Connection of Metallamacrocycles via Dynamic Covalent Chemistry: A Versatile Method for the Synthesis of Molecular Cages

Guest-induced narcissistic self-sorting in water via imine formation

Two anionic tetrahedral cages were self-assembled as the only observable products in weakly basic water via imine condensation. The success of the high-yielding formation of the cages in water relies on (i) multivalency enhancing the stability of the imine bond and affording these cages water compatibility and (ii) a guest template with a complementary size and geometry that provides a hydrophobic driving force by occupying the corresponding cage cavity. When all four precursors, namely two trisaldehydes and two trisamines, were combined in water, narcissistic self-sorting occurred when both guest templates were present. In organic media where the hydrophobic effect is absent, narcissistic self-sorting did not occur in the analogous cage systems, confirming the importance of guest templates.

Molecular imine cages with π-basic Au3(pyrazolate) faces

One tetrahedral and two trigonal prismatic cages with π-basic Au3(pyrazolate)3 faces were obtained by connection of pre-formed gold complexes via dynamic covalent imine chemistry. The parallel arrangement of the Au3(pyrazolate)3 complexes in the prismatic cages augments the interaction with π-acids, as demonstrated by the encapsulation of polyhalogenated aromatic compounds. The tetrahedral cage was found to act as a potent receptor for fullerenes. The structures of the three cages, as well as the structures of adducts with C60 and C70, could be established by X-ray crystallography.

A tetrahedron from homooxacalix[3]arene, the fifth Platonic polyhedron from calixarenes and uranyl

A self-assembled tetrahedral cage results from two C ₃-symmetry building blocks, namely, homooxacalix[3]arene tricarboxylate and uranyl cation, as demonstrated by X-ray crystallography. In the cage, four metals coordinate at the lower rim with the phenolic and ether oxygen atoms to shape the macrocycle with appropriate dihedral angles for tetrahedron formation, whereas four additional uranyl cations further coordinate at the upper-rim carboxylates to finalize the assembly. Counterions dictate the filling and porosity of the aggregates, whereas potassium induces highly porous structures, and tetrabutylammonium yields compact, densely packed frameworks. The tetrahedron metallo-cage complements our previous report (Pasquale et al., Nat. Commun., 2012, 3, 785) on uranyl-organic frameworks (UOFs) from calix[4]arene and calix[5]arene carboxylates (octahedral/cubic and icosahedral/dodecahedral giant cages, respectively) and completes the assembly of all five Platonic solids from just two chemical components.

Oligopyrrolic Cages: From Classic Molecular Constructs to Chemically Responsive Polytopic Receptors

Conspectus"Functional molecular systems", discrete and self-assembled constructs where control over molecular recognition, structure, bonding, transport, release, catalytic activity, etc., is readily achieved, are a topic of current interest. Within this broad paradigm, oligopyrrolic cages have garnered attention due to their responsive recognition features. Due to the presence of slightly polar pyrrole subunits which can also behave as hydrogen-bonding donors, these oligopyrrolic cages are potential receptors for various polarized species. In this Account, we summarize recent advances involving the syntheses and study of (1) covalent oligopyrrolic macrobicyclic cages, (2) oligopyrrolic metallacages, and (3) oligopyrrolic noncovalently linked cages. Considered in concert, these molecular constructs have allowed advances in applied supramolecular chemistry; to date, they have been exploited for selective guest encapsulation studies, anion binding and ion-channel formation, and gas absorption, among other applications. While key findings from others will be noted, in this Account will focus on our own contributions to the chemistry of discrete oligopyrrolic macrocycles and their use in supramolecular host-guest chemistry and sensing applications. In terms of specifics, we will detail how oligopyrrole cages with well-defined molecular geometries permit reversible guest binding under ambient conditions and how the incorporation of pyrrole subunits within larger superstructures allows effective control over anion/conjugate acid binding activity under ambient conditions. We will also provide examples that show how derivatization of these rudimentary macrocyclic cores with various sterically congested β-substituted oligopyrroles can provide entry into more complex supramolecular architectures. In addition, we will detail how hybrid systems that include heterocycles other than pyrrole, such as pyridine and naphthyridine, can be used to create self-assembled materials that show promise as gas-absorbing materials and colorimetric reversible sensors. Studies involving oligopyrrolic polymetallic cages and oligopyrrolic supramolecular cages will also be reviewed. First, we will discuss all-carbon-linked oligopyrrolic bicycles and continue on to present systems linked via amines and imines linkages. Finally, we will summarize recent work on pyrrolic cages created through the use of metal centers or various noncovalent interactions. We hope that this Account will provide researchers with an initial foundation for understanding oligopyrrolic cage chemistry, thereby allowing for further advances in the area. It is expected that the fundamental design and recognition principles made in the area of oligopyrrole cages, as exemplified by our contributions, will be of general use to researchers targeting the design of functional molecular systems. As such, we have structured this Account so as to summarize the past while setting the stage for the future.

