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Agrahari AK, Kumar S, Pandey MD, Rajkhowa S, Jaiswal MK, Tiwari VK. Click Chemistry ‐ Inspired Synthesis of Porphyrin Hybrid Glycodendrimers as Fluorescent Sensor for Cu(II) Ions. ChemistrySelect 2022. [DOI: 10.1002/slct.202202273] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Affiliation(s)
- Anand K. Agrahari
- Department of Chemistry Institute of Science Banaras Hindu University Varanasi UP-221005 INDIA
- Department of Chemistry University of California-Davis Davis CA 95616 U.S.A
| | - Sunil Kumar
- Department of Chemistry Institute of Science Banaras Hindu University Varanasi UP-221005 INDIA
| | - Mrituanjay D. Pandey
- Department of Chemistry Institute of Science Banaras Hindu University Varanasi UP-221005 INDIA
| | - Sanchayita Rajkhowa
- Department of Chemistry The Assam Royal Global University Guwahati Assam 781035 INDIA
| | - Manoj K. Jaiswal
- Department of Chemistry Institute of Science Banaras Hindu University Varanasi UP-221005 INDIA
| | - Vinod K. Tiwari
- Department of Chemistry Institute of Science Banaras Hindu University Varanasi UP-221005 INDIA
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2
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Kumar K, Agrahari AK, Pratap R, Tiwari VK, Bhattacharya S. Synthesis and structural features of a series of Cu( i) furan-2-thiocarboxylate complexes: efficient “click” catalysts for the synthesis of glycoconjugates and glycocluster. NEW J CHEM 2022. [DOI: 10.1039/d2nj03433f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A series of phosphinecopper(i) thiocarboxylates have been synthesized and characterized structurally. These complexes act as efficient catalysts for the 'click' azide–alkyne cycloaddition leading to glycoconjugates and a glycocluster.
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Affiliation(s)
- Krishna Kumar
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi-221005, India
| | - Anand K. Agrahari
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi-221005, India
| | - Rajesh Pratap
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi-221005, India
| | - Vinod K. Tiwari
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi-221005, India
| | - Subrato Bhattacharya
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi-221005, India
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3
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Dinuclear Copper(I) Thiodiacetate Complex-Mediated Expeditious Synthesis of the Chlorine-Containing Cyclen-Cored 36-Glucose-Coated Glycodendrimer. J CHEM-NY 2021. [DOI: 10.1155/2021/4209514] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
High-sugar-tethered glycodendrimers are a remarkable tool in glycobiology for the investigation of carbohydrate-protein interaction using its multivalency property. An enthralling double-stage convergent synthetic approach was selected to build a novel class of chlorine-containing glucose-coated dendrimers using an efficient click catalyst ‘dinuclear copper(I) thiodiacetate complex.’ In this context, cyclen core was developed through a divergent approach, while the glucodendron was developed via a convergent approach independently. Both azide-alkyne partners were coupled through a modular copper azide-alkyne cycloaddition (CuAAC) strategy to afford a high yield of the desired 36-glucose-coated glycodendrimer. The synthesized glycodendrimer has been elucidated by NMR, gel permeation chromatography (GPC), and IR spectral analysis.
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Agrahari AK, Jaiswal MK, Yadav MS, Tiwari VK. CuAAC mediated synthesis of cyclen cored glycodendrimers of high sugar tethers at low generation. Carbohydr Res 2021; 508:108403. [PMID: 34329845 DOI: 10.1016/j.carres.2021.108403] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2021] [Revised: 07/12/2021] [Accepted: 07/19/2021] [Indexed: 02/08/2023]
Abstract
Glycodendrimers are receiving considerable attention to mimic a number of imperative features of cell surface glycoconjugate and acquired excellent relevance to a wide domain of investigations including medicine, pharmaceutics, catalysis, nanotechnology, carbohydrate-protein interaction, and moreover in drug delivery systems. Toward this end, an expeditious, modular, and regioselective triazole-forming CuAAC click approach along with double stage convergent synthetic method was chosen to develop a variety of novel chlorine-containing cyclen cored glycodendrimers of high sugar tethers at low generation of promising therapeutic potential. We developed a novel chlorine-containing hypercore unit with 12 alkynyl functionality originated from cyclen scaffold which was confirmed by its single crystal X-ray data analysis. Further, the modular CuAAC technique was utilized to produce a variety of novel 12-sugar coated (G0) glycodendrimers 12-15 adorn with β-Glc-, β-Man-, β-Gal-, β-Lac, along with 36-galactose coated (G1) glycodendrimer 18 in good-to-high yield. The structures of the developed glycodendrimer architectures have been well elucidated by extensive spectral analysis including NMR (1H & 13CNMR), HRMS, MALDI-TOF MS, UV-Vis, IR, and SEC (Size Exclusion Chromatogram) data.
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Affiliation(s)
- Anand K Agrahari
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, 221005, India
| | - Manoj K Jaiswal
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, 221005, India
| | - Mangal S Yadav
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, 221005, India
| | - Vinod K Tiwari
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, 221005, India.
