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Sonego JM, de Diego SI, Szajnman SH, Gallo-Rodriguez C, Rodriguez JB. Organoselenium Compounds: Chemistry and Applications in Organic Synthesis. Chemistry 2023; 29:e202300030. [PMID: 37378970 DOI: 10.1002/chem.202300030] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2023] [Revised: 06/18/2023] [Accepted: 06/28/2023] [Indexed: 06/29/2023]
Abstract
Selenium, originally described as a toxin, turns out to be a crucial trace element for life that appears as selenocysteine and its dimer, selenocystine. From the point of view of drug developments, selenium-containing drugs are isosteres of sulfur and oxygen with the advantage that the presence of the selenium atom confers antioxidant properties and high lipophilicity, which would increase cell membrane permeation leading to better oral bioavailability. In this article, we have focused on the relevant features of the selenium atom, above all, the corresponding synthetic approaches to access a variety of organoselenium molecules along with the proposed reaction mechanisms. The preparation and biological properties of selenosugars, including selenoglycosides, selenonucleosides, selenopeptides, and other selenium-containing compounds will be treated. We have attempted to condense the most important aspects and interesting examples of the chemistry of selenium into a single article.
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Affiliation(s)
- Juan M Sonego
- Departamento de Química Orgánica Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, Pabellón 2, C1428EHA, Buenos Aires, Argentina
- CONICET-Universidad de Buenos Aires, Unidad de Microanálisis y Métodos Físicos en Química Orgánica (UMYMFOR), C1428EHA, Buenos Aires, Argentina
| | - Sheila I de Diego
- Departamento de Química Orgánica Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, Pabellón 2, C1428EHA, Buenos Aires, Argentina
- CONICET-Universidad de Buenos Aires, Unidad de Microanálisis y Métodos Físicos en Química Orgánica (UMYMFOR), C1428EHA, Buenos Aires, Argentina
| | - Sergio H Szajnman
- Departamento de Química Orgánica Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, Pabellón 2, C1428EHA, Buenos Aires, Argentina
- CONICET-Universidad de Buenos Aires, Unidad de Microanálisis y Métodos Físicos en Química Orgánica (UMYMFOR), C1428EHA, Buenos Aires, Argentina
| | - Carola Gallo-Rodriguez
- Departamento de Química Orgánica Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, Pabellón 2, C1428EHA, Buenos Aires, Argentina
- CONICET-Universidad de Buenos Aires, Centro de Investigaciones en Hidratos de Carbono (CIHIDECAR), C1428EHA, Buenos Aires, Argentina
| | - Juan B Rodriguez
- Departamento de Química Orgánica Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, Pabellón 2, C1428EHA, Buenos Aires, Argentina
- CONICET-Universidad de Buenos Aires, Unidad de Microanálisis y Métodos Físicos en Química Orgánica (UMYMFOR), C1428EHA, Buenos Aires, Argentina
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2
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Shen MH, Wang YJ, Wang Y, Zhou Y, Gu J, Liu XQ, Guo J, Ouyang M, Deng L, Xu HD. α-Vinyl azide–cysteine click coupling reaction enabled bioorthogonal peptide/protein modification. Org Chem Front 2022. [DOI: 10.1039/d2qo00736c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
α-Alkyl and α-aryl vinyl azides were found to be able to couple with cysteine-derived alkyl thiols chemoselectively under mild conditions, providing the corresponding β-ketosulfides with simultaneous extrusion of N2 and ammonia.
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Affiliation(s)
- Mei-Hua Shen
- School of Pharmacy, Changzhou University, Changzhou, Jiangsu Province, 213164, China
| | - Yu-Jiao Wang
- School of Pharmacy, Changzhou University, Changzhou, Jiangsu Province, 213164, China
| | - Yong Wang
- School of Pharmacy, Changzhou University, Changzhou, Jiangsu Province, 213164, China
| | - Ying Zhou
- School of Pharmacy, Changzhou University, Changzhou, Jiangsu Province, 213164, China
| | - Jie Gu
- School of Pharmacy, Changzhou University, Changzhou, Jiangsu Province, 213164, China
| | - Xiao-Qian Liu
- School of Pharmacy, Changzhou University, Changzhou, Jiangsu Province, 213164, China
| | - Jia Guo
- Institute of Biomedical Engineering and Health Sciences, Changzhou University, Changzhou, Jiangsu Province, 213164, China
| | - Mingxing Ouyang
- Institute of Biomedical Engineering and Health Sciences, Changzhou University, Changzhou, Jiangsu Province, 213164, China
| | - Linhong Deng
- Institute of Biomedical Engineering and Health Sciences, Changzhou University, Changzhou, Jiangsu Province, 213164, China
| | - Hua-Dong Xu
- School of Pharmacy, Changzhou University, Changzhou, Jiangsu Province, 213164, China
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3
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Yamamoto E, Kawai Y, Takakura K, Kimura M, Murayama H, Matsueda H, Otsuki S, Sakata H, Tokunaga M. Convenient Unsymmetrical Disulfane Synthesis: Basic Zeolite‐Catalyzed Thiol‐Disulfane Exchange Reaction. ChemCatChem 2021. [DOI: 10.1002/cctc.202101092] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Eiji Yamamoto
- Department of Chemistry Graduate School of Science Kyushu University 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Yasutaka Kawai
- Department of Chemistry Graduate School of Science Kyushu University 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Kei Takakura
- Department of Chemistry Graduate School of Science Kyushu University 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Moemi Kimura
- Department of Chemistry Graduate School of Science Kyushu University 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Haruno Murayama
- Department of Chemistry Graduate School of Science Kyushu University 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Hironobu Matsueda
- Fine Synthesis Technical Div. 1 DIC Corporation 18 Higashifukashiba Kamisu Ibaraki 314-0193 Japan
| | - Shujiro Otsuki
- Fine Synthesis Technical Div. 1 DIC Corporation 18 Higashifukashiba Kamisu Ibaraki 314-0193 Japan
| | - Hiroshi Sakata
- Fine Synthesis Technical Div. 1 DIC Corporation 18 Higashifukashiba Kamisu Ibaraki 314-0193 Japan
| | - Makoto Tokunaga
- Department of Chemistry Graduate School of Science Kyushu University 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
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4
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de Araujo AD, Nguyen HT, Fairlie DP. Late-Stage Hydrocarbon Conjugation and Cyclisation in Synthetic Peptides and Proteins. Chembiochem 2021; 22:1784-1789. [PMID: 33506598 DOI: 10.1002/cbic.202000796] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2020] [Revised: 01/07/2021] [Indexed: 12/26/2022]
Abstract
The conventional S-alkylation of cysteine relies upon using activated electrophiles. Here we demonstrate high-yielding and selective S-alkylation and S-lipidation of cysteines in unprotected synthetic peptides and proteins by using weak electrophiles and a Zn2+ promoter. Linear or branched iodoalkanes can S-alkylate cysteine in an unprotected 38-residue Myc peptide fragment and in a 91-residue miniprotein Omomyc, thus highlighting selective late-stage synthetic modifications. Metal-assisted cysteine alkylation is also effective for incorporating dehydroalanine into unprotected peptides and for peptide cyclisation via aliphatic thioether crosslinks, including customising macrocycles to stabilise helical peptides for enhanced uptake and delivery to proteins inside cells. Chemoselective and efficient late-stage Zn2+ -promoted cysteine alkylation in unprotected peptides and proteins promises many useful applications.
