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Valdes-García J, Zamora-Moreno J, Salomón-Flores MK, Martínez-Otero D, Barroso-Flores J, Yatsimirsky AK, Bazany-Rodríguez IJ, Dorazco-González A. Fluorescence Sensing of Monosaccharides by Bis-boronic Acids Derived from Quinolinium Dicarboxamides: Structural and Spectroscopic Studies. J Org Chem 2023; 88:2174-2189. [PMID: 36735858 DOI: 10.1021/acs.joc.2c02590] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
Three new diboronic acid-substituted bisquinolinium salts were synthesized, structurally described by single-crystal X-ray diffraction, and studied in-depth as fluorescent receptors for six monosaccharides and two open-chain polyols in water at physiological pH. The dicationic pyridine-2,6-dicarboxamide-based receptors contain two N-quinolinium rings as the fluorescent units covalently linked to three different isomers of phenylboronic acid (ortho, 2; meta, 3; and para, 4) as chelating binding sites for polyols. Additions of glucose/fructose in the micromolar concentration range to receptors 2 and 3 induce significant fluorescence changes, but in the presence of arabinose, galactose, mannose, and xylose, only modest optical changes are observed. This optical change is attributed to a static photoinduced electron transfer mechanism. The meta-diboronic receptor 3 exhibited a high affinity/selectivity toward glucose (K = 3800 M-1) over other monosaccharides including common interfering species such as fructose and mannitol. Based on multiple spectroscopic tools, electrospray ionization high-resolution mass spectrometry, crystal structures, and density functional theory calculations, the binding mode between 3 and glucose is proposed as a 1:1 complex with the glucofuranose form involving a cooperative chelating diboronate binding. These results demonstrate the usefulness of a new set of cationic fluorescent diboronic acid receptors with a strong ability for optical recognition of glucose in the sub-millimolar concentration range.
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Affiliation(s)
- Josue Valdes-García
- Institute of Chemistry, National Autonomous University of Mexico, Mexico City 04510, Mexico
| | - Julio Zamora-Moreno
- Institute of Chemistry, National Autonomous University of Mexico, Mexico City 04510, Mexico
| | - María K Salomón-Flores
- Institute of Chemistry, National Autonomous University of Mexico, Mexico City 04510, Mexico
| | - Diego Martínez-Otero
- Centro Conjunto de Investigación en Química Sustentable UAEM-UNAM, Instituto de Química, Universidad Nacional Autónoma de México, Toluca 50200, Estado de México, México
| | - Joaquín Barroso-Flores
- Institute of Chemistry, National Autonomous University of Mexico, Mexico City 04510, Mexico.,Centro Conjunto de Investigación en Química Sustentable UAEM-UNAM, Instituto de Química, Universidad Nacional Autónoma de México, Toluca 50200, Estado de México, México
| | - Anatoly K Yatsimirsky
- Facultad de Química, Universidad Nacional Autónoma de México, México D.F. 04510, México
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2
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Picci G, Bazzicalupi C, Coles SJ, Gratteri P, Isaia F, Lippolis V, Montis R, Murgia S, Nocentini A, Orton JB, Caltagirone C. Halogenated isophthalamides and dipicolineamides: the role of the halogen substituents in the anion binding properties. Dalton Trans 2020; 49:9231-9238. [PMID: 32500883 DOI: 10.1039/d0dt01492c] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
A novel family of amide-based receptors is herein described. Specifically, the role of the halogen substituents at the aryl moieties in the anion binding properties of a series of halogenated isophthalamides and dipicolineamides (L1-L6) was investigated both in solution and in the solid state in order to evaluate the incidence of all possible different and combined weak host-guest interactions. Only L5 and L6 bearing pentafluorophenyl rings as substituents have some affinities for the set of anions studied. In particular, in the case of L5 an interesting behaviour with the formation of a non-symmetric adduct with benzoate and dihydrogen phosphate was hypothesised by 1H- and 19F-NMR spectroscopy studies in solution and confirmed by theoretical calculation. The study of the crystal structures of the receptors demonstrated that the steric hindrance determined by the halogen substituents in the receptor molecules influences the accessibility of the anions to the isophthalamide or dipicoline amide NH moieties, thus modulating the affinity for the anion guests.
