1
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Zhang G, See NW, Wimmer N, Godinez MJ, Cameron SA, Furneaux RH, Ferro V. Site-Selective Photobromination of O-Acetylated Carbohydrates in Benzotrifluoride. Org Lett 2024. [PMID: 38975898 DOI: 10.1021/acs.orglett.4c01898] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/09/2024]
Abstract
Ferrier photobromination enables direct synthetic access to valuable 5-C-bromosugars but has limitations that restrict its broader use. The reaction is typically conducted in CCl4 heated at reflux with irradiation by broad spectrum, energy-inefficient heat lamps. Herein, we demonstrate that the reaction proceeds rapidly and efficiently with PhCF3 as a safe and environmentally benign alternative to CCl4 at mild temperatures (≤40 °C) inside a compact photoreactor fitted with purple light-emitting diodes (LEDs).
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Affiliation(s)
- Guoqing Zhang
- School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, Queensland 4072, Australia
| | - Nicholas W See
- School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, Queensland 4072, Australia
- Ferrier Research Institute, Victoria University of Wellington, 69 Gracefield Road, Lower Hutt 5040, New Zealand
| | - Norbert Wimmer
- School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, Queensland 4072, Australia
| | - Michael J Godinez
- Ferrier Research Institute, Victoria University of Wellington, 69 Gracefield Road, Lower Hutt 5040, New Zealand
| | - Scott A Cameron
- Ferrier Research Institute, Victoria University of Wellington, 69 Gracefield Road, Lower Hutt 5040, New Zealand
| | - Richard H Furneaux
- Ferrier Research Institute, Victoria University of Wellington, 69 Gracefield Road, Lower Hutt 5040, New Zealand
| | - Vito Ferro
- School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, Queensland 4072, Australia
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2
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Abstract
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Fluorinated
carbohydrates have found many applications in the glycosciences.
Typically, these contain fluorination at a single position. There
are not many applications involving polyfluorinated carbohydrates,
here defined as monosaccharides in which more than one carbon has
at least one fluorine substituent directly attached to it, with the
notable exception of their use as mechanism-based inhibitors. The
increasing attention to carbohydrate physical properties, especially
around lipophilicity, has resulted in a surge of interest for this
class of compounds. This review covers the considerable body of work
toward the synthesis of polyfluorinated hexoses, pentoses, ketosugars,
and aminosugars including sialic acids and nucleosides. An overview
of the current state of the art of their glycosidation is also provided.
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Affiliation(s)
- Kler Huonnic
- School of Chemistry, University of Southampton, Highfield, Southampton, SO17 1BJ, U.K
| | - Bruno Linclau
- School of Chemistry, University of Southampton, Highfield, Southampton, SO17 1BJ, U.K.,Department of Organic and Macromolecular Chemistry, Ghent University, Campus Sterre, Krijgslaan 281-S4, Ghent, 9000, Belgium
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3
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Buisson P, Treuillet E, Schuler M, Lopin-Bon C. Multigram scale preparation of a semi-synthetic N-trifluoroacetyl protected chondroitin disaccharide building block: Towards the stereoselective synthesis of chondroitin sulfates disaccharides. Carbohydr Res 2022; 512:108514. [PMID: 35123175 DOI: 10.1016/j.carres.2022.108514] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2021] [Revised: 01/26/2022] [Accepted: 01/26/2022] [Indexed: 11/02/2022]
Abstract
The chemoselective N-trifluoroacetylation of a chondroitin disaccharide obtained from controlled acid hydrolysis of a commercially available polymeric chondroitin sulfate is reported for the first time. We also described the multi-gram scale synthesis of a donor block having a benzylidene moiety further used for the expeditious and stereocontrolled synthesis of glycosides fitted with various aglycons. Stereocontrolled β-glycosylation, sulfation and efficient N-TFA deprotection steps afforded the desired disaccharides in good yields.
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Affiliation(s)
- Pierre Buisson
- Institut de Chimie Organique et Analytique (ICOA), UMR 7311 CNRS et Université d'Orléans, BP 6759, 45067, Orléans cedex 02, France
| | - Elodie Treuillet
- Institut de Chimie Organique et Analytique (ICOA), UMR 7311 CNRS et Université d'Orléans, BP 6759, 45067, Orléans cedex 02, France
| | - Marie Schuler
- Institut de Chimie Organique et Analytique (ICOA), UMR 7311 CNRS et Université d'Orléans, BP 6759, 45067, Orléans cedex 02, France
| | - Chrystel Lopin-Bon
- Institut de Chimie Organique et Analytique (ICOA), UMR 7311 CNRS et Université d'Orléans, BP 6759, 45067, Orléans cedex 02, France.
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4
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Li M, Ding H, Yan N, Wang P, Song N, Sun Q, Li TT. Synthesis of Reverse Glycosyl Fluorides via Organophotocatalytic Decarboxylative Fluorination of Uronic Acids. Org Chem Front 2022. [DOI: 10.1039/d2qo00133k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
An efficient protocol for organophotocatalytic synthesis of reverse glycosyl fluorides (RGFs) is established relying on 9-mesityl-10-methyl-acridinium (Mes-Acr+)-mediated oxidative decarboxylative fluorination of uronic acids. Both pentofuranoid and hexopyranoid uronic acids are...
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5
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Zhang M, Chen HW, Liu QQ, Gao FT, Li YX, Hu XG, Yu CY. De Novo Synthesis of Orthogonally-Protected C2-Fluoro Digitoxoses and Cymaroses: Development and Application for the Synthesis of Fluorinated Digoxin. J Org Chem 2021; 87:1272-1284. [PMID: 34964642 DOI: 10.1021/acs.joc.1c02592] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Inspired by Roush's pioneering work on rare sugars, we have developed a scalable, stereoselective, de novo synthesis of orthogonally protected C2-fluoro digitoxose and cymarose, utilizing Sharpless kinetic resolution and organocatalytic fluorination as key steps. The utility of this strategy is demonstrated by the synthesis of a fluorinated analogue of digoxin, which indicates the fluorine on the sugar ring may have a significant impact on biological activity.