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Affiliation(s)
- Aline D de Araujo
- ARC Centre of Excellence for Innovations in Peptide and Protein Science, Division of Chemistry and Structural Biology, Institute for Molecular Bioscience, The University of Queensland, Brisbane, QLD 4072, Australia
| | - Huy T Nguyen
- ARC Centre of Excellence for Innovations in Peptide and Protein Science, Division of Chemistry and Structural Biology, Institute for Molecular Bioscience, The University of Queensland, Brisbane, QLD 4072, Australia
| | - David P Fairlie
- ARC Centre of Excellence for Innovations in Peptide and Protein Science, Division of Chemistry and Structural Biology, Institute for Molecular Bioscience, The University of Queensland, Brisbane, QLD 4072, Australia
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5
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Kanemoto K, Furuhashi K, Morita Y, Komatsu T, Fukuzawa SI. Acid-Mediated Sulfonylthiolation of Arenes via Selective Activation of SS-Morpholino Dithiosulfonate. Org Lett 2021; 23:1582-1587. [PMID: 33513301 DOI: 10.1021/acs.orglett.0c04289] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A trifluoroacetic-acid-mediated desulfurilative sulfonylthiolation of arenes using SS-morpholino dithiosulfonate is described. This system is based on selective activation of the morpholino group over the tosyl group of the doubly transformable sulfur surrogate. Mechanistic studies suggested that the reaction proceeds through electrophilic aromatic substitution followed by sulfur extrusion. The wide substrate scope of this reaction and the transformability of the resulting thiosulfonates enable expeditious access to divergent multifunctionalized sulfides.
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Affiliation(s)
- Kazuya Kanemoto
- Faculty of Science and Engineering, Chuo University, 1-13-27 Kasuga Bunkyo-ku, Tokyo 112-8551, Japan
| | - Koudai Furuhashi
- Faculty of Science and Engineering, Chuo University, 1-13-27 Kasuga Bunkyo-ku, Tokyo 112-8551, Japan
| | - Yoshitsugu Morita
- Faculty of Science and Engineering, Chuo University, 1-13-27 Kasuga Bunkyo-ku, Tokyo 112-8551, Japan
| | - Teruyuki Komatsu
- Faculty of Science and Engineering, Chuo University, 1-13-27 Kasuga Bunkyo-ku, Tokyo 112-8551, Japan
| | - Shin-Ichi Fukuzawa
- Faculty of Science and Engineering, Chuo University, 1-13-27 Kasuga Bunkyo-ku, Tokyo 112-8551, Japan
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6
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Traverssi MG, Peñéñory AB, Varela O, Colomer JP. Photooxidation of thiosaccharides mediated by sensitizers in aerobic and environmentally friendly conditions. RSC Adv 2021; 11:9262-9273. [PMID: 35423421 PMCID: PMC8695230 DOI: 10.1039/d0ra09534f] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2020] [Accepted: 02/23/2021] [Indexed: 11/21/2022] Open
Abstract
A series of β-d-glucopyranosyl derivates have been synthesized and evaluated in photooxidation reactions promoted by visible light and mediated by organic dyes under aerobic conditions. Among the different photocatalysts employed, tetra-O-acetyl riboflavin afforded chemoselectively the respective sulfoxides, without over-oxidation to sulfones, in good to excellent yields and short reaction times. This new methodology for the preparation of synthetically useful glycosyl sulfoxides constitutes a catalytic, efficient, economical, and environmentally friendly oxidation process not reported so far for carbohydrates.
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Affiliation(s)
- Miqueas G Traverssi
- Departamento de Química Orgánica, Universidad Nacional de Córdoba, Facultad Ciencias Químicas, Ciudad Universitaria Edificio de Ciencias II Córdoba Argentina .,Instituto de Investigaciones en Fisico-Química de Córdoba (INFIQC), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), UNC Argentina
| | - Alicia B Peñéñory
- Departamento de Química Orgánica, Universidad Nacional de Córdoba, Facultad Ciencias Químicas, Ciudad Universitaria Edificio de Ciencias II Córdoba Argentina .,Instituto de Investigaciones en Fisico-Química de Córdoba (INFIQC), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), UNC Argentina
| | - Oscar Varela
- Departamento de Química Orgánica, Universidad de Buenos Aires, Facultad Ciencias Exactas y Naturales, Ciudad Universitaria Pab. 2, C1428EHA Buenos Aires Argentina.,Centro de Investigación en Hidratos de Carbono (CIHIDECAR), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), UBA Argentina
| | - Juan P Colomer
- Departamento de Química Orgánica, Universidad Nacional de Córdoba, Facultad Ciencias Químicas, Ciudad Universitaria Edificio de Ciencias II Córdoba Argentina .,Instituto de Investigaciones en Fisico-Química de Córdoba (INFIQC), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), UNC Argentina
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7
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Priest JD, Male L, Davies PW. Diastereoselective sulfur ylide rearrangements from gold catalyzed oxidation of ynamides. Tetrahedron 2021. [DOI: 10.1016/j.tet.2020.131757] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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8
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Hamsath A, Xian M. Chemistry and Chemical Biology of Selenenyl Sulfides and Thioseleninic Acids. Antioxid Redox Signal 2020; 33:1143-1157. [PMID: 32151152 PMCID: PMC7698873 DOI: 10.1089/ars.2020.8083] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/02/2020] [Accepted: 03/04/2020] [Indexed: 12/14/2022]
Abstract
Significance: Selenenyl sulfides (RSeSRs) and thioseleninic acids (RSeSHs) are the monoselenium (Se) analogs of disulfides and persulfides that contain Se-S bonds. These bonds are found in several antioxidant-regenerating enzymes as derivatives of selenocysteine, making them an important player in redox biology as it pertains to sulfur redox regulation. Recent Advances: Mechanistic studies of redox-regulating selenoenzymes such as thioredoxin reductase and glutathione peroxidase suggest crucial Se-S bonds in the active sites. Peptide models and small-molecule mimics of these active sites have been prepared to study their fundamental chemistry. These advances help pave the road to better understand the functions of the Se-S bond in the body. Critical Issues: The Se-S bond is unstable at atmospheric temperatures and pressures. Therefore, studying their properties proposes a major challenge. Currently, there are no trapping reagents specific to RSeSRs or RSeSHs, making their presence, identity, and fates in biological environments difficult to track. Future Directions: Further understanding of the fundamental chemistry/biochemistry of RSeSRs and RSeSHs is needed to understand what their intracellular targets are and to what extent they impact signaling. Besides antioxidant regeneration and peroxide radical reduction, the roles of RSeSR and RSeSHs in other systems need to be further explored.