Cyclization or bridging: which occurs faster is the key to the self-assembly mechanism of Pd6L3 coordination prisms

The self-assembly processes of Pd₆L₃ coordination prisms consisting of cis-protected Pd(II) complexes and porphyrin-based tetratopic ligands with four 3-pyridyl or 4-pyridyl groups (L) were investigated by experimental and numerical methods, QASAP (quantitative analysis of self-assembly process) and NASAP (numerical analysis of self-assembly process), respectively. It was found that contrary to common intuition macrocyclization takes place faster than the bridging reaction in the prism assembly and that the bridging reaction occurring before the macrocyclization tends to produce kinetically trapped species. A numerical simulation demonstrates that the relative magnitude of the rate constants between the macrocyclization and the bridging reaction is the key factor that determines whether the self-assembly leads to the thermodynamically most stable prism or to kinetically trapped species. Finding the key elementary reactions that largely affect the selection of the major assembly pathway is helpful to rationally control the products under kinetic control via modulation of the energy landscape.

Being positive is not everything - experimental and computational studies on the selectivity of a self-assembled, multiple redox-state, receptor that binds anions with up to picomolar affinities

The interaction of the self-assembled trinuclear ruthenium bowl 1 3+ , that displays three other accessible oxidation states, with oxo-anions is investigated. Using a combination of NMR and electrochemical experimental data, estimates of the binding affinities of 1 4+ , 1 5+ , and 1 6+ for both halide and oxo-anions were derived. This analysis revealed that, across the range of oxidation states of the host, both high anion binding affinities (>10 9 M -1 for specific guests bound to 1 6+ ) and high selectivities (a range of >10 7 M -1 ) were observed. As the crystal structure of binding of the hexafluorophosphate anion revealed that the host has two potential binding sites (named the α and β pockets), the host-guest properties of both putative binding sites of the bowl, in all of its four oxidation states, were investigated through detailed quantum-based computational studies. These studies revealed that, due to the interplay of electrostatically assisted hydrogen-bonding and anion-π interactions, binding to the α pocket is generally preferred, except for the case of the relatively large and lipophilic hexafluorophosphate anionic guest and the host in the highest oxidation states, where the β pocket becomes relatively favourable. This analysis confirms that host-guest interactions involving structurally complex supramolecular architectures are driven by a combination of non-covalent interactions and, even in the case of charged binding pairs, electrostatics alone cannot accurately define these recognition processes.

Recent advances on triptycene derivatives in supramolecular and materials chemistry

Triptycene derivatives, a type of specific aromatic compound, have been attracting much attention in many research areas. Over the past several years, triptycene and its derivatives have been described to be useful and efficient building blocks for the design and synthesis of novel supramolecular acceptors, porous materials and luminescent materials with specific structures and properties. In this review, recent researches on triptycene derivatives in supramolecular and materials chemistry are summarized. Especially, the construction of a new type of macrocyclic arenes and organic cages with triptycene and its derivatives as building blocks are focused on, and their applications in molecular recognition, self-assembly and gas selective sorption are highlighted. Moreover, the applications of triptycene and its derivatives in porous organic materials and thermally activated delayed fluorescence (TADF) materials are also discussed.

Cucurbitimines - imine cages with concave walls

The variety of shape-persistent organic cages by imine bond formation has tremendously enlarged in recent years by using different building blocks (aldehydes and amines) in the condensation reactions. Here, we describe the use of a kinked tetraldehyde to generate pumpkin-shaped cages with concave walls, similar to cucurbiturils.

Kinked tetraaldehyde building blocks lead in condensation reactions with diamines to pumpkin shaped cages – the cucurbitimines.

