drugs (cardio-, hepato-, and myelotoxicity). In vivo assays showed that the two compounds exceed the anti-tumor and anti-angiogenic activity of clinical drugs cisplatin and sunitinib malate, and display a large therapeutic window.

Ruthenium-based catalysts for water oxidation: the key role of carboxyl groups as proton acceptors

In this work, the mechanism of water oxidation catalyzed by an Ru-based complex [Ru(L)]⁺ (L = 5,5-chelated 2-carboxy-phen, 2,2′;6′,2′′-terpyridine) was studied by density functional theory (DFT) calculations.

Ruthenium Nanoparticles for Catalytic Water Splitting

Both global warming and limited fossil resources make the transition from fossil to solar fuels an urgent matter. In this regard, the splitting of water activated by sunlight is a sustainable and carbon-free new energy conversion scheme able to produce efficient technological devices. The availability of appropriate catalysts is essential for the proper kinetics of the two key processes involved, namely, the oxygen evolution reaction (OER) and the hydrogen evolution reaction (HER). During the last decade, ruthenium nanoparticle derivatives have emerged as true potential substitutes for the state-of-the-art platinum and iridium oxide species for the HER and OER, respectively. Thus, after a summary of the most common methods for catalyst benchmarking, this review covers the most significant developments of ruthenium-based nanoparticles used as catalysts for the water-splitting process. Furthermore, the key factors that govern the catalytic performance of these nanocatalysts are discussed in view of future research directions.

Clostridium perfringens Epsilon Toxin Compromises the Blood-Brain Barrier in a Humanized Zebrafish Model

Clostridium perfringens epsilon toxin (ETX) is hypothesized to mediate blood-brain barrier (BBB) permeability by binding to the myelin and lymphocyte protein (MAL) on the luminal surface of endothelial cells (ECs). However, the kinetics of this interaction and a general understanding of ETX's behavior in a live organism have yet to be appreciated. Here we investigate ETX binding and BBB breakdown in living Danio rerio (zebrafish). Wild-type zebrafish ECs do not bind ETX. When zebrafish ECs are engineered to express human MAL (hMAL), proETX binding occurs in a time-dependent manner. Injection of activated toxin in hMAL zebrafish initiates BBB leakage, hMAL downregulation, blood vessel stenosis, perivascular edema, and blood stasis. We propose a kinetic model of MAL-dependent ETX binding and neurovascular pathology. By generating a humanized zebrafish BBB model, this study contributes to our understanding of ETX-induced BBB permeability and strengthens the proposal that MAL is the ETX receptor.

Kinetics and mechanisms of catalytic water oxidation

The kinetics and mechanisms of thermal and photochemical oxidation of water with homogeneous and heterogeneous catalysts, including conversion from homogeneous to heterogeneous catalysts in the course of water oxidation, are discussed in this review article. Molecular and homogeneous catalysts have the advantage to clarify the catalytic mechanisms by detecting active intermediates in catalytic water oxidation. On the other hand, heterogeneous nanoparticle catalysts have advantages for practical applications due to high catalytic activity, robustness and easier separation of catalysts by filtration as compared with molecular homogeneous precursors. Ligand oxidation of homogeneous catalysts sometimes results in the dissociation of ligands to form nanoparticles, which act as much more efficient catalysts for water oxidation. Since it is quite difficult to identify active intermediates on the heterogeneous catalyst surface, the mechanism of water oxidation has hardly been clarified under heterogeneous catalytic conditions. This review focuses on the kinetics and mechanisms of catalytic water oxidation with homogeneous catalysts, which may be converted to heterogeneous nanoparticle catalysts depending on various reaction conditions.

cis-Oxoruthenium complexes supported by chiral tetradentate amine (N4) ligands for hydrocarbon oxidations

