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Glycosyl Formates: Glycosylations with Neighboring-Group Participation. Molecules 2022; 27:molecules27196244. [PMID: 36234778 PMCID: PMC9572138 DOI: 10.3390/molecules27196244] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2022] [Revised: 09/15/2022] [Accepted: 09/19/2022] [Indexed: 11/22/2022] Open
Abstract
Protected 2-O-benzyolated glycosyl formates were synthesized in one-step from the corresponding orthoester using formic acid as the sole reagent. Glucopyranosyl, mannopyranosyl and galactopyranosyl donors were synthesized and their glycosylation properties studied using model glycosyl acceptors of varied steric bulk and reactivity. Bismuth triflate was the preferred catalyst and KPF6 was used as an additive. The 1,2-trans-selectivities resulting from neighboring-group participation were excellent and the glycosylations were generally high-yielding.
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Quantifying lysosomal glycosidase activity within cells using bis-acetal substrates. Nat Chem Biol 2022; 18:332-341. [PMID: 35210619 DOI: 10.1038/s41589-021-00960-x] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2019] [Accepted: 12/10/2021] [Indexed: 12/26/2022]
Abstract
Understanding the function and regulation of enzymes within their physiologically relevant milieu requires quality tools that report on their cellular activities. Here we describe a strategy for glycoside hydrolases that overcomes several limitations in the field, enabling quantitative monitoring of their activities within live cells. We detail the design and synthesis of bright and modularly assembled bis-acetal-based (BAB) fluorescence-quenched substrates, illustrating this strategy for sensitive quantitation of disease-relevant human α-galactosidase and α-N-acetylgalactosaminidase activities. We show that these substrates can be used within live patient cells to precisely measure the engagement of target enzymes by inhibitors and the efficiency of pharmacological chaperones, and highlight the importance of quantifying activity within cells using chemical perturbogens of cellular trafficking and lysosomal homeostasis. These BAB substrates should prove widely useful for interrogating the regulation of glycosidases within cells as well as in facilitating the development of therapeutics and diagnostics for this important class of enzymes.
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Yang L, Hammelev CH, Pedersen CM. Catalytic and Atom-Economic Glycosylation using Glycosyl Formates and Cheap Metal Salts. CHEMSUSCHEM 2020; 13:3166-3171. [PMID: 32267068 DOI: 10.1002/cssc.202000733] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/20/2020] [Revised: 04/07/2020] [Indexed: 06/11/2023]
Abstract
Benzylated glycosyl formates have been synthesized in one step from the corresponding hemiacetal or orthoester with formic acid as the sole reagent. The glycosyl formates are used as glycosyl donors under catalytic conditions with cheap metal catalysts based on iron or bismuth. A 13 C NMR spectroscopic method is developed and evaluated for screening reactions conditions, giving precise information on the selectivity, yield, and byproducts formed. The major side reaction is transesterification, which gives the formylated acceptor and regenerates the hemiacetal. By using this approach, catalyst loadings and solvents are optimized and the scope of the glycosylation is evaluated for a variety of glycosyl donors and acceptors. A proof of concept for a traceless glycosylation, utilizing a dual-purpose iron catalyst that catalyzes both glycosylation and dehydrogenation of formic acid, is also provided.
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Affiliation(s)
- Liang Yang
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, 2100, Copenhagen O, Denmark
| | - Christian H Hammelev
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, 2100, Copenhagen O, Denmark
| | - Christian M Pedersen
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, 2100, Copenhagen O, Denmark
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Liu X, Ren S, Gao Q, Hu C, Li Y, Ding N. Glycosylation of a Ketone with an O-Glycosyl Trichloroacetimidate Provides an Enol Glycoside. Org Lett 2018; 20:5186-5189. [DOI: 10.1021/acs.orglett.8b02126] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Affiliation(s)
- Xianglai Liu
- Key Laboratory of Structure-Based Drug Design and Discovery of Ministry of Education, School of Pharmaceutical Engineering, Shenyang Pharmaceutical University, Shenyang 110016, China
- School of Pharmacy, Fudan University, 826 Zhangheng Road, Shanghai 201203, China
| | - Sumei Ren
- School of Pharmacy, Fudan University, 826 Zhangheng Road, Shanghai 201203, China
| | - Qi Gao
- China State Institute of Pharmaceutical Industry, Shanghai 201203, China
| | - Chun Hu
- Key Laboratory of Structure-Based Drug Design and Discovery of Ministry of Education, School of Pharmaceutical Engineering, Shenyang Pharmaceutical University, Shenyang 110016, China
| | - Yingxia Li
- School of Pharmacy, Fudan University, 826 Zhangheng Road, Shanghai 201203, China
| | - Ning Ding
- School of Pharmacy, Fudan University, 826 Zhangheng Road, Shanghai 201203, China
- Zhangjiang Technology Institute, Fudan University, 825 Zhangheng Road, Shanghai 201203, China
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Gudz GP, Shermolovich YG, Rusanov EB, Ryabitskii AB. Synthesis of fluorinated vinyl O- and S-glycosides and carbohydrate-based vinyl ethers. J Carbohydr Chem 2017. [DOI: 10.1080/07328303.2017.1397681] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- Ganna P. Gudz
- Department of the Chemistry of Sulfurorganic Compounds, National Academy of Sciences of Ukraine, 5, Murmanska st., Kyiv, Ukraine
| | - Yuriy G. Shermolovich