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Affiliation(s)
- Akil Hamsath
- Department of Chemistry, Washington State University, Pullman, Washington, USA
| | - Ming Xian
- Department of Chemistry, Washington State University, Pullman, Washington, USA
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9
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Clements JL, Pohl F, Muthupandi P, Rogers SC, Mao J, Doctor A, Birman VB, Held JM. A clickable probe for versatile characterization of S-nitrosothiols. Redox Biol 2020; 37:101707. [PMID: 32916549 PMCID: PMC7490559 DOI: 10.1016/j.redox.2020.101707] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2020] [Revised: 08/12/2020] [Accepted: 08/27/2020] [Indexed: 12/23/2022] Open
Abstract
S-nitrosation of cysteine thiols (SNOs), commonly referred to as S-nitrosylation, is a cysteine oxoform that plays an important role in cellular signaling and impacts protein function and stability. Direct labeling of SNOs in cells with the flexibility to perform a wide range of cellular and biochemical assays remains a bottleneck as all SNO-targeted probes to date employ a single analytical modality such as biotin or a specific fluorophore. We therefore developed a clickable, alkyne-containing SNO probe 'PBZyn' based on the o-phosphino-benzoyl group warhead that enables multi-modal analysis via click conjugation. We demonstrate the utility of PBZyn to assay SNOs using in situ cellular imaging, protein blotting and affinity purification, as well as mass spectrometry. The flexible PBZyn probe will greatly facilitate investigation into the regulation of SNOs.
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Affiliation(s)
- Jenna L Clements
- Department of Medicine, Washington University Medical School, St. Louis, MO, 63110, USA
| | - Franziska Pohl
- Department of Medicine, Washington University Medical School, St. Louis, MO, 63110, USA
| | - Pandi Muthupandi
- Department of Chemistry, Washington University in Saint Louis, St. Louis, MO, 63110, USA
| | - Stephen C Rogers
- Department of Pediatrics and Center for Blood Oxygen Transport and Hemostasis, University of Maryland, School of Medicine, Baltimore, MD, 21201, USA
| | - Jack Mao
- Department of Medicine, Washington University Medical School, St. Louis, MO, 63110, USA
| | - Allan Doctor
- Department of Pediatrics and Center for Blood Oxygen Transport and Hemostasis, University of Maryland, School of Medicine, Baltimore, MD, 21201, USA
| | - Vladimir B Birman
- Department of Chemistry, Washington University in Saint Louis, St. Louis, MO, 63110, USA
| | - Jason M Held
- Department of Medicine, Washington University Medical School, St. Louis, MO, 63110, USA; Siteman Cancer Center, Washington University Medical School, St. Louis, MO, 63110, USA; Department of Anesthesiology, Washington University Medical School, St. Louis, MO, 63110, USA.
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10
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Affiliation(s)
- Seiji SAKAMOTO
- Graduate School of Engineering, Department of Synthetic Chemistry and Biological Chemistry, Kyoto University
| | - Itaru HAMACHI
- Graduate School of Engineering, Department of Synthetic Chemistry and Biological Chemistry, Kyoto University
- ERATO Innovative Molecular Technology for Neuroscience Project, Japan Science and Technology Agency (JST)
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11
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Sinha AK, Equbal D. Thiol−Ene Reaction: Synthetic Aspects and Mechanistic Studies of an Anti-Markovnikov-Selective Hydrothiolation of Olefins. ASIAN J ORG CHEM 2018. [DOI: 10.1002/ajoc.201800639] [Citation(s) in RCA: 60] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Arun K. Sinha
- Medicinal and Process Chemistry Division; C.S.I.R.-Central Drug Research Institute; Council of Scientific and Industrial Research); Lucknow- 226021 (U.P.) India
- Academy of Scientific and Innovative Research (AcSIR); Postal Staff College Area, Sector 19; Kamla Nehru Nagar; Ghaziabad, Uttar Pradesh- 201002
| | - Danish Equbal
- Medicinal and Process Chemistry Division; C.S.I.R.-Central Drug Research Institute; Council of Scientific and Industrial Research); Lucknow- 226021 (U.P.) India
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12
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Basu P, Sikdar R, Kumar T, Namboothiri INN. Synthesis of Functionalized Arenopyrans and Arenylsulfanes by Reacting Nitroallylic Acetates with Arenols and Arenethiols. European J Org Chem 2018. [DOI: 10.1002/ejoc.201801132] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Affiliation(s)
- Pallabita Basu
- Department of Chemistry; Indian Institute of Technology Bombay; 400 076 Mumbai India
| | - Robi Sikdar
- Department of Chemistry; Indian Institute of Technology Bombay; 400 076 Mumbai India
| | - Tarun Kumar
- Department of Chemistry; Indian Institute of Technology Bombay; 400 076 Mumbai India
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13
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Glenadel Q, Ayad C, D’Elia MA, Billard T, Toulgoat F. Nucleophilic trifluoromethylthiolation of organoselenocyanates with trifluoromethanesulfenamide reagent: Access to CF3SSe-containing compounds. J Fluor Chem 2018. [DOI: 10.1016/j.jfluchem.2018.03.009] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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14
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Eiden CG, Aldrich CC. Synthesis of a 3-Amino-2,3-dihydropyrid-4-one and Related Heterocyclic Analogues as Mechanism-Based Inhibitors of BioA, a Pyridoxal Phosphate-Dependent Enzyme. J Org Chem 2017; 82:7806-7819. [PMID: 28682613 DOI: 10.1021/acs.joc.7b00847] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Abstract
Amiclenomycin (ACM) is a chemically unstable antibiotic with selective activity against Mycobacterium tuberculosis (Mtb) due to mechanism-based inhibition of BioA, a pyridoxal 5'-phosphate (PLP)-dependent aminotransferase. The first-generation ACM analogue dihydro-2-pyridone 1 maintains a similar bioactivation mechanism concluding with covalent labeling of the PLP cofactor. To improve on 1, we report the synthesis of dihydro-4-pyranone 2, dihydro-4-pyridone 3, and dihydro-4-thiopyranone 13, which were rationally designed to boost the rate of enzyme inactivation by lowering the pKa of their α-protons. We employed a unified synthetic strategy for construction of the desired heterocycles featuring α-amino ynone generation followed by 6-endo-dig cyclization. However, competitive 5-exo-dig cyclization, β-elimination of the ynone, and dimerization of the resultant α-amino carbonyls all complicated the syntheses of the dihydro-4-pyranone and dihydro-4-pyridone scaffolds. These obstacles were overcome by Teoc protection of the β-amino group in the assembly of 3 and Boc-MOM protection of the α-amino group in the synthesis of 2, enabling the efficient construction of 2 and 3 in seven steps from commercially available starting materials. Dihydro-4-pyridone 3 possessed improved enzyme inhibition as measured by its kinact value against BioA.
