Spherulitic Growth of Hen Egg-White Lysozyme Crystals

Viologen-based supramolecular crystal gels: gelation kinetics and sensitivity to temperature

Supramolecular crystal gels, a subset of molecular gels, are formed through the self-assembly of low molecular weight gelators into interconnecting crystalline fibers, creating a three-dimensional soft solid network. This study focuses on the formation and properties of viologen-based supramolecular crystalline gels. It aims to answer key questions about the tunability of network properties and the origin of these properties through in-depth analyses of the gelation kinetics triggered by thermal quenching. Experimental investigations, including UV-Vis absorption spectroscopy, rheology, microscopy and scattering measurements, contribute to a comprehensive and self-consistent understanding of the system kinetics. We confirm that viologen-based gelators crystallize by forming nanometer radius hollow tubes that assemble into micro to millimetric spherulites. We then show that crystallization follows the Avrami theory and is based on pre-existing nuclei. We also establish that the growth is interface-controlled, leading the hollow tubes to branch into spherulites with fractal structures. Finally, we demonstrate that the gel properties can be tuned depending on the quenching temperature. Lowering the temperature results in the formation of denser and smaller spherulites. In contrast, the gel's elasticity is not significantly affected by the quench temperature, leading us to hypothesize that the densification of spherulites occurs at the expense of connectivity between spherulites.

Polymorphic protein phase transitions driven by surface anisotropy

Phase transitions of proteins are strongly influenced by surface chemical modifications or mutations. Human γD-crystallin (HGD) single-mutants have been extensively studied because they are associated with the onset of juvenile cataract. However, they have also provided a rich library of molecules to examine how specific inter-protein interactions direct protein assembly, providing new insights and valuable experimental data for coarse-grained patchy-particle models. Here, we demonstrate that the addition of new inter-protein interactions by mutagenesis is additive and increases the number and variety of condensed phases formed by proteins. When double mutations incorporating two specific single point mutations are made, the properties of both single mutations are retained in addition to the formation of a new condensed phase. We find that the HGD double-mutant P23VC110M self-assembles into spherical particles with retrograde solubility, orthorhombic crystals, and needle/plate shape crystals, while retaining the ability to undergo liquid-liquid phase separation. This rich polymorphism is only partially predicted by the experimental data on the constituent single mutants. We also report a previously un-characterized amorphous protein particle, with unique properties that differ from those of protein spherulites, protein particulates previously described. The particles we observe are amorphous, reversible with temperature, tens of microns in size, and perfectly spherical. When they are grown on pristine surfaces, they appear to form by homogeneous nucleation, making them unique, and we believe a new form of protein condensate. This work highlights the challenges in predicting protein behavior, which has frustrated rational assembly and crystallization but also provides rich data to develop new coarse-grained models to explain the observed polymorphism.

Reproducible Formation of Insulin Superstructures: Amyloid-Like Fibrils, Spherulites, and Particulates

Inducing protein aggregation in vitro under various formulation and stress conditions may lead to an increased understanding of the different association routes a protein can undergo. However, a range of factors can affect the aggregation process, often leading to heterogenous samples and experimental irreproducibility between labs. Here, we present detailed methods to reproducibly form homogenous samples of superstructures: amyloid-like fibrils, spherulites, and particulates from human insulin. We discuss pitfalls and good practice in the lab, with the aim of creating awareness on the potential sources of artefacts for protein stability and aggregation studies.

Subtle pH variation around pH 4.0 affects aggregation kinetics and aggregate characteristics of recombinant human insulin

Insulin is a biotherapeutic protein, which, depending on environmental conditions such as pH, has been shown to form a large variety of aggregates with different structures and morphologies. This work focuses on the formation and characteristics of insulin particulates, dense spherical aggregates having diameters spanning from nanometre to low-micron size. An in-depth investigation of the system is obtained by applying a broad range of techniques for particle sizing and characterisation. An interesting observation was achieved regarding the formation kinetics and aggregate characteristics of the particulates; a subtle change in the pH from pH 4.1 to pH 4.3 markedly affected the kinetics of the particulate formation and led to different particulate sizes, either nanosized or micronsized particles. Also, a clear difference between the secondary structure of the protein particulates formed at the two pH values was observed, where the nanosized particulates had an increased content of aggregated β-structure compared to the micronsized particles. The remaining characteristics of the particles were identical for the two particulate populations. These observations highlight the importance of carefully studying the formulation design space and of knowing the impact of parameters such as pH on the aggregation to secure a drug product in control. Furthermore, the identification of particles only varying in few parameters, such as size, are considered highly valuable for studying the effect of particle features on the immunogenicity potential.