We report the first examples of ruthenium complexes cis-[(N₄)Ru^IIICl₂]⁺ and cis-[(N₄)Ru^II(OH₂)₂]²⁺ supported by chiral tetradentate amine ligands (N₄), together with a high-valent cis-dioxo complex cis-[(N₄)Ru^VI(O)₂]²⁺ supported by the chiral N₄ ligand mcp (mcp = N,N'-dimethyl-N,N'-bis(pyridin-2-ylmethyl)cyclohexane-1,2-diamine). The X-ray crystal structures of cis-[(mcp)Ru^IIICl₂](ClO₄) (1a), cis-[(Me₂mcp)Ru^IIICl₂]ClO₄ (2a) and cis-[(pdp)Ru^IIICl₂](ClO₄) (3a) (Me₂mcp = N,N'-dimethyl-N,N'-bis((6-methylpyridin-2-yl)methyl)cyclohexane-1,2-diamine, pdp = 1,1'-bis(pyridin-2-ylmethyl)-2,2'-bipyrrolidine)) show that the ligands coordinate to the ruthenium centre in a cis-α configuration. In aqueous solutions, proton-coupled electron-transfer redox couples were observed for cis-[(mcp)Ru^III(O₂CCF₃)₂]ClO₄ (1b) and cis-[(pdp)Ru^III(O₃SCF₃)₂]CF₃SO₃ (3c'). Electrochemical analyses showed that the chemically/electrochemically generated cis-[(mcp)Ru^VI(O)₂]²⁺ and cis-[(pdp)Ru^VI(O)₂]²⁺ complexes are strong oxidants with E° = 1.11-1.13 V vs. SCE (at pH 1) and strong H-atom abstractors with D_O-H = 90.1-90.8 kcal mol^-1. The reaction of 1b or its (R,R)-mcp counterpart with excess (NH₄)₂[Ce^IV(NO₃)₆] (CAN) in aqueous medium afforded cis-[(mcp)Ru^VI(O)₂](ClO₄)₂ (1e) or cis-[((R,R)-mcp)Ru^VI(O)₂](ClO₄)₂ (1e*), respectively, a strong oxidant with E(Ru^VI/V) = 0.78 V (vs. Ag/AgNO₃) in acetonitrile solution. Complex 1e oxidized various hydrocarbons, including cyclohexane, in acetonitrile at room temperature, affording alcohols and/or ketones in up to 66% yield. Stoichiometric oxidations of alkenes by 1e or 1e* in ^t BuOH/H₂O (5 : 1 v/v) afforded diols and aldehydes in combined yields of up to 98%, with moderate enantioselectivity obtained for the reaction using 1e*. The cis-[(pdp)Ru^II(OH₂)₂]²⁺ (3c)-catalysed oxidation of saturated C-H bonds, including those of ethane and propane, with CAN as terminal oxidant was also demonstrated.

Electrochemical Formation of FeV (O) and Mechanism of Its Reaction with Water During O-O Bond Formation

A detailed electrochemical investigation of a series of iron complexes (biuret-modified tetraamido iron macrocycles Fe^III -bTAML), including the first electrochemical generation of Fe^V (O), and demonstration of their efficacy as homogeneous catalysts for electrochemical water oxidation (WO) in aqueous medium are reported. Spectroelectrochemical and mass spectral studies indicated Fe^V (O) as the active oxidant, formed due to two redox transitions, which were assigned as Fe^IV (O)/Fe^III (OH₂ ) and Fe^V (O)/Fe^IV (O). The spectral properties of both of these high-valent iron oxo species perfectly match those of their chemically synthesised versions, which were thoroughly characterised by several spectroscopic techniques. The O-O bond-formation step occurs by nucleophilic attack of H₂ O on Fe^V (O). A kinetic isotope effect of 3.2 indicates an atom-proton transfer (APT) mechanism. The reaction of chemically synthesised Fe^V (O) in CH₃ CN and water was directly probed by electrochemistry and was found to be first-order in water. The pK_a value of the buffer base plays a critical role in the rate-determining step by increasing the reaction rate several-fold. The electronic effect on redox potential, WO rates, and onset overpotential was studied by employing a series of iron complexes. The catalytic activity was enhanced by the presence of electron-withdrawing groups on the bTAML framework. Changing the substituents from OMe to NO₂ resulted in an eightfold increase in reaction rate, while the overpotential increased threefold.

The effect of the trans axial ligand of cobalt corroles on water oxidation activity in neutral aqueous solutions

Co corroles containing electron-donating trans axial ligands are more active than those containing electron-withdrawing trans axial ligands in catalyzing water oxidation.