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Affiliation(s)
- Carter G Eiden
- Department of Medicinal Chemistry, University of Minnesota , 308 Harvard Street SE, 8-174 WDH, Minneapolis, Minnesota 55455, United States
| | - Courtney C Aldrich
- Department of Medicinal Chemistry, University of Minnesota , 308 Harvard Street SE, 8-174 WDH, Minneapolis, Minnesota 55455, United States
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15
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Giles GI, Nasim MJ, Ali W, Jacob C. The Reactive Sulfur Species Concept: 15 Years On. Antioxidants (Basel) 2017; 6:antiox6020038. [PMID: 28545257 PMCID: PMC5488018 DOI: 10.3390/antiox6020038] [Citation(s) in RCA: 61] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2017] [Revised: 04/21/2017] [Accepted: 05/10/2017] [Indexed: 12/17/2022] Open
Abstract
Fifteen years ago, in 2001, the concept of “Reactive Sulfur Species” or RSS was advocated as a working hypothesis. Since then various organic as well as inorganic RSS have attracted considerable interest and stimulated many new and often unexpected avenues in research and product development. During this time, it has become apparent that molecules with sulfur-containing functional groups are not just the passive “victims” of oxidative stress or simple conveyors of signals in cells, but can also be stressors in their own right, with pivotal roles in cellular function and homeostasis. Many “exotic” sulfur-based compounds, often of natural origin, have entered the fray in the context of nutrition, ageing, chemoprevention and therapy. In parallel, the field of inorganic RSS has come to the forefront of research, with short-lived yet metabolically important intermediates, such as various sulfur-nitrogen species and polysulfides (Sx2−), playing important roles. Between 2003 and 2005 several breath-taking discoveries emerged characterising unusual sulfur redox states in biology, and since then the truly unique role of sulfur-dependent redox systems has become apparent. Following these discoveries, over the last decade a “hunt” and, more recently, mining for such modifications has begun—and still continues—often in conjunction with new, innovative and complex labelling and analytical methods to capture the (entire) sulfur “redoxome”. A key distinction for RSS is that, unlike oxygen or nitrogen, sulfur not only forms a plethora of specific reactive species, but sulfur also targets itself, as sulfur containing molecules, i.e., peptides, proteins and enzymes, preferentially react with RSS. Not surprisingly, today this sulfur-centred redox signalling and control inside the living cell is a burning issue, which has moved on from the predominantly thiol/disulfide biochemistry of the past to a complex labyrinth of interacting signalling and control pathways which involve various sulfur oxidation states, sulfur species and reactions. RSS are omnipresent and, in some instances, are even considered as the true bearers of redox control, perhaps being more important than the Reactive Oxygen Species (ROS) or Reactive Nitrogen Species (RNS) which for decades have dominated the redox field. In other(s) words, in 2017, sulfur redox is “on the rise”, and the idea of RSS resonates throughout the Life Sciences. Still, the RSS story isn’t over yet. Many RSS are at the heart of “mistaken identities” which urgently require clarification and may even provide the foundations for further scientific revolutions in the years to come. In light of these developments, it is therefore the perfect time to revisit the original hypotheses, to select highlights in the field and to question and eventually update our concept of “Reactive Sulfur Species”.
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Affiliation(s)
- Gregory I Giles
- Department of Pharmacology and Toxicology, University of Otago, PO Box 56, Dunedin 9054, New Zealand.
| | - Muhammad Jawad Nasim
- Division of Bioorganic Chemistry, School of Pharmacy, Saarland University, Campus B2 1, Saarbruecken D-66123, Germany.
| | - Wesam Ali
- Division of Bioorganic Chemistry, School of Pharmacy, Saarland University, Campus B2 1, Saarbruecken D-66123, Germany.
| | - Claus Jacob
- Division of Bioorganic Chemistry, School of Pharmacy, Saarland University, Campus B2 1, Saarbruecken D-66123, Germany.
