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Takemori H, Kanzaki C, Nomura S, Maeda T, Numata M. Catalytic effect of microflow space for supramolecular block co-polymerization of water-soluble porphyrins. Chem Commun (Camb) 2024; 60:7303-7306. [PMID: 38904123 DOI: 10.1039/d4cc02003k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/22/2024]
Abstract
Using microflow space, a catalytic effect was achieved for supramolecular polymerization. With increasing reactivity at the polymer end, the selective connection of active monomers formed new block domains, avoiding fast homo-assembly. Binding of less-reactive monomers at the polymer end overcame steric bulkiness, affording a stable supramolecular diblock copolymer (SdiBCP).
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Affiliation(s)
- Haruna Takemori
- Department of Biomolecular Chemistry, Graduate School of Life and Environmental Sciences, Kyoto Prefectural University, Shimogamo, Sakyo-ku, Kyoto 606-8522, Japan.
| | - Chisako Kanzaki
- Department of Biomolecular Chemistry, Graduate School of Life and Environmental Sciences, Kyoto Prefectural University, Shimogamo, Sakyo-ku, Kyoto 606-8522, Japan.
| | - Shota Nomura
- Department of Biomolecular Chemistry, Graduate School of Life and Environmental Sciences, Kyoto Prefectural University, Shimogamo, Sakyo-ku, Kyoto 606-8522, Japan.
| | - Takato Maeda
- Department of Biomolecular Chemistry, Graduate School of Life and Environmental Sciences, Kyoto Prefectural University, Shimogamo, Sakyo-ku, Kyoto 606-8522, Japan.
| | - Munenori Numata
- Department of Biomolecular Chemistry, Graduate School of Life and Environmental Sciences, Kyoto Prefectural University, Shimogamo, Sakyo-ku, Kyoto 606-8522, Japan.
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2
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Das A, Ghosh S, Mishra A, Som A, Banakar VB, Agasti SS, George SJ. Enzymatic Reaction-Coupled, Cooperative Supramolecular Polymerization. J Am Chem Soc 2024; 146:14844-14855. [PMID: 38747446 DOI: 10.1021/jacs.4c03588] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/30/2024]
Abstract
Nature employs sophisticated mechanisms to precisely regulate self-assembly and functions within biological systems, exemplified by the formation of cytoskeletal filaments. Various enzymatic reactions and auxiliary proteins couple with the self-assembly process, meticulously regulating the length and functions of resulting macromolecular structures. In this context, we present a bioinspired, reaction-coupled approach for the controlled supramolecular polymerization in synthetic systems. To achieve this, we employ an enzymatic reaction that interfaces with the adenosine triphosphate (ATP)-templated supramolecular polymerization of naphthalene diimide monomers (NSG). Notably, the enzymatic production of ATP (template) plays a pivotal role in facilitating reaction-controlled, cooperative growth of the NSG monomers. This growth process, in turn, provides positive feedback to the enzymatic production of ATP, creating an ideal reaction-coupled assembly process. The success of this approach is further evident in the living-growth characteristic observed during seeding experiments, marking this method as the pioneering instance where reaction-coupled self-assembly precisely controls the growth kinetics and structural aspects of supramolecular polymers in a predictive manner, akin to biological systems.
