1
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Oang KY, Park S, Moon J, Park E, Lee HK, Sato T, Nozawa S, Adachi SI, Kim J, Kim J, Sohn JH, Ihee H. Extracting Kinetics and Thermodynamics of Molecules without Heavy Atoms via Time-Resolved Solvent Scattering Signals. J Phys Chem Lett 2023; 14:3103-3110. [PMID: 36951437 DOI: 10.1021/acs.jpclett.3c00041] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/18/2023]
Abstract
Time-resolved X-ray liquidography (TRXL) has emerged as a powerful technique for studying the structural dynamics of small molecules and macromolecules in liquid solutions. However, TRXL has limited sensitivity for small molecules containing light atoms only, whose signal has lower contrast compared with the signal from solvent molecules. Here, we present an alternative approach to bypass this limitation by detecting the change in solvent temperature resulting from a photoinduced reaction. Specifically, we analyzed the heat dynamics of TRXL data obtained from p-hydroxyphenacyl diethyl phosphate (HPDP). This analysis enabled us to experimentally determine the number of intermediates and their respective enthalpy changes, which can be compared to theoretical enthalpies to identify the intermediates. This work demonstrates that TRXL can be used to uncover the kinetics and reaction pathways for small molecules without heavy atoms even if the scattering signal from the solute molecules is buried under the strong solvent scattering signal.
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Affiliation(s)
- Key Young Oang
- Radiation Center for Ultrafast Science, Korea Atomic Energy Research Institute (KAERI), Daejeon 34057, Republic of Korea
| | - Sungjun Park
- Department of Chemistry and KI for BioCentury, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, Republic of Korea
- Center for Advanced Reaction Dynamics, Institute for Basic Science (IBS), Daejeon 34141, Republic of Korea
| | - Jiwon Moon
- Department of Chemistry, The Catholic University of Korea, Bucheon 14662, Republic of Korea
| | - Eunji Park
- Department of Chemistry, The Catholic University of Korea, Bucheon 14662, Republic of Korea
| | - Hyun Kyung Lee
- Department of Chemistry, College of Natural Sciences, Chungnam National University, Daejeon 34134, Republic of Korea
| | - Tokushi Sato
- European XFEL, Holzkoppel 4, 22869 Schenefeld, Germany
| | - Shunsuke Nozawa
- Institute of Materials Structure Science, High Energy Accelerator Research Organization, 1-1 Oho, Tsukuba, Ibaraki 305-0801, Japan
| | - Shin-Ichi Adachi
- Institute of Materials Structure Science, High Energy Accelerator Research Organization, 1-1 Oho, Tsukuba, Ibaraki 305-0801, Japan
- Department of Materials Structure Science, School of High Energy Accelerator Science, The Graduate University for Advanced Studies, 1-1 Oho, Tsukuba, Ibaraki 305-0801, Japan
| | - Joonghan Kim
- Department of Chemistry, The Catholic University of Korea, Bucheon 14662, Republic of Korea
| | - Jeongho Kim
- Department of Chemistry, Inha University, 100 Inha-ro, Michuhol-gu, Incheon 22212, Republic of Korea
| | - Jeong-Hun Sohn
- Department of Chemistry, College of Natural Sciences, Chungnam National University, Daejeon 34134, Republic of Korea
| | - Hyotcherl Ihee
- Department of Chemistry and KI for BioCentury, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, Republic of Korea
- Center for Advanced Reaction Dynamics, Institute for Basic Science (IBS), Daejeon 34141, Republic of Korea
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2
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van Wilderen LJGW, Kern-Michler D, Neumann C, Reinfelds M, von Cosel J, Horz M, Burghardt I, Heckel A, Bredenbeck J. Choose your leaving group: selective photodeprotection in a mixture of pHP-caged compounds by VIPER excitation. Chem Sci 2023; 14:2624-2630. [PMID: 36908963 PMCID: PMC9993852 DOI: 10.1039/d2sc06259c] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2022] [Accepted: 02/07/2023] [Indexed: 02/11/2023] Open
Abstract
Photocages are light-triggerable molecular moieties that can locally release a pre-determined leaving group (LG). Finding a suitable photocage for a particular application may be challenging, as the choice may be limited by for instance the optical or physicochemical properties of the system. Using more than one photocage to release different LGs in a reaction mixture may even be more difficult. In this work an experimental strategy is presented that allows us to hand-pick the release of different LGs, and to do so in any order. This is achieved by using isotopologue photocage-LG mixtures in combination with ultrafast VIbrationally Promoted Electronic Resonance (VIPER) excitation. The latter provides the required molecular selectivity simply by tuning the wavenumber of the used IR pulses to the resonance of a specific photocage isotopologue, as is demonstrated here for the para-hydroxyphenacyl (pHP) photocage. For spectroscopic convenience, we use isotopologues of the infrared (IR) spectroscopic marker -SCN as different LGs. Especially for applications where fast LG release is required, pHP is found to be an excellent candidate, as free LG formation is observed to occur with a 10 ps lifetime. The devised strategy may open up new complex uncaging applications, where multiple LGs can be formed locally on a short time scale and in any sequence.