- Department of the Chemistry of Sulfurorganic Compounds, National Academy of Sciences of Ukraine, 5, Murmanska st., Kyiv, Ukraine
| | - Eduard B. Rusanov
- Department of the Chemistry of Sulfurorganic Compounds, National Academy of Sciences of Ukraine, 5, Murmanska st., Kyiv, Ukraine
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Total syntheses of Prelactone V and Prelactone B. Carbohydr Res 2017; 442:17-19. [DOI: 10.1016/j.carres.2017.02.008] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2016] [Revised: 02/20/2017] [Accepted: 02/26/2017] [Indexed: 11/30/2022]
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Moumé-Pymbock M, Crich D. Stereoselective C-glycoside formation with 2-O-benzyl-4,6-O-benzylidene protected 3-deoxy gluco- and mannopyranoside donors: comparison with O-glycoside formation. J Org Chem 2012; 77:8905-12. [PMID: 23009024 PMCID: PMC3501215 DOI: 10.1021/jo3011655] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
Unlike alcohols, the reaction of C-nucleophiles with 2-O-benzyl-4,6-O-benzylidene-protected 3-deoxy-gluco- and mannopyranosyl thioglycosides is highly stereoselective providing the α-C-glycosides in the gluco-series and the β-C-glycosides in the manno-series. Conformational analysis of nucleophilic attack of putative intermediate glycosyl oxocarbenium ions suggests that the observed selectivities for C-glycoside formation can be explained by preferential attack on the opposite face of the oxocarbenium to the C2-H2 bond and that eclipsing interactions with this bond are the main stereodetermining factor. It is argued that the steric interactions in the attack of alcohols (sp(3)-hybridized O) and of typical carbon-based nucleophiles (sp(2) C) on oxocarbenium ions are very different, with the former being less severe, and thus that there is no a priori reason to expect O- and C-glycosylation to exhibit parallel stereoselectivities for attack on a given oxocarbenium ion.
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Affiliation(s)
- Myriame Moumé-Pymbock
- Department of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, MI 48202
| | - David Crich
- Department of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, MI 48202
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Synthesis of partially benzylated arabinofuranosides, NMR analysis, and application to oligosaccharide synthesis. ACTA ACUST UNITED AC 2010. [DOI: 10.1016/j.tetasy.2010.06.033] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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9
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Glycosylated vinyl ethers by the Julia–Lythgoe–Kocienski olefination: application to the synthesis of 2′,5′-dideoxydisaccharides and carbohydrated β-lactams. ACTA ACUST UNITED AC 2009. [DOI: 10.1016/j.tetasy.2009.05.039] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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Pichavant L, Guillermain C, Duchiron S, Coqueret X. Compared Reactivity of Allyl Ribosides in UV-Initiated Free Radical Copolymerization with Acceptor Monomers. Biomacromolecules 2009; 10:400-7. [DOI: 10.1021/bm8011677] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Loic Pichavant
- Université de Reims Champagne Ardenne, Institut de Chimie Moléculaire de Reims CNRS UMR 6229, Moulin de la Housse, BP 1039, 51687 Reims Cedex 2, France
| | - Céline Guillermain
- Université de Reims Champagne Ardenne, Institut de Chimie Moléculaire de Reims CNRS UMR 6229, Moulin de la Housse, BP 1039, 51687 Reims Cedex 2, France
| | - Stéphane Duchiron
- Université de Reims Champagne Ardenne, Institut de Chimie Moléculaire de Reims CNRS UMR 6229, Moulin de la Housse, BP 1039, 51687 Reims Cedex 2, France
| | - Xavier Coqueret
- Université de Reims Champagne Ardenne, Institut de Chimie Moléculaire de Reims CNRS UMR 6229, Moulin de la Housse, BP 1039, 51687 Reims Cedex 2, France
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Thota N, Mukherjee D, Reddy MV, Yousuf SK, Koul S, Taneja SC. Reaction of carbohydrates with Vilsmeier reagent: a tandem selective chloro O-formylation of sugars. Org Biomol Chem 2009; 7:1280-3. [DOI: 10.1039/b900026g] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Yuan J, Frauenrath H. Synthesis and 13C NMR Spectroscopy of Model Compounds for the Microstructure Analysis of Poly(Vinyl Glycoside)s. European J Org Chem 2008. [DOI: 10.1002/ejoc.200800798] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Crich D, Sharma I. Is donor-acceptor hydrogen bonding necessary for 4,6-O-benzylidene-directed beta-mannopyranosylation? Stereoselective synthesis of beta-C-mannopyranosides and alpha-C-glucopyranosides. Org Lett 2008; 10:4731-4. [PMID: 18826233 PMCID: PMC2726931 DOI: 10.1021/ol8017038] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
2,3-Di-O-benzyl-4,6-O-benzylidene-thiohexopyranosides, on activation with 1-benzenesulfinyl piperidine and triflic anhydride, react with allyl silanes and stannanes, and with silyl enolethers to give C-glycosides. In the mannose series the beta-isomers are formed selectively whereas the glucose series provides the alpha-anomers. This selectivity pattern parallels that of O-glycoside formation and eliminates the need to consider donor-acceptor hydrogen bonding in the formation of the O-glycosides.
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Affiliation(s)
- David Crich
- Department of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, Michigan 48202, USA.
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Trofimov BA, Parshina LN, Oparina LA, Tantsyrev AP, Khil'ko M, Vysotskaya OV, Stepanov AV, Gusarova NK, Henkelmann J. Direct vinylation of glucose derivatives with acetylene. Tetrahedron 2007. [DOI: 10.1016/j.tet.2007.08.107] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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