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5
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Agrahari AK, Bose P, Jaiswal MK, Rajkhowa S, Singh AS, Hotha S, Mishra N, Tiwari VK. Cu(I)-Catalyzed Click Chemistry in Glycoscience and Their Diverse Applications. Chem Rev 2021; 121:7638-7956. [PMID: 34165284 DOI: 10.1021/acs.chemrev.0c00920] [Citation(s) in RCA: 159] [Impact Index Per Article: 53.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
Copper(I)-catalyzed 1,3-dipolar cycloaddition between organic azides and terminal alkynes, commonly known as CuAAC or click chemistry, has been identified as one of the most successful, versatile, reliable, and modular strategies for the rapid and regioselective construction of 1,4-disubstituted 1,2,3-triazoles as diversely functionalized molecules. Carbohydrates, an integral part of living cells, have several fascinating features, including their structural diversity, biocompatibility, bioavailability, hydrophilicity, and superior ADME properties with minimal toxicity, which support increased demand to explore them as versatile scaffolds for easy access to diverse glycohybrids and well-defined glycoconjugates for complete chemical, biochemical, and pharmacological investigations. This review highlights the successful development of CuAAC or click chemistry in emerging areas of glycoscience, including the synthesis of triazole appended carbohydrate-containing molecular architectures (mainly glycohybrids, glycoconjugates, glycopolymers, glycopeptides, glycoproteins, glycolipids, glycoclusters, and glycodendrimers through regioselective triazole forming modular and bio-orthogonal coupling protocols). It discusses the widespread applications of these glycoproducts as enzyme inhibitors in drug discovery and development, sensing, gelation, chelation, glycosylation, and catalysis. This review also covers the impact of click chemistry and provides future perspectives on its role in various emerging disciplines of science and technology.
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Affiliation(s)
- Anand K Agrahari
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh 221005, India
| | - Priyanka Bose
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh 221005, India
| | - Manoj K Jaiswal
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh 221005, India
| | - Sanchayita Rajkhowa
- Department of Chemistry, Jorhat Institute of Science and Technology (JIST), Jorhat, Assam 785010, India
| | - Anoop S Singh
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh 221005, India
| | - Srinivas Hotha
- Department of Chemistry, Indian Institute of Science and Engineering Research (IISER), Pune, Maharashtra 411021, India
| | - Nidhi Mishra
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh 221005, India
| | - Vinod K Tiwari
- Department of Chemistry, Institute of Science, Banaras Hindu University, Varanasi, Uttar Pradesh 221005, India
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6
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Hoyos P, Perona A, Juanes O, Rumbero Á, Hernáiz MJ. Synthesis of Glycodendrimers with Antiviral and Antibacterial Activity. Chemistry 2021; 27:7593-7624. [PMID: 33533096 DOI: 10.1002/chem.202005065] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2020] [Indexed: 12/27/2022]
Abstract
Glycodendrimers are an important class of synthetic macromolecules that can be used to mimic many structural and functional features of cell-surface glycoconjugates. Their carbohydrate moieties perform key important functions in bacterial and viral infections, often regulated by carbohydrate-protein interactions. Several studies have shown that the molecular structure, valency and spatial organisation of carbohydrate epitopes in glycoconjugates are key factors in the specificity and avidity of carbohydrate-protein interactions. Choosing the right glycodendrimers almost always helps to interfere with such interactions and blocks bacterial or viral adhesion and entry into host cells as an effective strategy to inhibit bacterial or viral infections. Herein, the state of the art in the design and synthesis of glycodendrimers employed for the development of anti-adhesion therapy against bacterial and viral infections is described.
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Affiliation(s)
- Pilar Hoyos
- Chemistry in Pharmaceutical Sciences Department, Complutense University of Madrid, Plaza Ramón y Cajal s/n, 28040, Madrid, Spain
| | - Almudena Perona
- Chemistry in Pharmaceutical Sciences Department, Complutense University of Madrid, Plaza Ramón y Cajal s/n, 28040, Madrid, Spain
| | - Olga Juanes
- Organic Chemistry Department, Autónoma University of Madrid, Francisco Tomás y Valiente 7, 28049, Madrid, Spain
| | - Ángel Rumbero
- Organic Chemistry Department, Autónoma University of Madrid, Francisco Tomás y Valiente 7, 28049, Madrid, Spain
| | - María J Hernáiz
- Chemistry in Pharmaceutical Sciences Department, Complutense University of Madrid, Plaza Ramón y Cajal s/n, 28040, Madrid, Spain
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Agrahari AK, Singh AS, Mukherjee R, Tiwari VK. An expeditious click approach towards the synthesis of galactose coated novel glyco-dendrimers and dentromers utilizing a double stage convergent method. RSC Adv 2020; 10:31553-31562. [PMID: 35520637 PMCID: PMC9056565 DOI: 10.1039/d0ra05289b] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2020] [Accepted: 08/10/2020] [Indexed: 11/29/2022] Open
Abstract
The primary motive behind this article is to bring to the forefront a unique kind of dendrimer which has remained a dark horse since its discovery, namely dentromer. We herein report the synthesis of glycodendrimers and glycodentromers crowned with galactose units by harnessing an expeditious synthesis of dendrimer core 18 and dentromer core 19, divergently with branching directionality (1 → 2) and (1 → 3), respectively. A competent, double stage convergent synthetic path was chosen to facilitate ease of refining and spectroscopic elucidations. By exploiting a Cu(i)-catalyzed azide-alkyne cycloaddition (CuAAC) reaction strategy, we successfully developed a new series of galactosylated dendrimers 20, 21, 22, and 24 containing 6, 12, 18, and 18 peripheral galactose units, respectively. We are first to report the practical synthesis of 9-peripheral galactose coated glycodentromer 23 (0th generation) and 27-peripheral galactose coated glycodentromer 25 (1st generation). These synthesized scaffolds were characterized by spectral studies such as 1H, 13C NMR, FT-IR, MALDI-TOF MS, HRMS and SEC analysis. Additionally, gel permeation chromatography depicted the regular progression in size from 6 to 27-peripheral galactose coated glycodendrimers along with glycodentromers, with their high monodispersity. Also, the glyco-dendrimers and dentromers synthesized from two different hypercore units i.e. dendrimers core (18) and dentromer core (19), have been supported by their UV-visible absorbance and emission spectroscopy.