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Affiliation(s)
- Luuk J G W van Wilderen
- Johann Wolfgang Goethe-University, Institute of Biophysics Max-von-Laue-Str. 1 60438 Frankfurt am Main Germany
| | - Daniela Kern-Michler
- Johann Wolfgang Goethe-University, Institute of Biophysics Max-von-Laue-Str. 1 60438 Frankfurt am Main Germany
| | - Carsten Neumann
- Johann Wolfgang Goethe-University, Institute of Biophysics Max-von-Laue-Str. 1 60438 Frankfurt am Main Germany
| | - Matiss Reinfelds
- Johann Wolfgang Goethe-University, Institute of Organic Chemistry and Chemical Biology Max-von-Laue-Str. 7 60438 Frankfurt am Main Germany
| | - Jan von Cosel
- Johann Wolfgang Goethe-University, Institute of Physical and Theoretical Chemistry Max-von-Laue-Str. 7 60438 Frankfurt am Main Germany
| | - Maximiliane Horz
- Johann Wolfgang Goethe-University, Institute of Physical and Theoretical Chemistry Max-von-Laue-Str. 7 60438 Frankfurt am Main Germany
| | - Irene Burghardt
- Johann Wolfgang Goethe-University, Institute of Physical and Theoretical Chemistry Max-von-Laue-Str. 7 60438 Frankfurt am Main Germany
| | - Alexander Heckel
- Johann Wolfgang Goethe-University, Institute of Organic Chemistry and Chemical Biology Max-von-Laue-Str. 7 60438 Frankfurt am Main Germany
| | - Jens Bredenbeck
- Johann Wolfgang Goethe-University, Institute of Biophysics Max-von-Laue-Str. 1 60438 Frankfurt am Main Germany
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3
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Houk AL, Givens RS, Elles CG. Two-Photon Activation of p-Hydroxyphenacyl Phototriggers: Toward Spatially Controlled Release of Diethyl Phosphate and ATP. J Phys Chem B 2016; 120:3178-86. [PMID: 26962676 DOI: 10.1021/acs.jpcb.5b12150] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Two-photon activation of the p-hydroxyphenacyl (pHP) photoactivated protecting group is demonstrated for the first time using visible light at 550 nm from a pulsed laser. Broadband two-photon absorption measurements reveal a strong two-photon transition (>10 GM) near 4.5 eV that closely resembles the lowest-energy band at the same total excitation energy in the one-photon absorption spectrum of the pHP chromophore. The polarization dependence of the two-photon absorption band is consistent with excitation to the same S3 ((1)ππ*) excited state for both one- and two-photon activation. Monitoring the progress of the uncaging reaction under nonresonant excitation at 550 nm confirms a quadratic intensity dependence and that two-photon activation of the uncaging reaction is possible using visible light in the range 500-620 nm. Deprotonation of the pHP chromophore under mildly basic conditions shifts the absorption band to lower energy (3.8 eV) in both the one- and two-photon absorption spectra, suggesting that two-photon activation of the pHP chromophore may be possible using light in the range 550-720 nm. The results of these measurements open the possibility of spatially and temporally selective release of biologically active compounds from the pHP protecting group using visible light from a pulsed laser.
