1
|
Xia Y, Wang G, He C, Chen H. A Strong Supramolecular Mechanophore with Controlled Mechanical Strength. Angew Chem Int Ed Engl 2024:e202406738. [PMID: 38869842 DOI: 10.1002/anie.202406738] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2024] [Revised: 06/11/2024] [Accepted: 06/13/2024] [Indexed: 06/14/2024]
Abstract
Supramolecular mechanophores typically exhibit much lower mechanical strengths than covalent counterparts, with strengths usually around 100 pN, which is significantly lower than the nN-scale strength of covalent bonds. Inspired by the slow dissociation kinetics of the cucurbit[7]uril (CB[7])-hexanoate-isoquinoline (HIQ) complex, we discovered that charge-dipole repulsion can be utilized to create strong supramolecular mechanophores. When activated at its -COO- state, the CB[7]-HIQ complex exhibits a high mechanical strength of ~700 pN, comparable to weak covalent bonds such as Au-S bonds or thiol-maleimide adducts. The strength of the CB[7]-HIQ complex can also be tuned with pH in a gradual manner, with a minimum value of ~150 pN at its -COOH state, similar to an ordinary supramolecular conjugate. This research may pave the way for the development of supramolecular architectures that combine the advantages of covalent and supramolecular systems.
Collapse
Affiliation(s)
- Yu Xia
- School of Chemistry and Chemical Engineering, The Key Laboratory of Special Functional Aggregated Materials, Ministry of Education, Shandong University, Jinan, 250100, P. R. China
| | - Guannan Wang
- Beijing Advanced Innovation Center for Soft Matter Science and Engineering, Beijing University of Chemical Technology, Beijng, 100029, P. R. China
| | - Chengzhi He
- Beijing Advanced Innovation Center for Soft Matter Science and Engineering, Beijing University of Chemical Technology, Beijng, 100029, P. R. China
| | - Hao Chen
- School of Chemistry and Chemical Engineering, The Key Laboratory of Special Functional Aggregated Materials, Ministry of Education, Shandong University, Jinan, 250100, P. R. China
| |
Collapse
|
2
|
Raj G, Vasudev DS, Christopher S, Babulal A, Harsha P, Ram S, Tiwari M, Sauer M, Varghese R. Multifunctional siRNA/ferrocene/cyclodextrin nanoparticles for enhanced chemodynamic cancer therapy. NANOSCALE 2024; 16:3755-3763. [PMID: 38299362 DOI: 10.1039/d3nr06071c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/02/2024]
Abstract
The therapeutic outcome of chemodynamic therapy (CDT) is greatly hindered by the presence of oxidative damage repair proteins (MTH1) inside cancer cells. These oxidative damage repair proteins detoxify the action of radicals generated by Fenton or Fenton-like reactions. Hence, it is extremely important to develop a simple strategy for the downregulation of MTH1 protein inside cancer cells along with the delivery of metal ions into cancer cells. A one-pot host-guest supramolecular approach for the codelivery of MTH1 siRNA and metal ions into a cancer cell is reported. Our approach involves the fabrication of an inclusion complex between cationic β-cyclodextrin and a ferrocene prodrug, which spontaneously undergoes amphiphilicity-driven self-assembly to form spherical nanoparticles (NPs) having a positively charged surface. The cationic surface of the NPs was then explored for the loading of MTH1 siRNA through electrostatic interactions. Using HeLa cells as a representative example, efficient uptake of the NPs, delivery of MTH1 siRNA and the enhanced CDT of the nanoformulation are demonstrated. This work highlights the potential of the supramolecular approach as a simple yet efficient method for the delivery of siRNA across the cell membrane for enhanced chemodynamic therapy.
Collapse
Affiliation(s)
- Gowtham Raj
- School of Chemistry, Indian Institute of Science Education and Research (IISER) Thiruvananthapuram, Trivandrum-695551, Kerala, India.
| | - D S Vasudev
- School of Chemistry, Indian Institute of Science Education and Research (IISER) Thiruvananthapuram, Trivandrum-695551, Kerala, India.
| | - Sarah Christopher
- School of Chemistry, Indian Institute of Science Education and Research (IISER) Thiruvananthapuram, Trivandrum-695551, Kerala, India.
| | - Anupama Babulal
- School of Chemistry, Indian Institute of Science Education and Research (IISER) Thiruvananthapuram, Trivandrum-695551, Kerala, India.
| | - P Harsha
- School of Chemistry, Indian Institute of Science Education and Research (IISER) Thiruvananthapuram, Trivandrum-695551, Kerala, India.
| | - Soumakanya Ram
- School of Chemistry, Indian Institute of Science Education and Research (IISER) Thiruvananthapuram, Trivandrum-695551, Kerala, India.
| | - Mehul Tiwari
- School of Chemistry, Indian Institute of Science Education and Research (IISER) Thiruvananthapuram, Trivandrum-695551, Kerala, India.
| | - Markus Sauer
- Department of Biotechnology and Biophysics, Biocenter, Julius Maximilian University of Würzburg, Würzburg, Germany
| | - Reji Varghese
- School of Chemistry, Indian Institute of Science Education and Research (IISER) Thiruvananthapuram, Trivandrum-695551, Kerala, India.
| |
Collapse
|
3
|
Liu Y, Wang L, Zhao L, Zhang Y, Li ZT, Huang F. Multiple hydrogen bonding driven supramolecular architectures and their biomedical applications. Chem Soc Rev 2024; 53:1592-1623. [PMID: 38167687 DOI: 10.1039/d3cs00705g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2024]
Abstract
Supramolecular chemistry combines the strength of molecular assembly via various molecular interactions. Hydrogen bonding facilitated self-assembly with the advantages of directionality, specificity, reversibility, and strength is a promising approach for constructing advanced supramolecules. There are still some challenges in hydrogen bonding based supramolecular polymers, such as complexity originating from tautomerism of the molecular building modules, the assembly process, and structure versatility of building blocks. In this review, examples are selected to give insights into multiple hydrogen bonding driven emerging supramolecular architectures. We focus on chiral supramolecular assemblies, multiple hydrogen bonding modules as stimuli responsive sources, interpenetrating polymer networks, multiple hydrogen bonding assisted organic frameworks, supramolecular adhesives, energy dissipators, and quantitative analysis of nano-adhesion. The applications in biomedical materials are focused with detailed examples including drug design evolution for myotonic dystrophy, molecular assembly for advanced drug delivery, an indicator displacement strategy for DNA detection, tissue engineering, and self-assembly complexes as gene delivery vectors for gene transfection. In addition, insights into the current challenges and future perspectives of this field to propel the development of multiple hydrogen bonding facilitated supramolecular materials are proposed.
Collapse
Affiliation(s)
- Yanxia Liu
- School of Materials and Energy, University of Electronic Science and Technology of China, Chengdu 611731, Sichuan, China.
| | - Lulu Wang
- State Key Laboratory of Chemistry and Utilization of Carbon-based Energy Resource, Xinjiang University, Urumqi, Xinjiang 830046, China
| | - Lin Zhao
- School of Materials and Energy, University of Electronic Science and Technology of China, Chengdu 611731, Sichuan, China.
| | - Yagang Zhang
- School of Materials and Energy, University of Electronic Science and Technology of China, Chengdu 611731, Sichuan, China.
| | - Zhan-Ting Li
- Key Laboratory of Synthetic and Self-Assembly Chemistry for Organic Functional Molecules, Shanghai Institute of Organic Chemistry (SIOC), Chinese Academy of Sciences, Shanghai 200032, China
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, 2205 Songhu Road, Shanghai 200438, China.
| | - Feihe Huang
- Stoddart Institute of Molecular Science, Department of Chemistry, Zhejiang University, Hangzhou 310058, China.
- ZJU-Hangzhou Global Scientific and Technological Innovation Center-Hangzhou Zhijiang Silicone Chemicals Co. Ltd. Joint Lab, Zhejiang-Israel Joint Laboratory of Self-Assembling Functional Materials, ZJU-Hangzhou Global Scientific and Technological Innovation Center, Zhejiang University, Hangzhou 311215, China
| |
Collapse
|
4
|
Bai R, Zhang Z, Di W, Yang X, Zhao J, Ouyang H, Liu G, Zhang X, Cheng L, Cao Y, Yu W, Yan X. Oligo[2]catenane That Is Robust at Both the Microscopic and Macroscopic Scales. J Am Chem Soc 2023; 145:9011-9020. [PMID: 37052468 DOI: 10.1021/jacs.3c00221] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/14/2023]
Abstract
Polycatenanes are extremely attractive topological architectures on account of their high degrees of conformational freedom and multiple motion patterns of the mechanically interlocked macrocycles. However, exploitation of these peculiar structural and dynamic characteristics to develop robust catenane materials is still a challenging goal. Herein, we synthesize an oligo[2]catenane that showcases mechanically robust properties at both the microscopic and macroscopic scales. The key feature of the structural design is controlling the force-bearing points on the metal-coordinated core of the [2]catenane moiety that is able to maximize the energy dissipation of the oligo[2]catenane via dissociation of metal-coordination bonds and then activation of sequential intramolecular motions of circumrotation, translation, and elongation under an external force. As such, at the microscopic level, the single-molecule force spectroscopy measurement exhibits that the force to rupture dynamic bonds in the oligo[2]catenane reaches a record high of 588 ± 233 pN. At the macroscopic level, our oligo[2]catenane manifests itself as the toughest catenane material ever reported (15.2 vs 2.43 MJ/m3). These fundamental findings not only deepen the understanding of the structure-property relationship of poly[2]catenanes with a full set of dynamic features but also provide a guiding principle to fabricate high-performance mechanically interlocked catenane materials.