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Affiliation(s)
- Anand K Agrahari
- Department of Chemistry, Centre of Advanced Study, Institute of Science, Banaras Hindu University Varanasi-221005 India
| | - Anoop S Singh
- Department of Chemistry, Centre of Advanced Study, Institute of Science, Banaras Hindu University Varanasi-221005 India
| | - Rishav Mukherjee
- Department of Chemistry, Centre of Advanced Study, Institute of Science, Banaras Hindu University Varanasi-221005 India
| | - Vinod K Tiwari
- Department of Chemistry, Centre of Advanced Study, Institute of Science, Banaras Hindu University Varanasi-221005 India
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8
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Wagen CC, Ingoglia BT, Buchwald SL. Unexpected Formation of Hexasubstituted Arenes through a 2-fold Palladium-Mediated Ligand Arylation. J Org Chem 2019; 84:12672-12679. [PMID: 31512875 DOI: 10.1021/acs.joc.9b02091] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A rearrangement reaction of biarylphosphine-supported Pd(II) complexes was employed to synthesize 1,3,5-triaryl 2,4,6-triisopropylbenzene compounds, a class of molecules that has not previously been reported. The strain of the central hexasubstituted ring was investigated via X-ray crystallography.
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Affiliation(s)
- Corin C Wagen
- Department of Chemistry , Massachusetts Institute of Technology , Cambridge , Massachusetts 02139 , United States
| | - Bryan T Ingoglia
- Department of Chemistry , Massachusetts Institute of Technology , Cambridge , Massachusetts 02139 , United States
| | - Stephen L Buchwald
- Department of Chemistry , Massachusetts Institute of Technology , Cambridge , Massachusetts 02139 , United States
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9
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Li J, Qian Y, Duan W, Zeng Q. Advances in the study of the host-guest interaction by using coronene as the guest molecule. CHINESE CHEM LETT 2019. [DOI: 10.1016/j.cclet.2018.05.037] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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10
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Agrahari AK, Singh AS, Singh AK, Mishra N, Singh M, Prakash P, Tiwari VK. Click inspired synthesis of hexa and octadecavalent peripheral galactosylated glycodendrimers and their possible therapeutic applications. NEW J CHEM 2019. [DOI: 10.1039/c9nj02564b] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Click inspired glycodendrimers comprising a rigid hexapropargyloxy benzene core with peripheral β-d-galactopyranosidic units were developed and evaluated for their therapeutic potential.
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Affiliation(s)
- Anand K. Agrahari
- Department of Chemistry
- Institute of Science
- Banaras Hindu University
- Varanasi-221005
- India
| | - Anoop S. Singh
- Department of Chemistry
- Institute of Science
- Banaras Hindu University
- Varanasi-221005
- India
| | - Ashish Kumar Singh
- Department of Microbiology
- Institute of Medical Sciences
- Banaras Hindu University
- Varanasi-221005
- India
| | - Nidhi Mishra
- Department of Chemistry
- Institute of Science
- Banaras Hindu University
- Varanasi-221005
- India
| | - Mala Singh
- Department of Chemistry
- Institute of Science
- Banaras Hindu University
- Varanasi-221005
- India
| | - Pradyot Prakash
- Department of Microbiology
- Institute of Medical Sciences
- Banaras Hindu University
- Varanasi-221005
- India
| | - Vinod K. Tiwari
- Department of Chemistry
- Institute of Science
- Banaras Hindu University
- Varanasi-221005
- India
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11
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Mekala S, Peters KC, Singer KD, Gross RA. Biosurfactant-functionalized porphyrin chromophore that forms J-aggregates. Org Biomol Chem 2018; 16:7178-7190. [DOI: 10.1039/c8ob01655k] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Synthesis of sophorolipid-porphyrin conjugates with built-in variations in non-covalent interactions, H–bonding, π–π stacking, and hydrophobic interactions for supramolecular self-assembly.