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Affiliation(s)
- Amanda L Houk
- Department of Chemistry, University of Kansas , Lawrence, Kansas 66045, United States
| | - Richard S Givens
- Department of Chemistry, University of Kansas , Lawrence, Kansas 66045, United States
| | - Christopher G Elles
- Department of Chemistry, University of Kansas , Lawrence, Kansas 66045, United States
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4
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Bownik I, Šebej P, Literák J, Heger D, Šimek Z, Givens RS, Klán P. 4-Hydroxyphenacyl Ammonium Salts: A Photoremovable Protecting Group for Amines in Aqueous Solutions. J Org Chem 2015; 80:9713-21. [DOI: 10.1021/acs.joc.5b01770] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
| | | | | | | | | | - Richard S. Givens
- Department
of Chemistry, University of Kansas, 1251 Wescoe Hall Drive, 5010 Malott
Hall, Lawrence, Kansas 66045, United States
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5
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Senadheera SN, Yousef AL, Givens RS. Photorelease of phosphates: Mild methods for protecting phosphate derivatives. Beilstein J Org Chem 2014; 10:2038-54. [PMID: 25246963 PMCID: PMC4168878 DOI: 10.3762/bjoc.10.212] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2014] [Accepted: 08/07/2014] [Indexed: 12/17/2022] Open
Abstract
We have developed a new photoremovable protecting group for caging phosphates in the near UV. Diethyl 2-(4-hydroxy-1-naphthyl)-2-oxoethyl phosphate (14a) quantitatively releases diethyl phosphate upon irradiation in aq MeOH or aq MeCN at 350 nm, with quantum efficiencies ranging from 0.021 to 0.067 depending on the solvent composition. The deprotection reactions originate from the triplet excited state, are robust under ambient conditions and can be carried on to 100% conversion. Similar results were found with diethyl 2-(4-methoxy-1-naphthyl)-2-oxoethyl phosphate (14b), although it was significantly less efficient compared with 14a. A key step in the deprotection reaction in aq MeOH is considered to be a Favorskii rearrangement of the naphthyl ketone motif of 14a,b to naphthylacetate esters 25 and 26. Disruption of the ketone-naphthyl ring conjugation significantly shifts the photoproduct absorption away from the effective incident wavelength for decaging of 14, driving the reaction to completion. The Favorskii rearrangement does not occur in aqueous acetonitrile although diethyl phosphate is released. Other substitution patterns on the naphthyl or quinolin-5-yl core, such as the 2,6-naphthyl 10 or 8-benzyloxyquinolin-5-yl 24 platforms, also do not rearrange by aryl migration upon photolysis and, therefore, do not proceed to completion. The 2,6-naphthyl ketone platform instead remains intact whereas the quinolin-5-yl ketone fragments to a much more complex, highly absorbing reaction mixture that competes for the incident light.