A Thermodynamic Approach for the Prediction of Oiling Out Boundaries from Solubility Data

Many pharmaceutical molecules, fine chemicals, and proteins exhibit liquid–liquid phase separation (LLPS, also known as oiling out) during solution crystallization. LLPS is of significant concern in crystallization process development, as oiling out can compromise the effectiveness of a crystallization and can lead to operational problems. A comprehensive methodology that allows a process scientist/engineer to characterize the various phase boundaries relevant to oiling out is currently lacking. In this work, we present a modeling framework useful in predicting the binodal, spinodal, and gelation boundaries starting from the solubility data of a solute that is prone to oiling out. We collate the necessary theoretical concepts from the literature and describe a unified approach to model the phase equilibria of solute–solvent systems from first principles. The modeling effort is validated using experimental data reported in the literature for various solute–solvent systems. The predictive methods presented in this work can be easily implemented and help a process engineer establish the design space for a crystallization process that is affected by liquid–liquid phase separation.

Characterization of heat induced spherulites of lysozyme reveals new insight on amyloid initiation

Here, we report results obtained during our experiments to visualize how heat transforms globular protein, lysozyme into building block of β-amyloids. Light scattering experiments showed formation of lower order associated species around 50-70 °C followed by rapid cooperativity to β-amyloid fibrils. Interestingly, crystallization drops set at higher temperatures either led to aggregates or spherulites. The latter possess an amorphous β-fibril rich core with thin crystalline needles projecting outwards. Diffraction of the crystalline outgrowths revealed novel dimers and trimers of lysozyme where individual chains were similar to monomer with marginal gain in β-sheet content. Importantly, analysis of Amide I stretching frequencies showed that protein loses its secondary structure at temperatures higher than where we obtained crystals followed by rapid gain in β-sheet content. Interestingly, attempts to use the needles as seeds for more crystals led to "broom-like" fibril formations at the ends. Further, aggregation inhibitors like arginine and benzyl alcohol completely obliterated spherulites formation during crystallization. Refinement of crystals of lysozyme in presence of these molecules showed these small molecules bind to the interfaces of heat associated dimers and trimers. Overall our work concludes that heat induced weakly associated structures of lysozyme are the first step towards its amyloid formation.

Collapsed state of polyglutamic acid results in amyloid spherulite formation

Self-assembly of proteins and peptides into amyloid fibrils involves multiple distinct intermediates and late-stage fibrillar polymorphs. Understanding the conditions and mechanisms that promote the formation of one type of intermediate and polymorph over the other represents a fundamental challenge. Answers to this question are also of immediate biomedical relevance since different amyloid aggregate species have been shown to have distinct pathogenic potencies. One amyloid polymorph that has received comparatively little attention are amyloid spherulites. Here we report that self-assembly of the intrinsically disordered polymer poly(L-glutamic) acid (PLE) can generate amyloid spherulites. We characterize spherulite growth kinetics, as well as the morphological, optical and tinctorial features of this amyloid polymorph previously unreported for PLE. We find that PLE spherulites share both tinctorial and structural characteristics with their amyloid fibril counterparts. Differences in PLE's molecular weight, polydispersity or chemistry could not explain the selective propensity toward either fibril or spherulite formation. Instead, we provide evidence that PLE polymers can exist in either a collapsed globule or an extended random coil conformation. The collapsed globule consistently produces spherulites while the extended coil assembles into disordered fibril bundles. This results suggests that these 2 PLE conformers directly affect the morphology of the resulting macroscopic amyloid assembly.