Recent advances in heteroleptic multiple-stranded metallosupramolecules

Well-ordered combination of defined coordination spheres and multiple types of ligands (heteroleptic) in a given structure can expand the structural complexity and functional diversity of the resulting metallosupramolecules. Such heteroleptic metallosupramolecular architectures are expected to afford advanced utility in a variety of applications. In this concise review article, recent advances in the development of multi-nuclear-cluster-based heteroleptic multiple-stranded (HLMS) metallosupramolecules are summarized and demonstrated. To construct HLMS metallosupramolecules, one type of multitopic ligands can be employed for building up multiple strands, while another type of ligands can be utilized to construct multi-nuclear clusters. Most HLMS metallosupramolecules adopt helical geometries and have high molecular symmetry, which can be key factors for the structural completion. HLMS metallosupramolecules can be used as basic building blocks for the fabrication of higher-order polymeric or discrete assembly architectures with well-defined geometries.

Three-Component Self-Assembly Changes its Course: A Leap from Simple Polymers to 3D Networks of Spherical Host-Guest Assemblies

One‐pot self‐assembly reactions of the polyphosphorus complex [Cp*Fe(η⁵‐P₅)] (A), a coinage metal salt AgSbF₆, and flexible aliphatic dinitriles NC(CH₂)_xCN (x=1–10) yield 1D, 2D, and 3D coordination polymers. The seven‐membered backbone of the dinitrile was experimentally found as the borderline for the self‐assembly system furnishing products of different kinds. At x<7, various rather simple polymers are exclusively formed possessing either 0D or 1D Ag/A structural motifs connected by dinitrile spacers, while at x≥7, the self‐assembly switches to unprecedented extraordinary 3D networks of nano‐sized host–guest assemblies (SbF₆)@[(A)₉Ag₁₁]¹¹⁺ (x=7) or (A)@[(A)₁₂Ag₁₂]¹²⁺ (x=8–10) linked by dinitriles. The polycationic nodes represent the first superspheres based on A and silver and are host–guest able. All products are characterized by NMR spectroscopy, mass spectrometry, and single‐crystal X‐ray diffraction. The assemblies [(A)₁₂Ag₁₂]¹²⁺ were visualized by transmission electron microscopy.

Synthetic Factors Governing Access to Tris(β-diketimine) Cyclophanes versus Tripodal Tri-β-aminoenones

Tris(β-diketimine) cyclophanes are an important ligand class for investigating cooperative multimetallic interactions of bioinorganic clusters. Discussed herein are the synthetic factors governing access to tris(β-diketimine) cyclophanes versus tripodal tri-β-aminoenones. Cyclophanes bearing Me, Et, and MeO cap substituents and β-Me, Et, or Ph arm substituents are obtained, and a modified condensation method produced α-Me β-Me cyclophane. These operationally simple procedures produce the ligands in gram quantities and in 22-94% yields.

Paramagnetic Organocobalt Capsule Revealing Xenon Host-Guest Chemistry

We investigated Xe binding in a previously reported paramagnetic metal-organic tetrahedral capsule, [Co4L6]4-, where L2- = 4,4'-bis[(2-pyridinylmethylene)amino][1,1'-biphenyl]-2,2'-disulfonate. The Xe-inclusion complex, [XeCo4L6]4-, was confirmed by 1H NMR spectroscopy to be the dominant species in aqueous solution saturated with Xe gas. The measured Xe dissociation rate in [XeCo4L6]4-, koff = 4.45(5) × 102 s-1, was at least 40 times greater than that in the analogous [XeFe4L6]4- complex, highlighting the capability of metal-ligand interactions to tune the capsule size and guest permeability. The rapid exchange of 129Xe nuclei in [XeCo4L6]4- produced significant hyperpolarized 129Xe chemical exchange saturation transfer (hyper-CEST) NMR signal at 298 K, detected at a concentration of [XeCo4L6]4- as low as 100 pM, with presaturation at -89 ppm, which was referenced to solvated 129Xe in H2O. The saturation offset was highly temperature-dependent with a slope of -0.41(3) ppm/K, which is attributed to hyperfine interactions between the encapsulated 129Xe nucleus and electron spins on the four CoII centers. As such, [XeCo4L6]4- represents the first example of a paramagnetic hyper-CEST (paraHYPERCEST) sensor. Remarkably, the hyper-CEST 129Xe NMR resonance for [XeCo4L6]4- (δ = -89 ppm) was shifted 105 ppm upfield from the diamagnetic analogue [XeFe4L6]4- (δ = +16 ppm). The Xe inclusion complex was further characterized in the crystal structure of (C(NH2)3)4[Xe0.7Co4L6]·75 H2O (1). Hydrogen bonding between capsule-linker sulfonate groups and exogenous guanidinium cations, (C(NH2)3)+, stabilized capsule-capsule interactions in the solid state and also assisted in trapping a Xe atom (∼42 Å3) in the large (135 Å3) cavity of 1. Magnetic susceptibility measurements confirmed the presence of four noninteracting, magnetically anisotropic high-spin CoII centers in 1. Furthermore, [Co4L6]4- was found to be stable toward aggregation and oxidation, and the CEST performance of [XeCo4L6]4- was unaffected by biological macromolecules in H2O. These results recommend metal-organic capsules for fundamental investigations of Xe host-guest chemistry as well as applications with highly sensitive 129Xe-based sensors.