Collapse
Affiliation(s)
- Ruixue Bai
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Jiao Tong University, Shanghai 200240, P. R. China
| | - Zhaoming Zhang
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Jiao Tong University, Shanghai 200240, P. R. China
| | - Weishuai Di
- Collaborative Innovation Center of Advanced Microstructures, National Laboratory of Solid State Microstructure, Department of Physics, Nanjing University, Nanjing 210093, P. R. China
| | - Xue Yang
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Jiao Tong University, Shanghai 200240, P. R. China
| | - Jun Zhao
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Jiao Tong University, Shanghai 200240, P. R. China
| | - Hao Ouyang
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Jiao Tong University, Shanghai 200240, P. R. China
| | - Guoquan Liu
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Jiao Tong University, Shanghai 200240, P. R. China
| | - Xinhai Zhang
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Jiao Tong University, Shanghai 200240, P. R. China
| | - Lin Cheng
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Jiao Tong University, Shanghai 200240, P. R. China
| | - Yi Cao
- Collaborative Innovation Center of Advanced Microstructures, National Laboratory of Solid State Microstructure, Department of Physics, Nanjing University, Nanjing 210093, P. R. China
| | - Wei Yu
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Jiao Tong University, Shanghai 200240, P. R. China
| | - Xuzhou Yan
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Jiao Tong University, Shanghai 200240, P. R. China
| |
Collapse
|
5
|
Phosphorylation disrupts long-distance electron transport in cytochrome c. Nat Commun 2022; 13:7100. [PMID: 36402842 PMCID: PMC9675734 DOI: 10.1038/s41467-022-34809-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2022] [Accepted: 11/08/2022] [Indexed: 11/21/2022] Open
Abstract
It has been recently shown that electron transfer between mitochondrial cytochrome c and the cytochrome c1 subunit of the cytochrome bc1 can proceed at long-distance through the aqueous solution. Cytochrome c is thought to adjust its activity by changing the affinity for its partners via Tyr48 phosphorylation, but it is unknown how it impacts the nanoscopic environment, interaction forces, and long-range electron transfer. Here, we constrain the orientation and separation between cytochrome c1 and cytochrome c or the phosphomimetic Y48pCMF cytochrome c, and deploy an array of single-molecule, bulk, and computational methods to investigate the molecular mechanism of electron transfer regulation by cytochrome c phosphorylation. We demonstrate that phosphorylation impairs long-range electron transfer, shortens the long-distance charge conduit between the partners, strengthens their interaction, and departs it from equilibrium. These results unveil a nanoscopic view of the interaction between redox protein partners in electron transport chains and its mechanisms of regulation.
Collapse
|
6
|
He X, Lu Q. Design and fabrication strategies of cellulose nanocrystal-based hydrogel and its highlighted application using 3D printing: A review. Carbohydr Polym 2022; 301:120351. [DOI: 10.1016/j.carbpol.2022.120351] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2022] [Revised: 10/30/2022] [Accepted: 11/11/2022] [Indexed: 11/18/2022]
|
7
|
Chen J, Peng Q, Peng X, Zhang H, Zeng H. Probing and Manipulating Noncovalent Interactions in Functional Polymeric Systems. Chem Rev 2022; 122:14594-14678. [PMID: 36054924 DOI: 10.1021/acs.chemrev.2c00215] [Citation(s) in RCA: 45] [Impact Index Per Article: 22.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Noncovalent interactions, which usually feature tunable strength, reversibility, and environmental adaptability, have been recognized as driving forces in a variety of biological and chemical processes, contributing to the recognition between molecules, the formation of molecule clusters, and the establishment of complex structures of macromolecules. The marriage of noncovalent interactions and conventional covalent polymers offers the systems novel mechanical, physicochemical, and biological properties, which are highly dependent on the binding mechanisms of the noncovalent interactions that can be illuminated via quantification. This review systematically discusses the nanomechanical characterization of typical noncovalent interactions in polymeric systems, mainly through direct force measurements at microscopic, nanoscopic, and molecular levels, which provide quantitative information (e.g., ranges, strengths, and dynamics) on the binding behaviors. The fundamental understandings of intermolecular and interfacial interactions are then correlated to the macroscopic performances of a series of noncovalently bonded polymers, whose functions (e.g., stimuli-responsiveness, self-healing capacity, universal adhesiveness) can be customized through the manipulation of the noncovalent interactions, providing insights into the rational design of advanced materials with applications in biomedical, energy, environmental, and other engineering fields.
Collapse
Affiliation(s)
- Jingsi Chen
- Department of Chemical and Materials Engineering, University of Alberta, Edmonton, Alberta T6G 1H9, Canada
| | - Qiongyao Peng
- Department of Chemical and Materials Engineering, University of Alberta, Edmonton, Alberta T6G 1H9, Canada
| | - Xuwen Peng
- Department of Chemical and Materials Engineering, University of Alberta, Edmonton, Alberta T6G 1H9, Canada
| | - Hao Zhang
- Department of Chemical and Materials Engineering, University of Alberta, Edmonton, Alberta T6G 1H9, Canada
| | - Hongbo Zeng
- Department of Chemical and Materials Engineering, University of Alberta, Edmonton, Alberta T6G 1H9, Canada
| |
Collapse
|
8
|
Zhang Y, Qiu Y, Zhang H. Computational Investigation of Structural Basis for Enhanced Binding of Isoflavone Analogues with Mitochondrial Aldehyde Dehydrogenase. ACS OMEGA 2022; 7:8115-8127. [PMID: 35284766 PMCID: PMC8908493 DOI: 10.1021/acsomega.2c00032] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/03/2022] [Accepted: 02/11/2022] [Indexed: 06/14/2023]
Abstract
Isoflavone compounds are potent inhibitors against mitochondrial aldehyde dehydrogenase (ALDH2) for the treatment of alcoholism and drug addiction, and an in-depth understanding of the underlying structural basis helps design new inhibitors for enhanced binding. Here, we investigated the binding poses and strengths of eight isoflavone analogues (including CVT-10216 and daidzin) with ALDH2 via computational methods of molecular docking, molecular dynamics (MD) simulation, molecular mechanics Poisson-Boltzmann surface area (MM-PBSA), steered MD, and umbrella sampling. Neither the Vina scoring of docked and MD-sampled complexes nor the nonbonded protein-inhibitor interaction energy from MD simulations is able to reproduce the relative binding strength of the inhibitors compared to experimental IC50 values. Considering the solvation contribution, MM-PBSA and relatively expensive umbrella sampling yield good performance for the relative binding (free) energies. The isoflavone skeleton prefers to form π-π stacking, π-sulfur, and π-alkyl interactions with planar (Phe and Trp) or sulfur-containing (Cys and Met) residues. The enhanced inhibition of CVT-10216 originates from both end groups of the isoflavone skeleton offering strong van der Waals contacts and from the methylsulfonamide group at the 4' position by hydrogen bonding (HB) with neighboring receptor residues. These results indicate that the hydrophobic binding tunnel of ALDH2 is larger than the isoflavone skeleton in length and thus an extended hydrophobic core is likely a premise for potent inhibitors.
Collapse
|
9
|
Park J, Park J, Lee J, Lim C, Lee DW. Size compatibility and concentration dependent supramolecular host-guest interactions at interfaces. Nat Commun 2022; 13:112. [PMID: 35013244 PMCID: PMC8748952 DOI: 10.1038/s41467-021-27659-w] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2021] [Accepted: 12/03/2021] [Indexed: 11/30/2022] Open
Abstract
The quantification of supramolecular host-guest interactions is important for finely modulating supramolecular systems. Previously, most host-guest interactions quantified using force spectroscopic techniques have been reported in force units. However, accurately evaluating the adhesion energies of host-guest pairs remains challenging. Herein, using a surface forces apparatus, we directly quantify the interaction energies between cyclodextrin (CD)-modified surfaces and ditopic adamantane (DAd) molecules in water as a function of the DAd concentration and the CD cavity size. The adhesion energy of the β-CD-DAd complex drastically increased with increasing DAd concentration and reached saturation. Moreover, the molecular adhesion energy of a single host-guest inclusion complex was evaluated to be ~9.51 kBT. This approach has potential for quantifying fundamental information toward furthering the understanding of supramolecular chemistry and its applications, such as molecular actuators, underwater adhesives, and biosensors, which require precise tuning of specific host-guest interactions.
Collapse
Affiliation(s)
- Jintae Park
- School of Energy & Chemical Engineering, Ulsan National Institute of Science and Technology (UNIST), Ulsan, 44919, Republic of Korea
| | - Jinwoo Park
- School of Energy & Chemical Engineering, Ulsan National Institute of Science and Technology (UNIST), Ulsan, 44919, Republic of Korea
| | - Jinhoon Lee
- School of Energy & Chemical Engineering, Ulsan National Institute of Science and Technology (UNIST), Ulsan, 44919, Republic of Korea
| | - Chanoong Lim
- School of Energy & Chemical Engineering, Ulsan National Institute of Science and Technology (UNIST), Ulsan, 44919, Republic of Korea.
| | - Dong Woog Lee
- School of Energy & Chemical Engineering, Ulsan National Institute of Science and Technology (UNIST), Ulsan, 44919, Republic of Korea.
| |
Collapse
|
10
|
Pandey S, Xiang Y, Walpita Kankanamalage DVD, Jayawickramarajah J, Leng Y, Mao H. Measurement of Single-Molecule Forces in Cholesterol and Cyclodextrin Host-Guest Complexes. J Phys Chem B 2021; 125:11112-11121. [PMID: 34523939 PMCID: PMC8788999 DOI: 10.1021/acs.jpcb.1c03916] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
Biological host molecules such as β-cyclodextrins (β-CDs) have been used to remove cholesterol guests from membranes and artery plaques. In this work, we calibrated the host-guest intermolecular mechanical forces (IMMFs) between cholesterol and cyclodextrin complexes by combining single-molecule force spectroscopy in optical tweezers and computational molecular simulations for the first time. Compared to native β-CD, methylated beta cyclodextrins complexed with cholesterols demonstrated higher mechanical stabilities due to the loss of more high-energy water molecules inside the methylated β-CD cavities. This result is consistent with the finding that methylated β-CD is more potent at solubilizing cholesterols than β-CD, suggesting that the IMMF can serve as a novel indicator to evaluate the solubility of small molecules such as cholesterols. Importantly, we found that the force spectroscopy measured in such biological host-guest complexes is direction-dependent: pulling from the alkyl end of the cholesterol molecule resulted in a larger IMMF than that from the hydroxyl end of the cholesterol molecule. Molecular dynamics coupled with umbrella sampling simulations further revealed that cholesterol molecules tend to enter or leave from the wide opening of cyclodextrins. Such an orientation rationalizes that cyclodextrins are rather efficient at extracting cholesterols from the phospholipid bilayer in which hydroxyl groups of cholesterols are readily exposed to the hydrophobic cavities of cyclodextrins. We anticipate that the IMMF measured by both experimental and computational force spectroscopy measurements help elucidate solubility mechanisms not only for cholesterols in different environments but also to host-guest systems in general, which have been widely exploited for their solubilization properties in drug delivery, for example.