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Affiliation(s)
- Ming Zhang
- National Engineering Research Center for Carbohydrate Synthesis, Jiangxi Normal University, Nanchang 330022, China.,Beijing National Laboratory for Molecular Science (BNLMS), CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
| | - Hong-Wei Chen
- National Engineering Research Center for Carbohydrate Synthesis, Jiangxi Normal University, Nanchang 330022, China
| | - Qing-Quan Liu
- National Engineering Research Center for Carbohydrate Synthesis, Jiangxi Normal University, Nanchang 330022, China
| | - Feng-Teng Gao
- National Engineering Research Center for Carbohydrate Synthesis, Jiangxi Normal University, Nanchang 330022, China
| | - Yi-Xian Li
- Beijing National Laboratory for Molecular Science (BNLMS), CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
| | - Xiang-Guo Hu
- National Engineering Research Center for Carbohydrate Synthesis, Jiangxi Normal University, Nanchang 330022, China
| | - Chu-Yi Yu
- Beijing National Laboratory for Molecular Science (BNLMS), CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
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6
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Council CE, Kilpin KJ, Gusthart JS, Allman SA, Linclau B, Lee SS. Enzymatic glycosylation involving fluorinated carbohydrates. Org Biomol Chem 2021; 18:3423-3451. [PMID: 32319497 DOI: 10.1039/d0ob00436g] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
Fluorinated carbohydrates, where one (or more) fluorine atom(s) have been introduced into a carbohydrate structure, typically through deoxyfluorination chemistry, have a wide range of applications in the glycosciences. Fluorinated derivatives of galactose, glucose, N-acetylgalactosamine, N-acetylglucosamine, talose, fucose and sialic acid have been employed as either donor or acceptor substrates in glycosylation reactions. Fluorinated donors can be synthesised by synthetic methods or produced enzymatically from chemically fluorinated sugars. The latter process is mediated by enzymes such as kinases, phosphorylases and nucleotidyltransferases. Fluorinated donors produced by either method can subsequently be used in glycosylation reactions mediated by glycosyltransferases, or phosphorylases yielding fluorinated oligosaccharide or glycoconjugate products. Fluorinated acceptor substrates are typically synthesised chemically. Glycosyltransferases are most commonly used in conjunction with natural donors to further elaborate fluorinated acceptor substrates. Glycoside hydrolases are used with either fluorinated donors or acceptors. The activity of enzymes towards fluorinated sugars is often lower than towards the natural sugar substrates irrespective of donor or acceptor. This may be in part attributed to elimination of the contribution of the hydroxyl group to the binding of the substrate to enzymes. However, in many cases, enzymes still maintain a significant activity, and reactions may be optimised where necessary, enabling enzymes to be used more successfully in the production of fluorinated carbohydrates. This review describes the current state of the art regarding chemoenzymatic production of fluorinated carbohydrates, focusing specifically on examples of the enzymatic production of activated fluorinated donors and enzymatic glycosylation involving fluorinated sugars as either glycosyl donors or acceptors.
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Affiliation(s)
- Claire E Council
- School of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, UK.
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7
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Uhrig ML, Mora Flores EW, Postigo A. Approaches to the Synthesis of Perfluoroalkyl-Modified Carbohydrates and Derivatives: Thiosugars, Iminosugars, and Tetrahydro(thio)pyrans. Chemistry 2021; 27:7813-7825. [PMID: 33462910 DOI: 10.1002/chem.202005229] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2020] [Revised: 01/06/2021] [Indexed: 12/11/2022]
Abstract
Fluoroalkyl-substituted carbohydrates play relevant roles in diverse areas such as supramolecular chemistry, glycoconjugation, liquid crystals, and surfactants, with direct applications as wetting, antifreeze, and coating agents. In light of these promising applications, new methodologies for the late-stage incorporation of fluoroalkyl RF groups into carbohydrates and derivatives are herein presented as they are relevant to the synthetic carbohydrate community. Previously reviewed protocols for the installation of RF groups onto carbohydrates and derivatives will be succinctly summarized in the light of the new achievements. Fluoroalkyl-substituted iminosugars, on the other hand, are also interesting glycomimetic derivatives with prominent roles as glycosidases and glycosyltransferases inhibitors, as has recently been demonstrated. Also, they positively contribute to the study of sugar-protein interactions and enzyme mechanisms. New advances in the syntheses of fluoroalkyl-substituted iminosugars will also be presented here.
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Affiliation(s)
- María Laura Uhrig
- Departamento de Química Orgánica, Universidad de Buenos Aires, Facultad de Ciencias ExactasyNaturales, Pabellón 2, Ciudad Universitaria, C1428EG, Buenos Aires, Argentina.,Centro de Investigaciones en Hidratos de Carbono (CIHIDECAR), CONICET- Universidad de Buenos Aires, CP1428, Buenos Aires, Argentina
| | - Erwin W Mora Flores
- Departamento de Química Orgánica, Universidad de Buenos Aires, Facultad de Farmacia y Bioquímica, Junín 954, CP1113-, Buenos Aires, Argentina
| | - Al Postigo
- Departamento de Química Orgánica, Universidad de Buenos Aires, Facultad de Farmacia y Bioquímica, Junín 954, CP1113-, Buenos Aires, Argentina
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8
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Chen P, Wang P, Long Q, Ding H, Cheng G, Li T, Li M. Synthesis of Reverse Glycosyl Fluorides and Rare Glycosyl Fluorides Enabled by Radical Decarboxylative Fluorination of Uronic Acids. Org Lett 2020; 22:9325-9330. [PMID: 33226829 DOI: 10.1021/acs.orglett.0c03514] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
An efficient protocol for synthesizing reverse glycosyl fluorides is described, relying on silver-promoted decarboxylative fluorination of structurally diverse pentofuran- and hexopyranuronic acids under the mild reaction conditions. The potential applications of the reaction are further demonstrated by converting readily available d-uronic acid derivatives into uncommon d-/l-glycosyl fluorides through a C1-to-C5 switch strategy. The reaction mechanism is corroborated by 5-exo-trig radical cyclization of allyl α-d-C-glucopyranuronic acid triggered by decarboxylative fluorination.
