1
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Nicolas C, Ghanem T, Canevet D, Sallé M, Nicol E, Gautier C, Levillain E, Niepceron F, Colombani O. Oxidation-Sensitive Supramolecular Polymer Nanocylinders. Macromolecules 2022. [DOI: 10.1021/acs.macromol.2c00879] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Clémence Nicolas
- Institut des Molécules et Matériaux du Mans (IMMM), UMR 6283 CNRS Le Mans Université, Avenue Olivier Messiaen, 72085 Le Mans Cedex 9, France
- Univ Angers, CNRS, MOLTECH-Anjou, SFR MATRIX, Angers F-49000, France
| | - Tatiana Ghanem
- Univ Angers, CNRS, MOLTECH-Anjou, SFR MATRIX, Angers F-49000, France
| | - David Canevet
- Univ Angers, CNRS, MOLTECH-Anjou, SFR MATRIX, Angers F-49000, France
| | - Marc Sallé
- Univ Angers, CNRS, MOLTECH-Anjou, SFR MATRIX, Angers F-49000, France
| | - Erwan Nicol
- Institut des Molécules et Matériaux du Mans (IMMM), UMR 6283 CNRS Le Mans Université, Avenue Olivier Messiaen, 72085 Le Mans Cedex 9, France
| | | | - Eric Levillain
- Univ Angers, CNRS, MOLTECH-Anjou, SFR MATRIX, Angers F-49000, France
| | - Frédérick Niepceron
- Institut des Molécules et Matériaux du Mans (IMMM), UMR 6283 CNRS Le Mans Université, Avenue Olivier Messiaen, 72085 Le Mans Cedex 9, France
| | - Olivier Colombani
- Institut des Molécules et Matériaux du Mans (IMMM), UMR 6283 CNRS Le Mans Université, Avenue Olivier Messiaen, 72085 Le Mans Cedex 9, France
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2
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Li T, Lu XM, Zhang MR, Hu K, Li Z. Peptide-based nanomaterials: Self-assembly, properties and applications. Bioact Mater 2022; 11:268-282. [PMID: 34977431 PMCID: PMC8668426 DOI: 10.1016/j.bioactmat.2021.09.029] [Citation(s) in RCA: 99] [Impact Index Per Article: 49.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2021] [Revised: 09/21/2021] [Accepted: 09/24/2021] [Indexed: 11/24/2022] Open
Abstract
Peptide-based materials that have diverse structures and functionalities are an important type of biomaterials. In former times, peptide-based nanomaterials with excellent stability were constructed through self-assembly. Compared with individual peptides, peptide-based self-assembly nanomaterials that form well-ordered superstructures possess many advantages such as good thermo- and mechanical stability, semiconductivity, piezoelectricity and optical properties. Moreover, due to their excellent biocompatibility and biological activity, peptide-based self-assembly nanomaterials have been vastly used in different fields. In this review, we provide the advances of peptide-based self-assembly nanostructures, focusing on the driving forces that dominate peptide self-assembly and assembly mechanisms of peptides. After that, we outline the synthesis and properties of peptide-based nanomaterials, followed by the applications of functional peptide nanomaterials. Finally, we provide perspectives on the challenges and future of peptide-based nanomaterials. This review summarizes the advances of peptide-based nanomaterials, focusing on the mechanisms, properties, and applications. Outlining the synthesis and properties of peptide nanomaterials is helpful for the relevant research fields. The peptide-based nanomaterials show potential applications in many fields.
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Affiliation(s)
- Tong Li
- College of Chemistry and Chemical Engineering, Center of Nanoenergy Research, Guangxi University, Nanning, 530004, China.,Beijing Institute of Nanoenergy and Nanosystems, Chinese Academy of Sciences, Beijing, 101400, China
| | - Xian-Mao Lu
- College of Chemistry and Chemical Engineering, Center of Nanoenergy Research, Guangxi University, Nanning, 530004, China.,Beijing Institute of Nanoenergy and Nanosystems, Chinese Academy of Sciences, Beijing, 101400, China.,School of Nanoscience and Technology, University of Chinese Academy of Sciences, Beijing, 101400, China
| | - Ming-Rong Zhang
- Department of Advanced Nuclear Medicine Sciences, The National Institute of Radiological Sciences, The National Institutes for Quantum and Radiological Science and Technology, Chiba, 263-8555, Japan
| | - Kuan Hu
- Beijing Institute of Nanoenergy and Nanosystems, Chinese Academy of Sciences, Beijing, 101400, China.,Department of Advanced Nuclear Medicine Sciences, The National Institute of Radiological Sciences, The National Institutes for Quantum and Radiological Science and Technology, Chiba, 263-8555, Japan
| | - Zhou Li
- College of Chemistry and Chemical Engineering, Center of Nanoenergy Research, Guangxi University, Nanning, 530004, China.,Beijing Institute of Nanoenergy and Nanosystems, Chinese Academy of Sciences, Beijing, 101400, China.,School of Nanoscience and Technology, University of Chinese Academy of Sciences, Beijing, 101400, China
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3
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Méndez-Ardoy A, Insua I, Granja JR, Montenegro J. Cyclization and Self-Assembly of Cyclic Peptides. Methods Mol Biol 2022; 2371:449-466. [PMID: 34596863 DOI: 10.1007/978-1-0716-1689-5_24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/24/2023]
Abstract
Cyclic peptides are a fascinating class of molecules that can be programmed to fold or self-assemble into diverse mono- and multidimensional structures with potential applications in biomedicine, nanoelectronics, or catalysis. Herein we describe on-resin procedures to carry out head-to-tail peptide cyclization based on orthogonal protected linear structures. We also present essential characterization tools for obtaining dynamic and structural information, including the visualization cyclic peptide assembly into nanotubes (AFM, TEM) as well as the use of fluorescence microscopy.
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Affiliation(s)
- Alejandro Méndez-Ardoy
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela, Santiago de Compostela, Spain
| | - Ignacio Insua
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela, Santiago de Compostela, Spain
| | - Juan R Granja
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela, Santiago de Compostela, Spain
| | - Javier Montenegro
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela, Santiago de Compostela, Spain.
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4
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Song Q, Cheng Z, Kariuki M, Hall SCL, Hill SK, Rho JY, Perrier S. Molecular Self-Assembly and Supramolecular Chemistry of Cyclic Peptides. Chem Rev 2021; 121:13936-13995. [PMID: 33938738 PMCID: PMC8824434 DOI: 10.1021/acs.chemrev.0c01291] [Citation(s) in RCA: 63] [Impact Index Per Article: 21.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2020] [Indexed: 01/19/2023]
Abstract
This Review focuses on the establishment and development of self-assemblies governed by the supramolecular interactions between cyclic peptides. The Review first describes the type of cyclic peptides able to assemble into tubular structures to form supramolecular cyclic peptide nanotubes. A range of cyclic peptides have been identified to have such properties, including α-peptides, β-peptides, α,γ-peptides, and peptides based on δ- and ε-amino acids. The Review covers the design and functionalization of these cyclic peptides and expands to a recent advance in the design and application of these materials through their conjugation to polymer chains to generate cyclic peptide-polymer conjugates nanostructures. The Review, then, concentrates on the challenges in characterizing these systems and presents an overview of the various analytical and characterization techniques used to date. This overview concludes with a critical survey of the various applications of the nanomaterials obtained from supramolecular cyclic peptide nanotubes, with a focus on biological and medical applications, ranging from ion channels and membrane insertion to antibacterial materials, anticancer drug delivery, gene delivery, and antiviral applications.
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Affiliation(s)
- Qiao Song
- Department
of Chemistry, University of Warwick, Coventry CV4 7AL, U.K.
| | - Zihe Cheng
- Department
of Chemistry, University of Warwick, Coventry CV4 7AL, U.K.
| | - Maria Kariuki
- Department
of Chemistry, University of Warwick, Coventry CV4 7AL, U.K.
| | | | - Sophie K. Hill
- Department
of Chemistry, University of Warwick, Coventry CV4 7AL, U.K.
| | - Julia Y. Rho
- Department
of Chemistry, University of Warwick, Coventry CV4 7AL, U.K.
| | - Sébastien Perrier
- Department
of Chemistry, University of Warwick, Coventry CV4 7AL, U.K.
- Warwick Medical
School, University of Warwick, Coventry CV4 7AL, U.K.