Collapse
Affiliation(s)
- Shankar Pandey
- Department of Chemistry and Biochemistry, and Advanced Materials and Liquid Crystal Institute, Kent State University, Kent, OH, 44242
| | - Yuan Xiang
- School of Engineering and Applied Science, The George Washington University, Washington, DC 20052, USA
| | | | | | - Yongsheng Leng
- School of Engineering and Applied Science, The George Washington University, Washington, DC 20052, USA
| | - Hanbin Mao
- Department of Chemistry and Biochemistry, and Advanced Materials and Liquid Crystal Institute, Kent State University, Kent, OH, 44242
| |
Collapse
|
11
|
Yang B, Wei K, Loebel C, Zhang K, Feng Q, Li R, Wong SHD, Xu X, Lau C, Chen X, Zhao P, Yin C, Burdick JA, Wang Y, Bian L. Enhanced mechanosensing of cells in synthetic 3D matrix with controlled biophysical dynamics. Nat Commun 2021; 12:3514. [PMID: 34112772 PMCID: PMC8192531 DOI: 10.1038/s41467-021-23120-0] [Citation(s) in RCA: 65] [Impact Index Per Article: 21.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2020] [Accepted: 03/19/2021] [Indexed: 01/08/2023] Open
Abstract
3D culture of cells in designer biomaterial matrices provides a biomimetic cellular microenvironment and can yield critical insights into cellular behaviours not available from conventional 2D cultures. Hydrogels with dynamic properties, achieved by incorporating either degradable structural components or reversible dynamic crosslinks, enable efficient cell adaptation of the matrix and support associated cellular functions. Herein we demonstrate that given similar equilibrium binding constants, hydrogels containing dynamic crosslinks with a large dissociation rate constant enable cell force-induced network reorganization, which results in rapid stellate spreading, assembly, mechanosensing, and differentiation of encapsulated stem cells when compared to similar hydrogels containing dynamic crosslinks with a low dissociation rate constant. Furthermore, the static and precise conjugation of cell adhesive ligands to the hydrogel subnetwork connected by such fast-dissociating crosslinks is also required for ultra-rapid stellate spreading (within 18 h post-encapsulation) and enhanced mechanosensing of stem cells in 3D. This work reveals the correlation between microscopic cell behaviours and the molecular level binding kinetics in hydrogel networks. Our findings provide valuable guidance to the design and evaluation of supramolecular biomaterials with cell-adaptable properties for studying cells in 3D cultures. 3D culture systems can provide critical insights into cellular behaviour. Here, the authors study the binding timescale of dynamic crosslinks and the conjugation stability of cell-adhesive ligands in cell–hydrogel network interactions to evaluate the impact on stem cell behaviour, mechanosensing and differentiation.
Collapse
Affiliation(s)
- Boguang Yang
- Department of Biomedical Engineering, The Chinese University of Hong Kong, Hong Kong, China
| | - Kongchang Wei
- Department of Biomedical Engineering, The Chinese University of Hong Kong, Hong Kong, China.,Empa, Swiss Federal Laboratories for Materials Science and Technology, Laboratory for Biomimetic Membranes and Textiles, St. Gallen, Switzerland
| | - Claudia Loebel
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA
| | - Kunyu Zhang
- Department of Biomedical Engineering, The Chinese University of Hong Kong, Hong Kong, China.,Department of Materials Science and Engineering, Johns Hopkins University, Baltimore, MD, USA
| | - Qian Feng
- Department of Biomedical Engineering, The Chinese University of Hong Kong, Hong Kong, China.,Key Laboratory of Biorheological Science and Technology, Ministry of Education College of Bioengineering, Chongqing University, Chongqing, China
| | - Rui Li
- Department of Biomedical Engineering, The Chinese University of Hong Kong, Hong Kong, China
| | - Siu Hong Dexter Wong
- Department of Biomedical Engineering, The Chinese University of Hong Kong, Hong Kong, China.,Department of Biomedical Engineering, The Hong Kong Polytechnic University, HongKong, China
| | - Xiayi Xu
- Department of Biomedical Engineering, The Chinese University of Hong Kong, Hong Kong, China
| | - Chunhon Lau
- Department of Physics, The Chinese University of Hong Kong, Hong Kong, China
| | - Xiaoyu Chen
- Department of Biomedical Engineering, The Chinese University of Hong Kong, Hong Kong, China.,Department of Mechanical Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA
| | - Pengchao Zhao
- Department of Biomedical Engineering, The Chinese University of Hong Kong, Hong Kong, China
| | - Chao Yin
- Department of Biomedical Engineering, The Chinese University of Hong Kong, Hong Kong, China
| | - Jason A Burdick
- Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, USA
| | - Yi Wang
- Department of Physics, The Chinese University of Hong Kong, Hong Kong, China.
| | - Liming Bian
- Department of Biomedical Engineering, The Chinese University of Hong Kong, Hong Kong, China. .,Shenzhen Research Institute, The Chinese University of Hong Kong, Hong Kong, China. .,China Orthopedic Regenerative Medicine Group (CORMed), Hangzhou, Zhejiang, China.
| |
Collapse
|
12
|
Akamatsu M, Kimura A, Yamanaga K, Sakai K, Sakai H. Anion-π interaction at the solid/water interfaces. Chem Commun (Camb) 2021; 57:4650-4653. [PMID: 33861227 DOI: 10.1039/d1cc01186c] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Anion-π interaction has been found to play a key role in interfacial phenomena. In this study, we evaluated the anion-π interactions at the solid/water interface. Anion adsorption originating from anion-π interaction at the interfaces followed the hydration energy and the presence of conjugated systems of the anions by the QCM measurements. Force curve measurements revealed that the single-molecule force of anion-π interaction between an NDI unit and the negatively charged surface of the cantilever was ∼40 pN. To the best of our knowledge, this is the first example of obtaining a single-molecule force for anion-π interactions.
Collapse
Affiliation(s)
- Masaaki Akamatsu
- Department of Pure and Applied Chemistry, Faculty of Science and Technology, Tokyo University of Science, 2641 Yamazaki, Noda, Chiba 278-8510, Japan and Research Institute for Science and Technology, Tokyo University of Science, 2641 Yamazaki, Noda, Chiba 278-8510, Japan
| | - Ayumi Kimura
- Department of Pure and Applied Chemistry, Faculty of Science and Technology, Tokyo University of Science, 2641 Yamazaki, Noda, Chiba 278-8510, Japan
| | - Koji Yamanaga
- Department of Pure and Applied Chemistry, Faculty of Science and Technology, Tokyo University of Science, 2641 Yamazaki, Noda, Chiba 278-8510, Japan
| | - Kenichi Sakai
- Department of Pure and Applied Chemistry, Faculty of Science and Technology, Tokyo University of Science, 2641 Yamazaki, Noda, Chiba 278-8510, Japan and Research Institute for Science and Technology, Tokyo University of Science, 2641 Yamazaki, Noda, Chiba 278-8510, Japan
| | - Hideki Sakai
- Department of Pure and Applied Chemistry, Faculty of Science and Technology, Tokyo University of Science, 2641 Yamazaki, Noda, Chiba 278-8510, Japan and Research Institute for Science and Technology, Tokyo University of Science, 2641 Yamazaki, Noda, Chiba 278-8510, Japan
| |
Collapse
|
13
|
Traeger H, Kiebala DJ, Weder C, Schrettl S. From Molecules to Polymers-Harnessing Inter- and Intramolecular Interactions to Create Mechanochromic Materials. Macromol Rapid Commun 2020; 42:e2000573. [PMID: 33191595 DOI: 10.1002/marc.202000573] [Citation(s) in RCA: 49] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2020] [Revised: 10/16/2020] [Indexed: 12/30/2022]
Abstract
The development of mechanophores as building blocks that serve as predefined weak linkages has enabled the creation of mechanoresponsive and mechanochromic polymer materials, which are interesting for a range of applications including the study of biological specimens or advanced security features. In typical mechanophores, covalent bonds are broken when polymers that contain these chemical motifs are exposed to mechanical forces, and changes of the optical properties upon bond scission can be harnessed as a signal that enables the detection of applied mechanical stresses and strains. Similar chromic effects upon mechanical deformation of polymers can also be achieved without relying on the scission of covalent bonds. The dissociation of motifs that feature directional noncovalent interactions, the disruption of aggregated molecules, and conformational changes in molecules or polymers constitute an attractive element for the design of mechanoresponsive and mechanochromic materials. In this article, it is reviewed how such alterations of molecules and polymers can be exploited for the development of mechanochromic materials that signal deformation without breaking covalent bonds. Recent illustrative examples are highlighted that showcase how the use of such mechanoresponsive motifs enables the visual mapping of stresses and damage in a reversible and highly sensitive manner.