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Affiliation(s)
- Pengwei Chen
- Key Laboratory of Marine Medicine, Chinese Ministry of Education, School of Medicine and Pharmacy, Ocean University of China, Qingdao 266003, China.,Hainan Key Laboratory for Research and Development of Natural Products from Li Folk Medicine, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou 571101, China
| | - Peng Wang
- Key Laboratory of Marine Medicine, Chinese Ministry of Education, School of Medicine and Pharmacy, Ocean University of China, Qingdao 266003, China
| | - Qing Long
- Key Laboratory of Marine Medicine, Chinese Ministry of Education, School of Medicine and Pharmacy, Ocean University of China, Qingdao 266003, China
| | - Han Ding
- Key Laboratory of Marine Medicine, Chinese Ministry of Education, School of Medicine and Pharmacy, Ocean University of China, Qingdao 266003, China
| | - Guoqiang Cheng
- Key Laboratory of Marine Medicine, Chinese Ministry of Education, School of Medicine and Pharmacy, Ocean University of China, Qingdao 266003, China
| | - Tiantian Li
- Key Laboratory of Marine Medicine, Chinese Ministry of Education, School of Medicine and Pharmacy, Ocean University of China, Qingdao 266003, China
| | - Ming Li
- Key Laboratory of Marine Medicine, Chinese Ministry of Education, School of Medicine and Pharmacy, Ocean University of China, Qingdao 266003, China.,Laboratory for Marine Drugs and Bioproducts, Pilot National Laboratory for Marine Science and Technology, Qingdao 266237, China.,Shandong Provincial Key Laboratory of Glycoscience and Glycotechnology, School of Medicine and Pharmacy, Ocean University of China, Qingdao 266003, China
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9
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Li W, Yu B. Temporary ether protecting groups at the anomeric center in complex carbohydrate synthesis. Adv Carbohydr Chem Biochem 2020; 77:1-69. [PMID: 33004110 DOI: 10.1016/bs.accb.2019.10.001] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
The synthesis of a carbohydrate building block usually starts with introduction of a temporary protecting group at the anomeric center and ends with its selective cleavage for further transformation. Thus, the choice of the anomeric temporary protecting group must be carefully considered because it should retain intact during the whole synthetic manipulation, and it should be chemoselectively removable without affecting other functional groups at a late stage in the synthesis. Etherate groups are the most widely used temporary protecting groups at the anomeric center, generally including allyl ethers, MP (p-methoxyphenyl) ethers, benzyl ethers, PMB (p-methoxybenzyl) eithers, and silyl ethers. This chapter provides a comprehensive review on their formation, cleavage, and applications in the synthesis of complex carbohydrates.
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Affiliation(s)
- Wei Li
- Department of Medicinal Chemistry, School of Pharmacy, China Pharmaceutical University, Nanjing, China.
| | - Biao Yu
- State Key Laboratory of Bio-organic and Natural Products Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai, China.
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10
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Zhou X, Ding H, Chen P, Liu L, Sun Q, Wang X, Wang P, Lv Z, Li M. Radical Dehydroxymethylative Fluorination of Carbohydrates and Divergent Transformations of the Resulting Reverse Glycosyl Fluorides. Angew Chem Int Ed Engl 2020; 59:4138-4144. [PMID: 31850616 DOI: 10.1002/anie.201914557] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2019] [Indexed: 12/22/2022]
Abstract
A mild and convenient method for the synthesis of reverse glycosyl fluorides (RGFs) has been developed that is based on the silver-promoted radical dehydroxymethylative fluorination of carbohydrates. A salient feature of the reaction is that furanoid and pyranoid carbohydrates furnish structurally diverse RGFs bearing a wide variety of functional groups in good to excellent yields. Intramolecular hydrogen atom transfer experiments revealed that the reaction involves an underexploited radical fluorination that proceeds via β-fragmentation of sugar-derived primary alkoxyl radicals. Structurally divergent RGFs were obtained by catalytic C-F bond activation, and our method thus offers a concise and efficient strategy for the synthesis of reverse glycosides by late-stage diversification of RGFs. The potential of this method is showcased by the preparation and diversification of sotagliflozin, leading to the discovery of a promising SGLT2 inhibitor candidate.