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Affiliation(s)
- Shekar Mekala
- Center for Biotechnology and Interdisciplinary Studies (CBIS) and New York State Center for Polymer Synthesis
- Rensselaer Polytechnic Institute
- Troy
- USA
| | - Kyle C. Peters
- Department of Physics
- Case Western Reserve University
- Cleveland
- USA
| | | | - Richard A. Gross
- Center for Biotechnology and Interdisciplinary Studies (CBIS) and New York State Center for Polymer Synthesis
- Rensselaer Polytechnic Institute
- Troy
- USA
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12
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Vij V, Bhalla V, Kumar M. Hexaarylbenzene: Evolution of Properties and Applications of Multitalented Scaffold. Chem Rev 2016; 116:9565-627. [DOI: 10.1021/acs.chemrev.6b00144] [Citation(s) in RCA: 91] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Affiliation(s)
- Varun Vij
- Department of Chemistry,
UGC Centre for Advanced Studies, Guru Nanak Dev University, Amritsar, Punjab 143005, India
| | - Vandana Bhalla
- Department of Chemistry,
UGC Centre for Advanced Studies, Guru Nanak Dev University, Amritsar, Punjab 143005, India
| | - Manoj Kumar
- Department of Chemistry,
UGC Centre for Advanced Studies, Guru Nanak Dev University, Amritsar, Punjab 143005, India
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13
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Multivalent Carbohydrate-Lectin Interactions: How Synthetic Chemistry Enables Insights into Nanometric Recognition. Molecules 2016; 21:molecules21050629. [PMID: 27187342 PMCID: PMC6274006 DOI: 10.3390/molecules21050629] [Citation(s) in RCA: 48] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2016] [Revised: 05/02/2016] [Accepted: 05/10/2016] [Indexed: 12/15/2022] Open
Abstract
Glycan recognition by sugar receptors (lectins) is intimately involved in many aspects of cell physiology. However, the factors explaining the exquisite selectivity of their functional pairing are not yet fully understood. Studies toward this aim will also help appraise the potential for lectin-directed drug design. With the network of adhesion/growth-regulatory galectins as therapeutic targets, the strategy to recruit synthetic chemistry to systematically elucidate structure-activity relationships is outlined, from monovalent compounds to glyco-clusters and glycodendrimers to biomimetic surfaces. The versatility of the synthetic procedures enables to take examining structural and spatial parameters, alone and in combination, to its limits, for example with the aim to produce inhibitors for distinct galectin(s) that exhibit minimal reactivity to other members of this group. Shaping spatial architectures similar to glycoconjugate aggregates, microdomains or vesicles provides attractive tools to disclose the often still hidden significance of nanometric aspects of the different modes of lectin design (sequence divergence at the lectin site, differences of spatial type of lectin-site presentation). Of note, testing the effectors alone or in combination simulating (patho)physiological conditions, is sure to bring about new insights into the cooperation between lectins and the regulation of their activity.
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Tiwari VK, Mishra BB, Mishra KB, Mishra N, Singh AS, Chen X. Cu-Catalyzed Click Reaction in Carbohydrate Chemistry. Chem Rev 2016; 116:3086-240. [PMID: 26796328 DOI: 10.1021/acs.chemrev.5b00408] [Citation(s) in RCA: 539] [Impact Index Per Article: 67.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Cu(I)-catalyzed azide-alkyne 1,3-dipolar cycloaddition (CuAAC), popularly known as the "click reaction", serves as the most potent and highly dependable tool for facile construction of simple to complex architectures at the molecular level. Click-knitted threads of two exclusively different molecular entities have created some really interesting structures for more than 15 years with a broad spectrum of applicability, including in the fascinating fields of synthetic chemistry, medicinal science, biochemistry, pharmacology, material science, and catalysis. The unique properties of the carbohydrate moiety and the advantages of highly chemo- and regioselective click chemistry, such as mild reaction conditions, efficient performance with a wide range of solvents, and compatibility with different functionalities, together produce miraculous neoglycoconjugates and neoglycopolymers with various synthetic, biological, and pharmaceutical applications. In this review we highlight the successful advancement of Cu(I)-catalyzed click chemistry in glycoscience and its applications as well as future scope in different streams of applied sciences.
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Affiliation(s)
- Vinod K Tiwari
- Department of Chemistry, Centre of Advanced Study, Institute of Science, Banaras Hindu University , Varanasi, Uttar Pradesh-221005, India
| | - Bhuwan B Mishra
- Department of Chemistry, Centre of Advanced Study, Institute of Science, Banaras Hindu University , Varanasi, Uttar Pradesh-221005, India
| | - Kunj B Mishra
- Department of Chemistry, Centre of Advanced Study, Institute of Science, Banaras Hindu University , Varanasi, Uttar Pradesh-221005, India
| | - Nidhi Mishra
- Department of Chemistry, Centre of Advanced Study, Institute of Science, Banaras Hindu University , Varanasi, Uttar Pradesh-221005, India
| | - Anoop S Singh
- Department of Chemistry, Centre of Advanced Study, Institute of Science, Banaras Hindu University , Varanasi, Uttar Pradesh-221005, India
| | - Xi Chen
- Department of Chemistry, One Shields Avenue, University of California-Davis , Davis, California 95616, United States
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Smadhi M, de Bentzmann S, Imberty A, Gingras M, Abderrahim R, Goekjian PG. Expeditive synthesis of trithiotriazine-cored glycoclusters and inhibition of Pseudomonas aeruginosa biofilm formation. Beilstein J Org Chem 2014; 10:1981-90. [PMID: 25246957 PMCID: PMC4168900 DOI: 10.3762/bjoc.10.206] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2014] [Accepted: 07/30/2014] [Indexed: 12/13/2022] Open
Abstract
Readily accessible, low-valency glycoclusters based on a triazine core bearing D-galactose and L-fucose epitopes are able to inhibit biofilm formation by Pseudomonas aeruginosa. These multivalent ligands are simple to synthesize, are highly soluble, and can be either homofunctional or heterofunctional. The galactose-decorated cluster shows good affinity for Pseudomonas aeruginosa lectin lecA. They are convenient biological probes for investigating the roles of lecA and lecB in biofilm formation.