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Affiliation(s)
| | - Abraham L Yousef
- Department of Chemistry, University of Kansas, Lawrence, Kansas 66045, U.S.A
| | - Richard S Givens
- Department of Chemistry, University of Kansas, Lawrence, Kansas 66045, U.S.A
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6
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Senadheera SN, Evans AS, Toscano JP, Givens RS. 2-Diazo-1-(4-hydroxyphenyl)ethanone: a versatile photochemical and synthetic reagent. Photochem Photobiol Sci 2013; 13:324-41. [PMID: 24305682 DOI: 10.1039/c3pp50305d] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
α-Diazo arylketones are well-known substrates for Wolff rearrangement to phenylacetic acids through a ketene intermediate by either thermal or photochemical activation. Likewise, α-substituted p-hydroxyphenacyl (pHP) esters are substrates for photo-Favorskii rearrangements to phenylacetic acids by a different pathway that purportedly involves a cyclopropanone intermediate. In this paper, we show that the photolysis of a series of α-diazo-p-hydroxyacetophenones and p-hydroxyphenacyl (pHP) α-esters both generate the identical rearranged phenylacetates as major products. Since α-diazo-p-hydroxyacetophenone (1a, pHP N2) contains all the necessary functionalities for either Wolff or Favorskii rearrangement, we were prompted to probe this intriguing mechanistic dichotomy under conditions favorable to the photo-Favorskii rearrangement, i.e., photolysis in hydroxylic media. An investigation of the mechanism for conversion of 1a to p-hydroxyphenyl acetic acid (4a) using time-resolved infrared (TRIR) spectroscopy clearly demonstrates the formation of a ketene intermediate that is subsequently trapped by solvent or nucleophiles. The photoreaction of 1a is quenched by oxygen and sensitized by triplet sensitizers and the quantum yields for 1a-c range from 0.19 to a robust 0.25. The lifetime of the triplet, determined by Stern-Volmer quenching, is 31 ns with a rate for appearance of 4a of k = 7.1 × 10(6) s(-1) in aq. acetonitrile (1 : 1 v : v). These studies establish that the primary rearrangement pathway for 1a involves ketene formation in accordance with the photo-Wolff rearrangement. Furthermore we have also demonstrated the synthetic utility of 1a as an esterification and etherification reagent with a variety of substituted α-diazo-p-hydroxyacetophenones, using them as synthons for efficiently coupling it to acids and phenols to produce pHP protect substrates.
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7
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Šolomek T, Heger D, Ngoy BP, Givens RS, Klán P. The Pivotal Role of Oxyallyl Diradicals in Photo-Favorskii Rearrangements: Transient Spectroscopic and Computational Studies. J Am Chem Soc 2013; 135:15209-15. [DOI: 10.1021/ja407588p] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Affiliation(s)
| | | | | | - Richard S. Givens
- Department of Chemistry, University of Kansas, 1251 Wescoe Hall
Drive, 5010 Malott Hall, Lawrence, Kansas 66045, United States
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8
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Chen X, Zhang Q, Xu Y, Fang W, Phillips DL. Water-Assisted Self-Photoredox of 3-(Hydroxymethyl)benzophenone: An Unusual Photochemistry Reaction in Aqueous Solution. J Org Chem 2013; 78:5677-84. [DOI: 10.1021/jo4008783] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Xuebo Chen
- Key Laboratory of Theoretical and Computational Photochemistry of
Ministry of Education, Department of Chemistry, Beijing Normal University, Xin-wai-da-jie No. 19, Beijing 100875,
People’s Republic of China
| | - Qiangqiang Zhang
- Key Laboratory of Theoretical and Computational Photochemistry of
Ministry of Education, Department of Chemistry, Beijing Normal University, Xin-wai-da-jie No. 19, Beijing 100875,
People’s Republic of China
| | - Yanchang Xu
- Key Laboratory of Theoretical and Computational Photochemistry of
Ministry of Education, Department of Chemistry, Beijing Normal University, Xin-wai-da-jie No. 19, Beijing 100875,
People’s Republic of China
| | - Weihai Fang
- Key Laboratory of Theoretical and Computational Photochemistry of
Ministry of Education, Department of Chemistry, Beijing Normal University, Xin-wai-da-jie No. 19, Beijing 100875,
People’s Republic of China