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Affiliation(s)
- Xin Zhou
- School of Medicine and Pharmacy, Key Laboratory of Marine Medicine, Chinese Ministry of Education, Ocean University of China, 5 Yushan Road, Qingdao, 266003, P. R. China
| | - Han Ding
- School of Medicine and Pharmacy, Key Laboratory of Marine Medicine, Chinese Ministry of Education, Ocean University of China, 5 Yushan Road, Qingdao, 266003, P. R. China
| | - Pengwei Chen
- School of Medicine and Pharmacy, Key Laboratory of Marine Medicine, Chinese Ministry of Education, Ocean University of China, 5 Yushan Road, Qingdao, 266003, P. R. China.,Hainan Key Laboratory for Research and Development of Natural Products from Li Folk Medicine, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, 571101, P. R. China
| | - Li Liu
- School of Medicine and Pharmacy, Key Laboratory of Marine Medicine, Chinese Ministry of Education, Ocean University of China, 5 Yushan Road, Qingdao, 266003, P. R. China
| | - Qikai Sun
- School of Medicine and Pharmacy, Key Laboratory of Marine Medicine, Chinese Ministry of Education, Ocean University of China, 5 Yushan Road, Qingdao, 266003, P. R. China
| | - Xianyang Wang
- School of Medicine and Pharmacy, Key Laboratory of Marine Medicine, Chinese Ministry of Education, Ocean University of China, 5 Yushan Road, Qingdao, 266003, P. R. China
| | - Peng Wang
- School of Medicine and Pharmacy, Key Laboratory of Marine Medicine, Chinese Ministry of Education, Ocean University of China, 5 Yushan Road, Qingdao, 266003, P. R. China
| | - Zhihua Lv
- School of Medicine and Pharmacy, Key Laboratory of Marine Medicine, Chinese Ministry of Education, Ocean University of China, 5 Yushan Road, Qingdao, 266003, P. R. China.,Laboratory for Marine Drugs and Bioproducts, Qingdao National Laboratory for Marine Science and Technology, Qingdao, 266237, P. R. China
| | - Ming Li
- School of Medicine and Pharmacy, Key Laboratory of Marine Medicine, Chinese Ministry of Education, Ocean University of China, 5 Yushan Road, Qingdao, 266003, P. R. China.,Laboratory for Marine Drugs and Bioproducts, Qingdao National Laboratory for Marine Science and Technology, Qingdao, 266237, P. R. China
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11
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Zhou X, Ding H, Chen P, Liu L, Sun Q, Wang X, Wang P, Lv Z, Li M. Radical Dehydroxymethylative Fluorination of Carbohydrates and Divergent Transformations of the Resulting Reverse Glycosyl Fluorides. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.201914557] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- Xin Zhou
- School of Medicine and Pharmacy Key Laboratory of Marine Medicine Chinese Ministry of Education Ocean University of China 5 Yushan Road Qingdao 266003 P. R. China
| | - Han Ding
- School of Medicine and Pharmacy Key Laboratory of Marine Medicine Chinese Ministry of Education Ocean University of China 5 Yushan Road Qingdao 266003 P. R. China
| | - Pengwei Chen
- School of Medicine and Pharmacy Key Laboratory of Marine Medicine Chinese Ministry of Education Ocean University of China 5 Yushan Road Qingdao 266003 P. R. China
- Hainan Key Laboratory for Research and Development of Natural Products from Li Folk Medicine Institute of Tropical Bioscience and Biotechnology Chinese Academy of Tropical Agricultural Sciences Haikou 571101 P. R. China
| | - Li Liu
- School of Medicine and Pharmacy Key Laboratory of Marine Medicine Chinese Ministry of Education Ocean University of China 5 Yushan Road Qingdao 266003 P. R. China
| | - Qikai Sun
- School of Medicine and Pharmacy Key Laboratory of Marine Medicine Chinese Ministry of Education Ocean University of China 5 Yushan Road Qingdao 266003 P. R. China
| | - Xianyang Wang
- School of Medicine and Pharmacy Key Laboratory of Marine Medicine Chinese Ministry of Education Ocean University of China 5 Yushan Road Qingdao 266003 P. R. China
| | - Peng Wang
- School of Medicine and Pharmacy Key Laboratory of Marine Medicine Chinese Ministry of Education Ocean University of China 5 Yushan Road Qingdao 266003 P. R. China
| | - Zhihua Lv
- School of Medicine and Pharmacy Key Laboratory of Marine Medicine Chinese Ministry of Education Ocean University of China 5 Yushan Road Qingdao 266003 P. R. China
- Laboratory for Marine Drugs and Bioproducts Qingdao National Laboratory for Marine Science and Technology Qingdao 266237 P. R. China
| | - Ming Li
- School of Medicine and Pharmacy Key Laboratory of Marine Medicine Chinese Ministry of Education Ocean University of China 5 Yushan Road Qingdao 266003 P. R. China
- Laboratory for Marine Drugs and Bioproducts Qingdao National Laboratory for Marine Science and Technology Qingdao 266237 P. R. China
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12
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Design, properties and applications of fluorinated and fluoroalkylated N-containing monosaccharides and their analogues. J Fluor Chem 2019. [DOI: 10.1016/j.jfluchem.2019.109364] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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13
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Peng R, VanNieuwenhze MS. Construction of the DEF–Benzoxocin Ring System of Nogalamycin and Menogaril via a Reductive Heck Cyclization. J Org Chem 2019; 84:173-180. [DOI: 10.1021/acs.joc.8b02575] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Ruogu Peng
- Department of Chemistry, Indiana University-Bloomington 800 East Kirkwood Avenue, Bloomington, Indiana 47405-7102, United States
| | - Michael S. VanNieuwenhze
- Department of Chemistry, Indiana University-Bloomington 800 East Kirkwood Avenue, Bloomington, Indiana 47405-7102, United States
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14
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Uhrig ML, Lantaño B, Postigo A. Synthetic strategies for fluorination of carbohydrates. Org Biomol Chem 2019; 17:5173-5189. [DOI: 10.1039/c9ob00405j] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Different synthetic strategies for accomplishing regio- and stereoselective fluorinations of carbohydrate scaffolds are discussed in light of the biological implications arising from such substitutions.