Collapse
Affiliation(s)
- Hanna Traeger
- Adolphe Merkle Institute, University of Fribourg, Chemin des Verdiers 4, Fribourg, CH-1700, Switzerland
| | - Derek J Kiebala
- Adolphe Merkle Institute, University of Fribourg, Chemin des Verdiers 4, Fribourg, CH-1700, Switzerland
| | - Christoph Weder
- Adolphe Merkle Institute, University of Fribourg, Chemin des Verdiers 4, Fribourg, CH-1700, Switzerland
| | - Stephen Schrettl
- Adolphe Merkle Institute, University of Fribourg, Chemin des Verdiers 4, Fribourg, CH-1700, Switzerland
| |
Collapse
|
14
|
Garnier L, Bonal C, Malfreyt P. Free‐energy calculations of the host–guest association in grafted supramolecular assemblies. J Comput Chem 2020. [DOI: 10.1002/jcc.26382] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Ludovic Garnier
- Université Clermont Auvergne, CNRS, SIGMA Clermont, Institut de Chimie de Clermont‐Ferrand Clermont‐Ferrand France
| | - Christine Bonal
- Université Clermont Auvergne, CNRS, SIGMA Clermont, Institut de Chimie de Clermont‐Ferrand Clermont‐Ferrand France
| | - Patrice Malfreyt
- Université Clermont Auvergne, CNRS, SIGMA Clermont, Institut de Chimie de Clermont‐Ferrand Clermont‐Ferrand France
| |
Collapse
|
15
|
Curk T, Tito NB. First-order 'hyper-selective' binding transition of multivalent particles under force. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2020; 32:214002. [PMID: 31952055 DOI: 10.1088/1361-648x/ab6d12] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Multivalent particles bind to targets via many independent ligand-receptor bonding interactions. This microscopic design spans length scales in both synthetic and biological systems. Classic examples include interactions between cells, virus binding, synthetic ligand-coated micrometer-scale vesicles or smaller nano-particles, functionalised polymers, and toxins. Equilibrium multivalent binding is a continuous yet super-selective transition with respect to the number of ligands and receptors involved in the interaction. Increasing the ligand or receptor density on the two particles leads to sharp growth in the number of bound particles at equilibrium. Here we present a theory and Monte Carlo simulations to show that applying mechanical force to multivalent particles causes their adsorption/desorption isotherm on a surface to become sharper and more selective, with respect to variation in the number of ligands and receptors on the two objects. When the force is only applied to particles bound to the surface by one or more ligands, then the transition can become infinitely sharp and first-order-a new binding regime which we term 'hyper-selective'. Force may be imposed by, e.g. flow of solvent around the particles, a magnetic field, chemical gradients, or triggered uncoiling of inert oligomers/polymers tethered to the particles to provide a steric repulsion to the surface. This physical principle is a step towards 'all or nothing' binding selectivity in the design of multivalent constructs.
Collapse
Affiliation(s)
- Tine Curk
- Department of Materials Science and Engineering, Northwestern University, Evanston, IL 60208, United States of America
| | | |
Collapse
|
16
|
Göb CR, Ehnbom A, Sturm L, Tobe Y, Oppel IM. Supramolecular Metallacycles and Their Binding of Fullerenes. Chemistry 2020; 26:3609-3613. [PMID: 31833098 PMCID: PMC7155124 DOI: 10.1002/chem.201905390] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2019] [Indexed: 12/22/2022]
Abstract
The synthesis of a new triaminoguanidinium-based ligand with three tris-chelating [NNO]-binding pockets and C3 symmetry is described. The reaction of tris-(2-pyridinylene-N-oxide)triaminoguanidinium salts with zinc(II) formate leads to the formation of cyclic supramolecular coordination compounds which in solution bind fullerenes in their spherical cavities. The rapid encapsulation of C60 can be observed by NMR spectroscopy and single-crystal X-ray diffraction and is verified using computation.
Collapse
Affiliation(s)
- Christian R. Göb
- Institute of Inorganic ChemistryRWTH Aachen UniversityLandoltweg 152074AachenGermany
| | - Andreas Ehnbom
- Department of ChemistryTexas A&M UniversityP.O. Box 30012College StationTX77843-3012USA
| | - Lisa Sturm
- Institute of Inorganic ChemistryRWTH Aachen UniversityLandoltweg 152074AachenGermany
| | - Yoshito Tobe
- Division of Frontier Materials ScienceGraduate School of Engineering ScienceOsaka UniversityToyonakaOsaka560-8531Japan
| | - Iris M. Oppel
- Institute of Inorganic ChemistryRWTH Aachen UniversityLandoltweg 152074AachenGermany
| |
Collapse
|
17
|
Willems SB, Bunschoten A, Wagterveld RM, van Leeuwen FW, Velders AH. On-Flow Immobilization of Polystyrene Microspheres on β-Cyclodextrin-Patterned Silica Surfaces through Supramolecular Host-Guest Interactions. ACS APPLIED MATERIALS & INTERFACES 2019; 11:36221-36231. [PMID: 31487143 PMCID: PMC6778913 DOI: 10.1021/acsami.9b11069] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/24/2019] [Accepted: 09/05/2019] [Indexed: 06/10/2023]
Abstract
Species-specific isolation of microsized entities such as microplastics and resistant bacteria from waste streams is becoming a growing environmental challenge. By studying the on-flow immobilization of micron-sized polystyrene particles onto functionalized silica surfaces, we ascertain if supramolecular host-guest chemistry in aqueous solutions can provide an alternative technology for water purification. Polystyrene particles were modified with different degrees of adamantane (guest) molecules, and silica surfaces were patterned with β-cyclodextrin (β-CD, host) through microcontact printing (μCP). The latter was exposed to solutions of these particles flowing at different speeds, allowing us to study the effect of flow rate and multivalency on particle binding to the surface. The obtained binding profile was correlated with Comsol simulations. We also observed that particle binding is directly aligned with particle's ability to form host-guest interactions with the β-CD-patterned surface, as particle binding to the functionalized glass surface increased with higher adamantane load on the polystyrene particle surface. Because of the noncovalent character of these interactions, immobilization is reversible and modified β-CD surfaces can be recycled, which provides a positive outlook for their incorporation in water purification systems.
Collapse
Affiliation(s)
- Stan B.J. Willems
- Laboratory
of BioNanoTechnology, Wageningen University
and Research, Axis, Bornse
Weilanden 9, 6708 WG Wageningen, The Netherlands
- Interventional
Molecular Imaging Laboratory, Department of Radiology, Leiden University Medical Center, Albinusdreef 2, 2333
ZA Leiden, The Netherlands
- Wetsus,
European Centre of Excellence for Sustainable Water Technology, Oostergoweg 9, 8911 MA Leeuwarden, The Netherlands
| | - Anton Bunschoten
- Laboratory
of BioNanoTechnology, Wageningen University
and Research, Axis, Bornse
Weilanden 9, 6708 WG Wageningen, The Netherlands
- Interventional
Molecular Imaging Laboratory, Department of Radiology, Leiden University Medical Center, Albinusdreef 2, 2333
ZA Leiden, The Netherlands
| | - R. Martijn Wagterveld
- Wetsus,
European Centre of Excellence for Sustainable Water Technology, Oostergoweg 9, 8911 MA Leeuwarden, The Netherlands
| | - Fijs W.B. van Leeuwen
- Laboratory
of BioNanoTechnology, Wageningen University
and Research, Axis, Bornse
Weilanden 9, 6708 WG Wageningen, The Netherlands
- Interventional
Molecular Imaging Laboratory, Department of Radiology, Leiden University Medical Center, Albinusdreef 2, 2333
ZA Leiden, The Netherlands
| | - Aldrik H. Velders
- Laboratory
of BioNanoTechnology, Wageningen University
and Research, Axis, Bornse
Weilanden 9, 6708 WG Wageningen, The Netherlands
- Interventional
Molecular Imaging Laboratory, Department of Radiology, Leiden University Medical Center, Albinusdreef 2, 2333
ZA Leiden, The Netherlands
| |
Collapse
|
18
|
Blass J, Bozna B, Albrecht M, Wenz G, Bennewitz R. Molecular kinetics and cooperative effects in friction and adhesion of fast reversible bonds. Phys Chem Chem Phys 2019; 21:17170-17175. [PMID: 31342030 DOI: 10.1039/c9cp03350e] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Molecular mechanisms of adhesion and friction include the rupture of single and multiple bonds. The strength of adhesion and friction thus depends on the molecular kinetics and cooperative effects in the lifetime of bonds under stress. We measured the rate dependence of friction and adhesion mediated by supramolecular guest-host bonds using atomic force microscopy (AFM). The tip of the AFM and the surface were functionalized with cyclodextrin hosts. The influence of molecular kinetics on adhesion and friction was studied using three different ditopic guest molecules that connected the AFM tip and the surface. Adamantane, ferrocene, and azobenzene were the guest end groups of the connector molecules that formed inclusion complexes with the cyclodextrin hosts. The results confirm the importance of the molecular off-rate and of cooperative effects for the strength of adhesion and friction. Positive cooperativity also shapes the dependence of friction on the concentration of connector molecules, which follows the Hill-Langmuir model. Based on the Hill coefficient of 3.6, reflecting a characteristic rupture of at least 3-4 parallel bonds, a rescaling of the pulling rate is suggested that shifts the rate dependence of adhesion and friction for the three different molecules towards one master curve.
