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For: Fujisawa A, Tamura T, Yasueda Y, Kuwata K, Hamachi I. Chemical Profiling of the Endoplasmic Reticulum Proteome Using Designer Labeling Reagents. J Am Chem Soc 2018;140:17060-17070. [DOI: 10.1021/jacs.8b08606] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Number Cited by Other Article(s)
1
Šlachtová V, Chovanec M, Rahm M, Vrabel M. Bioorthogonal Chemistry in Cellular Organelles. Top Curr Chem (Cham) 2023;382:2. [PMID: 38103067 PMCID: PMC10725395 DOI: 10.1007/s41061-023-00446-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2023] [Accepted: 11/12/2023] [Indexed: 12/17/2023]
2
Ahmad MG, Balamurali MM, Chanda K. Click-derived multifunctional metal complexes for diverse applications. Chem Soc Rev 2023;52:5051-5087. [PMID: 37431583 DOI: 10.1039/d3cs00343d] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/12/2023]
3
Zou X, Shi Y, Zhang S, Quan J, Han J, Han S. Fluorescence-On Imaging of Reticulophagy Enabled by an Acidity-Reporting Solvatochromic Probe. Anal Chem 2023. [PMID: 37463355 DOI: 10.1021/acs.analchem.3c02016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/20/2023]
4
Shi Y, Zou X, Zheng X, Wu Y, Han J, Han S. Sensitive imaging of Endoplasmic reticulum (ER) autophagy with an acidity-reporting ER-Tracker. Autophagy 2023;19:2015-2025. [PMID: 36625032 PMCID: PMC10283422 DOI: 10.1080/15548627.2023.2165759] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2022] [Revised: 12/30/2022] [Accepted: 01/03/2023] [Indexed: 01/11/2023]  Open
5
Miyasato S, Iwata K, Mura R, Nakamura S, Yanagida K, Shindou H, Nagata Y, Kawahara M, Yamaguchi S, Aoki J, Inoue A, Nagamune T, Shimizu T, Nakamura M. Constitutively active GPR43 is crucial for proper leukocyte differentiation. FASEB J 2023;37:e22676. [PMID: 36468834 DOI: 10.1096/fj.202201591r] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2022] [Revised: 11/13/2022] [Accepted: 11/17/2022] [Indexed: 12/12/2022]
6
Tamura T, Hamachi I. Quantitative Analysis of the Endoplasmic Reticulum-Associated Proteins Using ER-Localizable Reactive Molecules. Methods Mol Biol 2023;2603:139-150. [PMID: 36370276 DOI: 10.1007/978-1-0716-2863-8_11] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
7
Fang H, Hu L, Chen Q, Geng S, Qiu K, Wang C, Hao M, Tian Z, Chen H, Liu L, Guan JL, Chen Y, Dong L, Guo Z, He W, Diao J. An ER-targeted "reserve-release" fluorogen for topological quantification of reticulophagy. Biomaterials 2023;292:121929. [PMID: 36455487 DOI: 10.1016/j.biomaterials.2022.121929] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2022] [Revised: 11/09/2022] [Accepted: 11/21/2022] [Indexed: 11/23/2022]
8
Wang H, Wang Z, Gao H, Liu J, Qiao Z, Zhao B, Liang Z, Jiang B, Zhang L, Zhang Y. A photo-oxidation driven proximity labeling strategy enables profiling of mitochondrial proteome dynamics in living cells. Chem Sci 2022;13:11943-11950. [PMID: 36320915 PMCID: PMC9580500 DOI: 10.1039/d2sc04087e] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2022] [Accepted: 09/27/2022] [Indexed: 07/21/2023]  Open
9
Deng Q, Ding K, Li Y, Jiao Y, Hu R, Zhang T, Wang Z, Tang BZ. Referential modification strategy based on phenolic hydroxyl-containing KSA luminogens for ER-targeting probe construction. Biomaterials 2022;289:121767. [PMID: 36099711 DOI: 10.1016/j.biomaterials.2022.121767] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2022] [Revised: 08/18/2022] [Accepted: 08/25/2022] [Indexed: 11/02/2022]