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16
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Berthet M, Martinez J, Parrot I. MgI
2
‐chemoselective cleavage for removal of amino acid protecting groups: A fresh vision for peptide synthesis. Pept Sci (Hoboken) 2017; 108. [DOI: 10.1002/bip.22908] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2016] [Revised: 06/28/2016] [Accepted: 07/04/2016] [Indexed: 12/21/2022]
Affiliation(s)
- Mathéo Berthet
- Institut des Biomolécules Max Mousseron, IBMM UMR‐5247 CNRS, Université de Montpellier, ENSCMCC17‐03, Pl. E. Bataillon, 34095 Montpellier Cedex 5 France
| | - Jean Martinez
- Institut des Biomolécules Max Mousseron, IBMM UMR‐5247 CNRS, Université de Montpellier, ENSCMCC17‐03, Pl. E. Bataillon, 34095 Montpellier Cedex 5 France
| | - Isabelle Parrot
- Institut des Biomolécules Max Mousseron, IBMM UMR‐5247 CNRS, Université de Montpellier, ENSCMCC17‐03, Pl. E. Bataillon, 34095 Montpellier Cedex 5 France
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17
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Ruddraraju KV, Parsons ZD, Lewis CD, Gates KS. Correction to “Allylation and Alkylation of Biologically Relevant Nucleophiles by Diallyl Sulfides”. J Org Chem 2017; 82:2306. [DOI: 10.1021/acs.joc.7b00246] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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18
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Oliveira BL, Guo Z, Boutureira O, Guerreiro A, Jiménez‐Osés G, Bernardes GJL. A Minimal, Unstrained S-Allyl Handle for Pre-Targeting Diels-Alder Bioorthogonal Labeling in Live Cells. Angew Chem Int Ed Engl 2016; 55:14683-14687. [PMID: 27763724 PMCID: PMC5132151 DOI: 10.1002/anie.201608438] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2016] [Revised: 09/27/2016] [Indexed: 11/12/2022]
Abstract
The unstrained S-allyl cysteine amino acid was site-specifically installed on apoptosis protein biomarkers and was further used as a chemical handle and ligation partner for 1,2,4,5-tetrazines by means of an inverse-electron-demand Diels-Alder reaction. We demonstrate the utility of this minimal handle for the efficient labeling of apoptotic cells using a fluorogenic tetrazine dye in a pre-targeting approach. The small size, easy chemical installation, and selective reactivity of the S-allyl handle towards tetrazines should be readily extendable to other proteins and biomolecules, which could facilitate their labeling within live cells.
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Affiliation(s)
- Bruno L. Oliveira
- Department of ChemistryUniversity of CambridgeLensfield RoadCB2 1EWCambridgeUK
| | - Zijian Guo
- Department of ChemistryUniversity of CambridgeLensfield RoadCB2 1EWCambridgeUK
| | - Omar Boutureira
- Department of ChemistryUniversity of CambridgeLensfield RoadCB2 1EWCambridgeUK
| | - Ana Guerreiro
- Instituto de Medicina MolecularFaculdade de MedicinaUniversidade de LisboaAvenida Professor Egas Moniz1649-028LisboaPortugal
| | - Gonzalo Jiménez‐Osés
- Departamento de QuímicaUniversidad de La RiojaCentro de Investigación en Síntesis Química26006LogroñoSpain
- Institute of Biocomputation and Physics of Complex Systems (BIFI)University of ZaragozaBIFI-IQFR (CSIC)ZaragozaSpain
| | - Gonçalo J. L. Bernardes
- Department of ChemistryUniversity of CambridgeLensfield RoadCB2 1EWCambridgeUK
- Instituto de Medicina MolecularFaculdade de MedicinaUniversidade de LisboaAvenida Professor Egas Moniz1649-028LisboaPortugal
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19
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Oliveira BL, Guo Z, Boutureira O, Guerreiro A, Jiménez-Osés G, Bernardes GJL. A Minimal, Unstrained S-Allyl Handle for Pre-Targeting Diels-Alder Bioorthogonal Labeling in Live Cells. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201608438] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Bruno L. Oliveira
- Department of Chemistry; University of Cambridge; Lensfield Road CB2 1EW Cambridge UK
| | - Zijian Guo
- Department of Chemistry; University of Cambridge; Lensfield Road CB2 1EW Cambridge UK
| | - Omar Boutureira
- Department of Chemistry; University of Cambridge; Lensfield Road CB2 1EW Cambridge UK
| | - Ana Guerreiro
- Instituto de Medicina Molecular; Faculdade de Medicina; Universidade de Lisboa; Avenida Professor Egas Moniz 1649-028 Lisboa Portugal
| | - Gonzalo Jiménez-Osés
- Departamento de Química; Universidad de La Rioja; Centro de Investigación en Síntesis Química; 26006 Logroño Spain
- Institute of Biocomputation and Physics of Complex Systems (BIFI); University of Zaragoza; BIFI-IQFR (CSIC) Zaragoza Spain
| | - Gonçalo J. L. Bernardes
- Department of Chemistry; University of Cambridge; Lensfield Road CB2 1EW Cambridge UK
- Instituto de Medicina Molecular; Faculdade de Medicina; Universidade de Lisboa; Avenida Professor Egas Moniz 1649-028 Lisboa Portugal
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20
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Panigrahi K, Applegate GA, Malik G, Berkowitz DB. Combining a Clostridial enzyme exhibiting unusual active site plasticity with a remarkably facile sigmatropic rearrangement: rapid, stereocontrolled entry into densely functionalized fluorinated phosphonates for chemical biology. J Am Chem Soc 2015; 137:3600-9. [PMID: 25719907 DOI: 10.1021/jacs.5b00022] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Described is an efficient stereocontrolled route into valuable, densely functionalized fluorinated phosphonates that takes advantage of (i) a Clostridial enzyme to set the absolute stereochemistry and (ii) a new [3,3]-sigmatropic rearrangement of the thiono-Claisen variety that is among the fastest sigmatropic rearrangements yet reported. Here, a pronounced rate enhancement is achieved by distal fluorination. This rearrangement is completely stereoretentive, parlaying the enzymatically established β-C-O stereochemistry in the substrate into the δ-C-S stereochemistry in the product. The final products are of interest to chemical biology, with a platform for Zn-aminopeptidase A inhibitors being constructed here. The enzyme, Clostridium acetobutylicum (CaADH), recently expressed by our group, reduces a spectrum of γ,δ-unsaturated β-keto-α,α-difluorophosphonate esters (93-99% ee; 10 examples). The resultant β-hydroxy-α,α-difluorophosphonates possess the "L"-stereochemistry, opposite to that previously observed for the CaADH-reduction of ω-keto carboxylate esters ("D"), indicating an unusual active site plasticity. For the thiono-Claisen rearrangement, a notable structure-reactivity relationship is observed. Measured rate constants vary by over 3 orders of magnitude, depending upon thiono-ester structure. Temperature-dependent kinetics reveal an unusually favorable entropy of activation (ΔS(‡) = 14.5 ± 0.6 e.u.). Most notably, a 400-fold rate enhancement is seen upon fluorination of the distal arene ring, arising from favorable enthalpic (ΔΔH(‡) = -2.3 kcal/mol) and entropic (ΔΔS(‡) = 4 e.u., i.e. 1.2 kcal/mol at rt) contributions. The unusual active site plasticity seen here is expected to drive structural biology studies on CaADH, while the exceptionally facile sigmatropic rearrangement is expected to drive computational studies to elucidate its underlying entropic and enthalpic basis.