Collapse
Affiliation(s)
- Johanna Blass
- INM - Leibniz Institute for New Materials, Campus D2 2, 66123 Saarbrücken, Germany.
| | - Bianca Bozna
- INM - Leibniz Institute for New Materials, Campus D2 2, 66123 Saarbrücken, Germany.
| | - Marcel Albrecht
- Organic Macromolecular Chemistry, Saarland University, Campus C 4.2, 66123 Saarbrücken, Germany
| | - Gerhard Wenz
- Organic Macromolecular Chemistry, Saarland University, Campus C 4.2, 66123 Saarbrücken, Germany
| | - Roland Bennewitz
- INM - Leibniz Institute for New Materials, Campus D2 2, 66123 Saarbrücken, Germany.
| |
Collapse
|
19
|
Tang Q, Wang C, Xi Y, Huang Y, Tao Z. Host‐Guest Complexes of
l
‐Borneol with Cucurbituril and Cyclodextrin and Its Potential Use in Analysis of Drugs. ChemistrySelect 2019. [DOI: 10.1002/slct.201900913] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Qing Tang
- Department College of Tobacco ScienceGuizhou University Guiyang 550025 (P. R. China
- Key Laboratory of TobaccoQuality in Guizhou Province Guiyang 550025 (P. R. China
| | - Cheng‐Hui Wang
- Key Laboratory of Macrocyclic and Supramolecular Chemistry of Guizhou Province Guiyang 550025 (P. R. China
| | - Yun‐Yun Xi
- Key Laboratory of Macrocyclic and Supramolecular Chemistry of Guizhou Province Guiyang 550025 (P. R. China
| | - Ying Huang
- The Engineering and Research Center for Southwest Bio-Pharmaceutical Resources of NationalEducation Ministry of China Guizhou University Guiyang 550025 (P. R. China
| | - Zhu Tao
- Key Laboratory of Macrocyclic and Supramolecular Chemistry of Guizhou Province Guiyang 550025 (P. R. China
| |
Collapse
|
20
|
Zhang F, Islam MS, Berry RM, Tam KC. β-Cyclodextrin-Functionalized Cellulose Nanocrystals and Their Interactions with Surfactants. ACS OMEGA 2019; 4:2102-2110. [PMID: 31459458 PMCID: PMC6648498 DOI: 10.1021/acsomega.8b02534] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/26/2018] [Accepted: 01/10/2019] [Indexed: 05/30/2023]
Abstract
β-cyclodextrin (β-CD) forms a host-guest inclusion complex with many organic and amphiphilic compounds found in pharmaceutical, textile, cosmetic, food, and personal care systems. Therefore, grafting of β-CD onto a cellulose nanocrystal (CNC) offers a possible strategy to use functionalized CNC to complex with surface-active molecules. We have successfully grafted β-CD onto CNCs in a stepwise manner using cyanuric chloride as the linker. The structure of β-CD-grafted CNC (CNC-CD) was characterized by UV-vis and Fourier-transform infrared spectroscopy, and the grafting ratio of β-CD was determined by the phenolphthalein inclusion protocol. Ionic surfactants induced the aggregation of CNC-CDs by forming inclusion complexes with β-CDs on the surface of CNC. The interactions of amphiphilic compounds with CNC-CD were examined by surface tensiometry, conductometric and potentiometric titration, and isothermal titration calorimetry. Mechanisms describing the complex formation between surfactants and CNC-CD were proposed, where an improved understanding of CD interactions with surfactants and lipids would enable better strategies for drug encapsulation and delivery with CDs.
Collapse
Affiliation(s)
- Feifei Zhang
- Department
of Chemical Engineering, Waterloo Institute for Nanotechnology, University of Waterloo, 200 University Avenue West, Waterloo, Ontario N2L
3G1, Canada
| | - Muhammad Shahidul Islam
- Department
of Chemical Engineering, Waterloo Institute for Nanotechnology, University of Waterloo, 200 University Avenue West, Waterloo, Ontario N2L
3G1, Canada
| | - Richard M. Berry
- CelluForce
Inc., 625, Président-Kennedy
Avenue, Montreal, Québec H3A 1K2, Canada
| | - Kam Chiu Tam
- Department
of Chemical Engineering, Waterloo Institute for Nanotechnology, University of Waterloo, 200 University Avenue West, Waterloo, Ontario N2L
3G1, Canada
| |
Collapse
|
21
|
Schwarz DH, Elgaher WAM, Hollemeyer K, Hirsch AKH, Wenz G. Reversible immobilization of a protein to a gold surface through multiple host–guest interactions. J Mater Chem B 2019; 7:6148-6155. [DOI: 10.1039/c9tb00560a] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
Monolayers were formed by specific interactions between adamantylated proteins (transferrin, lysozyme) and a β-cyclodextrin (β-CD) monolayer on a gold surface.
Collapse
Affiliation(s)
- Dennis H. Schwarz
- Organic Macromolecular Chemistry
- Saarland University
- Saarbrücken
- Germany
| | - Walid A. M. Elgaher
- Helmholtz Institute for Pharmaceutical Research Saarland (HIPS) – Helmholtz Centre for Infection Research (HZI)
- Department of Drug Design and Optimization
- Saarbrücken
- Germany
| | | | - Anna K. H. Hirsch
- Helmholtz Institute for Pharmaceutical Research Saarland (HIPS) – Helmholtz Centre for Infection Research (HZI)
- Department of Drug Design and Optimization
- Saarbrücken
- Germany
- Department of Pharmacy
| | - Gerhard Wenz
- Organic Macromolecular Chemistry
- Saarland University
- Saarbrücken
- Germany
| |
Collapse
|
22
|
Datz S, Illes B, Gößl D, Schirnding CV, Engelke H, Bein T. Biocompatible crosslinked β-cyclodextrin nanoparticles as multifunctional carriers for cellular delivery. NANOSCALE 2018; 10:16284-16292. [PMID: 30128442 DOI: 10.1039/c8nr02462f] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Nanoparticle-based biomedicine has received enormous attention for theranostic applications, as these systems are expected to overcome several drawbacks of conventional therapy. Herein, effective and controlled drug delivery systems with on-demand release abilities and biocompatible properties are used as a versatile and powerful class of nanocarriers. We report the synthesis of a novel biocompatible and multifunctional material, entirely consisting of covalently crosslinked organic molecules. Specifically, β-cyclodextrin (CD) precursors were crosslinked with rigid organic linker molecules to obtain small (∼150 nm), thermally stable and highly water-dispersible nanoparticles with an accessible pore system containing β-CD rings. The nanoparticles can be covalently labeled with dye molecules to allow effective tracking in in vitro cell experiments. Rapid sugar-mediated cell-uptake kinetics were observed with HeLa cells, revealing exceptional particle uptake within only 30 minutes. Additionally, the particles could be loaded with different cargo molecules showing pH-responsive release behavior. Successful nuclei staining with Hoechst 33342 dye and effective cell killing with doxorubicin cargo molecules were demonstrated in live-cell experiments, respectively. This novel nanocarrier concept provides a promising platform for the development of controllable and highly biocompatible theranostic systems.
Collapse
Affiliation(s)
- Stefan Datz
- Department of Chemistry, Nanosystems Initiative Munich (NIM), Center for Nano Science (CeNS), University of Munich (LMU), Butenandtstr. 5-13, 81377 Munich, Germany.
| | | | | | | | | | | |
Collapse
|
23
|
Dunlop A, Bowman K, Aarstad O, Skjåk-Bræk G, Stokke BT, Round AN. Polymer sequencing by molecular machines: a framework for predicting the resolving power of a sliding contact force spectroscopy sequencing method. NANOSCALE 2017; 9:15089-15097. [PMID: 28967943 DOI: 10.1039/c7nr03358c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
We evaluate an AFM-based single molecule force spectroscopy method for mapping sequences in otherwise difficult to sequence heteropolymers, including glycosylated proteins and glycans. The sliding contact force spectroscopy (SCFS) method exploits a sliding contact made between a nanopore threaded over a polymer axle and an AFM probe. We find that for sliding α- and β-cyclodextrin nanopores over a wide range of hydrophilic monomers, the free energy of sliding is proportional to the sum of two dimensionless, easily calculable parameters representing the relative partitioning of the monomer inside the nanopore or in the aqueous phase, and the friction arising from sliding the nanopore over the monomer. Using this relationship we calculate sliding energies for nucleic acids, amino acids, glycan and synthetic monomers and predict on the basis of these calculations that SCFS will detect N- and O-glycosylation of proteins and patterns of sidechains in glycans. For these applications, SCFS offers an alternative to sequence mapping by mass spectrometry or newly-emerging nanopore technologies that may be easily implemented using a standard AFM.
Collapse
Affiliation(s)
- Alex Dunlop
- HH Wills Physics Laboratory, University of Bristol, Tyndall Avenue, Bristol BS8 1TL, UK
| | | | | | | | | | | |
Collapse
|
24
|
Méndez-Ardoy A, Steentjes T, Boukamp BA, Jonkheijm P, Kudernac T, Huskens J. Electron-Transfer Rates in Host-Guest Assemblies at β-Cyclodextrin Monolayers. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2017; 33:8614-8623. [PMID: 28013541 DOI: 10.1021/acs.langmuir.6b03860] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
The effect of the distance between a β-cyclodextrin (βCD) host core and a conductive substrate on the electron-transfer rate of complexed guests as well as of free-diffusing electrochemically active probes has been studied. First we have evaluated a set of short-tethered βCD adsorbates bearing different anchoring groups in order to get a reliable platform for the study of short-distance electron transfer. An electrochemically active trivalent guest was immobilized on these host monolayers in a selective and reversible manner, providing information about the packing density. Iodine- and nitrile-functionalized βCD monolayers gave coverages close to maximum packing. Electron transfer in the presence of Fe(CN)63-/4- studied by impedance spectroscopy revealed that the electron transfer of the diffusing probe was 3 orders of magnitude faster than when the βCD cores were separated from the surface by undecyl chains. When an electrochemically active guest was immobilized on the surface, electron-transfer rate measurements by cyclic voltammetry and capacitance spectroscopy showed differences of up to a factor of 8 for different βCD monolayers. These results suggest that increasing the distance between the βCD core and the underlying conductive substrate leads to a diminishing of the electron-transfer rate.