| | - David Lee Phillips
- Department of Chemistry, The University of Hong Kong, Hong Kong, People’s Republic of China
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9
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10
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Givens RS, Rubina M, Stensrud KF. Stereochemically probing the photo-Favorskii rearrangement: a mechanistic investigation. J Org Chem 2013; 78:1709-17. [PMID: 23057737 PMCID: PMC3586294 DOI: 10.1021/jo301640q] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Using model (R)-2-acetyl-2-phenyl acetate esters of (S)- or (R)-α-substituted-p-hydroxybutyrophenones (S,R)-12a and (R,R)-12b, we have shown that a highly efficient photo-Favorskii rearrangement proceeds through a series of intermediates to form racemic rearrangement products. The stereogenic methine on the photoproduct, rac-2-(p-hydroxyphenyl)propanoic acid (rac-9), is formed by closure of a phenoxy-allyloxy intermediate 17 collapsing to a cyclopropanone, the "Favorskii" intermediate 18. These results quantify the intermediacy of a racemized triplet biradical (3)16 on the major rearrangement pathway elusively to the intermediate 18. Thus, intersystem crossing from the triplet biradical surface to the ground state generates a planar zwitterion prior to formation of a Favorskii cyclopropanone that retains no memory of its stereochemical origin. These results parallel the mechanism of Dewar and Bordwell for the ground state formation of cyclopropanone 3 that proceeds through an oxyallyl zwitterionic intermediate. The results are not consistent with the stereospecific S(N)2 ground state Favorskii mechanism observed by Stork, House, and Bernetti. Interconversion of the diastereomeric starting esters of (S,R)-12a and (R,R)-12b during photolysis did not occur, thus ruling out leaving group return prior to rearrangement.
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Affiliation(s)
- Richard S Givens
- Department of Chemistry, The University of Kansas, 1251 Wescoe Hall Drive, 5010 Malott Hall, Lawrence, Kansas 66045, United States.
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11
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Klán P, Šolomek T, Bochet CG, Blanc A, Givens R, Rubina M, Popik V, Kostikov A, Wirz J. Photoremovable protecting groups in chemistry and biology: reaction mechanisms and efficacy. Chem Rev 2013; 113:119-91. [PMID: 23256727 PMCID: PMC3557858 DOI: 10.1021/cr300177k] [Citation(s) in RCA: 1242] [Impact Index Per Article: 112.9] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2012] [Indexed: 02/06/2023]
Affiliation(s)
- Petr Klán
- Department of Chemistry, Faculty of Science, Masaryk University, Kamenice 5, 625 00 Brno, Czech Republic.
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12
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Yang D, Zhang L. Excited-state hydrogen bonding dynamics of pyruvic acid and geminal-diol, 2,2-dihydroxypropanoic acid in aqueous solution: a DFT/TDDFT study. J PHYS ORG CHEM 2013. [DOI: 10.1002/poc.3055] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Dapeng Yang
- Physics Laboratory; North China University of Water Resources and Electric Power; Zhengzhou 450011 China
| | - Lingfeng Zhang
- School of Materials Science and Engineering; Dalian University of Technology; Dalian 116024 China
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13
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Givens RS, Rubina M, Wirz J. Applications of p-hydroxyphenacyl (pHP) and coumarin-4-ylmethyl photoremovable protecting groups. Photochem Photobiol Sci 2012; 11:472-88. [PMID: 22344608 PMCID: PMC3422890 DOI: 10.1039/c2pp05399c] [Citation(s) in RCA: 115] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2011] [Accepted: 01/20/2012] [Indexed: 12/12/2022]
Abstract
Most applications of photoremovable protecting groups have used o-nitrobenzyl compounds and their (often commercially available) derivatives that, however, have several disadvantages. The focus of this review is on applications of the more recently developed title compounds, which are especially well suited for time-resolved biochemical and physiological investigations, because they release the caged substrates in high yield within a few nanoseconds or less. Together, these two chromophores cover the action spectrum for photorelease from >700 nm to 250 nm.
