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Sánchez-Fernández R, Obregon-Gomez I, Sarmiento A, Vázquez ME, Pazos E. Luminescent lanthanide metallopeptides for biomolecule sensing and cellular imaging. Chem Commun (Camb) 2024; 60:12650-12661. [PMID: 39327864 PMCID: PMC11427887 DOI: 10.1039/d4cc03205e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2024] [Accepted: 09/19/2024] [Indexed: 09/28/2024]
Abstract
Lanthanide ions display unique luminescent properties that make them particularly attractive for the development of bioprobes, including long-lived excited states that allow the implementation of time-gated experiments and the elimination of background fluorescence associated with biological media, as well as narrow emission bands in comparison with typical organic fluorophores, which allow ratiometric and multiplex assays. These luminescent complexes can be combined with peptide ligands to endow them with additional targeting, responsiveness, and selectivity, thus multiplying the opportunities for creative probe design. In this feature article we will present some of the main strategies that researchers have used to develop lanthanide metallopeptide probes for the detection of proteins and nucleic acids, as well as for monitoring enzymatic activity and cellular imaging.
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Affiliation(s)
- Rosalía Sánchez-Fernández
- CICA - Centro Interdisciplinar de Química e Bioloxía and Departamento de Química, Facultade de Ciencias, Universidade da Coruña, 15071 A Coruña, Spain.
| | - Ines Obregon-Gomez
- CICA - Centro Interdisciplinar de Química e Bioloxía and Departamento de Química, Facultade de Ciencias, Universidade da Coruña, 15071 A Coruña, Spain.
| | - Axel Sarmiento
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Spain
| | - M Eugenio Vázquez
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Spain
| | - Elena Pazos
- CICA - Centro Interdisciplinar de Química e Bioloxía and Departamento de Química, Facultade de Ciencias, Universidade da Coruña, 15071 A Coruña, Spain.
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Laporte F, Chenavier Y, Botz A, Gateau C, Lebrun C, Hostachy S, Vidaud C, Delangle P. A Simple Fluorescence Affinity Assay to Decipher Uranyl-Binding to Native Proteins. Angew Chem Int Ed Engl 2022; 61:e202203198. [PMID: 35466512 PMCID: PMC9322271 DOI: 10.1002/anie.202203198] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2022] [Indexed: 11/29/2022]
Abstract
Determining the affinity of proteins for uranyl is key to understand the toxicity of this cation and to further develop decorporation strategies. However, usual techniques to achieve that goal often require specific equipment and expertise. Here, we propose a simple, efficient, fluorescence‐based method to assess the affinity of proteins and peptides for uranyl, at equilibrium and in buffered solution. We first designed and characterized an original uranyl‐binding fluorescent probe. We then built a reference scale for uranyl affinity in solution, relying on signal quenching of our fluorescent probe in presence of high‐affinity uranyl‐binding peptides. We finally validated our approach by re‐evaluating the uranyl‐binding affinity of four native proteins. We envision that this tool will facilitate the reliable and reproducible assessment of affinities of peptides and proteins for uranyl.