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Affiliation(s)
- María Laura Uhrig
- Universidad de Buenos Aires
- Facultad de Ciencias Exactas y Naturales
- Departamento de Química Orgánica
- C1428EG Buenos Aires
- Argentina
| | - Beatriz Lantaño
- Departmento de Química Orgánica
- Facultad de Farmacia y Bioquímica
- Universidad de Buenos Aires
- Junin 954 CP1113-Buenos Aires
- Argentina
| | - Al Postigo
- Departmento de Química Orgánica
- Facultad de Farmacia y Bioquímica
- Universidad de Buenos Aires
- Junin 954 CP1113-Buenos Aires
- Argentina
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15
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Ahmadipour S, Miller GJ. Recent advances in the chemical synthesis of sugar-nucleotides. Carbohydr Res 2017; 451:95-109. [PMID: 28923409 DOI: 10.1016/j.carres.2017.08.014] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2017] [Revised: 08/28/2017] [Accepted: 08/29/2017] [Indexed: 10/18/2022]
Affiliation(s)
- Sanaz Ahmadipour
- Lennard-Jones Laboratory, School of Chemical and Physical Sciences, Keele University, Keele, Staffordshire ST5 5BG, UK
| | - Gavin J Miller
- Lennard-Jones Laboratory, School of Chemical and Physical Sciences, Keele University, Keele, Staffordshire ST5 5BG, UK.
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16
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Affiliation(s)
- Weijia Xie
- State Key Laboratory of Natural Medicines and Department of Medicinal Chemistry; China Pharmaceutical University; 24 Tong Jia Xiang Nanjing 210009 P. R. China
| | - Aijun Lin
- State Key Laboratory of Natural Medicines and Department of Medicinal Chemistry; China Pharmaceutical University; 24 Tong Jia Xiang Nanjing 210009 P. R. China
| | - Jinyi Xu
- State Key Laboratory of Natural Medicines and Department of Medicinal Chemistry; China Pharmaceutical University; 24 Tong Jia Xiang Nanjing 210009 P. R. China
| | - Xiaoming Wu
- State Key Laboratory of Natural Medicines and Department of Medicinal Chemistry; China Pharmaceutical University; 24 Tong Jia Xiang Nanjing 210009 P. R. China
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17
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Lin GM, Sun HG, Liu HW. Study of Uridine 5'-Diphosphate (UDP)-Galactopyranose Mutase Using UDP-5-Fluorogalactopyranose as a Probe: Incubation Results and Mechanistic Implications. Org Lett 2016; 18:3438-41. [PMID: 27384425 PMCID: PMC5474323 DOI: 10.1021/acs.orglett.6b01618] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Uridine 5'-diphosphate-5-fluorogalactopyranose (UDP-5F-Galp, 7) was synthesized, and its effect on UDP-Galp mutase (UGM) was investigated. UGM facilitated the hydrolysis of 7 to yield UDP and 5-oxogalactose (24), but no 11 was detected. (19)F NMR and trapping experiments demonstrated that the reaction involves the initial formation of a substrate-cofactor adduct followed by decomposition of the resulting C5 gem-fluorohydrin to generate a 5-oxo intermediate (10). The results support the current mechanistic proposal for UGM and suggest new directions for designing mechanism-based inhibitors.
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Affiliation(s)
- Geng-Min Lin
- Department of Chemistry, The University of Texas at Austin, Austin, Texas 78712, United States
| | - He G. Sun
- Division of Chemical Biology and Medicinal Chemistry, College of Pharmacy, The University of Texas at Austin, Austin, Texas 78712, United States
| | - Hung-wen Liu
- Department of Chemistry, The University of Texas at Austin, Austin, Texas 78712, United States
- Division of Chemical Biology and Medicinal Chemistry, College of Pharmacy, The University of Texas at Austin, Austin, Texas 78712, United States
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18
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Horník Š, Červenková Šťastná L, Cuřínová P, Sýkora J, Káňová K, Hrstka R, Císařová I, Dračínský M, Karban J. Synthesis and in vitro cytotoxicity of acetylated 3-fluoro, 4-fluoro and 3,4-difluoro analogs of D-glucosamine and D-galactosamine. Beilstein J Org Chem 2016; 12:750-9. [PMID: 27340467 PMCID: PMC4901990 DOI: 10.3762/bjoc.12.75] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2016] [Accepted: 03/30/2016] [Indexed: 11/23/2022] Open
Abstract
Background: Derivatives of D-glucosamine and D-galactosamine represent an important family of the cell surface glycan components and their fluorinated analogs found use as metabolic inhibitors of complex glycan biosynthesis, or as probes for the study of protein–carbohydrate interactions. This work is focused on the synthesis of acetylated 3-deoxy-3-fluoro, 4-deoxy-4-fluoro and 3,4-dideoxy-3,4-difluoro analogs of D-glucosamine and D-galactosamine via 1,6-anhydrohexopyranose chemistry. Moreover, the cytotoxicity of the target compounds towards selected cancer cells is determined. Results: Introduction of fluorine at C-3 was achieved by the reaction of 1,6-anhydro-2-azido-2-deoxy-4-O-benzyl-β-D-glucopyranose or its 4-fluoro analog with DAST. The retention of configuration in this reaction is discussed. Fluorine at C-4 was installed by the reaction of 1,6:2,3-dianhydro-β-D-talopyranose with DAST, or by fluoridolysis of 1,6:3,4-dianhydro-2-azido-β-D-galactopyranose with KHF2. The amino group was introduced and masked as an azide in the synthesis. The 1-O-deacetylated 3-fluoro and 4-fluoro analogs of acetylated D-galactosamine inhibited proliferation of the human prostate cancer cell line PC-3 more than cisplatin and 5-fluorouracil (IC50 28 ± 3 μM and 54 ± 5 μM, respectively). Conclusion: A complete series of acetylated 3-fluoro, 4-fluoro and 3,4-difluoro analogs of D-glucosamine and D-galactosamine is now accessible by 1,6-anhydrohexopyranose chemistry. Intermediate fluorinated 1,6-anhydro-2-azido-hexopyranoses have potential as synthons in oligosaccharide assembly.