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Affiliation(s)
- Kaushik Panigrahi
- Department of Chemistry, University of Nebraska, Lincoln, Nebraska 68588-0304, United States
| | - Gregory A Applegate
- Department of Chemistry, University of Nebraska, Lincoln, Nebraska 68588-0304, United States
| | - Guillaume Malik
- Department of Chemistry, University of Nebraska, Lincoln, Nebraska 68588-0304, United States
| | - David B Berkowitz
- Department of Chemistry, University of Nebraska, Lincoln, Nebraska 68588-0304, United States
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21
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Kung KKY, Ko HM, Cui JF, Chong HC, Leung YC, Wong MK. Cyclometalated gold(iii) complexes for chemoselective cysteine modification via ligand controlled C–S bond-forming reductive elimination. Chem Commun (Camb) 2014; 50:11899-902. [DOI: 10.1039/c4cc04467c] [Citation(s) in RCA: 72] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
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22
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Lin YA, Boutureira O, Lercher L, Bhushan B, Paton RS, Davis BG. Rapid cross-metathesis for reversible protein modifications via chemical access to Se-allyl-selenocysteine in proteins. J Am Chem Soc 2013; 135:12156-9. [PMID: 23889088 PMCID: PMC3810893 DOI: 10.1021/ja403191g] [Citation(s) in RCA: 93] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
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Cross-metathesis (CM) has recently
emerged as a viable strategy for protein modification. Here, efficient
protein CM has been demonstrated through biomimetic chemical access
to Se-allyl-selenocysteine (Seac), a metathesis-reactive
amino acid substrate, via dehydroalanine. On-protein reaction kinetics
reveal a rapid reaction with rate constants of Seac-mediated-CM comparable
or superior to off-protein rates of many current bioconjugations.
This use of Se-relayed Seac CM on proteins has now
enabled reactions with substrates (allyl GlcNAc, N-allyl acetamide) that were previously not possible for the corresponding
sulfur analogue. This CM strategy was applied to histone proteins
to install a mimic of acetylated lysine (KAc, an epigenetic marker).
The resulting synthetic H3 was successfully recognized by antibody
that binds natural H3-K9Ac. Moreover, Cope-type selenoxide elimination
allowed this putative marker (and function) to be chemically expunged,
regenerating an H3 that can be rewritten to complete a chemically
enabled “write (CM)–erase (ox)–rewrite (CM)”
cycle.
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Affiliation(s)
- Yuya A Lin
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford, Mansfield Road, Oxford OX1 3TA, UK
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23
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Kundu R, Ball ZT. Rhodium-catalyzed cysteine modification with diazo reagents. Chem Commun (Camb) 2013; 49:4166-8. [DOI: 10.1039/c2cc37323h] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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24
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On-Yee Chan A, Lui-Lui Tsai J, Kar-Yan Lo V, Li GL, Wong MK, Che CM. Gold-mediated selective cysteine modification of peptides using allenes. Chem Commun (Camb) 2013; 49:1428-30. [DOI: 10.1039/c2cc38214h] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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25
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Lachkar D, Boudet C, Guinchard X, Crich D. 2-(Selenocyanatomethyl)-2-propenol — A convenient synthon for ligation via the deselenative allylic rearrangement of allyl selenosulfides: preparation, functional group compatibility, and application. CAN J CHEM 2012. [DOI: 10.1139/v2012-056] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
The preparation and reactions of 2-(selenocyanatomethyl)-2-propenol are described and reveal the compatibility of the allylic selenocyanate group with a range of mild oxidizing and Lewis acidic conditions. 2-(Selenocyanatomethyl)-2-propenol and its derivatives are employed in the functionalization of simple and amino acid derived thiols in methanolic solution at room temperature to give 2-(hydroxymethyl)allyl sulfides in good to excellent yield.
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Affiliation(s)
- David Lachkar
- Centre de Recherche de Gif, Institut de Chimie des Substances Naturelles, CNRS, 1 Avenue de la Terrasse, 91190 Gif-sur-Yvette, France
| | - Caroline Boudet
- Centre de Recherche de Gif, Institut de Chimie des Substances Naturelles, CNRS, 1 Avenue de la Terrasse, 91190 Gif-sur-Yvette, France
| | - Xavier Guinchard
- Centre de Recherche de Gif, Institut de Chimie des Substances Naturelles, CNRS, 1 Avenue de la Terrasse, 91190 Gif-sur-Yvette, France
| | - David Crich
- Centre de Recherche de Gif, Institut de Chimie des Substances Naturelles, CNRS, 1 Avenue de la Terrasse, 91190 Gif-sur-Yvette, France
- Department of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, MI 48202, USA
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26
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Ferry A, Guinchard X, Retailleau P, Crich D. Synthesis, Characterization, and Coupling Reactions of Six-Membered Cyclic P-Chiral Ammonium Phosphonite–Boranes; Reactive H-Phosphinate Equivalents for the Stereoselective Synthesis of Glycomimetics. J Am Chem Soc 2012; 134:12289-301. [DOI: 10.1021/ja305104b] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Affiliation(s)
- Angélique Ferry
- Centre de Recherche
de Gif, Institut de Chimie des Substances Naturelles, CNRS,
Avenue de la Terrasse, 91198 Gif-sur-Yvette, France
| | - Xavier Guinchard
- Centre de Recherche
de Gif, Institut de Chimie des Substances Naturelles, CNRS,
Avenue de la Terrasse, 91198 Gif-sur-Yvette, France
| | - Pascal Retailleau
- Centre de Recherche
de Gif, Institut de Chimie des Substances Naturelles, CNRS,
Avenue de la Terrasse, 91198 Gif-sur-Yvette, France
| | - David Crich
- Centre de Recherche
de Gif, Institut de Chimie des Substances Naturelles, CNRS,
Avenue de la Terrasse, 91198 Gif-sur-Yvette, France
- Department of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit,
Michigan 48202, United States
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27
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Cannon JS, Olson AC, Overman LE, Solomon NS. Palladium(II)-catalyzed enantioselective synthesis of 2-vinyl oxygen heterocycles. J Org Chem 2012; 77:1961-73. [PMID: 22316285 DOI: 10.1021/jo202553a] [Citation(s) in RCA: 55] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
2-Vinylchromanes (1), 2-vinyl-1,4-benzodioxanes (2), and 2,3-dihydro-2-vinyl-2H-1,4-benzoxazines (3) can be prepared in high yields (90-98%) and excellent enantiomeric purities (87-98% ee) by [COP-OAc](2)-catalyzed cyclization of phenolic (E)-allylic trichloroacetimidate precursors. Deuterium-labeling and computational experiments are consistent with these cyclization reactions taking place by an anti-oxypalladation/syn-deoxypalladation mechanism. 2-Vinylchromanes can also be prepared in good yields and high enantiomeric purities from analogous (E)-allylic acetate precursors, which constitutes the first report that acetate is a competent leaving group in COP-catalyzed enantioselective S(N)2' substitution reactions.