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Affiliation(s)
- Richard S. Givens
- Department of Chemistry, University of Kansas, Kansas, USA; Tel: +1 785 864 3846
| | - Marina Rubina
- Department of Chemistry, University of Kansas, Kansas, USA; Tel: +1 785 864 1574
| | - Jakob Wirz
- Department of Chemistry, Klingelbergstrasse 80, CH-4056 Basel, Switzerland; Tel: +41 76 413 47 48
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14
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Zhang J, Zhao G, Li R, Hou D. Time-Dependent Density Functional Theory Study on the Electronic Excited State of Hydrogen-Bonded Clusters Formed by 2-Hydroxybenzonitrile (o-Cyanophenol) and Carbon Monoxide. J CLUST SCI 2011. [DOI: 10.1007/s10876-011-0406-2] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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15
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Remeš M, Roithová J, Schröder D, Cope ED, Perera C, Senadheera SN, Stensrud K, Ma CC, Givens RS. Gas-phase fragmentation of deprotonated p-hydroxyphenacyl derivatives. J Org Chem 2011; 76:2180-6. [PMID: 21384805 PMCID: PMC3065380 DOI: 10.1021/jo1025223] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Electrospray ionization of methanolic solutions of p-hydroxyphenacyl derivatives HO-C(6)H(4)-C(O)-CH(2)-X (X = leaving group) provides abundant signals for the deprotonated species which are assigned to the corresponding phenolate anions (-)O-C(6)H(4)-C(O)-CH(2)-X. Upon collisional activation in the gas phase, these anions inter alia undergo loss of a neutral "C(8)H(6)O(2)" species concomitant with formation of the corresponding anions X(-). The energies required for the loss of the neutral roughly correlate with the gas phase acidities of the conjugate acids (HX). Extensive theoretical studies performed for X = CF(3)COO in order to reveal the energetically most favorable pathway for the formation of neutral "C(8)H(6)O(2)" suggest three different routes of similar energy demands, involving a spirocyclopropanone, epoxide formation, and a diradical, respectively.
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Affiliation(s)
- Marek Remeš
- Department of Organic Chemistry, Faculty of Sciences, Charles University in Prague, Hlavova 8, 12083 Prague 2, Czech Republic
- Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, Flemingovo náměstí 2, 16610 Prague 6, Czech Republic
| | - Jana Roithová
- Department of Organic Chemistry, Faculty of Sciences, Charles University in Prague, Hlavova 8, 12083 Prague 2, Czech Republic
| | - Detlef Schröder
- Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, Flemingovo náměstí 2, 16610 Prague 6, Czech Republic
| | - Elizabeth D. Cope
- Department of Chemistry, University of Kansas, Lawrence, Kansas 66045, U.S.A
| | - Chamani Perera
- Department of Chemistry, University of Kansas, Lawrence, Kansas 66045, U.S.A
| | | | - Kenneth Stensrud
- Department of Chemistry, University of Kansas, Lawrence, Kansas 66045, U.S.A
| | - Chi-cheng Ma
- Department of Chemistry, University of Kansas, Lawrence, Kansas 66045, U.S.A
| | - Richard S. Givens
- Department of Chemistry, University of Kansas, Lawrence, Kansas 66045, U.S.A
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16
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An HY, Kwok WM, Ma C, Guan X, Kan JTW, Toy PH, Phillips DL. Photophysics and Photodeprotection Reactions of p-Methoxyphenacyl Phototriggers: An Ultrafast and Nanosecond Time-Resolved Spectroscopic and Density Functional Theory Study. J Org Chem 2010; 75:5837-51. [DOI: 10.1021/jo100848b] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Hui-Ying An
- Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong S. A. R., P. R. China
| | - Wai Ming Kwok
- Department of Applied Biology and Chemical Technology, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong S. A. R., P. R. China
| | - Chensheng Ma
- Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong S. A. R., P. R. China