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Affiliation(s)
- Angshuman Das
- New Chemistry Unit and School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur, Bangalore 560064, India
| | - Saikat Ghosh
- New Chemistry Unit and School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur, Bangalore 560064, India
| | - Ananya Mishra
- New Chemistry Unit and School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur, Bangalore 560064, India
| | - Arka Som
- New Chemistry Unit and School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur, Bangalore 560064, India
| | - Vijay Basavaraj Banakar
- New Chemistry Unit and School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur, Bangalore 560064, India
| | - Sarit S Agasti
- New Chemistry Unit and School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur, Bangalore 560064, India
| | - Subi J George
- New Chemistry Unit and School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur, Bangalore 560064, India
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3
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van der Tol JB, Vantomme G, Meijer EW. Solvent-Induced Pathway Complexity of Supramolecular Polymerization Unveiled Using the Hansen Solubility Parameters. J Am Chem Soc 2023; 145:17987-17994. [PMID: 37530219 PMCID: PMC10436269 DOI: 10.1021/jacs.3c05547] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2023] [Indexed: 08/03/2023]
Abstract
Supramolecular building blocks assembling into helical aggregates are ubiquitous in the current literature, yet the role of solvents in these supramolecular polymerizations often remains elusive. Here, we present a systematic study that quantifies solvent-supramolecular polymer compatibility using the Hansen solubility parameters (δD, δH, and δP). We first studied the solubility space of the supramolecular building block triazine-1,3,5-tribenzenecarboxamide S-T. Due to its amphiphilic nature, a dual-sphere model based on 58 solvents was applied describing the solubility space of the monomeric state (green sphere) and supramolecular polymer state (blue sphere). To our surprise, further in-depth spectroscopic and morphological studies unveiled a distinct solubility region in-between the two spheres giving rise to the formation of higher-order aggregated structures. This phenomenon occurs due to subtle differences in polarity between the solvent and the side chains and highlights the solvent-induced pathway complexity of supramolecular polymerizations. Subsequent variations in concentration and temperature led to the expansion and contraction of both solubility spheres providing two additional features to tune the monomer and supramolecular polymer solubility. Finally, we applied our dual-sphere model on structurally disparate monomers, such as Zn-porphyrin (S-P) and triphenylamine (S-A), demonstrating the generality of the model and the importance of the supramolecular monomer design in connection with the solvent used. This work unravels the solvent-induced pathway complexity of discotic supramolecular building blocks using a parametrized approach in which interactions between the solvent and solute play a crucial role.
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Affiliation(s)
- Joost
J. B. van der Tol
- Institute
for Complex Molecular Systems and Laboratory of Macromolecular and
Organic Chemistry, Eindhoven University
of Technology, P.O. Box 513, Eindhoven 5600 MB, The Netherlands
| | - Ghislaine Vantomme
- Institute
for Complex Molecular Systems and Laboratory of Macromolecular and
Organic Chemistry, Eindhoven University
of Technology, P.O. Box 513, Eindhoven 5600 MB, The Netherlands
| | - E. W. Meijer
- Institute
for Complex Molecular Systems and Laboratory of Macromolecular and
Organic Chemistry, Eindhoven University
of Technology, P.O. Box 513, Eindhoven 5600 MB, The Netherlands
- School
of Chemistry and RNA Institute The University of New South Wales, Sydney, New South Wales 2052, Australia
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4
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Yamashita K, Numata M. Automated Supramolecular Polymerization in a Microflow: A Versatile Platform for Multistep Supramolecular Reactions. Chempluschem 2023; 88:e202200254. [PMID: 36328773 DOI: 10.1002/cplu.202200254] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2022] [Revised: 10/04/2022] [Indexed: 11/10/2022]
Abstract
This work reports a basic microflow system capable of performing multistep supramolecular polymerization. In this system, injection of the monomer, directional supramolecular copolymerization, removal of the unreacted monomer, and purification of the product supramolecular diblock copolymers are realized along a three-stream flow. When injecting a supramolecular polymer into the central stream of the three-stream flow, the supramolecular polymerization always occurs in the central flow, with the two lateral flows serving as supply and removal lines for the monomer. Employing two kinds of perylene bisimide derivatives as monomers, we confirmed that the reaction occurred selectively at the forward-facing terminus of the supramolecular polymer, along with recovery of the unreacted monomer, ultimately leading to a high-purity supramolecular diblock copolymer. Diblock copolymers are basic units for preparing multicomponent supramolecular block copolymers. Thus, connecting the present system in series would, in principle, result in a "microplant" capable of producing supramolecular polymers having desired inner complexity.