Collapse
Affiliation(s)
- Alejandro Méndez-Ardoy
- Molecular Nanofabrication Group and ‡Inorganic Materials Science Group, Department of Science and Technology, MESA+ Institute for Nanotechnology, University of Twente , P.O. Box 217, 7500 AE Enschede, The Netherlands
| | - Tom Steentjes
- Molecular Nanofabrication Group and ‡Inorganic Materials Science Group, Department of Science and Technology, MESA+ Institute for Nanotechnology, University of Twente , P.O. Box 217, 7500 AE Enschede, The Netherlands
| | - Bernard A Boukamp
- Molecular Nanofabrication Group and ‡Inorganic Materials Science Group, Department of Science and Technology, MESA+ Institute for Nanotechnology, University of Twente , P.O. Box 217, 7500 AE Enschede, The Netherlands
| | - Pascal Jonkheijm
- Molecular Nanofabrication Group and ‡Inorganic Materials Science Group, Department of Science and Technology, MESA+ Institute for Nanotechnology, University of Twente , P.O. Box 217, 7500 AE Enschede, The Netherlands
| | - Tibor Kudernac
- Molecular Nanofabrication Group and ‡Inorganic Materials Science Group, Department of Science and Technology, MESA+ Institute for Nanotechnology, University of Twente , P.O. Box 217, 7500 AE Enschede, The Netherlands
| | - Jurriaan Huskens
- Molecular Nanofabrication Group and ‡Inorganic Materials Science Group, Department of Science and Technology, MESA+ Institute for Nanotechnology, University of Twente , P.O. Box 217, 7500 AE Enschede, The Netherlands
| |
Collapse
|
25
|
Liu Q, Zuo F, Zhao Z, Chen J, Xu D. Molecular dynamics investigations of an indicator displacement assay mechanism in a liquid crystal sensor. Phys Chem Chem Phys 2017; 19:23924-23933. [DOI: 10.1039/c7cp02292a] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Molecular dynamic simulations were applied to address the binding competition mechanism in an IDA based LC sensor system.
Collapse
Affiliation(s)
- Qingyu Liu
- College of Chemistry and Environment Protection Engineering
- SouthWest University for Nationalities
- Chengdu
- P. R. China
| | - Fang Zuo
- College of Chemistry and Environment Protection Engineering
- SouthWest University for Nationalities
- Chengdu
- P. R. China
| | - Zhigang Zhao
- College of Chemistry and Environment Protection Engineering
- SouthWest University for Nationalities
- Chengdu
- P. R. China
| | - Junxian Chen
- College of Chemistry and Environment Protection Engineering
- SouthWest University for Nationalities
- Chengdu
- P. R. China
| | - Dingguo Xu
- MOE Key Laboratory of Green Chemistry and Technology
- College of Chemistry
- Sichuan University
- P. R. China
| |
Collapse
|
26
|
Blass J, Albrecht M, Wenz G, Zang YN, Bennewitz R. Single-molecule force spectroscopy of fast reversible bonds. Phys Chem Chem Phys 2017; 19:5239-5245. [DOI: 10.1039/c6cp07532k] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Cantilever stiffness dominates AFM force spectroscopy of fast reversible bonds. Fast rebinding and fluctuations of compliant linkers are averaged by the slow dynamics of the cantilever.
Collapse
Affiliation(s)
- Johanna Blass
- INM – Leibniz Institute for New Materials and Physics Department
- Saarland University
- 66123 Saabrücken
- Germany
| | - Marcel Albrecht
- Organic Macromolecular Chemistry
- Saarland University
- 66123 Saabrücken
- Germany
| | - Gerhard Wenz
- Organic Macromolecular Chemistry
- Saarland University
- 66123 Saabrücken
- Germany
| | - Yan Nan Zang
- Organic Macromolecular Chemistry
- Saarland University
- 66123 Saabrücken
- Germany
| | - Roland Bennewitz
- INM – Leibniz Institute for New Materials and Physics Department
- Saarland University
- 66123 Saabrücken
- Germany
| |
Collapse
|
27
|
Zhang H, Yin C, Yan H, van der Spoel D. Evaluation of Generalized Born Models for Large Scale Affinity Prediction of Cyclodextrin Host–Guest Complexes. J Chem Inf Model 2016; 56:2080-2092. [DOI: 10.1021/acs.jcim.6b00418] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Haiyang Zhang
- Department
of Biological Science and Engineering, School of Chemistry and Biological
Engineering, University of Science and Technology Beijing, 100083 Beijing, China
| | - Chunhua Yin
- Department
of Biological Science and Engineering, School of Chemistry and Biological
Engineering, University of Science and Technology Beijing, 100083 Beijing, China
| | - Hai Yan
- Department
of Biological Science and Engineering, School of Chemistry and Biological
Engineering, University of Science and Technology Beijing, 100083 Beijing, China
| | - David van der Spoel
- Uppsala
Center for Computational Chemistry, Science for Life Laboratory, Department
of Cell and Molecular Biology, Uppsala University, Husargatan 3, Box
596, SE-75124 Uppsala, Sweden
| |
Collapse
|
28
|
|
29
|
Guo Z, Liu Y, Xiao Q, Schönherr H, Zhang X. Modeling the Interaction between AFM Tips and Pinned Surface Nanobubbles. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2016; 32:751-8. [PMID: 26751634 DOI: 10.1021/acs.langmuir.5b04162] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
Although the morphology of surface nanobubbles has been studied widely with different AFM modes, AFM images may not reflect the real shapes of the nanobubbles due to AFM tip-nanobubble interactions. In addition, the interplay between surface nanobubble deformation and induced capillary force has not been well understood in this context. In our work we used constraint lattice density functional theory to investigate the interaction between AFM tips and pinned surface nanobubbles systematically, especially concentrating on the effects of tip hydrophilicity and shape. For a hydrophilic tip contacting a nanobubble, its hydrophilic nature facilitates its departure from the bubble surface, displaying a weak and intermediate-range attraction. However, when the tip squeezes the nanobubble during the approach process, the nanobubble shows an elastic effect that prevents the tip from penetrating the bubble, leading to a strong nanobubble deformation and repulsive interactions. On the contrary, a hydrophobic tip can easily pierce the vapor-liquid interface of the nanobubble during the approach process, leading to the disappearance of the repulsive force. In the retraction process, however, the adhesion between the tip and the nanobubble leads to a much stronger lengthening effect on nanobubble deformation and a strong long-range attractive force. The trends of force evolution from our simulations agree qualitatively well with recent experimental AFM observations. This favorable agreement demonstrates that our model catches the main intergradient of tip-nanobubble interactions for pinned surface nanobubbles and may therefore provide important insight into how to design minimally invasive AFM experiments.
Collapse
Affiliation(s)
- Zhenjiang Guo
- State Key Laboratory of Organic-Inorganic Composites, Beijing University of Chemical Technology , Beijing 100029, China
| | - Yawei Liu
- State Key Laboratory of Organic-Inorganic Composites, Beijing University of Chemical Technology , Beijing 100029, China
| | - Qianxiang Xiao
- State Key Laboratory of Organic-Inorganic Composites, Beijing University of Chemical Technology , Beijing 100029, China
| | - Holger Schönherr
- Physical Chemistry I, Department of Chemistry and Biology & Research Center of Micro and Nanochemistry and Engineering (Cμ), University of Siegen , Adolf-Reichwein-Str. 2, 57076 Siegen, Germany
| | - Xianren Zhang
- State Key Laboratory of Organic-Inorganic Composites, Beijing University of Chemical Technology , Beijing 100029, China
| |
Collapse
|
30
|
Ding L, Song W, Jiang R, Zhu L. A straightforward approach for one-pot synthesis of noncovalently connected graft copolymers with unique self-assembly nanostructures. Polym Chem 2016. [DOI: 10.1039/c6py01509c] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Noncovalently connected polymers were prepared by one-pot efficient host–guest complexation between β-CD and adamantane moieties followed by acyclic diene metathesis polymerization or carried out simultaneously, and further self-assembled into supramolecular nanostructures with diverse morphologies.