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Affiliation(s)
- Fanny Laporte
- IRIG, SyMMES, Université Grenoble Alpes, CEA, CNRS, Grenoble INP, 38000, Grenoble, France
| | - Yves Chenavier
- IRIG, SyMMES, Université Grenoble Alpes, CEA, CNRS, Grenoble INP, 38000, Grenoble, France
| | - Alexandra Botz
- IRIG, SyMMES, Université Grenoble Alpes, CEA, CNRS, Grenoble INP, 38000, Grenoble, France
| | - Christelle Gateau
- IRIG, SyMMES, Université Grenoble Alpes, CEA, CNRS, Grenoble INP, 38000, Grenoble, France
| | - Colette Lebrun
- IRIG, SyMMES, Université Grenoble Alpes, CEA, CNRS, Grenoble INP, 38000, Grenoble, France
| | - Sarah Hostachy
- IRIG, SyMMES, Université Grenoble Alpes, CEA, CNRS, Grenoble INP, 38000, Grenoble, France
| | - Claude Vidaud
- CEA, Fundamental Research Division, Biosciences and Biotechnologies Institute of Aix-Marseille, 30207, Bagnols sur Céze, France
| | - Pascale Delangle
- IRIG, SyMMES, Université Grenoble Alpes, CEA, CNRS, Grenoble INP, 38000, Grenoble, France
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Laporte F, Chenavier Y, Botz A, Gateau C, Lebrun C, Hostachy S, Vidaud C, Delangle P. A Simple Fluorescence Affinity Assay to Decipher Uranyl‐Binding to Native Proteins. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202203198] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Fanny Laporte
- IRIG, SyMMES Université Grenoble Alpes, CEA, CNRS, Grenoble INP 38000 Grenoble France
| | - Yves Chenavier
- IRIG, SyMMES Université Grenoble Alpes, CEA, CNRS, Grenoble INP 38000 Grenoble France
| | - Alexandra Botz
- IRIG, SyMMES Université Grenoble Alpes, CEA, CNRS, Grenoble INP 38000 Grenoble France
| | - Christelle Gateau
- IRIG, SyMMES Université Grenoble Alpes, CEA, CNRS, Grenoble INP 38000 Grenoble France
| | - Colette Lebrun
- IRIG, SyMMES Université Grenoble Alpes, CEA, CNRS, Grenoble INP 38000 Grenoble France
| | - Sarah Hostachy
- IRIG, SyMMES Université Grenoble Alpes, CEA, CNRS, Grenoble INP 38000 Grenoble France
| | - Claude Vidaud
- CEA, Fundamental Research Division Biosciences and Biotechnologies Institute of Aix-Marseille 30207 Bagnols sur Céze France
| | - Pascale Delangle
- IRIG, SyMMES Université Grenoble Alpes, CEA, CNRS, Grenoble INP 38000 Grenoble France
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Bao G, Wen S, Lin G, Yuan J, Lin J, Wong KL, Bünzli JCG, Jin D. Learning from lanthanide complexes: The development of dye-lanthanide nanoparticles and their biomedical applications. Coord Chem Rev 2021. [DOI: 10.1016/j.ccr.2020.213642] [Citation(s) in RCA: 38] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
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Scarpantonio L, Cotton S, Del Giorgio E, McCallum M, Hannon M, Pikramenou Z. A luminescent europium hairpin for DNA photosensing in the visible, based on trimetallic bis-intercalators. J Inorg Biochem 2020; 209:111119. [DOI: 10.1016/j.jinorgbio.2020.111119] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2020] [Revised: 05/01/2020] [Accepted: 05/16/2020] [Indexed: 01/15/2023]
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Deol KK, Muller G. Luminescent and Chiroptical Properties of 1 : 1 Eu (III) : Tetracycline Species Probed by Circularly Polarized Luminescence. Chempluschem 2020; 84:1796-1804. [PMID: 31943861 DOI: 10.1002/cplu.201900627] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2019] [Revised: 11/05/2019] [Indexed: 11/08/2022]
Abstract
This study investigates the significantly different luminescent and chiroptical properties of tetracycline (TC) when coordinated to Eu(III). The approach involves understanding the 1) speciation of TC and 2) conformation and species formed between Eu(III) and TC in a ratio of 1 : 1 in a dimethylformamide (DMF) solution and as a function of the pH value. By identifying the conformational changes of the various 1 : 1 Eu(III) : TC species, the results from this study explain information on the local microenvironment about the Eu(III) metal center. In particular, 5 D0 ←7 F0 Eu(III) laser excitation spectroscopy was employed to distinguish the different types of species found in solution in order to understand the interaction between Eu(III) and TC. On the other hand, circularly polarized luminescence (CPL) spectroscopy was used to understand the structural changes within the 1 : 1 Eu(III) : TC complex that could be related to the chirality of the Eu(III)-containing species. The CPL spectrum serves as a "fingerprint" to indicate the conformational changes within the 1 : 1 Eu(III) : TC complex as a result of the chiroptical signal arising from the various Eu(III) : TC species.