- Faculty
of Pharmacy and Pharmaceutical Sciences, Monash University, Parkville, Victoria 3052, Australia
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5
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Novelli F, Vilela M, Pazó A, Amorín M, Granja JR. Molecular Plumbing to Bend Self‐Assembling Peptide Nanotubes. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202107034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Federica Novelli
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Organic Chemistry Department Universidade de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Marcos Vilela
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Organic Chemistry Department Universidade de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Antía Pazó
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Organic Chemistry Department Universidade de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Manuel Amorín
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Organic Chemistry Department Universidade de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Juan R. Granja
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Organic Chemistry Department Universidade de Santiago de Compostela 15782 Santiago de Compostela Spain
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6
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Novelli F, Vilela M, Pazó A, Amorín M, Granja JR. Molecular Plumbing to Bend Self-Assembling Peptide Nanotubes. Angew Chem Int Ed Engl 2021; 60:18838-18844. [PMID: 34185371 PMCID: PMC8456905 DOI: 10.1002/anie.202107034] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2021] [Indexed: 12/11/2022]
Abstract
Light-induced molecular piping of cyclic peptide nanotubes to form bent tubular structures is described. The process is based on the [4+4] photocycloaddition of anthracene moieties, whose structural changes derived from the interdigitated flat disposition of precursors to the corresponding cycloadduct moieties, induced the geometrical modifications in nanotubes packing that provokes their curvature. For this purpose, we designed a new class of cyclic peptide nanotubes formed by β- and α-amino acids. The presence of the former predisposes the peptide to stack in a parallel fashion with the β-residues aligned along the nanotube and the homogeneous distribution of anthracene pendants.
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Affiliation(s)
- Federica Novelli
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Organic Chemistry DepartmentUniversidade de Santiago de Compostela15782Santiago de CompostelaSpain
| | - Marcos Vilela
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Organic Chemistry DepartmentUniversidade de Santiago de Compostela15782Santiago de CompostelaSpain
| | - Antía Pazó
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Organic Chemistry DepartmentUniversidade de Santiago de Compostela15782Santiago de CompostelaSpain
| | - Manuel Amorín
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Organic Chemistry DepartmentUniversidade de Santiago de Compostela15782Santiago de CompostelaSpain
| | - Juan R. Granja
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Organic Chemistry DepartmentUniversidade de Santiago de Compostela15782Santiago de CompostelaSpain
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7
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Kurita T, Terabayashi T, Kimura S, Numata K, Uji H. Construction and Piezoelectric Properties of a Single-Peptide Nanotube Composed of Cyclic β-peptides with Helical Peptides on the Side Chains. Biomacromolecules 2021; 22:2815-2821. [PMID: 34000810 DOI: 10.1021/acs.biomac.1c00213] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
To develop nanopiezoelectronics, it is necessary to investigate the relationship between the sizes and piezoelectric properties of the material. Peptide nanotubes (PNTs) composed of cyclic β-peptides have been studied as leading candidates for nanopiezoelectric materials. The current drawback of PNTs is aggregation to form a PNT bundle structure due to strong dipole-dipole interactions between PNTs. Here, we report the construction and piezoelectric properties of single PNTs without nonspecific aggregation by side-chain modification of helical peptides. A cyclic tri-β-peptide with a helical peptide was prepared by multiple-step liquid-phase peptide synthesis and assembled into PNTs by the vapor diffusion method. These nanotubes were characterized by polarized light microscopy and Fourier transform infrared (FTIR) spectroscopy. Additionally, atomic force microscopy (AFM) topographic images showed nanotubes with a height of 4 nm, which corresponds to the diameter of a PNT on a gold-coated mica substrate, indicating that a single PNT was prepared successfully. The converted piezoelectric response of a single PNT was determined to be 1.39 ± 0.12 pm/V. This value was consistent with that of a PNT bundle, which reveals that the piezoelectricity of PNTs is induced by deformation of their cyclic skeletons and is independent of the bundled structure. This finding not only demonstrates a new molecular design strategy to construct these smallest piezoelectric biomaterials by controlling the supramolecular hierarchical structures but also provides insights into the correlation between molecular assembly morphology and size-dependent piezoelectric properties.
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Affiliation(s)
- Taichi Kurita
- Department of Material Chemistry, Graduate School of Engineering, Kyoto University, Katsura, Nishikyo-ku, Kyoto 615-8510, Japan
| | - Tomoaki Terabayashi
- Department of Material Chemistry, Graduate School of Engineering, Kyoto University, Katsura, Nishikyo-ku, Kyoto 615-8510, Japan
| | - Shunsaku Kimura
- Department of Material Chemistry, Graduate School of Engineering, Kyoto University, Katsura, Nishikyo-ku, Kyoto 615-8510, Japan
| | - Keiji Numata
- Department of Material Chemistry, Graduate School of Engineering, Kyoto University, Katsura, Nishikyo-ku, Kyoto 615-8510, Japan.,Biomacromolecules Research Team, RIKEN Center for Sustainable Resource Science, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan
| | - Hirotaka Uji
- Department of Material Chemistry, Graduate School of Engineering, Kyoto University, Katsura, Nishikyo-ku, Kyoto 615-8510, Japan
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8
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Calvelo M, Lynch CI, Granja JR, Sansom MSP, Garcia-Fandiño R. Effect of Water Models on Transmembrane Self-Assembled Cyclic Peptide Nanotubes. ACS NANO 2021; 15:7053-7064. [PMID: 33739081 PMCID: PMC8485350 DOI: 10.1021/acsnano.1c00155] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/06/2021] [Accepted: 03/15/2021] [Indexed: 05/23/2023]
Abstract
Self-assembling cyclic peptide nanotubes can form nanopores when they are inserted in lipid bilayers, acting as ion and/or water permeable channels. In order to improve the versatility of these systems, it is possible to specifically design cyclic peptides with a combination of natural and non-natural amino acids, enabling the control of the nature of the inner cavity of the channels. Here, the behavior of two types of self-assembling peptide motifs, alternating α-amino acids with γ- or δ-aminocycloalkanecarboxylic acids, is studied via molecular dynamics (MD) simulations. The behavior of water molecules in nanopores is expected to affect the properties of these channels and therefore merits detailed examination. A number of water models commonly used in MD simulations have been validated by how well they reproduce bulk water properties. However, it is less clear how these water models behave in the nanoconfined condition inside a channel. The behavior of four different water models-TIP3P, TIP4P, TIP4P/2005, and OPC-are evaluated in MD simulations of self-assembled cyclic peptide nanotubes of distinct composition and diameter. The dynamic behavior of the water molecules and ions in these designed artificial channels depends subtly on the water model used. TIP3P water molecules move faster than those of TIP4P, TIP4P/2005, and OPC. This demeanor is clearly observed in the filling of the nanotube, in water diffusion within the pore, and in the number and stability of hydrogen bonds of the peptides with water. It was also shown that the water model influences the simulated ion flux through the nanotubes, with TIP3P producing the greatest ion flux. Additionally, the two more recent models, TIP4P/2005 and OPC, which are known to reproduce the experimental self-diffusion coefficient of bulk water quite well, exhibit very similar results under the nanoconfined conditions studied here. Because none of these models have been parametrized specifically for waters confined in peptide nanotubes, this study provides a point of reference for further validation.
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Affiliation(s)
- Martin Calvelo
- Center
for Research in Biological Chemistry and Molecular Materials (CIQUS), University of Santiago de Compostela, 15782 Santiago
de Compostela, Spain
| | - Charlotte I. Lynch
- Department
of Biochemistry, University of Oxford, South Parks Road, Oxford OX1 3QU, United Kingdom
| | - Juan R. Granja
- Center
for Research in Biological Chemistry and Molecular Materials (CIQUS), University of Santiago de Compostela, 15782 Santiago
de Compostela, Spain
| | - Mark S. P. Sansom
- Department
of Biochemistry, University of Oxford, South Parks Road, Oxford OX1 3QU, United Kingdom
| | - Rebeca Garcia-Fandiño
- Center
for Research in Biological Chemistry and Molecular Materials (CIQUS), University of Santiago de Compostela, 15782 Santiago
de Compostela, Spain
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9
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Gruschwitz FV, Klein T, Catrouillet S, Brendel JC. Supramolecular polymer bottlebrushes. Chem Commun (Camb) 2020; 56:5079-5110. [PMID: 32347854 DOI: 10.1039/d0cc01202e] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
The field of supramolecular chemistry has long been known to generate complex materials of different sizes and shapes via the self-assembly of single or multiple low molar mass building blocks. Matching the complexity found in natural assemblies, however, remains a long-term challenge considering its precision in organizing large macromolecules into well-defined nanostructures. Nevertheless, the increasing understanding of supramolecular chemistry has paved the way to several attempts in arranging synthetic macromolecules into larger ordered structures based on non-covalent forces. This review is a first attempt to summarize the developments in this field, which focus mainly on the formation of one-dimensional, linear, cylindrical aggregates in solution with pendant polymer chains - therefore coined supramolecular polymer bottlebrushes in accordance with their covalent equivalents. Distinguishing by the different supramolecular driving forces, we first describe systems based on π-π interactions, which comprise, among others, the well-known perylene motif, but also the early attempts using cyclophanes. However, the majority of reported supramolecular polymer bottlebrushes are formed by hydrogen bonds as they can for example be found in linear and cyclic peptides, as well as so called sticker molecules containing multiple urea groups. Besides this overview on the reported motifs and their impact on the resulting morphology of the polymer nanostructures, we finally highlight the potential benefits of such non-covalent interactions and refer to promising future directions of this still mostly unrecognized field of supramolecular research.