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Affiliation(s)
- Štěpán Horník
- Institute of Chemical Process Fundamentals of the CAS, Rozvojová 135, 165 02 Praha, Czech Republic
| | - Lucie Červenková Šťastná
- Institute of Chemical Process Fundamentals of the CAS, Rozvojová 135, 165 02 Praha, Czech Republic
| | - Petra Cuřínová
- Institute of Chemical Process Fundamentals of the CAS, Rozvojová 135, 165 02 Praha, Czech Republic
| | - Jan Sýkora
- Institute of Chemical Process Fundamentals of the CAS, Rozvojová 135, 165 02 Praha, Czech Republic
| | - Kateřina Káňová
- Regional Centre for Applied and Molecular Oncology, Masaryk Memorial Cancer Institute, Žlutý kopec 7, 656 53 Brno, Czech Republic
| | - Roman Hrstka
- Regional Centre for Applied and Molecular Oncology, Masaryk Memorial Cancer Institute, Žlutý kopec 7, 656 53 Brno, Czech Republic
| | - Ivana Císařová
- Department of Inorganic Chemistry, Charles University, Hlavova 2030, 128 43 Praha 2, Czech Republic
| | - Martin Dračínský
- Institute of Organic Chemistry and Biochemistry, Flemingovo nám. 2, 166 10 Praha 6, Czech Republic
| | - Jindřich Karban
- Institute of Chemical Process Fundamentals of the CAS, Rozvojová 135, 165 02 Praha, Czech Republic
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Mollet K, Goossens H, Piens N, Catak S, Waroquier M, Törnroos KW, Van Speybroeck V, D'hooghe M, De Kimpe N. Synthesis of 2‐Hydroxy‐1,4‐oxazin‐3‐ones through Ring Transformation of 3‐Hydroxy‐4‐(1,2‐dihydroxyethyl)‐β‐lactams and a Study of Their Reactivity. Chemistry 2013; 19:3383-96. [DOI: 10.1002/chem.201203314] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2012] [Indexed: 01/30/2023]
Affiliation(s)
- Karen Mollet
- Department of Sustainable Organic Chemistry and Technology, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, 9000 Ghent (Belgium), Fax: (+32) 9‐264‐62‐21
| | - Hannelore Goossens
- Center for Molecular Modeling, Ghent University, Technologiepark 903, 9052 Zwijnaarde (Belgium), Member of QCMM‐Alliance, Ghent‐Brussels (Belgium), Fax: (+32) 9‐264‐66‐97
| | - Nicola Piens
- Department of Sustainable Organic Chemistry and Technology, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, 9000 Ghent (Belgium), Fax: (+32) 9‐264‐62‐21
| | - Saron Catak
- Center for Molecular Modeling, Ghent University, Technologiepark 903, 9052 Zwijnaarde (Belgium), Member of QCMM‐Alliance, Ghent‐Brussels (Belgium), Fax: (+32) 9‐264‐66‐97
- Current address: Syngenta Crop Protection, Münchwilen AG, 4332 Stein (Switzerland)
| | - Michel Waroquier
- Center for Molecular Modeling, Ghent University, Technologiepark 903, 9052 Zwijnaarde (Belgium), Member of QCMM‐Alliance, Ghent‐Brussels (Belgium), Fax: (+32) 9‐264‐66‐97
| | - Karl W. Törnroos
- Department of Chemistry, University of Bergen, Allégt. 41, 5007 Bergen (Norway)
| | - Veronique Van Speybroeck
- Center for Molecular Modeling, Ghent University, Technologiepark 903, 9052 Zwijnaarde (Belgium), Member of QCMM‐Alliance, Ghent‐Brussels (Belgium), Fax: (+32) 9‐264‐66‐97
| | - Matthias D'hooghe
- Department of Sustainable Organic Chemistry and Technology, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, 9000 Ghent (Belgium), Fax: (+32) 9‐264‐62‐21
| | - Norbert De Kimpe
- Department of Sustainable Organic Chemistry and Technology, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, 9000 Ghent (Belgium), Fax: (+32) 9‐264‐62‐21
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20
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Iqbal Z, Lyubimtsev A, Hanack M, Ziegler T. Synthesis and characterization of 1,8(11),15(18),22(25)-tetraglycosylated zinc(II) phthalocyanines. J PORPHYR PHTHALOCYA 2012. [DOI: 10.1142/s1088424610002343] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
In continuation of our work on glycosylated phthalocyanines, a new series of 1,8(11),15(18),22(25)-tetraglycosylated zinc(II) phthalocyanines (PcZns) have been synthesized and characterized. 3-glycosylated phthalonitriles were synthesized through nitrite displacement in 3-nitrophthalonitrile with anomerically deprotected glycoses. The anomerically glycosylated phthalonitriles were then treated with hexamethyldisilazane (HMDS), trimethylsilyltriflate (TMSOTf) and zinc salt in DMF to form the corresponding acetyl-protected PcZns, followed by deprotection of acetyl groups by NaOMe in methanol/DMSO mixture. The formed unprotected tetraglycosylated PcZns are highly soluble in water, which is a necessary condition for potential biological applications.
