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Ma Y, Liu J, Li F, Wang F, Kitsopoulos TN. Roaming Dynamics in the Photodissociation of Formic Acid at 230 nm. J Phys Chem A 2019; 123:3672-3677. [PMID: 30969120 DOI: 10.1021/acs.jpca.9b00724] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Roaming dynamics is observed in the photodissociation of formic acid (HCOOH) at 230 nm by using the slice imaging method. In combination with rotational state selective (2 + 1) resonance-enhanced multiphoton ionization of the CO fragments, the speed distributions of the CO fragments exhibit a low recoil velocity at low rotational levels of J = 9 and 20, while the velocity distributions of CO at high rotational levels of J = 30 and 48 show a relatively large recoil velocity. The experimental results indicate that the roaming of OH radical should be related with the formation of CO + H2O channel at the present photolysis energy. Unlike the roaming pathways occurring in H2CO that can be described by loose flat potential, our CO speed distribution analysis suggests the presence of a "tight" flat potential in the roaming dynamics of HCOOH molecules.
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Affiliation(s)
- Yujie Ma
- Department of Chemistry and Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Collaborative Innovation Centre of Chemistry for Energy Materials , Fudan University , Shanghai 200433 , P. R. China
| | - Jiaxing Liu
- Department of Chemistry and Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Collaborative Innovation Centre of Chemistry for Energy Materials , Fudan University , Shanghai 200433 , P. R. China
| | - Fangfang Li
- Department of Chemistry and Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Collaborative Innovation Centre of Chemistry for Energy Materials , Fudan University , Shanghai 200433 , P. R. China
| | - Fengyan Wang
- Department of Chemistry and Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Collaborative Innovation Centre of Chemistry for Energy Materials , Fudan University , Shanghai 200433 , P. R. China
| | - Theofanis N Kitsopoulos
- Department of Dynamics at Surfaces, Max Planck Institute for Biophysical Chemistry, Göttingen, Germany; Institute of Electronic Structure and Laser, FORTH, Heraklion, Greece; Department of Chemistry , University of Crete , Heraklion , Greece
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A Trajectory-Based Method to Explore Reaction Mechanisms. Molecules 2018; 23:molecules23123156. [PMID: 30513663 PMCID: PMC6321347 DOI: 10.3390/molecules23123156] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2018] [Revised: 11/23/2018] [Accepted: 11/29/2018] [Indexed: 12/02/2022] Open
Abstract
The tsscds method, recently developed in our group, discovers chemical reaction mechanisms with minimal human intervention. It employs accelerated molecular dynamics, spectral graph theory, statistical rate theory and stochastic simulations to uncover chemical reaction paths and to solve the kinetics at the experimental conditions. In the present review, its application to solve mechanistic/kinetics problems in different research areas will be presented. Examples will be given of reactions involved in photodissociation dynamics, mass spectrometry, combustion chemistry and organometallic catalysis. Some planned improvements will also be described.
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Pérez-Soto R, Vázquez SA, Martínez-Núñez E. Photodissociation of acryloyl chloride at 193 nm: interpretation of the product energy distributions, and new elimination pathways. Phys Chem Chem Phys 2016; 18:5019-26. [DOI: 10.1039/c5cp07759a] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The use of an automated TS search method leads to the finding of novel HCl elimination pathways.
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Affiliation(s)
- Raúl Pérez-Soto
- Departamento de Química Física and Centro Singular de Investigación en Química Biológica y Materiales Moleculares (CIQUS)
- Campus Vida
- Universidade de Santiago de Compostela
- Santiago de Compostela
- Spain
| | - Saulo A. Vázquez
- Departamento de Química Física and Centro Singular de Investigación en Química Biológica y Materiales Moleculares (CIQUS)
- Campus Vida
- Universidade de Santiago de Compostela
- Santiago de Compostela
- Spain
| | - Emilio Martínez-Núñez
- Departamento de Química Física and Centro Singular de Investigación en Química Biológica y Materiales Moleculares (CIQUS)
- Campus Vida
- Universidade de Santiago de Compostela
- Santiago de Compostela
- Spain
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Maeda S, Taketsugu T, Ohno K, Morokuma K. From Roaming Atoms to Hopping Surfaces: Mapping Out Global Reaction Routes in Photochemistry. J Am Chem Soc 2015; 137:3433-45. [DOI: 10.1021/ja512394y] [Citation(s) in RCA: 82] [Impact Index Per Article: 9.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Affiliation(s)
- Satoshi Maeda
- Department
of Chemistry, Faculty of Science, Hokkaido University, Sapporo 060-0810, Japan
| | - Tetsuya Taketsugu
- Department
of Chemistry, Faculty of Science, Hokkaido University, Sapporo 060-0810, Japan
| | - Koichi Ohno
- Graduate
School of Science, Tohoku University, Sendai 980-8578, Japan
- Institute for Quantum Chemical Exploration, Tokyo 108-0022, Japan
| | - Keiji Morokuma
- Fukui
Institute for Fundamental Chemistry, Kyoto University, Kyoto 606-8103, Japan
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Ryazantsev SV, Feldman VI. Radiation-induced transformations of matrix-isolated formic acid: evidence for the HCOOH → HOCO + H channel. Phys Chem Chem Phys 2015; 17:30648-58. [DOI: 10.1039/c5cp05446j] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
HOCO radicals are produced under X-ray irradiation of isolated formic acid at low temperatures, and possible mechanisms and astrochemical implications are discussed.