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Affiliation(s)
- Franka V Gruschwitz
- Laboratory of Organic and Macromolecular Chemistry (IOMC), Friedrich Schiller University Jena, Humboldtstraße 10, 07743 Jena, Germany.
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10
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Calvelo M, Lamas A, Guerra A, Amorín M, Garcia-Fandino R, Granja JR. Parallel Versus Antiparallel β-Sheet Structure in Cyclic Peptide Hybrids Containing γ- or δ-Cyclic Amino Acids. Chemistry 2020; 26:5846-5858. [PMID: 31999874 DOI: 10.1002/chem.201905554] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2019] [Indexed: 11/07/2022]
Abstract
Cyclic peptides with disc-shaped structures have emerged as potent building blocks for the preparation of new biomaterials in fields ranging from biological to material science. In this work, we analyze in depth the self-assembling properties of a new type of cyclic peptides based on the alternation of α-residues and cyclic δ-amino acids (α,δ-CPs). To examine the preferred stacking properties adopted by cyclic peptides bearing this type of amino acids, we carried out a synergistic in vitro/in silico approximation by using simple dimeric models and then extended to nanotubes. Although these new cyclic peptides (α,δ-CPs) can interact either in a parallel or antiparallel fashion, our results confirm that although the parallel β-sheet is more stable, it can be switched to the antiparallel stacking by choosing residues that can establish favorable cross-strand interactions. Moreover, the subsequent comparison by using the same methodology but applied to α,γ-CPs models, up to the moment assumed as antiparallel-like d,l-α-CPs, led to unforeseen conclusions that put into question preliminary conjectures about these systems. Surprisingly, they tend to adopt a parallel β-sheet directed by the skeleton interactions. These results imply a change of paradigm with respect to cyclic peptide designs that should be considered for dimers and nanotubes.
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Affiliation(s)
- Martín Calvelo
- Centro Singular de Investigación en Química Biolóxica e, Materiais Moleculares (CIQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela, 15782, Santiago de Compostela, Spain
| | - Alejandro Lamas
- Centro Singular de Investigación en Química Biolóxica e, Materiais Moleculares (CIQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela, 15782, Santiago de Compostela, Spain
| | - Arcadio Guerra
- Centro Singular de Investigación en Química Biolóxica e, Materiais Moleculares (CIQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela, 15782, Santiago de Compostela, Spain
| | - Manuel Amorín
- Centro Singular de Investigación en Química Biolóxica e, Materiais Moleculares (CIQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela, 15782, Santiago de Compostela, Spain
| | - Rebeca Garcia-Fandino
- Centro Singular de Investigación en Química Biolóxica e, Materiais Moleculares (CIQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela, 15782, Santiago de Compostela, Spain
| | - Juan R Granja
- Centro Singular de Investigación en Química Biolóxica e, Materiais Moleculares (CIQUS), Departamento de Química Orgánica, Universidade de Santiago de Compostela, 15782, Santiago de Compostela, Spain
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11
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Pochkaeva EI, Podolsky NE, Zakusilo DN, Petrov AV, Charykov NA, Vlasov TD, Penkova AV, Vasina LV, Murin IV, Sharoyko VV, Semenov KN. Fullerene derivatives with amino acids, peptides and proteins: From synthesis to biomedical application. PROG SOLID STATE CH 2020. [DOI: 10.1016/j.progsolidstchem.2019.100255] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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12
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Shimizu T, Ding W, Kameta N. Soft-Matter Nanotubes: A Platform for Diverse Functions and Applications. Chem Rev 2020; 120:2347-2407. [PMID: 32013405 DOI: 10.1021/acs.chemrev.9b00509] [Citation(s) in RCA: 103] [Impact Index Per Article: 25.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
Self-assembled organic nanotubes made of single or multiple molecular components can be classified into soft-matter nanotubes (SMNTs) by contrast with hard-matter nanotubes, such as carbon and other inorganic nanotubes. To date, diverse self-assembly processes and elaborate template procedures using rationally designed organic molecules have produced suitable tubular architectures with definite dimensions, structural complexity, and hierarchy for expected functions and applications. Herein, we comprehensively discuss every functions and possible applications of a wide range of SMNTs as bulk materials or single components. This Review highlights valuable contributions mainly in the past decade. Fifteen different families of SMNTs are discussed from the viewpoints of chemical, physical, biological, and medical applications, as well as action fields (e.g., interior, wall, exterior, whole structure, and ensemble of nanotubes). Chemical applications of the SMNTs are associated with encapsulating materials and sensors. SMNTs also behave, while sometimes undergoing morphological transformation, as a catalyst, template, liquid crystal, hydro-/organogel, superhydrophobic surface, and micron size engine. Physical functions pertain to ferro-/piezoelectricity and energy migration/storage, leading to the applications to electrodes or supercapacitors, and mechanical reinforcement. Biological functions involve artificial chaperone, transmembrane transport, nanochannels, and channel reactors. Finally, medical functions range over drug delivery, nonviral gene transfer vector, and virus trap.
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Affiliation(s)
- Toshimi Shimizu
- Nanomaterials Research Institute, Department of Materials and Chemistry , National Institute of Advanced Industrial Science and Technology , Tsukuba Central 5, 1-1-1 Higashi , Tsukuba , Ibaraki 305-8565 , Japan
| | - Wuxiao Ding
- Nanomaterials Research Institute, Department of Materials and Chemistry , National Institute of Advanced Industrial Science and Technology , Tsukuba Central 5, 1-1-1 Higashi , Tsukuba , Ibaraki 305-8565 , Japan
| | - Naohiro Kameta
- Nanomaterials Research Institute, Department of Materials and Chemistry , National Institute of Advanced Industrial Science and Technology , Tsukuba Central 5, 1-1-1 Higashi , Tsukuba , Ibaraki 305-8565 , Japan
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13
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Pizzi A, Ozores HL, Calvelo M, García‐Fandiño R, Amorín M, Demitri N, Terraneo G, Bracco S, Comotti A, Sozzani P, Bezuidenhout CX, Metrangolo P, Granja JR. Tight Xenon Confinement in a Crystalline Sandwich‐like Hydrogen‐Bonded Dimeric Capsule of a Cyclic Peptide. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201906599] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Andrea Pizzi
- Laboratory of Supramolecular and Bio-Nanomaterials, (SupraBioNanoLab) Department of Chemistry, Materials, and Chemical Engineering “Giulio Natta” Politecnico di Milano 20131 Milano Italy
| | - Haxel Lionel Ozores
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica Universidad de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Martín Calvelo
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica Universidad de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Rebeca García‐Fandiño
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica Universidad de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Manuel Amorín
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica Universidad de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Nicola Demitri
- Elettra—Sincrotrone Trieste S.S. 14 Km 163.5 in Area Science Park 34149 Basovizza— Trieste Italy
| | - Giancarlo Terraneo
- Laboratory of Supramolecular and Bio-Nanomaterials, (SupraBioNanoLab) Department of Chemistry, Materials, and Chemical Engineering “Giulio Natta” Politecnico di Milano 20131 Milano Italy
| | - Silvia Bracco
- Department of Materials Science University of Milano Bicocca Via R. Cozzi 55 20125 Milan Italy
| | - Angiolina Comotti
- Department of Materials Science University of Milano Bicocca Via R. Cozzi 55 20125 Milan Italy
| | - Piero Sozzani
- Department of Materials Science University of Milano Bicocca Via R. Cozzi 55 20125 Milan Italy
| | - Charl X. Bezuidenhout
- Department of Materials Science University of Milano Bicocca Via R. Cozzi 55 20125 Milan Italy
| | - Pierangelo Metrangolo
- Laboratory of Supramolecular and Bio-Nanomaterials, (SupraBioNanoLab) Department of Chemistry, Materials, and Chemical Engineering “Giulio Natta” Politecnico di Milano 20131 Milano Italy
| | - Juan R. Granja
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica Universidad de Santiago de Compostela 15782 Santiago de Compostela Spain
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14
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Pizzi A, Ozores HL, Calvelo M, García‐Fandiño R, Amorín M, Demitri N, Terraneo G, Bracco S, Comotti A, Sozzani P, Bezuidenhout CX, Metrangolo P, Granja JR. Tight Xenon Confinement in a Crystalline Sandwich‐like Hydrogen‐Bonded Dimeric Capsule of a Cyclic Peptide. Angew Chem Int Ed Engl 2019; 58:14472-14476. [PMID: 31418497 DOI: 10.1002/anie.201906599] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2019] [Revised: 08/14/2019] [Indexed: 01/21/2023]
Affiliation(s)
- Andrea Pizzi
- Laboratory of Supramolecular and Bio-Nanomaterials, (SupraBioNanoLab) Department of Chemistry, Materials, and Chemical Engineering “Giulio Natta” Politecnico di Milano 20131 Milano Italy
| | - Haxel Lionel Ozores
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica Universidad de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Martín Calvelo
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica Universidad de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Rebeca García‐Fandiño
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica Universidad de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Manuel Amorín
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica Universidad de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Nicola Demitri
- Elettra—Sincrotrone Trieste S.S. 14 Km 163.5 in Area Science Park 34149 Basovizza— Trieste Italy
| | - Giancarlo Terraneo
- Laboratory of Supramolecular and Bio-Nanomaterials, (SupraBioNanoLab) Department of Chemistry, Materials, and Chemical Engineering “Giulio Natta” Politecnico di Milano 20131 Milano Italy
| | - Silvia Bracco
- Department of Materials Science University of Milano Bicocca Via R. Cozzi 55 20125 Milan Italy
| | - Angiolina Comotti
- Department of Materials Science University of Milano Bicocca Via R. Cozzi 55 20125 Milan Italy
| | - Piero Sozzani
- Department of Materials Science University of Milano Bicocca Via R. Cozzi 55 20125 Milan Italy
| | - Charl X. Bezuidenhout
- Department of Materials Science University of Milano Bicocca Via R. Cozzi 55 20125 Milan Italy
| | - Pierangelo Metrangolo
- Laboratory of Supramolecular and Bio-Nanomaterials, (SupraBioNanoLab) Department of Chemistry, Materials, and Chemical Engineering “Giulio Natta” Politecnico di Milano 20131 Milano Italy
| | - Juan R. Granja
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica Universidad de Santiago de Compostela 15782 Santiago de Compostela Spain
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15
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16
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Lamas A, Guerra A, Amorín M, Granja JR. New self-assembling peptide nanotubes of large diameter using δ-amino acids. Chem Sci 2018; 9:8228-8233. [PMID: 30542571 PMCID: PMC6240800 DOI: 10.1039/c8sc02276c] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2018] [Accepted: 08/26/2018] [Indexed: 11/21/2022] Open
Abstract
Here we show that 4-aminocyclohexanecarboxylic acid is a rigid stretcher building block for the preparation of cyclic peptides that self-assemble to form peptide nanotubes with large diameter and hydrophobic pores. The hydrophobic properties of the resulting nanotubes provided by the two methylene groups per δ-residue allow the encapsulation of C60 moieties forming a new type of bionanopeapod structure.