Formation of Unsymmetrical Trinuclear Metallamacrocycles Based on Two Different Cone Calix[4]arene Macrocyclic Rings

A combination of tetrasulfonylcalix[4]arene (3-4H) together with a calix[4]arene dicarboxylate derivative 2-4H led, in the presence of MII(NO3)2 (M = Co, Ni, Zn), to the formation of three novel isostructural metallomacrocycles of formula [M3(DMF)2(μ3-H2O)-(2-2H)-3]. The structure of the prepared coordination compounds was studied in the solid state using single crystal/powder X-ray diffraction studies. The X-ray diffraction on single crystal revealed that the structure of the obtained supramolecular complexes is composed of a trinuclear metallic cluster [M3]+6 held between one di-deprotonated molecule of (2-2H)2− offering two carboxylate groups for binding metal cations and one tetra-deprotonated compound 34−, where four oxygen atoms, belonging to four deprotonated phenolic moieties and three oxygen atoms coming from three SO2 groups, are coordinated with the cluster core. Thus, an example of an easily reproducible molecular recognition pattern involving two different types of calix[4]arene based ligands, displaying different coordination moieties, and trinuclear metallic clusters, is reported here. In addition, it has been shown that the cone moieties of the calixarene also encapsulate solvent molecules.

Synthesis of Metallopolymers and Direct Visualization of the Single Polymer Chain

During the past few decades, the study of the single polymer chain has attracted considerable attention with the goal of exploring the structure-property relationship of polymers. It still, however, remains challenging due to the variability and low atomic resolution of the amorphous single polymer chain. Here, we demonstrated a new strategy to visualize the single metallopolymer chain with a hexameric or trimeric supramolecule as a repeat unit, in which Ru(II) with strong coordination and Fe(II) with weak coordination were combined together in a stepwise manner. With the help of ultrahigh-vacuum, low-temperature scanning tunneling microscopy (UHV-LT-STM) and scanning tunneling spectroscopy (STS), we were able to directly visualize both Ru(II) and Fe(II), which act as staining reagents on the repeat units, thus providing detailed structural information for the single polymer chain. As such, the direct visualization of the single random polymer chain is realized to enhance the characterization of polymers at the single-molecule level.

Temperature-mediated molecular ladder self-assembly employing Diels–Alder cycloaddition

Thermal annealing of sequence-defined, maleimide- and furan-bearing oligomers enables sequence-selective hybridization to afford molecular ladders incorporating Diels–Alder adduct-based rungs.

In Situ Cyclization of Proteins (INCYPRO): Cross-Link Derivatization Modulates Protein Stability

Protein macrocyclization represents a very efficient strategy to increase the stability of protein tertiary structures. Here, we describe a panel of novel C3-symmetric tris-electrophilic agents and their use for the cyclization of proteins. These electrophiles are reacted with a protein domain harboring three solvent-exposed cysteine residues, resulting in the in situ cyclization of the protein (INCYPRO). We observe a clear dependency of cross-linking rates on the electrophilicity. All nine obtained cross-linked protein versions show considerably increased thermal stability (up to 29 °C increased melting temperature) when compared to that of the linear precursor. Most interestingly, the degree of stabilization correlates with the hydrophilicity of the cross-link. These results will support the development of novel cross-linked proteins and enable a more rational design process.