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Affiliation(s)
- Giacomo Picci
- Dipartimento di Scienze Chimiche e Geologiche, Università degli Studi di Cagliari, S.S. 554 Bivio per Sestu, 09042 Monserrato (CA), Italy.
| | - Carla Bazzicalupi
- Dipartimento di Chimica 'Ugo Schiff', Via della Lastruccia, 3-13 50019 Sesto Fiorentino (FI), Italy
| | - Simon J Coles
- Chemistry University of Southampton, Highfield, Southampton SO17 1BJ, UK
| | - Paola Gratteri
- Department of NEUROFARBA, Section of Pharmaceutical and Nutraceutical Sciences, Laboratory of Molecular Modeling Cheminformatics & QSAR, University of Florence, Polo Scientifico, Via U. Schiff 6, 50019 Sesto Fiorentino, Firenze, Italy
| | - Francesco Isaia
- Dipartimento di Scienze Chimiche e Geologiche, Università degli Studi di Cagliari, S.S. 554 Bivio per Sestu, 09042 Monserrato (CA), Italy.
| | - Vito Lippolis
- Dipartimento di Scienze Chimiche e Geologiche, Università degli Studi di Cagliari, S.S. 554 Bivio per Sestu, 09042 Monserrato (CA), Italy.
| | - Riccardo Montis
- Dipartimento di Scienze Chimiche e Geologiche, Università degli Studi di Cagliari, S.S. 554 Bivio per Sestu, 09042 Monserrato (CA), Italy.
| | - Sergio Murgia
- Dipartimento di Scienze Chimiche e Geologiche, Università degli Studi di Cagliari, S.S. 554 Bivio per Sestu, 09042 Monserrato (CA), Italy.
| | - Alessio Nocentini
- Department of NEUROFARBA, Section of Pharmaceutical and Nutraceutical Sciences, Laboratory of Molecular Modeling Cheminformatics & QSAR, University of Florence, Polo Scientifico, Via U. Schiff 6, 50019 Sesto Fiorentino, Firenze, Italy
| | - James B Orton
- Chemistry University of Southampton, Highfield, Southampton SO17 1BJ, UK
| | - Claudia Caltagirone
- Dipartimento di Scienze Chimiche e Geologiche, Università degli Studi di Cagliari, S.S. 554 Bivio per Sestu, 09042 Monserrato (CA), Italy.
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3
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Ion recognition properties of new pyridine-2,6-dicarboxamide bearing propeller-like pendant residues: multi-spectroscopic approach. MONATSHEFTE FUR CHEMIE 2020. [DOI: 10.1007/s00706-020-02558-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Abstract
Abstract
The synthesis and ion binding properties of new amide derived from propeller-like tris(2-pyridyl)amine and 2,6-pyridinedicarboxylic acid chloride were described. Amide binds divalent metal cations: copper(II), nickel(II), zinc(II), and lead(II) in acetonitrile. In acetonitrile:water mixture (9:1 v/v) amide interacts only with copper(II) and nickel(II) cations forming complexes of 1:1 stoichiometry. It was found that the introduction of bulky, nitrogen donor atom bearing pendant groups can influence coordination mode of pyridine-2,6-dicarboxamides. The probable model of ligand-ion interactions is proposed on the basis of 1H NMR and FT-IR spectroscopy.