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6
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Martínez-Núñez E. An automated method to find transition states using chemical dynamics simulations. J Comput Chem 2014; 36:222-34. [DOI: 10.1002/jcc.23790] [Citation(s) in RCA: 121] [Impact Index Per Article: 12.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2014] [Accepted: 11/05/2014] [Indexed: 02/01/2023]
Affiliation(s)
- Emilio Martínez-Núñez
- Departamento de Química Física and Centro Singular de Investigación en Química Biológica y Materiales Moleculares; Campus Vida, Universidade de Santiago de Compostela; 15782 Santiago de Compostela Spain
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Paulson LO, Mutunga FM, Follett SE, Anderson DT. Reactions of Atomic Hydrogen with Formic Acid and Carbon Monoxide in Solid Parahydrogen I: Anomalous Effect of Temperature. J Phys Chem A 2014; 118:7640-52. [DOI: 10.1021/jp502470j] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Leif O. Paulson
- Department of Chemistry, University of Wyoming, Laramie, Wyoming 82071, United States
| | - Fredrick M. Mutunga
- Department of Chemistry, University of Wyoming, Laramie, Wyoming 82071, United States
| | - Shelby E. Follett
- Department of Chemistry, University of Wyoming, Laramie, Wyoming 82071, United States
| | - David T. Anderson
- Department of Chemistry, University of Wyoming, Laramie, Wyoming 82071, United States
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Harabuchi Y, Maeda S, Taketsugu T, Ohno K. Direct Pathway for Water–Gas Shift Reaction in Gas Phase. CHEM LETT 2014. [DOI: 10.1246/cl.130940] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Yu Harabuchi
- Department of Chemistry, Faculty of Science, Hokkaido University
| | - Satoshi Maeda
- Department of Chemistry, Faculty of Science, Hokkaido University
| | | | - Koichi Ohno
- Department of Chemistry, Graduate School of Science, Tohoku University
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Maeda S, Taketsugu T, Morokuma K. Automated Exploration of Photolytic Channels of HCOOH: Conformational Memory via Excited-State Roaming. J Phys Chem Lett 2012; 3:1900-1907. [PMID: 26292011 DOI: 10.1021/jz300728q] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
To elucidate the photodissociation mechanism of HCOOH, we systematically explored reaction pathways starting from the first excited singlet state (S1) by using automated reaction path search methods. All critical points, that is, minima, transition states, minimum energy conical intersections, and minima on seam of crossing, for the S0, T1, and S1 potential energy surfaces (PESs) obtained in the present search were optimized at the CASPT2 level. The structure list obtained by the search explained all experimentally reported photolytic channels. A new mechanism for the previously suggested but unexplained conformational memory in the 193 nm photolysis is proposed, which involves two steps: partial dissociation and succeeding roaming of one of H atoms on the S1 PES, followed by intramolecular recombination on the S0 PES after radiationless transition through a conical intersection at a partially dissociated geometry. This is partially similar to the excited-state roaming recently discovered for the NO3 radical.
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Affiliation(s)
- Satoshi Maeda
- †Department of Chemistry, Faculty of Science, Hokkaido University, Sapporo 060-0810, Japan
| | - Tetsuya Taketsugu
- †Department of Chemistry, Faculty of Science, Hokkaido University, Sapporo 060-0810, Japan
| | - Keiji Morokuma
- ‡Fukui Institute for Fundamental Chemistry, Kyoto University, Kyoto 606-8103, Japan
- §Department of Chemistry and Cherry L. Emerson Center for Scientific Computation, Emory University, Atlanta, Georgia 30322, United States
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Huang C, Zhang C, Yang X. State-selected imaging studies of formic acid photodissociation dynamics. J Chem Phys 2010; 132:154306. [DOI: 10.1063/1.3386576] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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11
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Singh PC, Shen L, Kim MH, Suits AG. Photodissociation and photoelectron imaging of molecular ions: probing multisurface and multichannel dynamics. Chem Sci 2010. [DOI: 10.1039/c0sc00295j] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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Olbert-Majkut A, Ahokas J, Lundell J, Pettersson M. Photolysis of HCOOH monomer and dimer in solid argon: Raman characterization of in situ formed molecular complexes. Phys Chem Chem Phys 2010; 12:7138-47. [DOI: 10.1039/b926658e] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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13
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Shen L, Singh PC, Kim M, Zhang B, Suits AG. Ion and Electron Imaging Study of Isobutanal Photoionization Dynamics. J Phys Chem A 2008; 113:68-74. [DOI: 10.1021/jp807911e] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Lei Shen
- Department of Chemistry, Wayne State University, Detroit, Michigan 48202
| | | | - Myunghua Kim
- Department of Chemistry, Wayne State University, Detroit, Michigan 48202
| | - Bailin Zhang
- Department of Chemistry, Wayne State University, Detroit, Michigan 48202
| | - Arthur G. Suits
- Department of Chemistry, Wayne State University, Detroit, Michigan 48202
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Martínez-Núñez E, Vázquez S, Granucci G, Persico M, Estevez CM. Photodissociation of formic acid: A trajectory surface hopping study. Chem Phys Lett 2005. [DOI: 10.1016/j.cplett.2005.06.091] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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15
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Borges I, Rocha A, Martínez-Núñez E, Vázquez S. Theoretical investigations on the vibronic coupling between the electronic states S0 and S1 of formic acid including the photodissociation at 248nm. Chem Phys Lett 2005. [DOI: 10.1016/j.cplett.2005.03.077] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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