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Affiliation(s)
- Zafar Iqbal
- Institut für Organische Chemie der Universität Tübingen, Auf der Morgenstelle 18, 72076 Tübingen, Germany
| | - Alexey Lyubimtsev
- Institut für Organische Chemie der Universität Tübingen, Auf der Morgenstelle 18, 72076 Tübingen, Germany
- Ivanovo State University of Chemistry and Technology, F. Engels str. 7, 15300 Ivanovo, Russia
| | - Michael Hanack
- Institut für Organische Chemie der Universität Tübingen, Auf der Morgenstelle 18, 72076 Tübingen, Germany
| | - Thomas Ziegler
- Institut für Organische Chemie der Universität Tübingen, Auf der Morgenstelle 18, 72076 Tübingen, Germany
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21
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Design and synthesis of novel cell wall inhibitors of Mycobacterium tuberculosis GlmM and GlmU. Carbohydr Res 2011; 346:1714-20. [DOI: 10.1016/j.carres.2011.05.024] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2011] [Revised: 05/17/2011] [Accepted: 05/21/2011] [Indexed: 11/18/2022]
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22
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Frantom PA, Coward JK, Blanchard JS. UDP-(5F)-GlcNAc acts as a slow-binding inhibitor of MshA, a retaining glycosyltransferase. J Am Chem Soc 2010; 132:6626-7. [PMID: 20411981 DOI: 10.1021/ja101231a] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Glycosyltransferase enzymes play important roles in numerous cellular pathways. Despite their participation in many therapeutically relevant pathways, there is a paucity of information on how to effectively inhibit this class of enzymes. Here we report that UDP-(5F)-GlcNAc acts as a slow-binding, competitive inhibitor of the retaining glycosyltransferase MshA from Corynebacterium glutamicum (K(i) approximately 1.6 muM). The kinetic data are consistent with a single-step inhibition mechanism whose equilibration is slow relative to catalysis. We believe that this is the first slow-onset inhibitor to be reported for the glycosyltransferase family of enzymes. The potent inhibition of the enzyme by the fluoro-substituted substrate is consistent with the involvement of an oxocarbenium transition-state structure, which has been previously proposed for this family of enzymes. Additionally, although several members of the GT-B enzyme family, including MshA, have been shown to undergo a conformational change upon UDP-GlcNAc binding, the kinetic data are inconsistent with a two-step inhibition mechanism. This suggests that there may be other conformations of the enzyme that are useful for the design of inhibitors against the large family of GT-B glycosyltransferase enzymes.
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Affiliation(s)
- Patrick A Frantom
- Department of Biochemistry, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, New York 10461, USA.
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23
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Xue J, Kumar V, Khaja SD, Chandrasekaran E, Locke RD, Matta KL. Syntheses of fluorine-containing mucin core 2/core 6 structures using novel fluorinated glucosaminyl donors. Tetrahedron 2009. [DOI: 10.1016/j.tet.2009.07.089] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
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24
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Hagena TL, Coward JK. Fluoridolysis of 5,6-epoxy carbohydrates: application to the synthesis of 5-fluoro lactosamine and isolactosamine glycosides. ACTA ACUST UNITED AC 2009. [DOI: 10.1016/j.tetasy.2009.03.025] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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25
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Rempel BP, Withers SG. Non-Stick Sugars: Synthesis of Difluorosugar Fluorides as Potential Glycosidase Inactivators. Aust J Chem 2009. [DOI: 10.1071/ch09223] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Four new difluorosugar fluorides, 2-deoxy-2,5-difluoro-α-l-idopyranosyl fluoride, 1,5-difluoro-d-glucopyranosyl fluoride, 1,5-difluoro-l-idopyranosyl fluoride, and 2-deoxy-1,2-difluoro-d-glucopyranosyl fluoride, were synthesized from known precursors by a radical bromination/fluoride displacement sequence, followed by deprotection. The compounds were tested as time-dependent inactivators of the β-glucosidase from Agrobacterium sp. (Abg, EC 3.2.1.21) and, while they were shown to bind to the enzyme active site as reversible competitive inhibitors, the only time-dependent inactivation observed was traced to the presence of an extremely small amount (<0.1%) of a highly reactive contaminating impurity.
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26
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27
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Timmons SC, Jakeman DL. Stereospecific synthesis of sugar-1-phosphates and their conversion to sugar nucleotides. Carbohydr Res 2008; 343:865-74. [PMID: 18299123 DOI: 10.1016/j.carres.2008.01.046] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2007] [Revised: 01/23/2008] [Accepted: 01/31/2008] [Indexed: 11/16/2022]
Abstract
As Leloir glycosyltransferases are increasingly being used to prepare oligosaccharides, glycoconjugates, and glycosylated natural products, efficient access to stereopure sugar nucleotide donor substrates is required. Herein, the rapid synthesis and purification of eight sugar nucleotides is described by a facile 30 min activation of nucleoside 5'-monophosphates bearing purine and pyrimidine bases with trifluoroacetic anhydride and N-methylimidazole, followed by a 2 h coupling with stereospecifically prepared sugar-1-phosphates. Tributylammonium bicarbonate and tributylammonium acetate were the ion-pair reagents of choice for the C18 reversed-phase purification of 6-deoxysugar nucleotides, and hexose or pentose-derived sugar nucleotides, respectively.
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Affiliation(s)
- Shannon C Timmons
- Department of Chemistry, Dalhousie University, Halifax, Nova Scotia, Canada
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28
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Abstract
Various 4'-F nucleosides have been prepared in only two to three steps via sequential bromination and fluorination of ribofuranoses or nucleosides.