How to make an efficient and robust molecular catalyst for water oxidation

The key factors to design an efficient and rugged molecular water oxidation catalyst (Mol-WOC) are reviewed and discussed.

Effects of Methyl Substitution in Ruthenium Tris(2-pyridylmethyl)amine Photocaging Groups for Nitriles

Four complexes of the general formula [Ru(L)(CH3CN)2](PF6)2, [L = TPA (5), MeTPA (6), Me2TPA (7), and Me3TPA (8)] [TPA = tris[(pyridin-2-yl)methyl]amine, where methyl groups were introduced consecutively onto the 6-position of py donors of TPA, were prepared and characterized by various spectroscopic techniques and mass spectrometry. While 5 and 8 were isolated as single stereoisomers, 6 and 7 were isolated as mixtures of stereoisomers in 2:1 and 1.5:1 ratios, respectively. Steric effects on ground state stability and thermal and photochemical reactivities were studied for all four complexes using (1)H NMR and electronic absorption spectroscopies and computational studies. These studies confirmed that the addition of steric bulk accelerates photochemical and thermal nitrile release.

Spectroscopic, Electrochemical and Computational Characterisation of Ru Species Involved in Catalytic Water Oxidation: Evidence for a [Ru(V) (O)(Py2 (Me) tacn)] Intermediate

A new family of ruthenium complexes based on the N-pentadentate ligand Py2 (Me) tacn (N-methyl-N',N''-bis(2-picolyl)-1,4,7-triazacyclononane) has been synthesised and its catalytic activity has been studied in the water-oxidation (WO) reaction. We have used chemical oxidants (ceric ammonium nitrate and NaIO4 ) to generate the WO intermediates [Ru(II) (OH2 )(Py2 (Me) tacn)](2+) , [Ru(III) (OH2 )(Py2 (Me) tacn)](3+) , [Ru(III) (OH)(Py2 (Me) tacn)](2+) and [Ru(IV) (O)(Py2 (Me) tacn)](2+) , which have been characterised spectroscopically. Their relative redox and pH stability in water has been studied by using UV/Vis and NMR spectroscopies, HRMS and spectroelectrochemistry. [Ru(IV) (O)(Py2 (Me) tacn)](2+) has a long half-life (>48 h) in water. The catalytic cycle of WO has been elucidated by using kinetic, spectroscopic, (18) O-labelling and theoretical studies, and the conclusion is that the rate-determining step is a single-site water nucleophilic attack on a metal-oxo species. Moreover, [Ru(IV) (O)(Py2 (Me) tacn)](2+) is proposed to be the resting state under catalytic conditions. By monitoring Ce(IV) consumption, we found that the O2 evolution rate is redox-controlled and independent of the initial concentration of Ce(IV) . Based on these facts, we propose herein that [Ru(IV) (O)(Py2 (Me) tacn)](2+) is oxidised to [Ru(V) (O)(Py2 (Me) tacn)](2+) prior to attack by a water molecule to give [Ru(III) (OOH)(Py2 (Me) tacn)](2+) . Finally, it is shown that the difference in WO reactivity between the homologous iron and ruthenium [M(OH2 )(Py2 (Me) tacn)](2+) (M=Ru, Fe) complexes is due to the difference in the redox stability of the key M(V) (O) intermediate. These results contribute to a better understanding of the WO mechanism and the differences between iron and ruthenium complexes in WO reactions.

Efficient water oxidation with electromodified Langmuir–Blodgett films of procatalytic [CoIII(N2O3)] metallosurfactants on electrodes

Electromodified Langmuir–Blodgett films of a cobalt-based metallosurfactant support water oxidation at turnover numbers of up to 54 000 h⁻¹.

[RuV(NCN-Me)(bpy)(O)]3+ mediated efficient photo-driven water oxidation

The complex [Ru(NCN-Me)(bpy)H₂O](PF₆)₂ acts as an active catalyst for the photo-driven oxidation of water, when employed with [Ru(bpy)₃]²⁺ as photosensitizer and Na₂S₂O₈ as sacrificial electron acceptor at pH 6.5 phosphate buffer, with a TON of 130.