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Affiliation(s)
- Meriem Smadhi
- Laboratoire Chimie Organique 2 Glycochimie, Université de Lyon, ICBMS, UMR 5246 - CNRS, Université Claude Bernard Lyon 1, Bat. 308 -CPE Lyon, 43 Bd. du 11 Novembre 1918, 69622 Villeurbanne, France. ; Tel: +33-4-72448183 ; Université de Carthage, Faculté des sciences Bizerte, Tunisie
| | - Sophie de Bentzmann
- Laboratoire d'Ingénierie des Systèmes Macromoléculaires, Institut de Biologie Structurale et Microbiologie, CNRS-Aix Marseille University, UMR7255, 31 Chemin Joseph Aiguier, 13402 Marseille Cedex 20, France
| | - Anne Imberty
- Centre de Recherches sur les Macromolécules Végétales (CERMAV), UPR 5301 CNRS et Université Grenoble Alpes, BP53, 38041 Grenoble, France
| | - Marc Gingras
- Aix-Marseille Université, CNRS, CINaM UMR 7325, 163 Avenue de Luminy 13288 Marseille, France
| | | | - Peter G Goekjian
- Laboratoire Chimie Organique 2 Glycochimie, Université de Lyon, ICBMS, UMR 5246 - CNRS, Université Claude Bernard Lyon 1, Bat. 308 -CPE Lyon, 43 Bd. du 11 Novembre 1918, 69622 Villeurbanne, France. ; Tel: +33-4-72448183
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16
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Wang KR, An HW, Rong RX, Cao ZR, Li XL. Fluorescence turn-on sensing of protein based on mannose functionalized perylene bisimides and its fluorescence imaging. Biosens Bioelectron 2014; 58:27-32. [DOI: 10.1016/j.bios.2014.02.038] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2013] [Revised: 02/12/2014] [Accepted: 02/14/2014] [Indexed: 11/30/2022]
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17
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Talaga ML, Fan N, Fueri AL, Brown RK, Chabre YM, Bandyopadhyay P, Roy R, Dam TK. Significant Other Half of a Glycoconjugate: Contributions of Scaffolds to Lectin–Glycoconjugate Interactions. Biochemistry 2014; 53:4445-54. [DOI: 10.1021/bi5001307] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
| | | | | | | | - Yoann M. Chabre
- Department
of Chemistry, Université du Québec à Montréal, Montréal, QC, Canada H3C 3P8
| | | | - René Roy
- Department
of Chemistry, Université du Québec à Montréal, Montréal, QC, Canada H3C 3P8
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18
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Solís D, Bovin NV, Davis AP, Jiménez-Barbero J, Romero A, Roy R, Smetana K, Gabius HJ. A guide into glycosciences: How chemistry, biochemistry and biology cooperate to crack the sugar code. Biochim Biophys Acta Gen Subj 2014; 1850:186-235. [PMID: 24685397 DOI: 10.1016/j.bbagen.2014.03.016] [Citation(s) in RCA: 172] [Impact Index Per Article: 17.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2013] [Revised: 03/13/2014] [Accepted: 03/18/2014] [Indexed: 01/17/2023]
Abstract
BACKGROUND The most demanding challenge in research on molecular aspects within the flow of biological information is posed by the complex carbohydrates (glycan part of cellular glycoconjugates). How the 'message' encoded in carbohydrate 'letters' is 'read' and 'translated' can only be unraveled by interdisciplinary efforts. SCOPE OF REVIEW This review provides a didactic step-by-step survey of the concept of the sugar code and the way strategic combination of experimental approaches characterizes structure-function relationships, with resources for teaching. MAJOR CONCLUSIONS The unsurpassed coding capacity of glycans is an ideal platform for generating a broad range of molecular 'messages'. Structural and functional analyses of complex carbohydrates have been made possible by advances in chemical synthesis, rendering production of oligosaccharides, glycoclusters and neoglycoconjugates possible. This availability facilitates to test the glycans as ligands for natural sugar receptors (lectins). Their interaction is a means to turn sugar-encoded information into cellular effects. Glycan/lectin structures and their spatial modes of presentation underlie the exquisite specificity of the endogenous lectins in counterreceptor selection, that is, to home in on certain cellular glycoproteins or glycolipids. GENERAL SIGNIFICANCE Understanding how sugar-encoded 'messages' are 'read' and 'translated' by lectins provides insights into fundamental mechanisms of life, with potential for medical applications.