Dynamic Covalent Switches and Communicating Networks for Tunable Multicolor Luminescent Systems and Vapor-Responsive Materials

Molecular switches are an intensive area of research, and in particular, the control of multistate switching is challenging. Herein we introduce a general and versatile strategy of dynamic covalent switches and communicating networks, wherein distinct states of reversible covalent systems can induce addressable fluorescence switching. The regulation of intramolecular ring/chain equilibrium, intermolecular dynamic covalent reactions (DCRs) with amines, and both permitted the activation of optical switches. The variation in electron-withdrawing competition between the fluorophore and 2-formylbenzenesulfonyl unit afforded diverse signaling patterns. The combination of switches in situ further enabled the creation of communicating networks for multistate color switching, including white emission, through the delicate control of DCRs in complex mixtures. Finally, reversible and recyclable multiresponsive luminescent materials were achieved with molecular networks on the solid support, allowing visualization of different types of vapors and quantification of primary amine vapors with high sensitivity and wide detection range. The results reported herein should be appealing for future studies of dynamic assemblies, molecular sensing, intelligent materials, and biological labeling.

fac-Re(CO)3-based neutral heteroleptic tetrahedrons

Four new flexible ditopic nitrogen donors possessing a xylene spacer and 2-phenylbenzimidazolyl or its derivatives as a coordinating unit and one rigid bis-chelating ligand consisting of two 2-hydroxyphenylbenzimidazolyl motifs and a central phenylene spacer were synthesized and further used with Re₂(CO)₁₀ for making a new family of neutral, heteroleptic tetrahedral-shaped supramolecular coordination complexes via a one-pot approach. The new ligands and the complexes were characterized using various analytical and spectroscopic methods. The molecular structures of the complexes were determined using single crystal X-ray diffraction analysis, which reveal that four rhenium cores are arranged in the vertices, and four ligands are at the edges of the tetrahedron.

Rare Example of Stereoisomeric 2 + 2 Metallacycles of Porphyrins Featuring Chiral-at-Metal Octahedral Ruthenium Corners

In this paper, we describe three new stereoisomers of the already known 2 + 2 metallacycle of porphyrins [ trans, cis, cis-RuCl₂(CO)₂(4' cisDPyP)]₂ (2, 4' cisDPyP = 5,10-bis(4'-pyridyl)-15,20-diphenylporphyrin), namely [{ trans,cis,cis-RuCl₂(CO)₂}(4' cisDPyP)₂{ cis,cis,cis-RuCl₂(CO)₂}] (14) and [ cis,cis,cis-RuCl₂(CO)₂(4' cisDPyP)]₂ (15), in which the chiral { cis,cis,cis-RuCl₂(CO)₂} fragment has either a C or A handedness. The least abundant 15 exists as a mixture of two stereoisomers defined as alternate (15_alt, both porphyrins are trans to a Cl and a CO) and pairwise (15_pw, one porphyrin is trans to two chlorides and the other to two carbonyls), each one as a statistical mixture of meso ( AC) and racemic ( AA and CC) diastereomers. Remarkably, both 14 and 15 are-to the best of our knowledge-unprecedented examples of 2D metallacycles with octahedral chiral-at-metal connectors, and 14 is the first example of a 2 + 2 molecular square with stereoisomeric Ru(II) corners. Whereas 2 is selectively obtained by treatment of trans,cis,cis-RuCl₂(CO)₂(dmso-O)₂ (1) with 4' cisDPyP, 14 and 15 were obtained, together with 2 (major product), using stereoisomers of 1, either cis,cis,trans-RuCl₂(CO)₂(dmso-S)₂ (5) or cis,cis,cis-RuCl₂(CO)₂(dmso)₂ (6), as precursors. From a general point of view, this work demonstrates that-even for the smallest 2 + 2 metallacycle and using a symmetric organic linker-several stereoisomers can be generated when using octahedral metal connectors of the type {MA₂B₂} that are not stereochemically rigid. As a proof-of-concept, it also opens the way to new-even though challenging-opportunities: unprecedented and yet unexplored chiral metallosupramolecular assemblies can be obtained and eventually exploited (e.g., for supramolecular catalysis) by using stereogenic octahedral metal connectors amenable to become chiral centers.