Incorporation of a ruthenium–bis(pyridine)pyrazolate (Ru–bpp) water oxidation catalyst in a hexametallic macrocycle

New terpyridine-functionalised analogues of the in,in-[{Ru^II(trpy)}₂(μ-bpp)(H₂O)₂]³⁺ water oxidation catalyst (bpp = bis-(2-pyridyl)pyrazolate) have been synthesised and used to create a hexametallic {Fe₂Ru₄} macrocycle.

Intramolecular Proton Transfer Boosts Water Oxidation Catalyzed by a Ru Complex

We introduce a new family of complexes with the general formula [Ru(n)(tda)(py)2](m+) (n = 2, m = 0, 1; n = 3, m = 1, 2(+); n = 4, m = 2, 3(2+)), with tda(2-) being [2,2':6',2″-terpyridine]-6,6″-dicarboxylate, including complex [Ru(IV)(OH)(tda-κ-N(3)O)(py)2](+), 4H(+), which we find to be an impressive water oxidation catalyst, formed by hydroxo coordination to 3(2+) under basic conditions. The complexes are synthesized, isolated, and thoroughly characterized by analytical, spectroscopic (UV-vis, nuclear magnetic resonance, electron paramagnetic resonance), computational, and electrochemical techniques (cyclic voltammetry, differential pulse voltammetry, coulometry), including solid-state monocrystal X-ray diffraction analysis. In oxidation state IV, the Ru center is seven-coordinated and diamagnetic, whereas in oxidation state II, the complex has an unbonded dangling carboxylate and is six-coordinated while still diamagnetic. With oxidation state III, the coordination number is halfway between the coordination of oxidation states II and IV. Species generated in situ have also been characterized by spectroscopic, computational, and electrochemical techniques, together with the related species derived from a different degree of protonation and oxidation states. 4H(+) can be generated potentiometrically, or voltammetrically, from 3(2+), and both coexist in solution. While complex 3(2+) is not catalytically active, the catalytic performance of complex 4H(+) is characterized by the foot of the wave analysis, giving an impressive turnover frequency record of 8000 s(-1) at pH 7.0 and 50 000 s(-1) at pH 10.0. Density functional theory calculations provide a complete description of the water oxidation catalytic cycle of 4H(+), manifesting the key functional role of the dangling carboxylate in lowering the activation free energies that lead to O-O bond formation.

Solid-phase synthesis as a platform for the discovery of new ruthenium complexes for efficient release of photocaged ligands with visible light

Ruthenium-based photocaging groups have important applications as biological tools and show great potential as therapeutics. A method was developed to rapidly synthesize, screen, and identify ruthenium-based caging groups that release nitriles upon irradiation with visible light. A diverse library of tetra- and pentadentate ligands was synthesized on polystyrene resin. Ruthenium complexes of the general formula [Ru(L)(MeCN)n](m+) (n = 1-3, m = 1-2) were generated from these ligands on solid phase and then cleaved from resin for photochemical analysis. Data indicate a wide range of spectral tuning and reactivity with visible light. Three complexes that showed strong absorbance in the visible range were synthesized by solution phase for comparison. Photochemical behavior of solution- and solid-phase complexes was in good agreement, confirming that the library approach is useful in identifying candidates with desired photoreactivity in short order, avoiding time-consuming chromatography and compound purification.

Ruthenium catalysts for water oxidation involving tetradentate polypyridine-type ligands

A series of Ru^II complexes that behave as water oxidation catalysts were prepared involving a tetradentate equatorial ligand and two 4-substituted pyridines as the axial ligands. Two of these complexes were derived from 2,9-di-(pyrid-2′-yl)-1,10-phenanthroline (dpp) and examine the effect of incorporating electron-donating amino and bulky t-butyl groups on catalytic activity. A third complex replaced the two distal pyridines with N-methylimidazoles that are more electron-donating than the pyridines of dpp and potentially stabilize higher oxidation states of the metal. The tetradentate ligand 2-(pyrid-2′-yl)-6-(1′′,10′′-phenanthrol-2′′-yl)pyridine (bpy–phen), possessing a bonding cavity similar to dpp, was also prepared. The Ru^II complex of this ligand does not have two rotatable pyridines in the equatorial plane and thus shows different flexibility from the [Ru(dpp)] complexes. All the complexes showed activity towards water oxidation. Investigation of their catalytic behavior and electrochemical properties suggests that they may follow the same catalytic pathway as the prototype [Ru(dpp)pic₂]²⁺ involving a seven-coordinated [Ru^IV(O)] intermediate. The influence of coordination geometry on catalytic performance is analyzed and discussed.