Graphic abstract
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5
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Meisel JW, Patel MB, Garrad E, Stanton RA, Gokel GW. Reversal of Tetracycline Resistance in Escherichia coli by Noncytotoxic bis(Tryptophan)s. J Am Chem Soc 2016; 138:10571-7. [DOI: 10.1021/jacs.6b05578] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Joseph W. Meisel
- Center for Nanoscience, Departments of ‡Chemistry & Biochemistry and §Biology, University of Missouri − St. Louis, 1 University Blvd., St. Louis, Missouri 63121, United States
| | - Mohit B. Patel
- Center for Nanoscience, Departments of ‡Chemistry & Biochemistry and §Biology, University of Missouri − St. Louis, 1 University Blvd., St. Louis, Missouri 63121, United States
| | - Evan Garrad
- Center for Nanoscience, Departments of ‡Chemistry & Biochemistry and §Biology, University of Missouri − St. Louis, 1 University Blvd., St. Louis, Missouri 63121, United States
| | - Ryan A. Stanton
- Center for Nanoscience, Departments of ‡Chemistry & Biochemistry and §Biology, University of Missouri − St. Louis, 1 University Blvd., St. Louis, Missouri 63121, United States
| | - George W. Gokel
- Center for Nanoscience, Departments of ‡Chemistry & Biochemistry and §Biology, University of Missouri − St. Louis, 1 University Blvd., St. Louis, Missouri 63121, United States
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6
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Mahapatra AK, Karmakar P, Roy J, Manna S, Maiti K, Sahoo P, Mandal D. Colorimetric and ratiometric fluorescent chemosensor for fluoride ions based on phenanthroimidazole (PI): spectroscopic, NMR and density functional studies. RSC Adv 2015. [DOI: 10.1039/c5ra05327g] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Phenanthro-imidazole conjugate of biscarbanohyrazone, probe PI was designed, synthesized and characterized for selective detection of fluoride ion.
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Affiliation(s)
- Ajit Kumar Mahapatra
- Department of Chemistry
- Indian Institute of Engineering Science and Technology
- Howrah-711103
- India
| | - Parthasarathi Karmakar
- Department of Chemistry
- Indian Institute of Engineering Science and Technology
- Howrah-711103
- India
| | - Jagannath Roy
- Department of Chemistry
- Indian Institute of Engineering Science and Technology
- Howrah-711103
- India
| | - Srimanta Manna
- Department of Chemistry
- Indian Institute of Engineering Science and Technology
- Howrah-711103
- India
| | - Kalipada Maiti
- Department of Chemistry
- Indian Institute of Engineering Science and Technology
- Howrah-711103
- India
| | | | - Debasish Mandal
- Institute of Chemistry
- The Hebrew University of Jerusalem
- 91904 Jerusalem
- Israel
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7
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Van Rossom W, Terentyeva TG, Sodeyama K, Matsushita Y, Tateyama Y, Ariga K, Hill JP. Arylpyrrole oligomers as tunable anion receptors. Org Biomol Chem 2014; 12:5492-9. [DOI: 10.1039/c4ob00357h] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A novel class of oligomeric arylpyrrole receptors has been designed, prepared and analysed for their affinity towards anionic guests.