| | - Xiangguo Guan
- Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong S. A. R., P. R. China
| | - Jovi Tze Wai Kan
- Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong S. A. R., P. R. China
| | - Patrick H. Toy
- Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong S. A. R., P. R. China
| | - David Lee Phillips
- Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong S. A. R., P. R. China
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17
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Ma C, Kwok W, An HY, Guan X, Fu M, Toy P, Phillips D. A Time-Resolved Spectroscopic Study of the Bichromophoric Phototrigger 3′,5′-Dimethoxybenzoin Diethyl Phosphate: Interaction Between the Two Chromophores Determines the Reaction Pathway. Chemistry 2010; 16:5102-18. [DOI: 10.1002/chem.200902891] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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18
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Stensrud K, Noh J, Kandler K, Wirz J, Heger D, Givens RS. Competing pathways in the photo-Favorskii rearrangement and release of esters: studies on fluorinated p-hydroxyphenacyl-caged GABA and glutamate phototriggers. J Org Chem 2009; 74:5219-27. [PMID: 19572582 PMCID: PMC3422889 DOI: 10.1021/jo900139h] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Three new trifluoromethylated p-hydroxyphenacyl (pHP)-caged gamma-aminobutyric acid (GABA) and glutamate (Glu) derivatives have been examined for their efficacy as photoremovable protecting groups in aqueous solution. Through the replacement of hydrogen with fluorine, e.g., a m-trifluoromethyl or a m-trifluoromethoxy versus m-methoxy substituents on the pHP chromophore, modest increases in the quantum yields for the release of amino acids GABA and glutamate as well as improved lipophilicity were realized. The pHP triplet undergoes a photo-Favorskii rearrangement with concomitant release of the amino acid substrate. Deprotonation competes with the rearrangement from the triplet excited state and yields the pHP conjugate base that, upon reprotonation, regenerates the starting ketoester, a chemically unproductive or "energy-wasting" process. When picosecond pump-probe spectroscopy is employed, GABA derivatives 2-5 are characterized by short triplet lifetimes, a manifestation of their rapid release of GABA. The bioavailability of released GABA at the GABA(A) receptor improved when the release took place from m-OCF3 (2) but decreased for m-CF3 (3) when compared with the parent pHP derivative. These studies demonstrate that pKa and lipophilicity exert significant but sometimes opposing influences on the photochemistry and biological activity of pHP phototriggers.
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Affiliation(s)
- Kenneth Stensrud
- Department of Chemistry,1251 Wescoe Hall Drive, University of Kansas, Lawrence, KS 66045
| | - Jihyun Noh
- Department of Otolaryngology, 3500 Terrace St., University of Pittsburgh, Pittsburgh, PA 15208
| | - Karl Kandler
- Department of Otolaryngology, 3500 Terrace St., University of Pittsburgh, Pittsburgh, PA 15208
| | - Jakob Wirz
- Departement Chemie, Universität Basel, Klingelbergstrasse 80, CH-4056 Basel, Switzerland
| | - Dominik Heger
- Department of Chemistry, Faculty of Science, Masaryk University, Brno, Czech Republic
| | - Richard S. Givens
- Department of Chemistry,1251 Wescoe Hall Drive, University of Kansas, Lawrence, KS 66045
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Givens RS, Heger D, Hellrung B, Kamdzhilov Y, Mac M, Conrad PG, Cope E, Lee JI, Mata-Segreda JF, Schowen RL, Wirz J. The photo-Favorskii reaction of p-hydroxyphenacyl compounds is initiated by water-assisted, adiabatic extrusion of a triplet biradical. J Am Chem Soc 2008; 130:3307-9. [PMID: 18290649 DOI: 10.1021/ja7109579] [Citation(s) in RCA: 59] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Richard S Givens
- Department of Chemistry, University of Kansas, Lawrence, Kansas 66045, USA.