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Affiliation(s)
- Jeffrey S Cannon
- Department of Chemistry, 1102 Natural Sciences II, University of California, Irvine, California 92697-2025, USA
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28
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Affiliation(s)
- Kaname Sasaki
- a Centre de Recherche de Gif , Institut de Chimie des Substances Naturelles, CNRS , Gif-sur-Yvette, France
| | - Sylvain Aubry
- a Centre de Recherche de Gif , Institut de Chimie des Substances Naturelles, CNRS , Gif-sur-Yvette, France
| | - David Crich
- a Centre de Recherche de Gif , Institut de Chimie des Substances Naturelles, CNRS , Gif-sur-Yvette, France
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29
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Sun DQ, Yang JK. (15-Crown-5-κO)[S-(E)-1,2-dichloro-vinyl thio-sulfato-κO]sodium. Acta Crystallogr Sect E Struct Rep Online 2011; 67:m934. [PMID: 21836918 PMCID: PMC3151796 DOI: 10.1107/s1600536811022252] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2011] [Accepted: 06/08/2011] [Indexed: 11/28/2022]
Abstract
In the title complex, [Na(C2HCl2O3S2)(C10H20O5)], there are two independent complex units in the asymmetric unit, one of which has a 55:45% disorder in the 15-crown-5 component. The coordination sphere about the Na atom in each complex unit comprises five bonds to O atoms of the crown ether [Na—O = 2.390 (7)–2.466 (6) Å] and one to a thiosulfate O atom [Na—O = 2.305 (4) and 2.447 (3) Å].
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Affiliation(s)
- Dong-Qing Sun
- College of Chemistry and Chemical Engineering, Graduate University of Chinese Academy of Sciences, Beijing 100049, People's Republic of China
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30
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Subramanian V, Moumé-Pymbock M, Hu T, Crich D. Protecting group-free glycoligation by the desulfurative rearrangement of allylic disulfides as a means of assembly of oligosaccharide mimetics. J Org Chem 2011; 76:3691-709. [PMID: 21428425 PMCID: PMC3094498 DOI: 10.1021/jo102411j] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
2-(2-Pyridyldithio-3-butenyl) glycosides react with carbohydrate-based thiols in a two-step process involving sulfenyl transfer followed by desulfurative 2,3-allylic rearrangement, promoted by either triphenylphosphine or silver nitrate, to give novel saccharide mimetics. In an alternative embodiment of the same chemistry anomeric thiols are coupled with carbohydrates derivatized in the form of 2-(2-pyridyldithio-3-butenyl) ethers. This new method of glycoligation does not require protection of hydroxyl groups and is compatible with the presence of acetamides, azides, trichloroethoxycarbamates, and thioglycosides. Variations on the general theme enable the preparation of mimetics of reducing and nonreducing oligosaccharides as well as of nonglycosidically linked systems.
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Affiliation(s)
| | - Myriame Moumé-Pymbock
- Department of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, MI 48202
| | - Tianshun Hu
- Department of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, MI 48202
| | - David Crich
- Department of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, MI 48202
- Centre de Recherche de Gif, Institut de Chimie des Substances Naturelles, CNRS, Avenue de la Terrasse, 91198 Gif-sur-Yvette, France
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31
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Zhang D, Devarie-Baez NO, Pan J, Wang H, Xian M. One-pot thioether formation from S-nitrosothiols. Org Lett 2010; 12:5674-6. [PMID: 21080645 DOI: 10.1021/ol102491n] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Protein S-nitrosation is an important post-translational modification. However, the detection of S-nitrosation is still problematic because S-nitrosation products, that is, S-nitrosothiols, are unstable species. Here a new reaction which can selectively convert unstable S-nitrosothiols to stable thioethers in one-pot under very mild conditions is reported. This reaction has the potential to be applied in the detection of protein S-nitrosation.
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Affiliation(s)
- Dehui Zhang
- Department of Chemistry, Washington State University, Pullman, Washington 99164, USA
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32
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Baslé E, Joubert N, Pucheault M. Protein chemical modification on endogenous amino acids. ACTA ACUST UNITED AC 2010; 17:213-27. [PMID: 20338513 DOI: 10.1016/j.chembiol.2010.02.008] [Citation(s) in RCA: 301] [Impact Index Per Article: 21.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2009] [Revised: 01/29/2010] [Accepted: 02/11/2010] [Indexed: 12/15/2022]
Abstract
Chemical modification of protein is an arduous but fruitful task. Many chemical methods have been developed for such purpose by carefully balancing reactivity and selectivity. Now both chemists and biologists have in hand an arsenal of tools from which they can select a relevant reaction to tackle their problems. This review focuses on the various chemical transformations available for selective modification of proteins. It also provides a brief overview of some of their main applications, including detection of protein interactions, preparation of bioconjugates, and protein microarrays.
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Affiliation(s)
- Emmanuel Baslé
- Molecular Chemistry and Photonic, UMR 6510 CPM, Centre National de la Recherche Scientifique, Université de Rennes1, 263 Avenue du Général Leclerc, 35042 Rennes cedex, France
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33
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Krishnamurthy VR, Wilson JT, Cui W, Song X, Yi L, Cummings RD, Chaikof EL. Chemoselective immobilization of peptides on abiotic and cell surfaces at controlled densities. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2010; 26:7675-7678. [PMID: 20450194 PMCID: PMC2894806 DOI: 10.1021/la101192v] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
We report herein a new and enabling approach for decorating both abiotic and cell surfaces with the extracellular matrix IKVAV peptide in a site-specific manner using strain promoted azide-alkyne cycloaddition. A cyclooctyne-derivatized IKVAV peptide was synthesized and immobilized on the surface of pancreatic islets through strain-promoted azide-alkyne cycloaddition with cell surface azides generated by the electrostatic adsorption of a cytocompatible poly(L-lysine)-graft-poly(ethylene glycol) (PLL-g-PEG) copolymer bearing azido groups (PP-N(3)). Both "one-pot" and sequential addition of PP-N(3) and a cyclooctyne-derivatized IKVAV peptide conjugate enabled efficient modification of the pancreatic islet surface in less than 60 min. The ability to bind peptides at controlled surface densities was demonstrated in a quantitative manner using microarrays. Additionally, the technique is remarkably rapid and highly efficient, opening new avenues for the molecular engineering of cellular interfaces and protein and peptide microarrays.