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Affiliation(s)
- Wim Van Rossom
- World Premier International (WPI)
- Research Center for Materials Nanoarchitectonics (MANA)
- National Institute for Materials Science (NIMS)
- Tsukuba, Japan
| | - Tatyana G. Terentyeva
- World Premier International (WPI)
- Research Center for Materials Nanoarchitectonics (MANA)
- National Institute for Materials Science (NIMS)
- Tsukuba, Japan
| | - Keitaro Sodeyama
- World Premier International (WPI)
- Research Center for Materials Nanoarchitectonics (MANA)
- National Institute for Materials Science (NIMS)
- Tsukuba, Japan
| | - Yoshitaka Matsushita
- World Premier International (WPI)
- Research Center for Materials Nanoarchitectonics (MANA)
- National Institute for Materials Science (NIMS)
- Tsukuba, Japan
| | - Yoshitaka Tateyama
- World Premier International (WPI)
- Research Center for Materials Nanoarchitectonics (MANA)
- National Institute for Materials Science (NIMS)
- Tsukuba, Japan
| | - Katsuhiko Ariga
- World Premier International (WPI)
- Research Center for Materials Nanoarchitectonics (MANA)
- National Institute for Materials Science (NIMS)
- Tsukuba, Japan
| | - Jonathan P. Hill
- World Premier International (WPI)
- Research Center for Materials Nanoarchitectonics (MANA)
- National Institute for Materials Science (NIMS)
- Tsukuba, Japan
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8
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Santos-Figueroa LE, Moragues ME, Climent E, Agostini A, Martínez-Máñez R, Sancenón F. Chromogenic and fluorogenic chemosensors and reagents for anions. A comprehensive review of the years 2010-2011. Chem Soc Rev 2013; 42:3489-613. [PMID: 23400370 DOI: 10.1039/c3cs35429f] [Citation(s) in RCA: 361] [Impact Index Per Article: 32.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
This review focuses on examples reported in the years 2010-2011 dealing with the design of chromogenic and fluorogenic chemosensors or reagents for anions.
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Affiliation(s)
- Luis E Santos-Figueroa
- Centro Interuniversitario de Reconocimiento Molecular y Desarrollo Tecnológico, (IDM), Unidad Mixta Universidad Politécnica de Valencia - Universitat de València, Spain
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9
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10
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Atkins JL, Patel MB, Daschbach MM, Meisel JW, Gokel GW. Anion complexation and transport by isophthalamide and dipicolinamide derivatives: DNA plasmid transformation in E. coli. J Am Chem Soc 2012; 134:13546-9. [PMID: 22862681 DOI: 10.1021/ja304816e] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Tris-arenes based on either isophthalic acid or 2,6-dipicolinic acid have been known for more than a decade to bind anions. Recent studies have also demonstrated their ability to transport various ions through membranes. In this report, we demonstrate two important properties of these simple diamides. First, they transport plasmid DNA into Escherichia coli about 2-fold over controls, where the ampicillin resistance gene is expressed in the bacteria. These studies were done with plasmid DNA (~2.6 kilobase (kb)) in JM109 E. coli cells. Second, known methods do not typically transport large plasmids (>15 kb). We demonstrate here that transformation of large pVIB plasmids (i.e., >20 kb) were enhanced over water controls by ~10-fold. These results are in striking contrast to the normal decrease in transformation with increasing plasmid size.
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Affiliation(s)
- Jason L Atkins
- Department of Chemistry & Biochemistry, and Center for Nanoscience, University of Missouri-St. Louis, St. Louis, Missouri 63121, USA
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11
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Affiliation(s)
- Ewa Wagner-Wysiecka
- a Department of Chemical Technology , Chemical Faculty, Gdansk University of Technology , Narutowicza11/12, 80-233 , Gdansk , Poland
| | - Jarosław Chojnacki
- b Department of Inorganic Chemistry , Chemical Faculty, Gdansk University of Technology , Narutowicza11/12, 80-233 , Gdansk , Poland
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12
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Van Rossom W, Caers J, Robeyns K, Van Meervelt L, Maes W, Dehaen W. (Thio)ureido Anion Receptors Based on a 1,3-Alternate Oxacalix[2]arene[2]pyrimidine Scaffold. J Org Chem 2012; 77:2791-7. [DOI: 10.1021/jo300004p] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Wim Van Rossom