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Affiliation(s)
- Alejandro Lamas
- Singular Research Centre in Chemical Biology and Molecular Materials, (CIQUS) , Organic Chemistry Department , University of Santiago de Compostela (USC) , 15782 Santiago de Compostela , Spain . ;
| | - Arcadio Guerra
- Singular Research Centre in Chemical Biology and Molecular Materials, (CIQUS) , Organic Chemistry Department , University of Santiago de Compostela (USC) , 15782 Santiago de Compostela , Spain . ;
| | - Manuel Amorín
- Singular Research Centre in Chemical Biology and Molecular Materials, (CIQUS) , Organic Chemistry Department , University of Santiago de Compostela (USC) , 15782 Santiago de Compostela , Spain . ;
| | - Juan R Granja
- Singular Research Centre in Chemical Biology and Molecular Materials, (CIQUS) , Organic Chemistry Department , University of Santiago de Compostela (USC) , 15782 Santiago de Compostela , Spain . ;
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17
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Tabata Y, Uji H, Imai T, Kimura S. Two one-dimensional arrays of naphthyl and anthryl groups along peptide nanotubes prepared from cyclic peptides comprising α- and β-amino acids. SOFT MATTER 2018; 14:7597-7604. [PMID: 30215660 DOI: 10.1039/c8sm01627e] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
A novel cyclic hexapeptide composed of l-α-naphthylalanine, d-α-anthrylalanine, and four β-alanines (CP6) is synthesized and its molecular assembly into peptide nanotubes (PNTs) and the electronic properties arising from one-dimensional arrays of aromatic groups along the PNTs were investigated. CP6 with a combination of l- and d-α-amino acids is designed to self-assemble into PNTs with them stacking on top of each other under the constraint of maximizing the number of intermolecular hydrogen bonds between the cyclic peptides. Upon PNT formation, the respective side chains of l- and d-α-amino acids are aligned in line along the PNTs. The topological arrangement of the anthryl groups being in close proximity in the CP6 PNT is supported by higher photo-excited energy transfer, appearance of the induced Cotton effects, and the promoted photo-dimerization reaction upon PNT formation. AFM observations reveal that PNT bundles with diameters 5-15 nm are dielectric microcrystals having a piezoelectric coefficient of 2-6 pC N-1. Kelvin force microscopy observations show the generation of surface potentials over 100 mV owing to the one-dimensional array of the anthryl groups along PNTs. Incorporation of α-amino acids with opposite chirality into cyclic β-peptides is therefore an effective molecular design for the nano-architecture of PNTs displaying one-dimensional arrays of chromophores along PNTs.
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Affiliation(s)
- Yuki Tabata
- Department of Material Chemistry, Graduate School of Engineering, Kyoto University, Kyoto-Daigaku-Katsura, Nishikyo-ku, Kyoto 615-8510, Japan.
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18
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Busseau A, Villegas C, Dabos-Seignon S, Hudhomme P, Legoupy S. Enhanced Penta(organo)[60]fullerenes by Electroactive Donor Units for Supramolecular Polymers. European J Org Chem 2018. [DOI: 10.1002/ejoc.201801042] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Antoine Busseau
- CNRS UMR 6200; Laboratoire MOLTECH-Anjou; Université d′Angers; 2 Bd Lavoisier 49045 Angers Cedex France
| | - Carmen Villegas
- CNRS UMR 6200; Laboratoire MOLTECH-Anjou; Université d′Angers; 2 Bd Lavoisier 49045 Angers Cedex France
| | - Sylvie Dabos-Seignon
- CNRS UMR 6200; Laboratoire MOLTECH-Anjou; Université d′Angers; 2 Bd Lavoisier 49045 Angers Cedex France
| | - Piétrick Hudhomme
- CNRS UMR 6200; Laboratoire MOLTECH-Anjou; Université d′Angers; 2 Bd Lavoisier 49045 Angers Cedex France
| | - Stéphanie Legoupy
- CNRS UMR 6200; Laboratoire MOLTECH-Anjou; Université d′Angers; 2 Bd Lavoisier 49045 Angers Cedex France
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19
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Fuertes A, Juanes M, Granja JR, Montenegro J. Supramolecular functional assemblies: dynamic membrane transporters and peptide nanotubular composites. Chem Commun (Camb) 2018. [PMID: 28636028 DOI: 10.1039/c7cc02997g] [Citation(s) in RCA: 55] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
The fabrication of functional molecular devices constitutes one of the most important current challenges for chemical sciences. The complex processes accomplished by living systems continuously demand the assistance of non-covalent interactions between molecular building blocks. Additionally, these building blocks (proteins, membranes, nucleotides) are also constituted by self-assembled structures. Therefore, supramolecular chemistry is the discipline required to understand the properties of the minimal self-assembled building blocks of living systems and to develop new functional smart materials. In the first part of this feature article, we highlight selected examples of the preparation of supramolecular membrane transporters with special emphasis on the application of dynamic covalent bonds. In the second section of the paper we review recent breakthroughs in the preparation of peptide nanotube hybrids with functional applications. The development of these devices constitutes an exciting process from where we can learn how to understand and manipulate supramolecular functional assemblies.
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Affiliation(s)
- Alberto Fuertes
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica, Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Spain.
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20
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Rodríguez-Vázquez N, García-Fandiño R, Aldegunde MJ, Brea J, Loza MI, Amorín M, Granja JR. cis-Platinum Complex Encapsulated in Self-Assembling Cyclic Peptide Dimers. Org Lett 2017; 19:2560-2563. [PMID: 28471680 DOI: 10.1021/acs.orglett.7b00871] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Abstract
A new cyclic peptide dimer that encapsulates cisplatin complexes in its internal cavity is described. The resulting complex showed cytotoxic activity at A2780 ovarian cancer cell lines independent of acquired platinum resistance.