Computational electrochemistry: prediction of liquid-phase reduction potentials

This article reviews recent developments and applications in the area of computational electrochemistry. Our focus is on predicting the reduction potentials of electron transfer and other electrochemical reactions and half-reactions in both aqueous and nonaqueous solutions. Topics covered include various computational protocols that combine quantum mechanical electronic structure methods (such as density functional theory) with implicit-solvent models, explicit-solvent protocols that employ Monte Carlo or molecular dynamics simulations (for example, Car-Parrinello molecular dynamics using the grand canonical ensemble formalism), and the Marcus theory of electronic charge transfer. We also review computational approaches based on empirical relationships between molecular and electronic structure and electron transfer reactivity. The scope of the implicit-solvent protocols is emphasized, and the present status of the theory and future directions are outlined.

Ruthenium tris(2-pyridylmethyl)amine as an effective photocaging group for nitriles

Ruthenium(II) tris(2-pyridylmethyl)amine (TPA) is an effective caging group for nitriles that provides high levels of control over the enzyme activity with light. Two caged nitriles were prepared, [Ru(TPA)(MeCN)₂](PF₆)₂ (1) and [Ru(TPA)(3)₂](PF₆)₂ (2), where 3 is the cathepsin K inhibitor Cbz-Leu-NHCH₂CN, and characterized by various spectroscopic techniques and mass spectrometry. Both 1 and 2 show the release of a single nitrile within 20 min of irradiation with 365 nm light. Complex 2 acts as a potent, photoactivated inhibitor of human cathepsin K. IC₅₀ values were determined for 2 and 3. Enzyme inhibition for 2 was enhanced by a factor of 89 upon exposure to light, with IC₅₀ values of 63 nM (light) and 5.6 μM (dark).

The photochemical release of nitriles from the caging fragment ruthenium tris(2-pyridylmethyl)amine (TPA) was studied. Caged complexes of the general formula [Ru(TPA)(RCN)₂]²⁺ are stable in the dark but release a single nitrile upon irradiation with 365 nm light. Photoactivated inhibition of cathepsin K was demonstrated with a caged inhibitor complex.

Molecular water oxidation mechanisms followed by transition metals: state of the art

One clean alternative to fossil fuels would be to split water using sunlight. However, to achieve this goal, researchers still need to fully understand and control several key chemical reactions. One of them is the catalytic oxidation of water to molecular oxygen, which also occurs at the oxygen evolving center of photosystem II in green plants and algae. Despite its importance for biology and renewable energy, the mechanism of this reaction is not fully understood. Transition metal water oxidation catalysts in homogeneous media offer a superb platform for researchers to investigate and extract the crucial information to describe the different steps involved in this complex reaction accurately. The mechanistic information extracted at a molecular level allows researchers to understand both the factors that govern this reaction and the ones that derail the system to cause decomposition. As a result, rugged and efficient water oxidation catalysts with potential technological applications can be developed. In this Account, we discuss the current mechanistic understanding of the water oxidation reaction catalyzed by transition metals in the homogeneous phase, based on work developed in our laboratories and complemented by research from other groups. Rather than reviewing all of the catalysts described to date, we focus systematically on the several key elements and their rationale from molecules studied in homogeneous media. We organize these catalysts based on how the crucial oxygen-oxygen bond step takes place, whether via a water nucleophilic attack or via the interaction of two M-O units, rather than based on the nuclearity of the water oxidation catalysts. Furthermore we have used DFT methodology to characterize key intermediates and transition states. The combination of both theory and experiments has allowed us to get a complete view of the water oxidation cycle for the different catalysts studied. Finally, we also describe the various deactivation pathways for these catalysts.