- Molecular
Design and Synthesis,
Department of Chemistry, Katholieke Universiteit Leuven (KU Leuven), Celestijnenlaan 200F, 3001 Leuven, Belgium
| | - Jef Caers
- Molecular
Design and Synthesis,
Department of Chemistry, Katholieke Universiteit Leuven (KU Leuven), Celestijnenlaan 200F, 3001 Leuven, Belgium
| | - Koen Robeyns
- Biomolecular Architecture, Department
of Chemistry, Katholieke Universiteit Leuven (KU Leuven), Celestijnenlaan 200F, 3001 Leuven, Belgium
- Institute of Condensed Matter
and Nanosciences (IMCN), Université Catholique de Louvain (UCL), Bâtiment Lavoisier, place Louis
Pasteur 1, bte 3, 1348 Louvain-la-Neuve, Belgium
| | - Luc Van Meervelt
- Biomolecular Architecture, Department
of Chemistry, Katholieke Universiteit Leuven (KU Leuven), Celestijnenlaan 200F, 3001 Leuven, Belgium
| | - Wouter Maes
- Molecular
Design and Synthesis,
Department of Chemistry, Katholieke Universiteit Leuven (KU Leuven), Celestijnenlaan 200F, 3001 Leuven, Belgium
- Design & Synthesis of Organic Semiconductors (DSOS), Institute for Materials Research (IMO-IMOMEC), Hasselt University, Agoralaan 1 − Building D, 3590 Diepenbeek, Belgium
| | - Wim Dehaen
- Molecular
Design and Synthesis,
Department of Chemistry, Katholieke Universiteit Leuven (KU Leuven), Celestijnenlaan 200F, 3001 Leuven, Belgium
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13
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Liu XM, Zhao Q, Song WC, Bu XH. New Highly Selective Colorimetric and Ratiometric Anion Receptor for Detecting Fluoride Ions. Chemistry 2012; 18:2806-11. [DOI: 10.1002/chem.201102725] [Citation(s) in RCA: 52] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2011] [Revised: 11/07/2011] [Indexed: 11/11/2022]
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14
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Li JQ, Wei TB, Lin Q, Li P, Zhang YM. Mercapto thiadiazole-based sensor with colorimetric specific selectivity for AcO- in aqueous solution. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2011; 83:187-193. [PMID: 21903458 DOI: 10.1016/j.saa.2011.08.015] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2011] [Revised: 08/01/2011] [Accepted: 08/10/2011] [Indexed: 05/31/2023]
Abstract
A novel acetate selective anion sensor 3 based on azophenol and mercapto thiadiazole had been designed and synthesized. Sensor 3 behaves a single selectivity and sensitivity in the recognition for AcO(-) anion over other anions such as F(-), Cl(-), Br(-), I(-), H(2)PO(4)(-), HSO(4)(-) and ClO(4)(-) by naked-eyes and UV-vis spectra changes in aqueous solution (H(2)O/DMSO, 5:5, v/v). The color of the solution containing sensor 3 had an obvious change from colorless to orange only after the addition of AcO(-) in aqueous solution while other anions did not cause obvious color change. (1)H NMR titration results revealed that the binding process includes two steps: (i) hydrogen bonding interactions (for small quantities of acetate) and (ii) proton transfer between the sensor 3 and the coordinated anion (for high quantities of acetate). The association constant K(a) was 7.35×10(3) M(-1). The detection limitation of AcO(-) with the sensor 3 was 1.0×10(-6) mol L(-1).
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Affiliation(s)
- Jun-Qiang Li
- Key Laboratory of Eco-Environment-Related Polymer Materials, Ministry of Education of China, College of Chemistry and Chemical Engineering, Northwest Normal University, Lanzhou, Gansu, PR China
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15
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Mahapatra AK, Manna SK, Sahoo P. Color response of tri-armed azo host colorimetric sensors and test kit for fluoride. Talanta 2011; 85:2673-80. [DOI: 10.1016/j.talanta.2011.08.040] [Citation(s) in RCA: 63] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2011] [Revised: 08/21/2011] [Accepted: 08/22/2011] [Indexed: 10/17/2022]
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16
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Amendola V, Fabbrizzi L, Mosca L, Schmidtchen FP. Urea-, Squaramide-, and Sulfonamide-Based Anion Receptors: A Thermodynamic Study. Chemistry 2011; 17:5972-81. [DOI: 10.1002/chem.201003411] [Citation(s) in RCA: 84] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2010] [Indexed: 11/09/2022]
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