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Affiliation(s)
- Kae Yamashita
- Department of Biomolecular Chemistry, Graduate School of Life and Environmental Sciences, Kyoto Prefectural University Shimogamo, Sakyo-ku, Kyoto, 606-8522, Japan
| | - Munenori Numata
- Department of Biomolecular Chemistry, Graduate School of Life and Environmental Sciences, Kyoto Prefectural University Shimogamo, Sakyo-ku, Kyoto, 606-8522, Japan
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5
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Qiao Q, Liu W, Zhang Y, Chen J, Wang G, Tao Y, Miao L, Jiang W, An K, Xu Z. In Situ Real‐Time Nanoscale Resolution of Structural Evolution and Dynamics of Fluorescent Self‐Assemblies by Super‐Resolution Imaging. Angew Chem Int Ed Engl 2022; 61:e202208678. [DOI: 10.1002/anie.202208678] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2022] [Indexed: 11/06/2022]
Affiliation(s)
- Qinglong Qiao
- CAS Key Laboratory of Separation Science for Analytical Chemistry Dalian Institute of Chemical Physics Chinese Academy of Sciences 457 Zhongshan Road Dalian 116023 China
| | - Wenjuan Liu
- CAS Key Laboratory of Separation Science for Analytical Chemistry Dalian Institute of Chemical Physics Chinese Academy of Sciences 457 Zhongshan Road Dalian 116023 China
- University of Chinese Academy of Sciences Beijing 100049 China
| | - Yinchan Zhang
- CAS Key Laboratory of Separation Science for Analytical Chemistry Dalian Institute of Chemical Physics Chinese Academy of Sciences 457 Zhongshan Road Dalian 116023 China
- University of Chinese Academy of Sciences Beijing 100049 China
| | - Jie Chen
- CAS Key Laboratory of Separation Science for Analytical Chemistry Dalian Institute of Chemical Physics Chinese Academy of Sciences 457 Zhongshan Road Dalian 116023 China
- University of Chinese Academy of Sciences Beijing 100049 China
| | - Guangying Wang
- CAS Key Laboratory of Separation Science for Analytical Chemistry Dalian Institute of Chemical Physics Chinese Academy of Sciences 457 Zhongshan Road Dalian 116023 China
- University of Chinese Academy of Sciences Beijing 100049 China
| | - Yi Tao
- CAS Key Laboratory of Separation Science for Analytical Chemistry Dalian Institute of Chemical Physics Chinese Academy of Sciences 457 Zhongshan Road Dalian 116023 China
- University of Chinese Academy of Sciences Beijing 100049 China
| | - Lu Miao
- CAS Key Laboratory of Separation Science for Analytical Chemistry Dalian Institute of Chemical Physics Chinese Academy of Sciences 457 Zhongshan Road Dalian 116023 China
| | - Wenchao Jiang
- CAS Key Laboratory of Separation Science for Analytical Chemistry Dalian Institute of Chemical Physics Chinese Academy of Sciences 457 Zhongshan Road Dalian 116023 China
- University of Chinese Academy of Sciences Beijing 100049 China
| | - Kai An
- CAS Key Laboratory of Separation Science for Analytical Chemistry Dalian Institute of Chemical Physics Chinese Academy of Sciences 457 Zhongshan Road Dalian 116023 China
- University of Chinese Academy of Sciences Beijing 100049 China
| | - Zhaochao Xu
- CAS Key Laboratory of Separation Science for Analytical Chemistry Dalian Institute of Chemical Physics Chinese Academy of Sciences 457 Zhongshan Road Dalian 116023 China
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6
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Qiao Q, Liu W, Zhang Y, Chen J, Wang G, Tao Y, Miao L, Jiang W, An K, Xu Z. In Situ Real‐time Nanoscale Resolution of Structural Evolution and Dynamics of Fluorescent Self‐assemblies by Super‐Resolution Imaging. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202208678] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Qinglong Qiao
- Dalian Institute of Chemical Physics Department of Biotechnology department of biotechnology CHINA
| | - Wenjuan Liu
- Dalian Institute of Chemical Physics Department of Biotechnology department of biotechnology CHINA
| | - Yinchan Zhang
- Dalian Institute of Chemical Physics Department of Biotechnology department of biotechnology CHINA
| | - Jie Chen
- Dalian Institute of Chemical Physics Department of Biotechnology department of biotechnology CHINA
| | - Guangying Wang
- Dalian Institute of Chemical Physics Department of Biotechnology department of biotechnology CHINA
| | - Yi Tao
- Dalian Institute of Chemical Physics Department of Biotechnology department of biotechnology CHINA
| | - Lu Miao
- Dalian Institute of Chemical Physics Department of Biotechnology department of biotechnology CHINA
| | - Wenchao Jiang
- Dalian Institute of Chemical Physics Department of Biotechnology department of biotechnology CHINA
| | - Kai An
- Dalian Institute of Chemical Physics Department of Biotechnology department of biotechnology CHINA
| | - Zhaochao Xu
- Dalian Institute of Chemical Physics Department of Biotechnology Department of Biological Technology 457 Zhongshan Road 116023 Dalian CHINA
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7