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Affiliation(s)
- Nuria Rodríguez-Vázquez
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica, Universidade de Santiago de Compostela , 15782 Santiago de Compostela, Spain
| | - Rebeca García-Fandiño
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica, Universidade de Santiago de Compostela , 15782 Santiago de Compostela, Spain.,CIQUP, Department of Chemistry and Biochemistry, Faculdade de Ciencias, Universidade do Porto , 4169-007 Porto, Portugal
| | - María J Aldegunde
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica, Universidade de Santiago de Compostela , 15782 Santiago de Compostela, Spain
| | - José Brea
- Centro Singular de Investigación en Medicina Molecular y Enfermedades Crónicas (CIMUS) and Department of Pharmacology, Universidade de Santiago de Compostela , 15782 Santiago de Compostela, Spain
| | - María Isabel Loza
- Centro Singular de Investigación en Medicina Molecular y Enfermedades Crónicas (CIMUS) and Department of Pharmacology, Universidade de Santiago de Compostela , 15782 Santiago de Compostela, Spain
| | - Manuel Amorín
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica, Universidade de Santiago de Compostela , 15782 Santiago de Compostela, Spain
| | - Juan R Granja
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica, Universidade de Santiago de Compostela , 15782 Santiago de Compostela, Spain
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21
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Awada H, Grison CM, Charnay-Pouget F, Baltaze JP, Brisset F, Guillot R, Robin S, Hachem A, Jaber N, Naoufal D, Yazbeck O, Aitken DJ. Conformational Effects through Hydrogen Bonding in a Constrained γ-Peptide Template: From Intraresidue Seven-Membered Rings to a Gel-Forming Sheet Structure. J Org Chem 2017; 82:4819-4828. [PMID: 28398045 DOI: 10.1021/acs.joc.7b00494] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
A series of three short oligomers (di-, tri-, and tetramers) of cis-2-(aminomethyl)cyclobutane carboxylic acid, a γ-amino acid featuring a cyclobutane ring constraint, were prepared, and their conformational behavior was examined spectroscopically and by molecular modeling. In dilute solutions, these peptides showed a number of low-energy conformers, including ribbonlike structures pleated around a rarely observed series of intramolecular seven-membered hydrogen bonds. In more concentrated solutions, these interactions defer to an organized supramolecular assembly, leading to thermoreversible organogel formation notably for the tripeptide, which produced fibrillar xerogels. In the solid state, the dipeptide adopted a fully extended conformation featuring a one-dimensional network of intermolecularly H-bonded molecules stacked in an antiparallel sheet alignment. This work provides unique insight into the interplay between inter- and intramolecular H-bonded conformer topologies for the same peptide template.
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Affiliation(s)
- Hawraà Awada
- CP3A Organic Synthesis Group and Services Communs, ICMMO, UMR 8182, CNRS, Université Paris Sud, Université Paris Saclay , Bât. 420, 15 rue Georges Clemenceau, 91405 Orsay cedex, France.,Inorganic and Organometallic Coordination Chemistry Laboratory and Laboratory for Medicinal Chemistry and Natural Products, Faculty of Sciences (I) & PRASE-EDST, Lebanese University , Hadath, Lebanon
| | - Claire M Grison
- CP3A Organic Synthesis Group and Services Communs, ICMMO, UMR 8182, CNRS, Université Paris Sud, Université Paris Saclay , Bât. 420, 15 rue Georges Clemenceau, 91405 Orsay cedex, France
| | - Florence Charnay-Pouget
- CP3A Organic Synthesis Group and Services Communs, ICMMO, UMR 8182, CNRS, Université Paris Sud, Université Paris Saclay , Bât. 420, 15 rue Georges Clemenceau, 91405 Orsay cedex, France
| | - Jean-Pierre Baltaze
- CP3A Organic Synthesis Group and Services Communs, ICMMO, UMR 8182, CNRS, Université Paris Sud, Université Paris Saclay , Bât. 420, 15 rue Georges Clemenceau, 91405 Orsay cedex, France
| | - François Brisset
- CP3A Organic Synthesis Group and Services Communs, ICMMO, UMR 8182, CNRS, Université Paris Sud, Université Paris Saclay , Bât. 420, 15 rue Georges Clemenceau, 91405 Orsay cedex, France
| | - Régis Guillot
- CP3A Organic Synthesis Group and Services Communs, ICMMO, UMR 8182, CNRS, Université Paris Sud, Université Paris Saclay , Bât. 420, 15 rue Georges Clemenceau, 91405 Orsay cedex, France
| | - Sylvie Robin
- CP3A Organic Synthesis Group and Services Communs, ICMMO, UMR 8182, CNRS, Université Paris Sud, Université Paris Saclay , Bât. 420, 15 rue Georges Clemenceau, 91405 Orsay cedex, France.,UFR Sciences Pharmaceutiques et Biologiques, Université Paris Descartes , 4 avenue de l'Observatoire, 75270 Paris cedex 06, France
| | - Ali Hachem
- Inorganic and Organometallic Coordination Chemistry Laboratory and Laboratory for Medicinal Chemistry and Natural Products, Faculty of Sciences (I) & PRASE-EDST, Lebanese University , Hadath, Lebanon
| | - Nada Jaber
- Inorganic and Organometallic Coordination Chemistry Laboratory and Laboratory for Medicinal Chemistry and Natural Products, Faculty of Sciences (I) & PRASE-EDST, Lebanese University , Hadath, Lebanon
| | - Daoud Naoufal
- Inorganic and Organometallic Coordination Chemistry Laboratory and Laboratory for Medicinal Chemistry and Natural Products, Faculty of Sciences (I) & PRASE-EDST, Lebanese University , Hadath, Lebanon
| | - Ogaritte Yazbeck
- Inorganic and Organometallic Coordination Chemistry Laboratory and Laboratory for Medicinal Chemistry and Natural Products, Faculty of Sciences (I) & PRASE-EDST, Lebanese University , Hadath, Lebanon
| | - David J Aitken
- CP3A Organic Synthesis Group and Services Communs, ICMMO, UMR 8182, CNRS, Université Paris Sud, Université Paris Saclay , Bât. 420, 15 rue Georges Clemenceau, 91405 Orsay cedex, France
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22
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Fuertes A, Ozores HL, Amorín M, Granja JR. Self-assembling Venturi-like peptide nanotubes. NANOSCALE 2017; 9:748-753. [PMID: 27973623 DOI: 10.1039/c6nr08174f] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
We describe the design and synthesis of self-assembling peptide nanotubes that have an internal filter area and whose length and internal diameters, at the entrance and in the constricted area, are precisely controlled.
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Affiliation(s)
- Alberto Fuertes
- Singular Research Centre in Chemical Biology and Molecular Materials, (CIQUS), Organic Chemistry Department, University of Santiago de Compostela (USC), 15782 Santiago de Compostela, Spain.
| | - Haxel Lionel Ozores
- Singular Research Centre in Chemical Biology and Molecular Materials, (CIQUS), Organic Chemistry Department, University of Santiago de Compostela (USC), 15782 Santiago de Compostela, Spain.
| | - Manuel Amorín
- Singular Research Centre in Chemical Biology and Molecular Materials, (CIQUS), Organic Chemistry Department, University of Santiago de Compostela (USC), 15782 Santiago de Compostela, Spain.
| | - Juan R Granja
- Singular Research Centre in Chemical Biology and Molecular Materials, (CIQUS), Organic Chemistry Department, University of Santiago de Compostela (USC), 15782 Santiago de Compostela, Spain.
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23
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Rodríguez-Vázquez N, Amorín M, Granja JR. Recent advances in controlling the internal and external properties of self-assembling cyclic peptide nanotubes and dimers. Org Biomol Chem 2017; 15:4490-4505. [DOI: 10.1039/c7ob00351j] [Citation(s) in RCA: 59] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
Tuning the internal and external properties of self-assembling cyclic peptide nanotubes.
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Affiliation(s)
- N. Rodríguez-Vázquez
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica
- Universidade de Santiago de Compostela
- 15782 Santiago de Compostela
- Spain
| | - M. Amorín
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica
- Universidade de Santiago de Compostela
- 15782 Santiago de Compostela
- Spain
| | - J. R. Granja
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica
- Universidade de Santiago de Compostela
- 15782 Santiago de Compostela
- Spain
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24
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Calvelo M, Vázquez S, García-Fandiño R. Molecular dynamics simulations for designing biomimetic pores based on internally functionalized self-assembling α,γ-peptide nanotubes. Phys Chem Chem Phys 2016; 17:28586-601. [PMID: 26443433 DOI: 10.1039/c5cp04200c] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
A molecular dynamics study on internally functionalized peptide nanotubes composed of α- and γ-amino acids self-assembled in lipid bilayers is presented. One of the main advantages of peptide nanotubes composed of γ-amino acids is that the properties of their inner cavities can be tuned by introducing different functions on β-carbon of the γ-amino acid. In the work described here we studied the effect of the presence of different numbers of hydroxyl groups in different positions in the lumen of these channels when they are inserted into a lipid bilayer and assessed how they affect the structural and dynamic behavior of the modified peptide nanotubes as well as the transmembrane transport of different ions. The results provided atomic information about the effect of polar groups on the dynamic, structural and transport properties of this type of peptidic channel upon insertion into lipid bilayers, projecting a promising future for their use as biomimetic channels when properly inner-derivatized. Furthermore, the chemical versatility of the hydroxyl groups in the lumen of the peptide nanotubes would enable appealing applications for these channels, such as a controlled method for the activation/inactivation of the transmembrane transport along the nanopore.