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Affiliation(s)
- Dolores Solís
- Instituto de Química Física "Rocasolano", CSIC, Serrano 119, 28006 Madrid, Spain; Centro de Investigación Biomédica en Red de Enfermedades Respiratorias (CIBERES), 07110 Bunyola, Mallorca, Illes Baleares, Spain.
| | - Nicolai V Bovin
- Shemyakin & Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, ul Miklukho-Maklaya 16/10, 117871 GSP-7, V-437, Moscow, Russian Federation.
| | - Anthony P Davis
- School of Chemistry, University of Bristol, Cantock's Close, Bristol BS8 1TS, UK.
| | - Jesús Jiménez-Barbero
- Chemical and Physical Biology, Centro de Investigaciones Biológicas, CSIC, Ramiro de Maeztu, 9, 28040 Madrid, Spain.
| | - Antonio Romero
- Chemical and Physical Biology, Centro de Investigaciones Biológicas, CSIC, Ramiro de Maeztu, 9, 28040 Madrid, Spain.
| | - René Roy
- Department of Chemistry, Université du Québec à Montréal, P.O. Box 8888, Succ. Centre-Ville, Montréal, Québec H3C 3P8, Canada.
| | - Karel Smetana
- Charles University, 1st Faculty of Medicine, Institute of Anatomy, U nemocnice 3, 128 00 Prague 2, Czech Republic.
| | - Hans-Joachim Gabius
- Institute of Physiological Chemistry, Faculty of Veterinary Medicine, Ludwig-Maximilians-University Munich, Veterinärstr. 13, 80539 München, Germany.
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19
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Wang KR, An HW, Rong RX, Cao ZR, Li XL. Synthesis of Biocompatible Glycodendrimer based on Fluorescent Perylene Bisimides and Its Bioimaging. Macromol Rapid Commun 2014; 35:727-34. [DOI: 10.1002/marc.201300916] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2013] [Revised: 01/11/2014] [Indexed: 12/16/2022]
Affiliation(s)
- Ke-Rang Wang
- Key Laboratory of Chemical Biology of Hebei Province; College of Chemistry and Environmental Science; Hebei University; Baoding P. R. China
- Key Laboratory of Medicinal Chemistry and Molecular Diagnosis; Ministry of Education; Hebei University; Baoding P. R. China
| | - Hong-Wei An
- Key Laboratory of Chemical Biology of Hebei Province; College of Chemistry and Environmental Science; Hebei University; Baoding P. R. China
- Key Laboratory of Medicinal Chemistry and Molecular Diagnosis; Ministry of Education; Hebei University; Baoding P. R. China
| | - Rui-Xue Rong
- Department of Immunology; School of Basic Medical Science; Hebei University; Baoding P. R. China
| | - Zhi-Ran Cao
- Department of Immunology; School of Basic Medical Science; Hebei University; Baoding P. R. China
| | - Xiao-Liu Li
- Key Laboratory of Chemical Biology of Hebei Province; College of Chemistry and Environmental Science; Hebei University; Baoding P. R. China
- Key Laboratory of Medicinal Chemistry and Molecular Diagnosis; Ministry of Education; Hebei University; Baoding P. R. China
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20
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Weaver LG, Singh Y, Vamvounis G, Wyatt MF, Burn PL, Blanchfield JT. Carbohydrate globules: molecular asterisk-cored dendrimers for carbohydrate presentation. Polym Chem 2014. [DOI: 10.1039/c3py01123b] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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21
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Kushwaha D, Tiwari VK. Click Chemistry Inspired Synthesis of Glycoporphyrin Dendrimers. J Org Chem 2013; 78:8184-90. [DOI: 10.1021/jo4012392] [Citation(s) in RCA: 68] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Divya Kushwaha
- Department
of Chemistry, Faculty of Science, Banaras Hindu University, Varanasi-221005, India
| | - Vinod K. Tiwari
- Department
of Chemistry, Faculty of Science, Banaras Hindu University, Varanasi-221005, India
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22
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Rajakumar P, Anandhan R, Kannan A. Synthesis and in vitro anti-arthritic, anti-inflammatory studies on hypervalent pyranoside glycodendrimers with triazole bridging point. Supramol Chem 2013. [DOI: 10.1080/10610278.2013.783917] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Affiliation(s)
- Perumal Rajakumar
- a Department of Organic Chemistry , University of Madras, Guindy Campus , Chennai , 600 025 , Tamil Nadu , India
| | - Ramasamy Anandhan
- a Department of Organic Chemistry , University of Madras, Guindy Campus , Chennai , 600 025 , Tamil Nadu , India
| | - Ayyavoo Kannan
- a Department of Organic Chemistry , University of Madras, Guindy Campus , Chennai , 600 025 , Tamil Nadu , India
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23
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Chabre YM, Roy R. Multivalent glycoconjugate syntheses and applications using aromatic scaffolds. Chem Soc Rev 2013; 42:4657-708. [PMID: 23400414 DOI: 10.1039/c3cs35483k] [Citation(s) in RCA: 200] [Impact Index Per Article: 18.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
Glycan-protein interactions are of utmost importance in several biological phenomena. Although the variety of carbohydrate residues in mammalian cells is limited to less than a dozen different sugars, their spatial topographical presentation in what is now associated as the "glycocodes" provides the fundamental keys for specific and high affinity "lock-in" recognition events associated with a wide range of pathologies. Toward deciphering our understanding of these glycocodes, chemists have developed new creative tools that included dendrimer chemistry in order to provide monodisperse multivalent glycoconjugates. This review provides a survey of the numerous aromatic architectures generated for the multivalent presentation of relevant carbohydrates using covalent attachment or supramolecular self-assemblies. The basic concepts toward their controlled syntheses will be described using modern synthetic procedures with a particular emphasis on powerful organometallic methodologies. The large variety of dendritic aromatic scaffolds, together with a brief survey of their unique biophysical and biological properties will be critically reviewed. The distinctiveness of the resulting multivalent glycoarchitectures, encompassing glycoclusters, glycodendrimers and molecularly defined self-assemblies, in forming well organized cross-linked lattices with multivalent carbohydrate binding proteins (lectins) together with their photophysical, medical, and imaging properties will also be briefly highlighted. The topic will be presented in increasing order of aromatic backbone complexities and will end with fullerenes together with self-assembled nanostructures, thus complementing the various scaffolds described in this special thematic issue dedicated to multivalent glycoscience.