Insight into the Transimination Process in the Fabrication of Surface Schiff-Based Covalent Organic Frameworks

The on-surface synthesis of single-layered covalent organic frameworks (sCOFs) has been investigated by employing a 3-fold symmetric monomer 1 carrying aldehyde groups and the ditopic diamine building block 2 on a highly oriented pyrolytic graphite surface. The self-assembly of molecule 1 is persistently observed at the stoichiometric ratio of the reactive groups. The growth of sCOF network is observed, however, only at the excess of diamine monomers. By investigating the growth process of the sCOF network, the role of excessive diamine monomers can be understood by two aspects. Increasing the molar ratio of diamine monomer provides the driving force for the structural transition from the monomer self-assembly to the formation of the sCOF network. On the other hand, the excess diamine monomers provide basic environment for the transimination reaction and promote the formation of highly ordered sCOFs. The present work provides molecular understanding of the role of transimination reaction in imine-based COF synthesis.

Coordination-driven self-assembly vs dynamic covalent chemistry: versatile methods for the synthesis of molecular metallarectangles

Supramolecular coordination assemblies have a range of potential applications in chemical and biological sciences. Herein, simple modular methods for the synthesis of metallarectangles are described. The desired tetranuclear metallarectangles were synthesized by using coordination-driven self-assembly of half-sandwich rhodium-based organometallic clip units and organic ligands. The reaction of such an organometallic clip with 4-formylpyridine provided a dinuclear molecular tweezer with pendant aldehyde groups, and subsequent [4 + 4] condensation reactions with diamines provides another route to the target metallarectangles in good yields. The same assemblies can also be easily isolated in one-pot procedures by mixing the organometallic clip, diamines and 4-formylpyridine.

Ring-to-Cage Structural Conversion via Template Effect in a Gold(I) Metallosupramolecular System

A unique example of a ring-to-cage structural conversion in a multinuclear gold(I) coordination system with d-penicillamine (d-H2 pen) is reported. The reaction of [Au2 Cl2 (dppe)] (dppe=1,2-bis(diphenylphosphino)ethane) with d-H2 pen in a 1:1 ratio gave [Au4 (dppe)2 (d-pen)2 ] ([1]), in which two [Au2 (dppe)]2+ units are linked by two d-pen S atoms in a cyclic form so as to have two bidentate-N,O coordination arms. The subsequent reaction of [1] with Cu(OTf)2 afforded [Au4 Cu(dppe)2 (d-pen)2 ]2+ ([2]2+ ), in which a CuII ion is chelated by the two coordination arms in [1] to form an AuI4 CuII bicyclic metallocage. A similar reaction using Cu(NO3 )2 was accompanied by the ring expansion of [1] to [Au8 (dppe)4 (d-pen)4 ], leading to the production of [Au8 Cu2 (dppe)4 (d-pen)4 ]4+ ([3]4+ ). In [3]4+ , two CuII ions are each chelated by the two coordination arms to form an AuI8 CuII2 tricyclic metallocage, accommodating a nitrate ion. The use of Ni(NO3 )2 or Ni(OAc)2 instead of Cu(NO3 )2 commonly gave a tricyclic metallocage of [Au8 Ni2 (dppe)4 (d-pen)4 ]4+ ([4]4+ ), but a water molecule was accommodated inside the AuI8 NiII2 metallocage.

Porous Zr6L3 Metallocage with Synergetic Binding Centers for CO2

Coordination-driven assembly has been widely successful in the synthesis of metallocages and used for many applications, such as catalysis. However, studies on CO₂ adsorption with metallocages have been rarely conducted, compared to other well-known cage-type materials, such as porous organic cages. In this study, a rational choice of ligand and metal led to the synthesis of a Zr₆L₃-type metallocage, exhibiting exceptional CO₂ adsorption properties. CO₂ adsorption experiments revealed that the metallocage shows highly selective adsorption of CO₂ over N₂ with high CO₂ binding energy. Density functional theory calculations uncovered the origin of this exceptional affinity for CO₂ over N₂.