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Affiliation(s)
| | - John T. Wilson
- Departments of Biomedical Engineering and Surgery, Emory University, Atlanta, GA-30322, USA
- Department of Biomedical Engineering, Emory University/Georgia Institute of Technology, Atlanta, GA-30322, USA
| | - Wanxing Cui
- Departments of Biomedical Engineering and Surgery, Emory University, Atlanta, GA-30322, USA
| | - XueZheng Song
- Department of Biochemistry, Emory University, Atlanta, GA-30322, USA
| | - Lasanajak Yi
- Department of Biochemistry, Emory University, Atlanta, GA-30322, USA
| | | | - Elliot L. Chaikof
- Departments of Biomedical Engineering and Surgery, Emory University, Atlanta, GA-30322, USA
- Department of Biomedical Engineering, Emory University/Georgia Institute of Technology, Atlanta, GA-30322, USA
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34
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Crich D, Subramanian V, Karatholuvhu M. Silver-mediated allylic disulfide rearrangement for conjugation of thiols in protic media. J Org Chem 2010; 74:9422-7. [PMID: 19911776 DOI: 10.1021/jo902012m] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Alkyl and aryl allyl disulfides are induced to undergo the desulfurative allylic rearrangement by silver nitrate in protic solvents at room temperature, thereby removing the necessity for the use of phosphines as thiophilic reagents. The silver-mediated reaction functions at ambient temperature in protic solvents and in the absence of protecting groups.
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Affiliation(s)
- David Crich
- Centre de Recherche de Gif, Institut de Chimie des Substances Naturelles, CNRS, Avenue de la Terrasse, 91198 Gif-sur-Yvette, France.
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35
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Chalker JM, Bernardes GJL, Lin YA, Davis BG. Chemical modification of proteins at cysteine: opportunities in chemistry and biology. Chem Asian J 2009; 4:630-40. [PMID: 19235822 DOI: 10.1002/asia.200800427] [Citation(s) in RCA: 469] [Impact Index Per Article: 31.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Chemical modification of proteins is a rapidly expanding area in chemical biology. Selective installation of biochemical probes has led to a better understanding of natural protein modification and macromolecular function. In other cases such chemical alterations have changed the protein function entirely. Additionally, tethering therapeutic cargo to proteins has proven invaluable in campaigns against disease. For controlled, selective access to such modified proteins, a unique chemical handle is required. Cysteine, with its unique reactivity, has long been used for such modifications. Cysteine has enjoyed widespread use in selective protein modification, yet new applications and even new reactions continue to emerge. This Focus Review highlights the enduring utility of cysteine in protein modification with special focus on recent innovations in chemistry and biology associated with such modifications.
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Affiliation(s)
- Justin M Chalker
- Department of Chemistry, University of Oxford, Chemistry Research Laboratory, 12 Mansfield Road, Oxford OX1 3TA, UK
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36
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Zaitsev A, Caldwell H, Pregosin P, Veiros L. Fast Ruthenium-Catalysed Allylation of Thiols by Using Allyl Alcohols as Substrates. Chemistry 2009; 15:6468-77. [DOI: 10.1002/chem.200900192] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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37
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Lin YA, Chalker JM, Davis BG. Olefin Metathesis for Site-Selective Protein Modification. Chembiochem 2009; 10:959-69. [DOI: 10.1002/cbic.200900002] [Citation(s) in RCA: 131] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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38
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Shiu HY, Chan TC, Ho CM, Liu Y, Wong MK, Che CM. Electron-Deficient Alkynes as Cleavable Reagents for the Modification of Cysteine-Containing Peptides in Aqueous Medium. Chemistry 2009; 15:3839-50. [DOI: 10.1002/chem.200800669] [Citation(s) in RCA: 85] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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39
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Chalker JM, Lin YA, Boutureira O, Davis BG. Enabling olefin metathesis on proteins: chemical methods for installation of S-allyl cysteine. Chem Commun (Camb) 2009:3714-6. [DOI: 10.1039/b908004j] [Citation(s) in RCA: 71] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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40
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Crich D, Yang F. Synthesis of neoglycoconjugates by the desulfurative rearrangement of allylic disulfides. J Org Chem 2008; 73:7017-27. [PMID: 18729514 PMCID: PMC2742710 DOI: 10.1021/jo8015314] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Two series of neoglycosyl donors are prepared on the basis of connection of an allylic disulfide motif to the anomeric center via a simple O-glycosyl linkage or N-glycosyl amide unit. Conjugation of both sets of donors to cysteine in peptides is demonstrated through classical disulfide exchange followed by the phosphine-mediated desulfurative allylic rearrangement resulting in neoglycopeptides characterized by a simple thioether spacer. The conjugation reaction functions in the absence of protecting groups on both the neoglycosyl donor and peptide in aqueous media at room temperature.
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Affiliation(s)
- David Crich
- Department of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, Michigan 48202, USA.
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Li Z, Wang C, Fu Y, Guo QX, Liu L. Substituent Effect on the Efficiency of Desulfurizative Rearrangement of Allylic Disulfides. J Org Chem 2008; 73:6127-36. [DOI: 10.1021/jo800747g] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Zhe Li
- Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology (Ministry of Education), Department of Chemistry, Tsinghua University, Beijing 100084, China
| | - Chen Wang
- Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology (Ministry of Education), Department of Chemistry, Tsinghua University, Beijing 100084, China
| | - Yao Fu
- Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology (Ministry of Education), Department of Chemistry, Tsinghua University, Beijing 100084, China
| | - Qing-Xiang Guo
- Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology (Ministry of Education), Department of Chemistry, Tsinghua University, Beijing 100084, China
| | - Lei Liu
- Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology (Ministry of Education), Department of Chemistry, Tsinghua University, Beijing 100084, China
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Bernardes G, Grayson E, Thompson S, Chalker J, Errey J, El Oualid F, Claridge T, Davis B. From Disulfide- to Thioether-Linked Glycoproteins. Angew Chem Int Ed Engl 2008. [DOI: 10.1002/ange.200704381] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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Gamblin DP, van Kasteren S, Bernardes GJL, Chalker JM, Oldham NJ, Fairbanks AJ, Davis BG. Chemical site-selective prenylation of proteins. MOLECULAR BIOSYSTEMS 2008; 4:558-61. [DOI: 10.1039/b802199f] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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