10
Chen X, Zhang Z, Luo W, Zhuang Z, Zhao Z, Wang L, Wang D, Tang BZ. A photoactivatable theranostic probe for simultaneous oxidative stress-triggered multi-color cellular imaging and photodynamic therapy. Biomaterials 2022;287:121680. [PMID: 35872556 DOI: 10.1016/j.biomaterials.2022.121680] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2022] [Revised: 06/28/2022] [Accepted: 07/11/2022] [Indexed: 11/24/2022]
11
Tamura T, Hamachi I. Chemical biology tools for imaging-based analysis of organelle membranes and lipids. Curr Opin Chem Biol 2022;70:102182. [PMID: 35779350 DOI: 10.1016/j.cbpa.2022.102182] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2022] [Revised: 06/01/2022] [Accepted: 06/02/2022] [Indexed: 11/03/2022]
12
Ruan N, Yu X, Li H, Wang Y, Huang C. A HBDI-Based Fluorescent Probe for Labeling Endoplasmic Reticulum in Living Cells. Chem Asian J 2022;17:e202200383. [PMID: 35674678 DOI: 10.1002/asia.202200383] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2022] [Revised: 05/27/2022] [Indexed: 11/10/2022]
13
Singh D, Rajput D, Kanvah S. Fluorescent probes for targeting endoplasmic reticulum: design strategies and their applications. Chem Commun (Camb) 2022;58:2413-2429. [PMID: 35089303 DOI: 10.1039/d1cc06944f] [Citation(s) in RCA: 20] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
14
Singh D, Shewale D, Sengupta A, Soppina V, Kanvah S. Lutidine Derivatives for Live-Cell Imaging of Mitochondria and Endoplasmic Reticulum. Org Biomol Chem 2022;20:7047-7055. [DOI: 10.1039/d2ob00995a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
15
Wang H, Zhang Y, Zeng K, Qiang J, Cao Y, Li Y, Fang Y, Zhang Y, Chen Y. Selective Mitochondrial Protein Labeling Enabled by Biocompatible Photocatalytic Reactions inside Live Cells. JACS AU 2021;1:1066-1075. [PMID: 34467350 PMCID: PMC8395695 DOI: 10.1021/jacsau.1c00172] [Citation(s) in RCA: 30] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2021] [Indexed: 06/01/2023]
16
Interrogating biological systems using visible-light-powered catalysis. Nat Rev Chem 2021;5:322-337. [PMID: 37117838 DOI: 10.1038/s41570-021-00265-6] [Citation(s) in RCA: 42] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 02/24/2021] [Indexed: 12/12/2022]
17
Tamura T, Fujisawa A, Tsuchiya M, Shen Y, Nagao K, Kawano S, Tamura Y, Endo T, Umeda M, Hamachi I. Organelle membrane-specific chemical labeling and dynamic imaging in living cells. Nat Chem Biol 2020;16:1361-1367. [PMID: 32958953 DOI: 10.1038/s41589-020-00651-z] [Citation(s) in RCA: 49] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2019] [Accepted: 08/14/2020] [Indexed: 12/22/2022]
18
Shiraiwa K, Cheng R, Nonaka H, Tamura T, Hamachi I. Chemical Tools for Endogenous Protein Labeling and Profiling. Cell Chem Biol 2020;27:970-985. [DOI: 10.1016/j.chembiol.2020.06.016] [Citation(s) in RCA: 31] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2020] [Revised: 05/29/2020] [Accepted: 06/25/2020] [Indexed: 12/31/2022]
19
Long MJC, Zhao Y, Aye Y. Neighborhood watch: tools for defining locale-dependent subproteomes and their contextual signaling activities. RSC Chem Biol 2020;1:42-55. [PMID: 34458747 PMCID: PMC8341840 DOI: 10.1039/d0cb00041h] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2020] [Accepted: 05/16/2020] [Indexed: 12/21/2022]  Open
20