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Affiliation(s)
- Martín Calvelo
- Department of Organic Chemistry, Center for Research in Biological Chemistry and Molecular Materials, Campus Vida, Santiago de Compostela University, E-15782 Santiago de Compostela, Spain.
| | - Saulo Vázquez
- Department of Physical Chemistry, Center for Research in Biological Chemistry and Molecular Materials, Campus Vida, Santiago de Compostela University, E-15782 Santiago de Compostela, Spain
| | - Rebeca García-Fandiño
- Department of Organic Chemistry, Center for Research in Biological Chemistry and Molecular Materials, Campus Vida, Santiago de Compostela University, E-15782 Santiago de Compostela, Spain.
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25
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Mejías SH, López-Andarias J, Sakurai T, Yoneda S, Erazo KP, Seki S, Atienza C, Martín N, Cortajarena AL. Repeat protein scaffolds: ordering photo- and electroactive molecules in solution and solid state. Chem Sci 2016; 7:4842-4847. [PMID: 29732049 PMCID: PMC5905405 DOI: 10.1039/c6sc01306f] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2016] [Accepted: 05/23/2016] [Indexed: 01/15/2023] Open
Abstract
The precise control over the organization of photoactive components at the nanoscale is one of the main challenges for the generation of new and sophisticated macroscopically ordered materials with enhanced properties. In this work we present a novel bioinspired approach using protein-based building blocks for the arrangement of photo- and electroactive porphyrin derivatives. We used a designed repeat protein scaffold with demonstrated unique features that allow for the control of their structure, functionality, and assembly. Our designed domains act as exact biomolecular templates to organize porphyrin molecules at the required distance. The hybrid conjugates retain the structure and assembly properties of the protein scaffold and display the spectroscopic features of orderly aggregated porphyrins along the protein structure. Finally, we achieved a solid ordered bio-organic hybrid thin film with anisotropic photoconductivity.
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Affiliation(s)
- Sara H Mejías
- IMDEA-Nanoscience , Campus de Cantoblanco , E-28049 Madrid , Spain
| | - Javier López-Andarias
- Departamento de Química Orgánica I , Facultad de Ciencias Químicas , Universidad Complutense de Madrid , E-28040 Madrid , Spain .
| | - Tsuneaki Sakurai
- Department of Applied Chemistry , Graduate School of Engineering , Osaka University , Japan
| | - Satoru Yoneda
- Department of Applied Chemistry , Graduate School of Engineering , Osaka University , Japan
| | - Kevin P Erazo
- IMDEA-Nanoscience , Campus de Cantoblanco , E-28049 Madrid , Spain
| | - Shu Seki
- Department of Applied Chemistry , Graduate School of Engineering , Osaka University , Japan
| | - Carmen Atienza
- Departamento de Química Orgánica I , Facultad de Ciencias Químicas , Universidad Complutense de Madrid , E-28040 Madrid , Spain .
| | - Nazario Martín
- IMDEA-Nanoscience , Campus de Cantoblanco , E-28049 Madrid , Spain
- Departamento de Química Orgánica I , Facultad de Ciencias Químicas , Universidad Complutense de Madrid , E-28040 Madrid , Spain .
| | - Aitziber L Cortajarena
- IMDEA-Nanoscience , Campus de Cantoblanco , E-28049 Madrid , Spain
- CIC biomaGUNE , Paseo de Miramón 182 , E-20009 Donostia-San Sebastian , Spain
- Ikerbasque , Basque Foundation for Science , Ma Díaz de Haro 3 , E-48013 Bilbao , Spain
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26
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Tabata Y, Mitani S, Kimura S. Peptide nanotube aligning side chains onto one side. J Pept Sci 2016; 22:391-6. [DOI: 10.1002/psc.2881] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2016] [Revised: 03/08/2016] [Accepted: 03/09/2016] [Indexed: 12/20/2022]
Affiliation(s)
- Yuki Tabata
- Department of Material Chemistry, Graduate School of Engineering; Kyoto University; Kyoto-Daigaku-Katsura Nishikyo-ku Kyoto 615-8510 Japan
| | - Shota Mitani
- Department of Material Chemistry, Graduate School of Engineering; Kyoto University; Kyoto-Daigaku-Katsura Nishikyo-ku Kyoto 615-8510 Japan
| | - Shunsaku Kimura
- Department of Material Chemistry, Graduate School of Engineering; Kyoto University; Kyoto-Daigaku-Katsura Nishikyo-ku Kyoto 615-8510 Japan
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27
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Busseau A, Villegas C, Dabos-Seignon S, Cabanetos C, Hudhomme P, Legoupy S. New Penta(tetrathiafulvalenyl)[60]fullerenes for Supramolecular Materials. Chemistry 2016; 22:8452-6. [DOI: 10.1002/chem.201601038] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2016] [Indexed: 11/11/2022]
Affiliation(s)
- Antoine Busseau
- Laboratoire MOLTECH-Anjou, CNRS UMR 6200; Université d'Angers; 2 Boulevard Lavoisier 49045 Angers France
| | - Carmen Villegas
- Laboratoire MOLTECH-Anjou, CNRS UMR 6200; Université d'Angers; 2 Boulevard Lavoisier 49045 Angers France
| | - Sylvie Dabos-Seignon
- Laboratoire MOLTECH-Anjou, CNRS UMR 6200; Université d'Angers; 2 Boulevard Lavoisier 49045 Angers France
| | - Clément Cabanetos
- Laboratoire MOLTECH-Anjou, CNRS UMR 6200; Université d'Angers; 2 Boulevard Lavoisier 49045 Angers France
| | - Piétrick Hudhomme
- Laboratoire MOLTECH-Anjou, CNRS UMR 6200; Université d'Angers; 2 Boulevard Lavoisier 49045 Angers France
| | - Stéphanie Legoupy
- Laboratoire MOLTECH-Anjou, CNRS UMR 6200; Université d'Angers; 2 Boulevard Lavoisier 49045 Angers France
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28
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Insuasty A, Atienza C, López JL, Martín N. Supramolecular pentapeptide-based fullerene nanofibers: effect of molecular chirality. Chem Commun (Camb) 2016; 51:10506-9. [PMID: 26037709 DOI: 10.1039/c5cc01991e] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
The supramolecular organization of new fullerene derivatives endowed with peptides as biomolecular templates affords ordered nanofibers of several micrometres length based on hydrogen bonds and π-π interactions.
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Affiliation(s)
- Alberto Insuasty
- Departamento de Química Orgánica, Facultad de C. C. Químicas, Universidad Complutense de Madrid, 28040 Madrid, Spain.
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29
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López-Andarias J, Bolag A, Nançoz C, Vauthey E, Atienza C, Sakai N, Martín N, Matile S. Electron-deficient fullerenes in triple-channel photosystems. Chem Commun (Camb) 2016; 51:7543-5. [PMID: 25846676 DOI: 10.1039/c5cc01551k] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Fullerenes of increasing electron deficiency are designed, synthesized and evaluated in multicomponent surface architectures to ultimately build gradients in LUMO levels with nine components over 350 meV down to -4.22 eV.
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Affiliation(s)
- Javier López-Andarias
- Departamento de Química Orgánica, Universidad Complutense, IMDEA-Nanoscience, Madrid, Spain.
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30
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Rodríguez-Vázquez N, Fuertes A, Amorín M, Granja JR. Bioinspired Artificial Sodium and Potassium Ion Channels. Met Ions Life Sci 2016; 16:485-556. [DOI: 10.1007/978-3-319-21756-7_14] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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31
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Designed Repeat Proteins as Building Blocks for Nanofabrication. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2016; 940:61-81. [DOI: 10.1007/978-3-319-39196-0_4] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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32
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Almohammed S, Oladapo SO, Ryan K, Kholkin AL, Rice JH, Rodriguez BJ. Wettability gradient-induced alignment of peptide nanotubes as templates for biosensing applications. RSC Adv 2016. [DOI: 10.1039/c6ra05732b] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Peptide nanotubes coated with silver nanoparticles and aligned using wettability-patterned substrates provide improved Raman intensity for biosensing applications.