Rheological profiling of organogels prepared at critical gelling concentrations of natural waxes in a triacylglycerol solvent

The aim of this study was to use a detailed rheological characterization to gain new insights into the gelation behavior of natural waxes. To make a comprehensive case, six natural waxes (differing in the relative proportion of chemical components: hydrocarbons, fatty alcohols, fatty acids, and wax esters) were selected as organogelators to gel high-oleic sunflower oil. Flow and dynamic rheological properties of organogels prepared at critical gelling concentrations (Cg) of waxes were studied and compared using drag (stress ramp and steady flow) and oscillatory shear (stress and frequency sweeps) tests. Although, none of the organogels satisfied the rheological definition of a "strong gel" (G″/G' (ω) ≤ 0.1), on comparing the samples, the strongest gel (highest critical stress and dynamic, apparent, and static yield stresses) was obtained not with wax containing the highest proportion of wax esters alone (sunflower wax, SFW) but with wax containing wax esters along with a higher proportion of fatty alcohols (carnauba wax, CRW) although at a comparatively higher Cg (4%wt for latter compared to 0.5%wt for former). As expected, gel formation by waxes containing a high proportion of lower melting fatty acids (berry, BW, and fruit wax, FW) required a comparatively higher Cg (6 and 7%wt, respectively), and in addition, these gels showed the lowest values for plateau elastic modulus (G'LVR) and a prominent crossover point at higher frequency. The gelation temperatures (TG'=G″) for all the studied gels were lower than room temperature, except for SFW and CRW. The yielding-type behavior of gels was evident, with most gels showing strong shear sensitivity and a weak thixotropic recovery. The rheological behavior was combined with the results of thermal analysis and microstructure studies (optical, polarized, and cryo-scanning electron microscopy) to explain the gelation properties of these waxes.

Salt-induced pattern formation in evaporating droplets of lysozyme solutions

Solute self-organization during evaporation of colloidal sessile droplets has attracted the attention of researchers over the past few decades due to a variety of technological applications. Recently, pattern formation during evaporation of various biofluids has been studied due to potential applications in screening and diagnosis. The complex morphological patterns in the deposit are unique to various disorders and are influenced by various physical mechanisms occurring during evaporation. These complex patterns can be better understood by studying evaporation of model solutions of biological relevance. Here, we examine the general features of pattern formation during sessile droplet evaporation of aqueous lysozyme solutions with varying concentrations of NaCl. Lysozyme is a globular protein found in biological fluids such as tears and saliva. The morphological evolution of the droplet is studied by time-lapse video during evaporation via reflection optical microscopy. The final deposits exhibit an amorphous peripheral ring and interior regions containing crystallites and dendritic forms, dependent on NaCl concentration. Scanning electron microscopy (SEM) images demonstrate the multi-scale hierarchical nature of these structures.

Characteristic size for onset of coffee-ring effect in evaporating lysozyme-water solution droplets

Liquid droplets containing suspended particles deposited on a solid surface often form a ring-like structure due to the redistribution of solute during evaporation, a phenomenon known as the "coffee ring effect". The complex patterns left on the substrate after evaporation are characteristic of the nature of the solute and the particle transport mechanisms. In this study, the morphological evolution and conditions for coffee ring formation for simplified model biological solutions of DI water and lysozyme are examined by AFM and optical microscopy. Lysozyme is a globular protein found in high concentration, for example, in human tears and saliva. The drop diameters studied are very small, ranging from 1 to 50 μm. In this size range, protein motion and the resulting dried residue morphology are highly influenced by the decreased evaporation time of the drop. In this work, we consider the effect of droplet size and concentration on the morphology of the deposited drop as well as the minimal conditions for coffee ring formation in this system. Two distinct deposit types are observed: a simple cap-shaped deposit for drops with small diameters and a ring-like deposit at larger diameters. Ring formation occurs at a critical diameter, which depends systematically on initial lysozyme concentration.

Crystal growth near moving contact lines on homogeneous and chemically patterned surfaces

We have systematically investigated how solution crystallization in the proximity of moving contact lines can be modulated by the parameters of the coating flow as well as chemical patterning of the substrate surface. We have studied the monoclinic model substance nicotinamide in the solvent isopropanol, which tends to form needle-like crystals in bulk solution. Three crystallization regimes were identified dependent on the coating speed. At high speeds viscous entrainment dominates over solvent evaporation, and an essentially azimuthally isotropic, spherulithic morphology results. For intermediate speeds a branched morphology with preferential alignment parallel to the coating direction is observed. For low speeds, filament-like crystal patterns well aligned with the coating direction were obtained.