Collapse
Affiliation(s)
- Liang Ding
- Department of Polymer and Composite Material
- School of Materials Engineering
- Yancheng Institute of Technology
- Yancheng
- China
| | - Wei Song
- Department of Polymer and Composite Material
- School of Materials Engineering
- Yancheng Institute of Technology
- Yancheng
- China
| | - Ruiyu Jiang
- Department of Polymer and Composite Material
- School of Materials Engineering
- Yancheng Institute of Technology
- Yancheng
- China
| | - Lei Zhu
- College of Chemistry and Materials Science
- Hubei Engineering University
- Hubei
- China
| |
Collapse
|
31
|
Zhang H, Tan T, van der Spoel D. Generalized Born and Explicit Solvent Models for Free Energy Calculations in Organic Solvents: Cyclodextrin Dimerization. J Chem Theory Comput 2015; 11:5103-13. [DOI: 10.1021/acs.jctc.5b00620] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Haiyang Zhang
- Department of Biological Science and Engineering,
School of Chemistry and Biological Engineering, University of Science and Technology Beijing, 100083 Beijing, China
- Beijing Key Laboratory of Bioprocess, Department of Biochemical
Engineering, Beijing University of Chemical Technology, Box 53, 100029 Beijing, China
| | - Tianwei Tan
- Beijing Key Laboratory of Bioprocess, Department of Biochemical
Engineering, Beijing University of Chemical Technology, Box 53, 100029 Beijing, China
| | - David van der Spoel
- Uppsala Center for
Computational Chemistry, Science for Life Laboratory, Department of
Cell and Molecular Biology, Uppsala University, Husargatan 3, Box
596, SE-75124 Uppsala, Sweden
| |
Collapse
|
32
|
Bauer M, Kékicheff P, Iss J, Fajolles C, Charitat T, Daillant J, Marques CM. Sliding tethered ligands add topological interactions to the toolbox of ligand-receptor design. Nat Commun 2015; 6:8117. [PMID: 26350224 PMCID: PMC4579401 DOI: 10.1038/ncomms9117] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2014] [Accepted: 07/21/2015] [Indexed: 11/26/2022] Open
Abstract
Adhesion in the biological realm is mediated by specific lock-and-key interactions between ligand-receptor pairs. These complementary moieties are ubiquitously anchored to substrates by tethers that control the interaction range and the mobility of the ligands and receptors, thus tuning the kinetics and strength of the binding events. Here we add sliding anchoring to the toolbox of ligand-receptor design by developing a family of tethered ligands for which the spacer can slide at the anchoring point. Our results show that this additional sliding degree of freedom changes the nature of the adhesive contact by extending the spatial range over which binding may sustain a significant force. By introducing sliding tethered ligands with self-regulating length, this work paves the way for the development of versatile and reusable bio-adhesive substrates with potential applications for drug delivery and tissue engineering.
Collapse
Affiliation(s)
- Martin Bauer
- Institut Charles Sadron, Université de Strasbourg, CNRS-UPR 22, 67034 Strasbourg Cedex, France
- CEA/ IRAMIS/SIS2M/LIONS, UMR 3299 CEA/CNRS, CEA-Saclay bâtiment 125, 91191 Gif-sur-Yvette Cedex, France
| | - Patrick Kékicheff
- Institut Charles Sadron, Université de Strasbourg, CNRS-UPR 22, 67034 Strasbourg Cedex, France
| | - Jean Iss
- Institut Charles Sadron, Université de Strasbourg, CNRS-UPR 22, 67034 Strasbourg Cedex, France
| | - Christophe Fajolles
- CEA/ IRAMIS/SIS2M/LIONS, UMR 3299 CEA/CNRS, CEA-Saclay bâtiment 125, 91191 Gif-sur-Yvette Cedex, France
| | - Thierry Charitat
- Institut Charles Sadron, Université de Strasbourg, CNRS-UPR 22, 67034 Strasbourg Cedex, France
| | - Jean Daillant
- CEA/ IRAMIS/SIS2M/LIONS, UMR 3299 CEA/CNRS, CEA-Saclay bâtiment 125, 91191 Gif-sur-Yvette Cedex, France
| | - Carlos M. Marques
- Institut Charles Sadron, Université de Strasbourg, CNRS-UPR 22, 67034 Strasbourg Cedex, France
| |
Collapse
|
33
|
Blass J, Albrecht M, Bozna BL, Wenz G, Bennewitz R. Dynamic effects in friction and adhesion through cooperative rupture and formation of supramolecular bonds. NANOSCALE 2015; 7:7674-7681. [PMID: 25833225 DOI: 10.1039/c5nr00329f] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
We introduce a molecular toolkit for studying the dynamics in friction and adhesion from the single molecule level to effects of multivalency. As experimental model system we use supramolecular bonds established by the inclusion of ditopic adamantane connector molecules into two surface-bound cyclodextrin molecules, attached to a tip of an atomic force microscope (AFM) and to a flat silicon surface. The rupture force of a single bond does not depend on the pulling rate, indicating that the fast complexation kinetics of adamantane and cyclodextrin are probed in thermal equilibrium. In contrast, the pull-off force for a group of supramolecular bonds depends on the unloading rate revealing a non-equilibrium situation, an effect discussed as the combined action of multivalency and cantilever inertia effects. Friction forces exhibit a stick-slip characteristic which is explained by the cooperative rupture of groups of host-guest bonds and their rebinding. No dependence of friction on the sliding velocity has been observed in the accessible range of velocities due to fast rebinding and the negligible delay of cantilever response in AFM lateral force measurements.
Collapse
Affiliation(s)
- Johanna Blass
- INM - Leibniz Institute of New Materials, Campus D2 2, Saarland University, 66123 Saarbrücken, Germany.
| | | | | | | | | |
Collapse
|
34
|
Cao M, Deng L, Xu H. Study of PNA–DNA hybridization by AFM-based single-molecule force spectroscopy. Colloids Surf A Physicochem Eng Asp 2015. [DOI: 10.1016/j.colsurfa.2015.01.063] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
|
35
|
Cheng B, Cui S. Supramolecular Chemistry and Mechanochemistry of Macromolecules: Recent Advances by Single-Molecule Force Spectroscopy. Top Curr Chem (Cham) 2015; 369:97-134. [DOI: 10.1007/128_2015_628] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
|
36
|
Blass J, Bozna BL, Albrecht M, Krings JA, Ravoo BJ, Wenz G, Bennewitz R. Switching adhesion and friction by light using photosensitive guest–host interactions. Chem Commun (Camb) 2015; 51:1830-3. [DOI: 10.1039/c4cc09204j] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Friction and adhesion between two β-cyclodextrin functionalized surfaces can be switched reversibly by external light stimuli. The interaction is mediated by complexation with ditopic azobenzene guest molecules.
Collapse
Affiliation(s)
- Johanna Blass
- INM - Leibniz-Institute for New Materials
- Saarland University
- 66123 Saarbrücken
- Germany
- Physics Department
| | - Bianca L. Bozna
- INM - Leibniz-Institute for New Materials
- Saarland University
- 66123 Saarbrücken
- Germany
| | - Marcel Albrecht
- Organic Macromolecular Chemistry
- Saarland University
- 66123 Saarbrücken
- Germany
| | | | - Bart Jan Ravoo
- Organic Chemistry Institute
- University of Münster
- 48149 Münster
- Germany
| | - Gerhard Wenz
- Organic Macromolecular Chemistry
- Saarland University
- 66123 Saarbrücken
- Germany
| | - Roland Bennewitz
- INM - Leibniz-Institute for New Materials
- Saarland University
- 66123 Saarbrücken
- Germany
- Physics Department
| |
Collapse
|
37
|
Bacharouche J, Degardin M, Jierry L, Carteret C, Lavalle P, Hemmerlé J, Senger B, Auzély-Velty R, Boulmedais F, Boturyn D, Coche-Guérente L, Schaaf P, Francius G. Multivalency: influence of the residence time and the retraction rate on rupture forces measured by AFM. J Mater Chem B 2015; 3:1801-1812. [DOI: 10.1039/c4tb01261e] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Molecular orientation and flexibility of β-CD modulate the contact time and the multivalence effects of specific host–guest interactions.
Collapse
|
38
|
Gade M, Paul A, Alex C, Choudhury D, Thulasiram HV, Kikkeri R. Supramolecular scaffolds on glass slides as sugar based rewritable sensors for bacteria. Chem Commun (Camb) 2015; 51:6346-9. [DOI: 10.1039/c5cc01019e] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
We describe here the sugar functionalized β-cyclodextrin–ferrocene glass slides as fully reversible bacterial biosensors under the influence of external adamantane carboxylic acid.
Collapse
Affiliation(s)
- Madhuri Gade
- Indian Institute of Science Education and Research
- Pune 411008
- India
| | - Ajay Paul
- Chemical Biology Unit
- Division of Organic chemistry
- CSIR-National Chemical Laboratory
- Pune-411008
- India
| | - Catherine Alex
- Indian Institute of Science Education and Research
- Pune 411008
- India
| | - Devika Choudhury
- Department of Energy Science and Engineering
- IIT Bombay
- Mumbai-400076
- India
| | | | | |
Collapse
|
39
|
Stereoselective inclusion mechanism of ketoprofen into β-cyclodextrin: insights from molecular dynamics simulations and free energy calculations. Theor Chem Acc 2014. [DOI: 10.1007/s00214-014-1556-8] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
|
40
|
Filippini G, Bonal C, Malfreyt P. How does the dehydration change the host-guest association under homogeneous and heterogeneous conditions? Phys Chem Chem Phys 2014; 16:8667-74. [PMID: 24676343 DOI: 10.1039/c4cp00108g] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
In this study, the thermodynamic properties of association of some inorganic ions (ClO4(-) and SO4(2-)) with β-cyclodextrins (β-CD) in aqueous solution are determined under both free β-CD and surface confined β-CD conditions using atomistic simulations. The potential of mean force (PMF) is calculated as a function of the environment and the thermodynamic properties of association are deduced by integrating the free energy profiles. No inclusion complex between SO4(2-) and β-CD is detected. Nevertheless, the PMF curve obtained for gold-confined CD seems to evidence a small minimum at a larger separation distance that shows specific interactions such as hydrogen bonding outside the cavity. As concerns ClO4(-), our simulations reveal the formation of an inclusion complex with free β-CD in perfect agreement with the available experimental results. Nevertheless, we do not detect any formation of the host-guest inclusion complex under heterogeneous conditions. Finally, the differences observed as a function of the anions are interpreted through an atomistic description. The general trend of weaker complex stabilities with the increasing free energy of hydration of the anions is found in homogeneous systems.