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Affiliation(s)
- Sawsan Almohammed
- School of Physics
- University College Dublin
- Dublin 4
- Ireland
- Conway Institute of Biomolecular and Biomedical Research
| | | | - Kate Ryan
- School of Physics
- University College Dublin
- Dublin 4
- Ireland
- Conway Institute of Biomolecular and Biomedical Research
| | - Andrei L. Kholkin
- Department of Physics & CICECO – Aveiro Institute of Materials
- 3810-193 Aveiro
- Portugal
- Institute of Natural Sciences
- Ural Federal University
| | - James H. Rice
- School of Physics
- University College Dublin
- Dublin 4
- Ireland
| | - Brian J. Rodriguez
- School of Physics
- University College Dublin
- Dublin 4
- Ireland
- Conway Institute of Biomolecular and Biomedical Research
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33
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Rodríguez-Vázquez N, García-Fandiño R, Amorín M, Granja JR. Self-assembling α,γ-cyclic peptides that generate cavities with tunable properties. Chem Sci 2016; 7:183-187. [PMID: 28757999 PMCID: PMC5515055 DOI: 10.1039/c5sc03187g] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2015] [Accepted: 09/11/2015] [Indexed: 11/22/2022] Open
Abstract
The design and synthesis of β-sheet-based self-assembling cyclic peptides with tunable cavities is described. The incorporation of a γ-amino acid with a hydroxyl group at C2 allows the incorporation of different groups that modify the internal properties of the resulting dimeric ensemble. These dimers can entrap different guests depending on the properties of the group at C2. The guest defines the geometry of the resulting aggregate.
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Affiliation(s)
- Nuria Rodríguez-Vázquez
- Singular Research Centre in Chemical Biology and Molecular Materials , (CIQUS) , Organic Chemistry Department , University of Santiago de Compostela (USC) , 15782 Santiago de Compostela , Spain
| | - Rebeca García-Fandiño
- Singular Research Centre in Chemical Biology and Molecular Materials , (CIQUS) , Organic Chemistry Department , University of Santiago de Compostela (USC) , 15782 Santiago de Compostela , Spain
| | - Manuel Amorín
- Singular Research Centre in Chemical Biology and Molecular Materials , (CIQUS) , Organic Chemistry Department , University of Santiago de Compostela (USC) , 15782 Santiago de Compostela , Spain
| | - Juan R Granja
- Singular Research Centre in Chemical Biology and Molecular Materials , (CIQUS) , Organic Chemistry Department , University of Santiago de Compostela (USC) , 15782 Santiago de Compostela , Spain
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34
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Cuerva M, García-Fandiño R, Vázquez-Vázquez C, López-Quintela MA, Montenegro J, Granja JR. Self-Assembly of Silver Metal Clusters of Small Atomicity on Cyclic Peptide Nanotubes. ACS NANO 2015; 9:10834-10843. [PMID: 26439906 DOI: 10.1021/acsnano.5b03445] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Subnanometric noble metal clusters, composed by only a few atoms, behave like molecular entities and display magnetic, luminescent and catalytic activities. However, noncovalent interactions of molecular metal clusters, lacking of any ligand or surfactant, have not been seen at work. Theoretically attractive and experimentally discernible, van der Waals forces and noncovalent interactions at the metal/organic interfaces will be crucial to understand and develop the next generation of hybrid nanomaterials. Here, we present experimental and theoretical evidence of noncovalent interactions between subnanometric metal (0) silver clusters and aromatic rings and their application in the preparation of 1D self-assembled hybrid architectures with ditopic peptide nanotubes. Atomic force microscopy, fluorescence experiments, circular dichroism and computational simulations verified the occurrence of these interactions in the clean and mild formation of a novel peptide nanotube and metal cluster hybrid material. The findings reported here confirmed the sensitivity of silver metal clusters of small atomicity toward noncovalent interactions, a concept that could find multiple applications in nanotechnology. We conclude that induced supramolecular forces are optimal candidates for the precise spatial positioning and properties modulation of molecular metal clusters. The reported results herein outline and generalize the possibilities that noncovalent interactions will have in this emerging field.
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Affiliation(s)
- Miguel Cuerva
- Technological Research Institute (IIT), Physical Chemistry Department, University of Santiago de Compostela (USC) , Santiago de Compostela 15782, Spain
| | - Rebeca García-Fandiño
- Center for Research in Biological Chemistry and Molecular Materials (CIQUS), Organic Chemistry Department, University of Santiago de Compostela (USC) , Santiago de Compostela 15782, Spain
| | - Carlos Vázquez-Vázquez
- Technological Research Institute (IIT), Physical Chemistry Department, University of Santiago de Compostela (USC) , Santiago de Compostela 15782, Spain
| | - M Arturo López-Quintela
- Technological Research Institute (IIT), Physical Chemistry Department, University of Santiago de Compostela (USC) , Santiago de Compostela 15782, Spain
| | - Javier Montenegro
- Center for Research in Biological Chemistry and Molecular Materials (CIQUS), Organic Chemistry Department, University of Santiago de Compostela (USC) , Santiago de Compostela 15782, Spain
| | - Juan R Granja
- Center for Research in Biological Chemistry and Molecular Materials (CIQUS), Organic Chemistry Department, University of Santiago de Compostela (USC) , Santiago de Compostela 15782, Spain
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35
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Kincer MR, Choudhury R, Srinivasarao M, Beckham HW, Briggs GAD, Porfyrakis K, Bucknall DG. Shear alignment of fullerenes in nanotubular supramolecular complexes. POLYMER 2015. [DOI: 10.1016/j.polymer.2014.11.058] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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36
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Danial M, Perrier S, Jolliffe KA. Effect of the amino acid composition of cyclic peptides on their self-assembly in lipid bilayers. Org Biomol Chem 2015; 13:2464-73. [DOI: 10.1039/c4ob02041c] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
The effect of amino acid composition on the formation of transmembrane channels in lipid bilayers upon self-assembly of alt-(l,d)-α-cyclic octapeptides has been investigated.
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Affiliation(s)
- Maarten Danial
- Key Centre for Polymers & Colloids
- The University of Sydney
- School of Chemistry
- Sydney NSW 2006
- Australia
| | - Sébastien Perrier
- Key Centre for Polymers & Colloids
- The University of Sydney
- School of Chemistry
- Sydney NSW 2006
- Australia
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37
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Aragay G, Ventura B, Guerra A, Pintre I, Chiorboli C, García-Fandiño R, Flamigni L, Granja JR, Ballester P. Self-Sorting of cyclic peptide homodimers into a heterodimeric assembly featuring an efficient photoinduced intramolecular electron-transfer process. Chemistry 2014; 20:3427-38. [PMID: 24677609 DOI: 10.1002/chem.201304200] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2013] [Indexed: 11/07/2022]
Abstract
We describe the thermodynamic characterisation of the self-sorting process experienced by two homodimers assembled by hydrogen-bonding interactions through their cyclopeptide scaffolds and decorated with Zn-porphyrin and fullerene units into a heterodimeric assembly that contains one electron-donor (Zn–porphyrin) and one electron-acceptor group (fullerene). The fluorescence of the Zn-porphyrin unit is strongly quenched upon heterodimer formation. This phenomenon is demonstrated to be the result of an efficient photoinduced electron-transfer (PET) process occurring between the Zn-porphyrin and the fullerene units of the heterodimeric system. The recombination lifetime of the charge-separated state of the heterodimer complex is in the order of 180 ns. In solution, both homo- and heterodimers are present as a mixture of three regioisomers: two staggered and one eclipsed. At the concentration used for this study, the high stability constant determined for the heterodimer suggests that the eclipsed conformer is the main component in solution. The application of the bound-state scenario allowed us to calculate that the heterodimer exists mainly as the eclipsed regioisomer (75-90 %). The attractive interaction that exists between the donor and acceptor chromophores in the heterodimeric assembly favours their arrangement in close contact. This is confirmed by the presence of charge-transfer bands centred at 720 nm in the absorption spectrum of the heterodimer. PET occurs in approximately 75% of the chromophores after excitation of both Zn-porphyrin and fullerene chromophores. Conversely, analogous systems, reported previously, decorated with extended tetrathiafulvalene and fullerene units showed a PET process in a significantly reduced extent (33%). We conclude that the strength (stability constant (K) x effective molarity (EM)) of the intramolecular interaction established between the two chromophores in the Zn-porphyrin/fullerene cyclopeptide-based heterodimers controls the regioisomeric distribution and regulates the high extent to which the PET process takes place in this system.