Self-Assembled BODIPY-Based Iridium Metallarectangles: Cytotoxicity and Propensity to Bind Biomolecules

A new 4-ethynylpyridine 4,4-difluoro-4-bora-3a,4a-diaza-s-indacene (BODIPY)-based ligand L, which was synthesized by means of the Sonogashira coupling method, was used to obtain two new [2+2] iridium-based metallarectangles, 3 and 4. Ligand L and metallarectangles 3 and 4 were fully characterized through various analytical techniques. The structure of rectangle 4 was further confirmed by single-crystal X-ray diffraction analysis, which showed the formation of an expected [2+2] supramolecule, in which the iridium metal centers were bridged with ligand L to form the desired metallarectangle 4. In the context of the growing biological interest in metallarectangles, rectangle 4 was found to be highly active against two types of cancer cells, with IC₅₀ values almost threefold superior to those of cisplatin. Both 3 and 4 showed dose-dependent abilities to bind bovine serum albumin and salmon sperm DNA; this indicated their tendency to interact with such biomolecules as a potential mode of action.

Manganese(II), lead(II) and cadmium(II) coordination complexes containing a tetrazole-based acylamide ligand: synthesis and the influence of the metal ions on the structures

Three new manganese(II), lead(II) and cadmium(II) coordination complexes have been prepared by reaction of N-(1H-tetrazol-5-yl)cinnamamide (HNTCA) with divalent metal salts (MnCl2, PbCl2 and CdCl2) in a mixed-solvent system, affording mononuclear to trinuclear structures namely, bis(methanol-κO)bis[5-(3-phenylprop-2-enamido)-1H-1,2,3,4-tetrazol-1-ido-κ2 N 1,O]manganese(II), [Mn(C10H8N5O)2(CH3OH)2], (1), bis[μ-5-(3-phenylprop-2-enamido)-1H-1,2,3,4-tetrazol-1-ido]-κ3 N 1,O:N 2;κ3 N 2:N 1,O-bis{aqua[5-(3-phenylprop-2-enamido)-1H-1,2,3,4-tetrazol-1-ido-κ2 N 1,O]lead(II)}, [Pb2(C10H8N5O)4(H2O)2], (2), and hexakis[μ2-5-(3-phenylprop-2-enamido)-1H-1,2,3,4-tetrazol-1-ido-κ3 N 1,O:N 2]tricadmium(II), [Cd3(C10H8N5O)6], (3). The structures of these three compounds reveal that the nature of the metal ions and the side groups of the organic building blocks have a significant effect on the structures of the coordination compounds formed. Intermolecular hydrogen bonds link the molecules into two-dimensional [complex (1)] and three-dimensional hydrogen-bonded networks. Complexes (2) and (3) show significant fluorescence, while complex (1) displays no fluorescence.

Shape-Persistent [4+4] Imine Cages with a Truncated Tetrahedral Geometry

The synthesis of shape-persistent organic cage compounds is often based on the usage of multiple dynamic covalent bond formation (such as imines) of readily available precursors. By careful choice of the precursors geometry, the geometry and size of the resulting cage can be accurately designed and indeed a number of different geometries and sizes have been realized to date. Despite of this fact, little is known about the precursors conformational rigidity and steric preorganization of reacting functional groups on the outcome of the reaction. Herein, the influence of conformational rigidity in the precursors on the formation of a [4+4] imine cage with truncated tetrahedral geometry is discussed.

Diasteroselective multi-component assemblies from dynamic covalent imine condensation and metal-coordination chemistry: mechanism and narcissistic stereochemistry self-sorting

Self-assembly of a modified tris(2-pyridylmethyl)amine TPMA ligand, zinc(ii) or cobalt(ii) ions, and amino acids have been used effectively as stereo dynamic optical probes for the determination of the enantiomeric excess of free amino acids either using Electronic or Vibrational Circular Dichroism (CD and VCD). Herein, we report the mechanistic and stereochemical study of the self-assembly process which reveals a complex equilibrium in solution where even small variations in the experimental conditions can profoundly affect the final products of the reaction. In particular, variation on the metal stoichiometry switch give rises to an entirely enantio narcissistic self-assembly of the structure.

Enantio narcissistic self-assembly is observed in a multi-metallic structure used as stereodynamic probe for CD measurements.