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Affiliation(s)
- Yoann M Chabre
- Pharmaqam - Department of Chemistry, Université du Québec à Montréal, P.O. Box 8888, Succ. Centre-ville, Montréal, Québec, Canada H3C 3P8
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24
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Wang KR, Wang YQ, An HW, Zhang JC, Li XL. A Triazatruxene-Based Glycocluster as a Fluorescent Sensor for Concanavalin A. Chemistry 2013; 19:2903-9. [DOI: 10.1002/chem.201200905] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2012] [Revised: 11/02/2012] [Indexed: 01/06/2023]
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25
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Wang KR, An HW, Qian F, Wang YQ, Zhang JC, Li XL. Synthesis, optical properties and binding interactions of a multivalent glycocluster based on a fluorescent perylene bisimide derivative. RSC Adv 2013. [DOI: 10.1039/c3ra44675a] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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26
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Synthesis of perylene bisimide-centered glycodendrimer and its interactions with concanavalin A. Bioorg Med Chem Lett 2013; 23:480-3. [DOI: 10.1016/j.bmcl.2012.11.049] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2012] [Revised: 11/10/2012] [Accepted: 11/13/2012] [Indexed: 11/17/2022]
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27
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Abstract
Combining nanotechnology with glycobiology has triggered an exponential growth of research activities in the design of novel functional bionanomaterials (glyconanotechnology). More specifically, recent synthetic advances towards the tailored and versatile design of glycosylated nanoparticles namely glyconanoparticles, considered as synthetic mimetics of natural glycoconjugates, paved the way toward diverse biomedical applications. The accessibility of a wide variety of these structured nanosystems, in terms of shapes, sizes, and organized around stable nanoparticles have readily contributed to their development and applications in nanomedicine. In this context, glycosylated gold-nanoparticles (GNPs), glycosylated quantum dots (QDs), fullerenes, single-wall natotubes (SWNTs), and self-assembled glycononanoparticles using amphiphilic glycopolymers or glycodendrimers have received considerable attention to afford powerful imaging, therapeutic, and biodiagnostic devices. This review will provide an overview of the most recent syntheses and applications of glycodendrimers in glycoscience that have permitted to deepen our understanding of multivalent carbohydrate-protein interactions. Together with synthetic breast cancer vaccines, inhibitors of bacterial adhesions to host tissues including sensitive detection devices, these novel bionanomaterials are finding extensive relevance.
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28
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Freitas JC, Couto TR, Paulino AA, de Freitas Filho JR, Malvestiti I, Oliveira RA, Menezes PH. Stereoselective synthesis of pseudoglycosides catalyzed by TeCl4 under mild conditions. Tetrahedron 2012. [DOI: 10.1016/j.tet.2012.09.073] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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29
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Freitas JC, Couto TR, Paulino AA, de Freitas Filho JR, Malvestiti I, Oliveira RA, Menezes PH. Stereoselective synthesis of pseudoglycosides catalyzed by TeCl4 under mild conditions. Tetrahedron 2012. [DOI: 10.1016/j.tet.2012.07.070] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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30
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Ribeiro-Viana R, García-Vallejo JJ, Collado D, Pérez-Inestrosa E, Bloem K, van Kooyk Y, Rojo J. BODIPY-Labeled DC-SIGN-Targeting Glycodendrons Efficiently Internalize and Route to Lysosomes in Human Dendritic Cells. Biomacromolecules 2012; 13:3209-19. [DOI: 10.1021/bm300998c] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Affiliation(s)
- Renato Ribeiro-Viana
- Glycosystems Laboratory, Instituto
de Investigaciones Químicas (IIQ), CSIC − Universidad de Sevilla, Avenida Américo Vespucio
49, Seville 41092 Spain
| | - Juan J. García-Vallejo
- Department of Molecular Cell Biology & Immunology, VU University Medical Center, Amsterdam, The Netherlands
| | - Daniel Collado
- Andalusian Centre of Nanomedicine
and Biotechnology-BIONAND, Parque Tecnológico de Andalucía, 29590 Malaga, Spain
- Department of Organic Chemistry,
Faculty of Science, University of Malaga, 29071 Malaga, Spain
| | - Ezequiel Pérez-Inestrosa
- Andalusian Centre of Nanomedicine
and Biotechnology-BIONAND, Parque Tecnológico de Andalucía, 29590 Malaga, Spain
- Department of Organic Chemistry,
Faculty of Science, University of Malaga, 29071 Malaga, Spain
| | - Karien Bloem