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Affiliation(s)
- Seongmin Lee
- Department of Chemistry and Chemical Biology, Harvard University, Cambridge, Massachusetts 02138, USA
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29
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Hartman MC, Jiang S, Rush JS, Waechter CJ, Coward JK. Glycosyltransferase mechanisms: impact of a 5-fluoro substituent in acceptor and donor substrates on catalysis. Biochemistry 2007; 46:11630-8. [PMID: 17883281 PMCID: PMC2556460 DOI: 10.1021/bi700863s] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
In glycosyltransferase-catalyzed reactions a new carbohydrate-carbohydrate bond is formed between a carbohydrate acceptor and the carbohydrate moiety of either a sugar nucleotide donor or lipid-linked saccharide donor. It is currently believed that most glycosyltransferase-catalyzed reactions occur via an electrophilic activation mechanism with the formation of an oxocarbenium ion-like transition state, a hypothesis that makes clear predictions regarding the charge development on the donor (strong positive charge) and acceptor (minimal negative charge) substrates. To better understand the mechanism of these enzyme-catalyzed reactions, we have introduced a strongly electron-withdrawing group (fluorine) at C-5 of both donor and acceptor substrates in order to explore its effect on catalysis. In particular, we have investigated the effects of the 5-fluoro analogues on the kinetics of two glycosyltransferase-catalyzed reactions mediated by UDP-GlcNAc:GlcNAc-P-P-Dol N-acetylglucosaminyltransferase (chitobiosyl-P-P-lipid synthase, CLS) and beta-N-acetylglucosaminyl-beta-1,4 galactosyltransferase (GalT). The 5-fluoro group has a marked effect on catalysis when inserted into the UDP-GlcNAc donor, with the UDP(5-F)-GlcNAc serving as a competitive inhibitor of CLS rather than a substrate. The (5-F)-GlcNAc beta-octyl glycoside acceptor, however, is an excellent substrate for GalT. Both of these results support a weakly associative transition state for glycosyltransferase-catalyzed reactions that proceed with inversion of configuration.
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Affiliation(s)
- Matthew C.T. Hartman
- Departments of Chemistry and Medicinal Chemistry, University of Michigan, Ann Arbor, MI 48109-1055
| | - Songmin Jiang
- Department of Molecular & Cellular Biochemistry, University of Kentucky College of Medicine, Lexington, KY 40536-0001
| | - Jeffrey S. Rush
- Department of Molecular & Cellular Biochemistry, University of Kentucky College of Medicine, Lexington, KY 40536-0001
| | - Charles J. Waechter
- Department of Molecular & Cellular Biochemistry, University of Kentucky College of Medicine, Lexington, KY 40536-0001
| | - James K. Coward
- Departments of Chemistry and Medicinal Chemistry, University of Michigan, Ann Arbor, MI 48109-1055
- To whom correspondence should be addressed: Phone: 734-936-2843. FAX: 734-647-4865. E-mail:
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30
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Alvarez-Mico X, Calvete MJ, Hanack M, Ziegler T. The first example of anomeric glycoconjugation to phthalocyanines. Tetrahedron Lett 2006. [DOI: 10.1016/j.tetlet.2006.03.029] [Citation(s) in RCA: 56] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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31
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Makino A, Sakamoto J, Ohmae M, Kobayashi S. Effect of Fluorine Substituent on the Chitinase-catalyzed Polymerization of Sugar Oxazoline Derivatives. CHEM LETT 2006. [DOI: 10.1246/cl.2006.160] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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32
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Rai R, McAlexander I, Chang CWT. SYNTHETIC GLYCODIVERSIFICATION. FROM AMINOSUGARS TO AMINOGLYCOSIDE ANTIBIOTICS. A REVIEW. ORG PREP PROCED INT 2005. [DOI: 10.1080/00304940509354969] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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33
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Ueda T, Feng F, Sadamoto R, Niikura K, Monde K, Nishimura SI. Synthesis of 4-Fluorinated UDP-MurNAc Pentapeptide as an Inhibitor of Bacterial Growth. Org Lett 2004; 6:1753-6. [PMID: 15151406 DOI: 10.1021/ol049598w] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
4-Fluorinated UDP-MurNAc pentapeptide, 2, has been synthesized. In our previous study, UDP-MurNAc pentapeptide analogue 1 was found to be incorporated into the bacterial cell wall through biosynthesis. Compound 2 showed growth-inhibition activity against Gram-positive bacteria when it was added to growth media at 0.01 mg/mL. [structure--see text]
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Affiliation(s)
- Taichi Ueda
- Bio-Macromolecular Chemistry Lab, Division of Biological Sciences, Graduate School of Science, Frontier Research Center for Post-Genomic Science and Technology, Hokkaido University, Kita 21, Nishi 11, Sapporo 001-0021 Japan
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Kasuya MCZ, Cusi R, Ishihara O, Miyagawa A, Hashimoto K, Sato T, Hatanaka K. Fluorous-tagged compound: a viable scaffold to prime oligosaccharide synthesis by cellular enzymes. Biochem Biophys Res Commun 2004; 316:599-604. [PMID: 15033442 DOI: 10.1016/j.bbrc.2004.02.094] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2004] [Indexed: 11/23/2022]
Abstract
Fluorous-tagged saccharide primers could be viable scaffolds for the synthesis of oligosaccharides. This research demonstrates that a fluorine-containing saccharide derivative could actually be taken up by the cell, the saccharide chain elongated by cellular enzymes, and the elongated product released by the cells to the culture medium. A fluorous-tagged lactoside primer, 6-(perfluorohexyl)hexyl-4-O-(beta-D-galactopyranosyl)-beta-D-glucopyranoside, was chemically synthesized and introduced in mouse B16 cells to prime oligosaccharide synthesis. Uptake of the primer by B16 cells resulted in the sialylation of the terminal galactose residue to afford an oligosaccharide with the same glycan structure as ganglioside GM3. The presence of many fluorine atoms did not have any adverse effects to the cells. Moreover, the number of fluorine atoms did not pose a steric barrier and instead, their presence possibly increased the hydrophobicity of the primer and enhanced membrane permeability. This strategy of using a fluorous-tagged primer and cells can pave the way for an easier way of preparing oligosaccharides via an environment-friendly approach that eliminates the use of large amounts of organic solvents.
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Affiliation(s)
- Maria Carmelita Z Kasuya
- Institute of Industrial Science, University of Tokyo, 4-6-1 Komaba, Meguro-ku, Tokyo 153-8505, Japan
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