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Laishram R, Sarkar S, Seth I, Khatun N, Aswal VK, Maitra U, George SJ. Secondary Nucleation-Triggered Physical Cross-Links and Tunable Stiffness in Seeded Supramolecular Hydrogels. J Am Chem Soc 2022; 144:11306-11315. [PMID: 35707951 DOI: 10.1021/jacs.2c03230] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Mechanistic understanding and the control of molecular self-assembly at all hierarchical levels remain grand challenges in supramolecular chemistry. Functional realization of dynamic supramolecular materials especially requires programmed assembly at higher levels of molecular organization. Herein, we report an unprecedented molecular control on the fibrous network topology of supramolecular hydrogels and their resulting macroscopic properties by biasing assembly pathways of higher-order structures. The surface-catalyzed secondary nucleation process, a well-known mechanism in amyloid fibrilization and chiral crystallization of small molecules, is introduced as a non-covalent strategy to induce physical cross-links and bundling of supramolecular fibers, which influences the microstructure of gel networks and subsequent mechanical properties of hydrogels. In addition, seed-induced instantaneous gelation is realized in the kinetically controlled self-assembled system under this study, and more importantly, the extent of secondary nucleation events and network topology is manipulated by the concentration of seeds.
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Affiliation(s)
- Raju Laishram
- New Chemistry Unit and School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur, Bangalore 560064, India
| | - Souvik Sarkar
- New Chemistry Unit and School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur, Bangalore 560064, India
| | - Indranil Seth
- Department of Organic Chemistry, Indian Institute of Science (IISc), Bangalore 560012, India
| | - Nurjahan Khatun
- Centre for Nano and Soft Matter Sciences (CeNS), Bangalore 562162, India
| | - Vinod Kumar Aswal
- Solid State Physics Division, Bhabha Atomic Research Centre (BARC), Mumbai 400085, India
| | - Uday Maitra
- Department of Organic Chemistry, Indian Institute of Science (IISc), Bangalore 560012, India
| | - Subi J George
- New Chemistry Unit and School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur, Bangalore 560064, India
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8
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Sarkar S, Sarkar A, Som A, Agasti SS, George SJ. Stereoselective Primary and Secondary Nucleation Events in Multicomponent Seeded Supramolecular Polymerization. J Am Chem Soc 2021; 143:11777-11787. [PMID: 34308651 DOI: 10.1021/jacs.1c05642] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Bioinspired, kinetically controlled seeded growth has been recently shown to provide length, dispersity, and sequence control on the primary structure of dynamic supramolecular polymers. However, command over the molecular organization at all hierarchical levels for the modulation of higher order structures of supramolecular polymers remains a formidable task. In this context, a surface-catalyzed secondary nucleation process, which plays an important role in the autocatalytic generation of amyloid fibrils and also during the chiral crystallization of small monomers, offers exciting possibilities for topology control in synthetic macromolecular systems by introducing secondary growth pathways compared to the usual primary nucleation-elongation process. However, mechanistic insights into the molecular determinants and driving forces for the secondary nucleation event in synthetic systems are not yet realized. Herein, we attempt to fill this dearth by showing an unprecedented molecular chirality control on the primary and secondary nucleation events in seed-induced supramolecular polymerization. Comprehensive kinetic experiments using in situ spectroscopic probing of the temporal changes of the monomer organization during the growth process provide a unique study to characterize the primary and secondary nucleation events in a supramolecular polymerization process. Kinetic analyses along with various microscopic studies further reveal the remarkable effect of stereoselective nucleation and seeding events on the (micro)structural aspects of the resulting multicomponent supramolecular polymers.
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Affiliation(s)
- Souvik Sarkar
- New Chemistry Unit and School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur, Bangalore 560064, India
| | - Aritra Sarkar
- New Chemistry Unit and School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur, Bangalore 560064, India
| | - Arka Som
- New Chemistry Unit and School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur, Bangalore 560064, India
| | - Sarit S Agasti
- New Chemistry Unit and School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur, Bangalore 560064, India
| | - Subi J George
- New Chemistry Unit and School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research (JNCASR), Jakkur, Bangalore 560064, India
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