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38
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Panciera M, Amorín M, Granja JR. Molecular Pom Poms from Self-Assembling α,γ-Cyclic Peptides. Chemistry 2014; 20:10260-5. [DOI: 10.1002/chem.201403319] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2014] [Indexed: 02/02/2023]
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39
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Montenegro J, Vázquez-Vázquez C, Kalinin A, Geckeler KE, Granja JR. Coupling of Carbon and Peptide Nanotubes. J Am Chem Soc 2014; 136:2484-91. [DOI: 10.1021/ja410901r] [Citation(s) in RCA: 63] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Affiliation(s)
- Javier Montenegro
- Singular
Research Centre in Chemical Biology and Molecular Materials (CIQUS),
Organic Chemistry Department, University of Santiago de Compostela (USC), Santiago de Compostela 15782, Spain
| | - Carlos Vázquez-Vázquez
- Technological
Research Institute (IIT), Physical Chemistry Department, University of Santiago de Compostela (USC), Santiago de Compostela 15782, Spain
| | - Arseny Kalinin
- NT-MDT and Moscow Institute of Physics and Technology (MIPT), Moscow 117810, Russia
| | - Kurt E. Geckeler
- Department of Materials Science and Engineering Gwangju Institute of Science & Technology, Oryong-dong, Buk-gu, Gwangju 500-712, South Korea
| | - Juan R. Granja
- Singular
Research Centre in Chemical Biology and Molecular Materials (CIQUS),
Organic Chemistry Department, University of Santiago de Compostela (USC), Santiago de Compostela 15782, Spain
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40
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Maity I, Parmar HS, Rasale DB, Das AK. Self-programmed nanovesicle to nanofiber transformation of a dipeptide appended bolaamphiphile and its dose dependent cytotoxic behaviour. J Mater Chem B 2014; 2:5272-5279. [DOI: 10.1039/c4tb00365a] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
A fluorescent nanostructured peptide bolaamphiphile hydrogel shows dose-dependent behaviour towards cytotoxicity and cell-proliferation.
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Affiliation(s)
- Indrajit Maity
- Department of Chemistry
- Indian Institute of Technology Indore
- Indore, India
| | | | | | - Apurba K. Das
- Department of Chemistry
- Indian Institute of Technology Indore
- Indore, India
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41
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Jennepalli S, Pyne SG, Keller PA. [60]Fullerenyl amino acids and peptides: a review of their synthesis and applications. RSC Adv 2014. [DOI: 10.1039/c4ra07310j] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
This review reports on the latest progress in the synthesis of fullerenyl amino acids and related derivatives, and categorises the molecules into functional types for different uses: these include directly attached fullerenyl amino acids, fullerenyl N- and C-capping amino acids, and those amino acids in which the [60]fullerene group is attached to the amino acid side chain.
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Affiliation(s)
- Sreenu Jennepalli
- School of Chemistry
- University of Wollongong
- Wollongong, Australia
- ARC Centre of Excellence for Electromaterials Science
- University of Wollongong
| | - Stephen G. Pyne
- School of Chemistry
- University of Wollongong
- Wollongong, Australia
| | - Paul A. Keller
- School of Chemistry
- University of Wollongong
- Wollongong, Australia
- ARC Centre of Excellence for Electromaterials Science
- University of Wollongong
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42
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Li F, Yager KG, Dawson NM, Yang J, Malloy KJ, Qin Y. Complementary Hydrogen Bonding and Block Copolymer Self-Assembly in Cooperation toward Stable Solar Cells with Tunable Morphologies. Macromolecules 2013. [DOI: 10.1021/ma4016399] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Affiliation(s)
- Fei Li
- Department of Chemistry & Chemical Biology, University of New Mexico, MSC03 2060, 1 UNM, Albuquerque, New Mexico 87131, United States
| | - Kevin G. Yager
- Center
for Functional Nanomaterials, Brookhaven National Laboratory, Bldg. 735, P.O. Box 5000, Upton, New York 11973, United States
| | - Noel M. Dawson
- Center
for High Technology Materials, University of New Mexico, MSC04 2710, 1 UNM, Albuquerque, New Mexico 87106, United States
- Nanoscience
and Microsystems Engineering, University of New Mexico, MSC01 1120, 1 UNM, Albuquerque, New Mexico 87131, United States
| | - Jianzhong Yang
- Department of Chemistry & Chemical Biology, University of New Mexico, MSC03 2060, 1 UNM, Albuquerque, New Mexico 87131, United States
| | - Kevin J. Malloy
- Center
for High Technology Materials, University of New Mexico, MSC04 2710, 1 UNM, Albuquerque, New Mexico 87106, United States
| | - Yang Qin
- Department of Chemistry & Chemical Biology, University of New Mexico, MSC03 2060, 1 UNM, Albuquerque, New Mexico 87131, United States
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43
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Kamlet AS, Préville C, Farley KA, Piotrowski DW. Regioselective hydroarylations and parallel kinetic resolution of Vince lactam. Angew Chem Int Ed Engl 2013; 52:10607-10. [PMID: 23956102 DOI: 10.1002/anie.201304818] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2013] [Indexed: 01/08/2023]
Abstract
Two regioselective and complementary hydroarylation reactions of an unsymmetrical cyclic olefin have been developed. The products can be transformed in one step into constrained γ-amino acids. Regioselective arylation of Vince lactam is controlled by the choice of phosphine ligand enantiomer and the substituent on the amide nitrogen atom. The method was extended to a general regiodivergent parallel kinetic resolution of the racemic lactam.
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Affiliation(s)
- Adam S Kamlet
- Worldwide Medicinal Chemistry, Pfizer Inc. Eastern Point Road, Groton, CT 06340 (USA).
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44
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Kamlet AS, Préville C, Farley KA, Piotrowski DW. Regioselective Hydroarylations and Parallel Kinetic Resolution of Vince Lactam. Angew Chem Int Ed Engl 2013. [DOI: 10.1002/ange.201304818] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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45
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Travaglini L, D'Annibale A, di Gregorio MC, Schillén K, Olsson U, Sennato S, Pavel NV, Galantini L. Between peptides and bile acids: self-assembly of phenylalanine substituted cholic acids. J Phys Chem B 2013; 117:9248-57. [PMID: 23844889 DOI: 10.1021/jp405342v] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Biocompatible molecules that undergo self-assembly are of high importance in biological and medical applications of nanoscience. Peptides and bile acids are among the most investigated due to their ability to self-organize into many different, often stimuli-sensitive, supramolecular structures. With the aim of preparing molecules mixing the aggregation properties of bile acid and amino acid-based molecules, we report on the synthesis and self-association behavior of two diastereomers obtained by substituting a hydroxyl group of cholic acid with a l-phenylalanine residue. The obtained molecules are amphoteric, and we demonstrate that they show a pH-dependent self-assembly. Both molecules aggregate in globular micelles at high pH, whereas they form tubular superstructures under acid conditions. Unusual narrow nanotubes with outer and inner cross-section diameters of about 6 and 3 nm are formed by the derivatives. The diasteroisomer with α orientation of the substituent forms in addition a wider tubule (17 nm cross-section diameter). The ability to pack in supramolecular tubules is explained in terms of a wedge-shaped bola-form structure of the derivatives. Parallel or antiparallel face-to-face dimers are hypothesized as fundamental building blocks for the formation of the narrow and wide nanotubes, respectively.
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Affiliation(s)
- Leana Travaglini
- Department of Chemistry, Sapienza University of Rome, P.le Aldo Moro 5, 00185 Rome, Italy
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46
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Travaglini L, D'Annibale A, Schillén K, Olsson U, Sennato S, Pavel NV, Galantini L. Amino acid-bile acid based molecules: extremely narrow surfactant nanotubes formed by a phenylalanine-substituted cholic acid. Chem Commun (Camb) 2013; 48:12011-3. [PMID: 23133832 DOI: 10.1039/c2cc36030f] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
An amino acid-substituted bile acid forms tubular aggregates with inner and outer diameters of about 3 and 6 nm. The diameters are unusually small for surfactant self-assembled tubes. The results enhance the spectrum of applications of supramolecular tubules and open up possibilities for investigating a novel class of biological amphiphiles.
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Affiliation(s)
- Leana Travaglini
- Department of Chemistry, Sapienza University of Rome, P.le Aldo Moro 5, 00185 Rome, Italy
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47
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Rodríguez-Vázquez N, Salzinger S, Silva LF, Amorín M, Granja JR. Synthesis of Cyclic γ-Amino Acids for Foldamers and Peptide Nanotubes. European J Org Chem 2013. [DOI: 10.1002/ejoc.201201565] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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48
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Panciera M, Amorín M, Castedo L, Granja JR. Design of Stable β-Sheet-Based Cyclic Peptide Assemblies Assisted by Metal Coordination: Selective Homo- and Heterodimer Formation. Chemistry 2013; 19:4826-34. [DOI: 10.1002/chem.201203213] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2012] [Revised: 12/14/2012] [Indexed: 11/08/2022]
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49
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Lin Z, Li L, Yang Y, Zhan H, Hu Y, Zhou Z, Zhu J, Wang Q, Deng J. The self-assembly of cystine-bridged γ-peptide-based cyclic peptide–dendron hybrids. Org Biomol Chem 2013; 11:8443-51. [DOI: 10.1039/c3ob40532j] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
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50
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Peña S, Scarone L, Manta E, Stewart L, Yardley V, Croft S, Serra G. Synthesis of a Microcystis aeruginosa predicted metabolite with antimalarial activity. Bioorg Med Chem Lett 2012; 22:4994-7. [DOI: 10.1016/j.bmcl.2012.06.028] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2012] [Revised: 06/06/2012] [Accepted: 06/11/2012] [Indexed: 02/07/2023]
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