Supersnowflakes: Stepwise Self-Assembly and Dynamic Exchange of Rhombus Star-Shaped Supramolecules

With the goal of increasing the complexity of metallo-supramolecules, two rhombus star-shaped supramolecular architectures, namely, supersnowflakes, were designed and assembled using multiple 2,2':6',2″-terpyridine (tpy) ligands in a stepwise manner. In the design of multicomponent self-assembly, ditopic and tritopic ligands were bridged through Ru(II) with strong coordination to form metal-organic ligands for the subsequent self-assembly with a hexatopic ligand and Zn(II). The combination of Ru(II)-organic ligands with high stability and Zn(II) ions with weak coordination played a key role in the self-assembly of giant heteroleptic supersnowflakes, which encompassed three types of tpy-based organic ligands and two metal ions. With such a stepwise strategy, the self-sorting of individual building blocks was prevented from forming the undesired assemblies, e.g., small macrocycles and coordination polymers. Furthermore, the intra- and intermolecular dynamic exchange study of two supersnowflakes by NMR and mass spectrometry revealed the remarkable stability of these giant supramolecular complexes.

Structure, solution assembly, and electroconductivity of nanosized argento-organic-cluster/framework templated by chromate

In view of elucidating potential structures and assembly mechanism of silver clusters and silver cluster-based metal-organic frameworks, we prepared four argento-organic-clusters/frameworks where the structures were directed by chromate in the presence of different thiolates. All four structures with ^tBuC₆H₄S^-, SⁱBu^-, and SⁱPr^- consist of three core-shells, an inner CrO₄^2-, an intermediate Ag-S aggregate and finally the protective organic moieties. {(HNEt₃)₃[Ag(CrO₄)₄@Ag₄₆(SC₆H₄^tBu)₂₄(CF₃COO)₁₈(DMF)₄]} (1) is a supertetrahedron with an inner Ag(CrO₄)₄ tetrahedron shelled by four fused Ag_11.5S₆ lobes. [(CrO₄)₅@Ag₄₀(SⁱBu)₂₇(CF₃COO)₃]_n (2) is an undulated snake-like tube housing the infinite CrO₄^2- tetrahedra. [(CrO₄)₂@Ag₄₁(SⁱBu)₃₀(NO₃)₃(CN)₄]_n (3) forms an uncommon 7-connected kwh network incorporating hexagonal layers of Ag₁₉(SⁱBu)₁₅ balls with a single inner CrO₄^2- connected by another Ag atom. Both enantiomeric chiral qtz frameworks of [CrO₄@Ag₂₀(SⁱPr)₁₀(Cr₂O₇)₂(COOCF₃)₄(DMF)₄]_n (4) were structurally characterized. In 4, Cr₂O₇^2- connects the Ag₂₀(SⁱPr)₁₀ clusters with a trapped CrO₄^2- into a 3D quartz (qtz) structure, where the spherical cluster acts like oxygen and Cr₂O₇^2- takes the place of Si in SiO₂. Electrospray ionization mass spectrometry (ESI-MS) analysis of the reaction solutions of 1-4 clearly indicated that (i) the Ag(CrO₄)₄@Ag₄₆ core of 1 can retain its molecular structure in the solution and (ii) the chromate-templated polynuclear silver-thiolate species in solution are important building blocks to construct the 1D or 3D motif for 2-4. The electrochemistry in sulfuric acid and enhancement of the electrical conductivity upon I₂ doping have also been reported.

PdII2L4-type coordination cages up to three nanometers in size

The utilization of large ligands in coordination-based self-assembly represents an attractive strategy for the construction of supramolecular assemblies more than two nanometers in size. However, the implementation of this strategy is hampered by the fact that the preparation of such ligands often requires substantial synthetic effort. Herein, we describe a simple one-step protocol, which allows large bipyridyl ligands with a bent shape to be synthesized from easily accessible and/or commercially available starting materials. The ligands were used to construct PdII2L4-type coordination cages of unprecedented size. Furthermore, we provide evidence that these cages may be stabilized by close intramolecular packing of lipophilic ligand side chains. Packing effects of this kind are frequently encountered in protein assemblies, but they are seldom used as a design element in metallasupramolecular chemistry.

Design of a flexible organometallic tecton: host–guest chemistry with picric acid and self-assembly of platinum macrocycles

A new “flexible” and ditopic Pt(ii) organometallic compound is a tecton for the self-assembly of neutral metallacycles. It also exhibits significant binding affinity for picric acid.

Self-assembly of arene ruthenium acylpyrazolone fragments to tetranuclear metallacycles. Molecular structures and solid-state 15N CPMAS NMR correlations

Mono- and tetranuclear Ru(ii) half-sandwich complexes containing acylpyrazolone ligands. ¹³C and ¹⁵N solid state NMR spectroscopy.