- Department of Molecular Cell Biology & Immunology, VU University Medical Center, Amsterdam, The Netherlands
| | - Yvette van Kooyk
- Department of Molecular Cell Biology & Immunology, VU University Medical Center, Amsterdam, The Netherlands
| | - Javier Rojo
- Glycosystems Laboratory, Instituto
de Investigaciones Químicas (IIQ), CSIC − Universidad de Sevilla, Avenida Américo Vespucio
49, Seville 41092 Spain
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31
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Khiar N, Navas R, Fernández I. ‘ClickCarb’: modular sugar based ligands via click chemistry. Tetrahedron Lett 2012. [DOI: 10.1016/j.tetlet.2011.11.043] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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32
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Rajakumar P, Anandhan R. Synthesis and In-vitro anti-inflammatory activity of novel glycodendrimers with benzene 1,3,5 carboxamide core and triazole as branching unit. Eur J Med Chem 2011; 46:4687-95. [DOI: 10.1016/j.ejmech.2011.06.017] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2011] [Revised: 06/09/2011] [Accepted: 06/13/2011] [Indexed: 12/31/2022]
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33
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Zhang R, Wang LC, Li M, Zhang XM, Li YB, Shen YT, Zheng QY, Zeng QD, Wang C. Heterogeneous bilayer molecular structure at a liquid-solid interface. NANOSCALE 2011; 3:3755-3759. [PMID: 21796300 DOI: 10.1039/c1nr10387c] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
Hexaphenylbenzene (HPB) derivatives, HPB-6a and HPB-6pa, can form a supramolecular network which is stabilized by the intermolecular hydrogen bonding between carboxyl group at an octanoic acid/graphite interface. The observation of the heterogeneous bilayer structure formed exclusively by coronene and HPB-6pa at the octanoic acid/graphite interface is reported. Pronounced selectivity of coronene for the supramolecular networks with different sizes is reflected through the formation of bilayer structure for HPB-6pa network with the introduction of coronene as the guest species, indicating stronger interactions between HPB-6pa and coronene.
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Affiliation(s)
- Rui Zhang
- National Center for Nanoscience and Technology (NCNST), Beijing 100190, P. R. China
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34
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Chabre YM, Giguère D, Blanchard B, Rodrigue J, Rocheleau S, Neault M, Rauthu S, Papadopoulos A, Arnold AA, Imberty A, Roy R. Combining Glycomimetic and Multivalent Strategies toward Designing Potent Bacterial Lectin Inhibitors. Chemistry 2011; 17:6545-62. [DOI: 10.1002/chem.201003402] [Citation(s) in RCA: 84] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2010] [Indexed: 12/13/2022]
Affiliation(s)
- Yoann M. Chabre
- Pharmaqam, Department of Chemistry, Université du Québec à Montréal, P.O. Box 8888, Succ. Centre‐Ville, Montreal, Québec, H3C 3P8 (Canada), Fax: (+1) 514‐987‐4054
| | - Denis Giguère
- Pharmaqam, Department of Chemistry, Université du Québec à Montréal, P.O. Box 8888, Succ. Centre‐Ville, Montreal, Québec, H3C 3P8 (Canada), Fax: (+1) 514‐987‐4054
| | - Bertrand Blanchard
- CERMAV CNRS (Affiliated to Université Joseph Fourier and belonging to ICMG), BP 53, 38041 Grenoble cedex 9 (France), Fax: (+33) 476‐547‐203
| | - Jacques Rodrigue
- Pharmaqam, Department of Chemistry, Université du Québec à Montréal, P.O. Box 8888, Succ. Centre‐Ville, Montreal, Québec, H3C 3P8 (Canada), Fax: (+1) 514‐987‐4054
| | - Sylvain Rocheleau
- Pharmaqam, Department of Chemistry, Université du Québec à Montréal, P.O. Box 8888, Succ. Centre‐Ville, Montreal, Québec, H3C 3P8 (Canada), Fax: (+1) 514‐987‐4054
| | - Mathieu Neault
- Pharmaqam, Department of Chemistry, Université du Québec à Montréal, P.O. Box 8888, Succ. Centre‐Ville, Montreal, Québec, H3C 3P8 (Canada), Fax: (+1) 514‐987‐4054
| | - Subhash Rauthu
- Pharmaqam, Department of Chemistry, Université du Québec à Montréal, P.O. Box 8888, Succ. Centre‐Ville, Montreal, Québec, H3C 3P8 (Canada), Fax: (+1) 514‐987‐4054
| | - Alex Papadopoulos
- Pharmaqam, Department of Chemistry, Université du Québec à Montréal, P.O. Box 8888, Succ. Centre‐Ville, Montreal, Québec, H3C 3P8 (Canada), Fax: (+1) 514‐987‐4054
| | - Alexandre A. Arnold
- Pharmaqam, Department of Chemistry, Université du Québec à Montréal, P.O. Box 8888, Succ. Centre‐Ville, Montreal, Québec, H3C 3P8 (Canada), Fax: (+1) 514‐987‐4054
| | - Anne Imberty
- CERMAV CNRS (Affiliated to Université Joseph Fourier and belonging to ICMG), BP 53, 38041 Grenoble cedex 9 (France), Fax: (+33) 476‐547‐203
| | - René Roy
- Pharmaqam, Department of Chemistry, Université du Québec à Montréal, P.O. Box 8888, Succ. Centre‐Ville, Montreal, Québec, H3C 3P8 (Canada), Fax: (+1) 514‐987‐4054
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