Collapse
Affiliation(s)
- G Filippini
- Clermont Université, Université Blaise Pascal, Institut de Chimie de Clermont-Ferrand, ICCF, CNRS, UMR 6296, BP 10448, F-63000 Clermont-Ferrand, France.
| | | | | |
Collapse
|
41
|
Mangiapia G, Sartorio R. 1:1 and 1:2 Inclusion Complexes of Di-tert-butyl l-tartrate with α-Cyclodextrin: A Diffusion Study. J SOLUTION CHEM 2014. [DOI: 10.1007/s10953-013-0124-5] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
|
42
|
Zhang H, Tan T, Hetényi C, van der Spoel D. Quantification of Solvent Contribution to the Stability of Noncovalent Complexes. J Chem Theory Comput 2013; 9:4542-51. [DOI: 10.1021/ct400404q] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Haiyang Zhang
- Beijing Key Laboratory
of Bioprocess, Department of Biochemical Engineering, Beijing University of Chemical Technology, Box 53, 100029 Beijing, China
- Science for Life
Laboratory, Department of Cell and Molecular Biology, Uppsala University, Husargatan
3, Box 596, SE-751 24 Uppsala, Sweden
| | - Tianwei Tan
- Beijing Key Laboratory
of Bioprocess, Department of Biochemical Engineering, Beijing University of Chemical Technology, Box 53, 100029 Beijing, China
| | - Csaba Hetényi
- Molecular Biophysics
Research Group, Hungarian Academy of Sciences, Pázmány sétány 1/C, H-1117 Budapest, Hungary
| | - David van der Spoel
- Science for Life
Laboratory, Department of Cell and Molecular Biology, Uppsala University, Husargatan
3, Box 596, SE-751 24 Uppsala, Sweden
| |
Collapse
|
43
|
Jana M, Bandyopadhyay S. Molecular Dynamics Study of β-Cyclodextrin–Phenylalanine (1:1) Inclusion Complex in Aqueous Medium. J Phys Chem B 2013; 117:9280-7. [DOI: 10.1021/jp404348u] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Madhurima Jana
- Molecular Simulation Laboratory,
Department of Chemistry, National Institute of Technology, Rourkela-769008, India
| | - Sanjoy Bandyopadhyay
- Molecular Modeling Laboratory,
Department of Chemistry, Indian Institute of Technology, Kharagpur-721302, India
| |
Collapse
|
44
|
Yang L, Gomez-Casado A, Young JF, Nguyen HD, Cabanas-Danés J, Huskens J, Brunsveld L, Jonkheijm P. Reversible and oriented immobilization of ferrocene-modified proteins. J Am Chem Soc 2012; 134:19199-206. [PMID: 23126430 DOI: 10.1021/ja308450n] [Citation(s) in RCA: 68] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Abstract
Adopting supramolecular chemistry for immobilization of proteins is an attractive strategy that entails reversibility and responsiveness to stimuli. The reversible and oriented immobilization and micropatterning of ferrocene-tagged yellow fluorescent proteins (Fc-YFPs) onto β-cyclodextrin (βCD) molecular printboards was characterized using surface plasmon resonance (SPR) spectroscopy and fluorescence microscopy in combination with electrochemistry. The proteins were assembled on the surface through the specific supramolecular host-guest interaction between βCD and ferrocene. Application of a dynamic covalent disulfide lock between two YFP proteins resulted in a switch from monovalent to divalent ferrocene interactions with the βCD surface, yielding a more stable protein immobilization. The SPR titration data for the protein immobilization were fitted to a 1:1 Langmuir-type model, yielding K(LM) = 2.5 × 10(5) M(-1) and K(i,s) = 1.2 × 10(3) M(-1), which compares favorably to the intrinsic binding constant presented in the literature for the monovalent interaction of ferrocene with βCD self-assembled monolayers. In addition, the SPR binding experiments were qualitatively simulated, confirming the binding of Fc-YFP in both divalent and monovalent fashion to the βCD monolayers. The Fc-YFPs could be patterned on βCD surfaces in uniform monolayers, as revealed using fluorescence microscopy and atomic force microscopy measurements. Both fluorescence microscopy imaging and SPR measurements were carried out with the in situ capability to perform cyclic voltammetry and chronoamperometry. These studies emphasize the repetitive desorption and adsorption of the ferrocene-tagged proteins from the βCD surface upon electrochemical oxidation and reduction, respectively.
Collapse
Affiliation(s)
- Lanti Yang
- Molecular Nanofabrication Group, Department of Science and Technology, MESA+ Institute for Nanotechnology, University of Twente, P.O. Box 217, 7500 AE Enschede, The Netherlands
| | | | | | | | | | | | | | | |
Collapse
|
45
|
Ma X, Wei Z, Xiong X, Jiang Y, He J, Zhang S, Fang X, Zhang X. Gas-phase fragmentation of host–guest complexes between β-cyclodextrin and small molecules. Talanta 2012; 93:252-6. [DOI: 10.1016/j.talanta.2012.02.029] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2011] [Revised: 02/11/2012] [Accepted: 02/15/2012] [Indexed: 11/28/2022]
|
46
|
Song B, Schönherr H. Atomic Force Microscopy Measurements of Supramolecular Interactions. Supramol Chem 2012. [DOI: 10.1002/9780470661345.smc186] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
|
47
|
Maciaszek JL, Andemariam B, Huber G, Lykotrafitis G. Epinephrine modulates BCAM/Lu and ICAM-4 expression on the sickle cell trait red blood cell membrane. Biophys J 2012; 102:1137-43. [PMID: 22404936 DOI: 10.1016/j.bpj.2012.01.050] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2011] [Revised: 11/10/2011] [Accepted: 01/27/2012] [Indexed: 02/02/2023] Open
Abstract
Collapse and sudden death in physical training are the most serious complications of sickle cell trait (SCT). There is evidence that erythrocytes in SCT patients aggregate during strenuous exercise, likely because of adhesive interactions with the extracellular matrix (ECM) and endothelial cells, and because of their irregular viscoelastic properties. This results in inflammation, blood flow impairment, and vaso-occlusive events. However, the exact role of stress conditions and how they lead to these complications is virtually unknown. Using single-molecule atomic force microscopy experiments, we found that epinephrine, a hormone that is secreted under stressful conditions, increases both the frequency and strength of adhesion events between basal cell adhesion molecule (BCAM/Lu) and ECM laminin, and between intercellular adhesion molecule-4 (ICAM-4) and endothelial α(v)β(3), compared with nonstimulated SCT erythrocytes. Increases in adhesion frequency provide significant evidence of the role of epinephrine in BCAM/Lu-laminin and ICAM-4-α(v)β(3) bonding, and suggest mechanisms of vaso-occlusion during physical exertion in SCT.
Collapse
Affiliation(s)
- Jamie L Maciaszek
- Department of Mechanical Engineering, University of Connecticut, Storrs, Connecticut, USA
| | | | | | | |
Collapse
|
48
|
Kyllönen LEP, Chinuswamy V, Maffeo D, Kefalas ET, Haider JM, Pikramenou Z, Mavridis IM, Yannakopoulou K, Glezos N. Electronic transport between Au surface and scanning tunnelling microscope tip via a multipodal cyclodextrin host-metallo-guest supramolecular system. J PHYS ORG CHEM 2012. [DOI: 10.1002/poc.1889] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Lasse E. P. Kyllönen
- Institute of Physical Chemistry; National Center for Scientific Research ‘Demokritos’; Athens Greece
- School of Chemistry; The University of Birmingham; Edgbaston B15 2TT UK
| | - Viswanathan Chinuswamy
- Institute of Microelectronics; National Center for Scientific Research ‘Demokritos’; Athens Greece
| | - Davide Maffeo
- Institute of Physical Chemistry; National Center for Scientific Research ‘Demokritos’; Athens Greece
| | | | - Johanna M. Haider
- School of Chemistry; The University of Birmingham; Edgbaston B15 2TT UK
| | - Zoe Pikramenou
- School of Chemistry; The University of Birmingham; Edgbaston B15 2TT UK
| | - Irene M. Mavridis
- Institute of Physical Chemistry; National Center for Scientific Research ‘Demokritos’; Athens Greece
| | - Konstantina Yannakopoulou
- Institute of Physical Chemistry; National Center for Scientific Research ‘Demokritos’; Athens Greece
| | - Nikos Glezos
- Institute of Microelectronics; National Center for Scientific Research ‘Demokritos’; Athens Greece
| |
Collapse
|
49
|
Filippini G, Bonal C, Malfreyt P. Why is the association of supramolecular assemblies different under homogeneous and heterogeneous conditions? Phys Chem Chem Phys 2012; 14:10122-4. [DOI: 10.1039/c2cp41661a] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
|
50
|
Walhorn V, Schäfer C, Schröder T, Mattay J, Anselmetti D. Functional characterization of a supramolecular affinity switch at the single molecule level. NANOSCALE 2011; 3:4859-4865. [PMID: 22009325 DOI: 10.1039/c1nr10912j] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
Surface-immobilized and switchable resorcin[4]arene receptor molecules were quantitatively investigated with atomic force microscopy (AFM) and AFM-single molecule force spectroscopy (AFM-SMFS). The upper rim of the supramolecular receptor cavities was modified with two photodimerizable anthracene moieties. The molecular constitution can be externally switched and controlled by exposure to ultraviolet (UV) light and heat. The topography as well as the complexation affinity against small ammonium guest ions of the two isomers were investigated at the single molecule level. Our results demonstrate the feasibility to externally control the supramolecular receptor's affinity and simultaneously quantify and associate these binding properties with the structural change of the resorcin[4]arenes structure on the basis of the measured molecule corrugation height.
Collapse
Affiliation(s)
- Volker Walhorn
- Experimental Biophysics and Applied Nanoscience, Department of Physics, Bielefeld University, Universitätsstraße 25, 33615, Bielefeld, Germany
| | | | | | | | | |
Collapse
|