Fluorescent detection of peroxynitrite during antibody-dependent cellular phagocytosis. Methods Enzymol 2020;640:1-35. [PMID: 32560793 DOI: 10.1016/bs.mie.2020.04.001] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
21
Guo Z, Yan C, Zhu WH. High-Performance Quinoline-Malononitrile Core as a Building Block for the Diversity-Oriented Synthesis of AIEgens. Angew Chem Int Ed Engl 2020;59:9812-9825. [PMID: 31725932 DOI: 10.1002/anie.201913249] [Citation(s) in RCA: 95] [Impact Index Per Article: 23.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2019] [Indexed: 12/20/2022]
22
Guo Z, Yan C, Zhu W. High‐Performance Quinoline‐Malononitrile Core as a Building Block for the Diversity‐Oriented Synthesis of AIEgens. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.201913249] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
23
Bechtel TJ, Li C, Kisty EA, Maurais AJ, Weerapana E. Profiling Cysteine Reactivity and Oxidation in the Endoplasmic Reticulum. ACS Chem Biol 2020;15:543-553. [PMID: 31899610 DOI: 10.1021/acschembio.9b01014] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
24
Tamura T, Takato M, Shiono K, Hamachi I. Development of a Photoactivatable Proximity Labeling Method for the Identification of Nuclear Proteins. CHEM LETT 2020. [DOI: 10.1246/cl.190804] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
25
Zhang MM, Ma YH, Li P, Jia Y, Han KL. Detection of atherosclerosis-related hypochlorous acid produced in foam cells with a localized endoplasmic reticulum probe. Chem Commun (Camb) 2020;56:2610-2613. [DOI: 10.1039/d0cc00090f] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
26
Zhao Y, Li H, Chai Z, Shi W, Li X, Ma H. An endoplasmic reticulum-targeting fluorescent probe for imaging ˙OH in living cells. Chem Commun (Camb) 2020;56:6344-6347. [DOI: 10.1039/d0cc00233j] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
27
Itzhak DN, Sacco F, Nagaraj N, Tyanova S, Mann M, Murgia M. SILAC-based quantitative proteomics using mass spectrometry quantifies endoplasmic reticulum stress in whole HeLa cells. Dis Model Mech 2019;12:dmm.040741. [PMID: 31628211 PMCID: PMC6899043 DOI: 10.1242/dmm.040741] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2019] [Accepted: 10/10/2019] [Indexed: 12/20/2022]  Open
28
Nakamura A, Katahira R, Sawada S, Shinoda E, Kuwata K, Yoshii T, Tsukiji S. Chemogenetic Control of Protein Anchoring to Endomembranes in Living Cells with Lipid-Tethered Small Molecules. Biochemistry 2019;59:205-211. [DOI: 10.1021/acs.biochem.9b00807] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
29
Dong J, Hong D, Lang W, Huang J, Qian L, Zhu Q, Li L, Ge J. Differently Tagged Probes for Protein Profiling of Mitochondria. Chembiochem 2019;20:1155-1160. [PMID: 30600897 DOI: 10.1002/cbic.201800735] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2018] [Indexed: 11/10/2022]
30
Huang J, Hong D, Lang W, Liu J, Dong J, Yuan C, Luo J, Ge J, Zhu Q. Recent advances in reaction-based fluorescent probes for detecting monoamine oxidases in living systems. Analyst 2019;144:3703-3709. [DOI: 10.1039/c9an00409b] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
31
Tamura T, Hamachi I. Chemistry for Covalent Modification of Endogenous/Native Proteins: From Test Tubes to Complex Biological Systems. J Am Chem Soc 2018;141:2782-2799. [DOI: 10.1021/jacs.8b11747] [Citation(s) in RCA: 156] [Impact Index Per Article: 26.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
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