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Ma C, Du Y, Kwok WM, Phillips DL. Femtosecond Transient Absorption and Nanosecond Time-Resolved Resonance Raman Study of the Solvent-Dependent Photo-Deprotection Reaction of Benzoin Diethyl Phosphate. Chemistry 2007; 13:2290-305. [PMID: 17154320 DOI: 10.1002/chem.200600893] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
A combined femtosecond transient absorption (fs-TA) and nanosecond time-resolved resonance Raman (ns-TR3) study was performed to directly detect the dynamics and elucidate the mechanism of the excited state deactivation and solvent-dependent photo-deprotection pathways for benzoin diethyl phosphate (BDP) in neat acetonitrile (MeCN) and 75 % H2O/25 % MeCN. Comparison of the TA spectral evolution observed in the two solvents provides explicit evidence that the photophysical deactivation of the BDP singlet excited state has little solvent dependence. The TA spectra also indicate the related internal conversion (IC) and intersystem crossing (ISC) processes occur rapidly on hundreds of femtoseconds and approximately 2-3 ps time scales, respectively. From this and in conjunction with a photochemistry study and ground state resonance Raman (RR) measurements, the TA results reveal that the phenacyl localized BDP triplet state (that is mainly npi* nature) is the common and immediate precursor to the photo-deprotection reaction in both solvents. However, the triplet deprotection follows different pathways in neat MeCN versus the largely water containing solvent. The deprotection reaction in MeCN was determined to occur with a approximately 11 ns time constant and the reaction was found to be an unimolecular process leading to elimination of the diethyl phosphoric acid apparently concurrent with cyclization to yield the benzofuran product. In the water mixed solvent, the triplet reaction was observed to proceed with a approximately 15 ns time constant and the reaction leads to not only the deprotection-cyclization but also a heterolytic dissociation to release the diethyl phosphate anion through a branching and competing mechanism. The ns-TR3 spectra combined with relevant DFT calculations have been used to characterize the dynamics, structure and vibrational frequencies to help identify the important intermediates as well as to explore the reaction pathway leading to formation of the solvolysis product in the largely water solvent. A consecutive mechanism has been revealed for the heterolysis-solvolysis reaction in the water mixed solvent. The present work provides direct and irrevocable evidence for the dynamics and mechanistic description of the overall photophysics and deprotection related photochemistry for BDP.
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Affiliation(s)
- Chensheng Ma
- Department of Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong S.A.R., PR China
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Konosonoks A, Wright PJ, Tsao ML, Pika J, Novak K, Mandel SM, Bauer JAK, Bohne C, Gudmundsdóttir AD. Photoenolization of 2-(2-Methyl Benzoyl) Benzoic Acid, Methyl Ester: Effect of E Photoenol Lifetime on the Photochemistry. J Org Chem 2005; 70:2763-70. [PMID: 15787570 DOI: 10.1021/jo048055x] [Citation(s) in RCA: 36] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
[reaction: see text] Photolysis of 3 in argon-saturated 2-propanol led to formation of 5 via intermolecular H-atom abstraction followed by lactonization. Irradiation of 4 in 2-propanol gave compounds 6 and 7 that also come from intermolecular H-atom abstraction. In contrast, photolysis of an oxygen-saturated solution of 3 in 2-propanol yields products 8, 9, and 10, which were all formed from intramolecular H-atom abstraction and trapping of the corresponding biradical with oxygen. Laser flash photolysis of 3 in methanol showed formation of biradical 3BR (lambda(max) 330 nm, and tau = 50 ns) via intramolecular H-atom abstraction as the main photoreactivity of 3. Biradical 3BR decayed into photoenols 3Z and 3E (lambda(max) 390 nm, tau = 6.5 micros and tau = 162 micros, respectively). In comparison, laser flash photolysis of 4 yielded photoenols 4Z and 4E (lambda(max) 390 nm, tau = 15 micros and tau = 3.6 ms, respectively). Thus photoenol 3E is unusually short-lived, and therefore it does not undergo the intramolecular lactonization as we have observed for the analogous photoenol 1E. Photoenol 3Z decays back to 3 via an intramolecular 1,5-H shift, whereas photoenol 3E reforms 3 efficiently via the solvent with the aid of the ortho ester group. The intramolecular lactonization of photoenols 1E and 3E must be a slow process, presumably because the photoenols are rigid and the hydroxyl group is inhibited, by intramolecular hydrogen bonding, from acquiring the correct geometry for lactonization. Thus only photoenols that are resistant to reformation of their ketone via the solvent are long-lived enough to undergo lactonization and release the alcohol moiety.
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