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Affiliation(s)
- Kirandeep K Deol
- Department of Chemistry, San José State University, One Washington Square, San José, CA 95192-0101, USA
| | - Gilles Muller
- Department of Chemistry, San José State University, One Washington Square, San José, CA 95192-0101, USA
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Thiazonaphthalimide derivatives: Synthesis and interaction with DNA. Tetrahedron Lett 2018. [DOI: 10.1016/j.tetlet.2018.05.052] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Shuvaev S, Starck M, Parker D. Responsive, Water-Soluble Europium(III) Luminescent Probes. Chemistry 2017; 23:9974-9989. [PMID: 28471496 DOI: 10.1002/chem.201700567] [Citation(s) in RCA: 96] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2017] [Indexed: 12/31/2022]
Abstract
The design principles, mechanism of action and performance of europium(III) complexes that serve as strongly emissive and responsive molecular probes in water are critically discussed. Examples of systems designed to assess pH, selected metal ions and anions, including chiral species, as well as selected small molecules and biopolymers are considered, and prospects evaluated for improved performance in more complex biological media such as in bio-fluids and within living cells. Modulation of the emission spectral form, lifetime and degree of circular polarisation can be used to quantify the spectral response and permit calibration.
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Affiliation(s)
- Sergey Shuvaev
- Department of Chemistry, Durham University, South Road, Durham, DH1 3LE, UK
| | - Matthieu Starck
- Department of Chemistry, Durham University, South Road, Durham, DH1 3LE, UK
| | - David Parker
- Department of Chemistry, Durham University, South Road, Durham, DH1 3LE, UK
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Raibaut L, Vasseur W, Shimberg GD, Saint-Pierre C, Ravanat JL, Michel SLJ, Sénèque O. Design of a synthetic luminescent probe from a biomolecule binding domain: selective detection of AU-rich mRNA sequences. Chem Sci 2016; 8:1658-1664. [PMID: 28451295 PMCID: PMC5364516 DOI: 10.1039/c6sc04086a] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2016] [Accepted: 11/02/2016] [Indexed: 12/12/2022] Open
Abstract
We report the design of a luminescent sensor based upon the zinc finger protein TIS11d, that allows for the selective time-resolved detection of the UUAUUUAUU sequence of the 3′-untranslated region of messenger RNA.
We report the design of a luminescent sensor based upon the zinc finger (ZF) protein TIS11d, that allows for the selective time-resolved detection of the UUAUUUAUU sequence of the 3′-untranslated region of messenger RNA. This sensor is composed of the tandem ZF RNA binding domain of TIS11d functionalized with a luminescent Tb3+ complex on one of the ZFs and a sensitizing antenna on the other. This work provides the proof of principle that an RNA binding protein can be re-engineered as an RNA sensor and, more generally, that tunable synthetic luminescent probes for biomolecules can be obtained by modifying biomolecule-binding domains.
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Affiliation(s)
- Laurent Raibaut
- Univ. Grenoble Alpes , LCBM/PMB , F-38000 Grenoble , France.,CNRS , LCBM/PMB , UMR 5249 , F-38000 Grenoble , France.,CEA , BIG-CBM , PMB , F-38000 Grenoble , France .
| | - William Vasseur
- Univ. Grenoble Alpes , LCBM/PMB , F-38000 Grenoble , France.,CNRS , LCBM/PMB , UMR 5249 , F-38000 Grenoble , France.,CEA , BIG-CBM , PMB , F-38000 Grenoble , France .
| | - Geoffrey D Shimberg
- Department of Pharmaceutical Sciences , School of Pharmacy , University of Maryland , Baltimore , Maryland 21201-1180 , USA .
| | - Christine Saint-Pierre
- Univ. Grenoble Alpes , INAC-SyMMES , F-38000 Grenoble , France.,CEA , INAC-SyMMES , F-38000 Grenoble , France
| | - Jean-Luc Ravanat
- Univ. Grenoble Alpes , INAC-SyMMES , F-38000 Grenoble , France.,CEA , INAC-SyMMES , F-38000 Grenoble , France
| | - Sarah L J Michel
- Department of Pharmaceutical Sciences , School of Pharmacy , University of Maryland , Baltimore , Maryland 21201-1180 , USA .
| | - Olivier Sénèque
- Univ. Grenoble Alpes , LCBM/PMB , F-38000 Grenoble , France.,CNRS , LCBM/PMB , UMR 5249 , F-38000 Grenoble , France.,CEA , BIG-CBM , PMB , F-38000 Grenoble , France .
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Zhao C, Sun Y, Ren J, Qu X. Recent progress in lanthanide complexes for DNA sensing and targeting specific DNA structures. Inorganica Chim Acta 2016. [DOI: 10.1016/j.ica.2016.04.014] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
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Hyper-stable organo-Eu(III) luminophore under high temperature for photo-industrial application. Sci Rep 2016; 6:24458. [PMID: 27074731 PMCID: PMC4830997 DOI: 10.1038/srep24458] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2015] [Accepted: 03/29/2016] [Indexed: 11/08/2022] Open
Abstract
Novel organo-Eu(III) luminophores, Eu(hfa)x(CPO)y and Eu(hfa)x(TCPO)y (hfa: hexafluoroacetylacetonate, CPO: 4-carboxyphenyl diphenyl phosphine oxide, TCPO: 4,4',4″-tricarboxyphenyl phosphine oxide), were synthesized by the complexation of Eu(III) ions with hfa moieties and CPO or TCPO ligands. The thermal and luminescent stabilities of the luminophores are extremely high. The decomposition temperature of Eu(hfa)x(CPO)y and Eu(hfa)x(TCPO)y were determined as 200 and 450 °C, respectively. The luminescence of Eu(hfa)x(TCPO)y under UV light irradiation was observed even at a high temperature, 400 °C. The luminescent properties of Eu(hfa)x(CPO)y and Eu(hfa)x(TCPO)y were estimated from emission spectra, quantum yields and lifetime measurements. The energy transfer efficiency from hfa moieties to Eu(III) ions in Eu(hfa)x(TCPO)y was 59%. The photosensitized luminescence of hyper-stable Eu(hfa)x(TCPO)y at 400 °C is demonstrated for future photonic applications.
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Penas C, Mascareñas JL, Vázquez ME. Coupling the folding of a β-hairpin with chelation-enhanced luminescence of Tb(III) and Eu(III) ions for specific sensing of a viral RNA. Chem Sci 2016; 2016:2674-2678. [PMID: 27293537 PMCID: PMC4898589 DOI: 10.1039/c5sc04501k] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2015] [Accepted: 01/10/2016] [Indexed: 12/25/2022] Open
Abstract
Rational modification of a natural RNA-binding peptide with a lanthanide EDTA chelator, and a phenanthroline ligand yields a highly selective luminescent sensor. The sensing mechanism relies on the RNA-triggered folding of the peptide into a β-hairpin, which promotes the coordination of the phenanthroline sensitizer, and the efficient sensitization of complexed lanthanide ions.
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Affiliation(s)
- Cristina Penas
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS)
, Departamento de Química Orgánica
, Universidade de Santiago de Compostela
,
15782 Santiago de Compostela
, Spain
.
;
| | - José L. Mascareñas
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS)
, Departamento de Química Orgánica
, Universidade de Santiago de Compostela
,
15782 Santiago de Compostela
, Spain
.
;
| | - M. Eugenio Vázquez
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS)
, Departamento de Química Orgánica
, Universidade de Santiago de Compostela
,
15782 Santiago de Compostela
, Spain
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