Additional supra-self-assembly of human serum albumin under amyloid-like-forming solution conditions

Protein aggregation has a multitude of consequences ranging from affecting protein expression to its implication in different diseases. Of recent interest is the specific form of aggregation leading to the formation of amyloid fibrils, structures associated with diseases such as Alzheimer's disease. These fibrils can further associate in other more complex structures such as fibrillar gels, plaques, or spherulitic structures. In the present work, we describe the physical and structural properties of additional supraself-assembled structures of human serum albumin under solution conditions in which amyloid-like fibrils are formed. We have detected the formation of ordered aggregates of amyloid fibrils, i.e., spherulites which possess a radial arrangement of the fibrils around a disorganized protein core and sizes of several micrometers by means of polarized optical microscopy, laser confocal microscopy, and transmission electron microscopy. These spherulites are detected both in solution and embedded in an isotropic matrix of fibrillar gels. In this regard, we have also noted the formation of protein gels when the protein concentration and/or ionic strength exceds a threshold value (the gelation point) as observed by rheometry. Fibrillar gels are formed through intermolecular nonspecific association of amyloid fibrils at a pH far away from the isolectric point of the protein where protein molecules seem to display a "solid-like" behavior due to the existence of non-DLVO (Derjaguin-Landau-Verwey-Overbeck) intermolecular repulsive forces. As the solution ionic strength increases, a coarsening of this type of gel is observed by environmental scanning microscopy. In contrast, at pH close to the protein isoelectric point, particulate gels are formed due to a faster aggregation process, which does not allow substantial structural reorganization to enable the formation of ordered structures. This behavior also additionally corroborates that the existence of particulates might also be a generic property of all polypeptide chains as amyloid fibril formation under suitable conditions.

Investigating the inner structure of irregular beta-lactoglobulin spherulites

When beta-lactoglobulin in low p H aqueous solutions is exposed to high temperature for extended time, spherulites composed of amyloid fibrils of the beta-lactoglobulin protein form. Many of these spherulites have fibrils that radiate out from a centre and, under crossed polarisers, exhibit a symmetric Maltese Cross structure. However, a significant fraction (50 of the 101 observed spherulites) of beta-lactoglobulin spherulites formed under these conditions demonstrate various forms of irregularity in apparent structure. The irregularities of spherulites structures were qualitatively investigated by comparing optical microscopy images observed under crossed polarisers to computationally produced images of various internal structures. In this way, inner spherulite structures are inferred from microscopy images. Modelled structures that were found to produce computed images similar to some of the experimentally viewed images include fibrils curving as they radiate from a single nucleation point; multiple spherulites nucleating in close proximity to one another; and fibrils curving in opposite directions above and below a single nucleation point.

Confinement effects on the self-assembly of 1,3:2,4-Di-p-methylbenzylidene sorbitol based organogel

1,3:2,4-di- p-methylbenzylidene sorbitol (MDBS) is a small organic molecule that is capable of inducing self-assembly in a wide variety of organic solvents and of forming organogels. In this paper, we present a novel approach to tune the network architectures of organogels by utilizing geometric confinement while varying the gelator concentration. Self-assembly of MDBS in propylene carbonate (PC) is investigated in a series of microchannels with widths varying from 20 to 80 mum and the gelator concentration varying from 2 to 7 wt %. We demonstrate by optical microscopy and scanning electron microscopy (SEM) that a transition from fibrillar structure to sheaflike spherulite structure occurs when (a) the channel width is increased for fixed gelator concentrations and (b) gelator concentration is increased for fixed channel widths. A phase diagram is built based on these observations. Polarized microscopy and transmission electron microscopy (TEM) images are also obtained for organogel under unconfined condition to display the spherulite structures viewed under different length scales. The thermal properties of the organogel are measured by differential scanning calorimetry (DSC) to verify the structural difference obtained under confined and unconfined conditions and the structure stability. Our results provide a novel strategy to control the topological structure of self-assembled systems and to modify their thermal properties via geometric confinement.

Selection of Protein Crystal Forms Facilitated by Polymer-Induced Heteronucleation

Crystallization of biological macromolecules as high quality single crystals is critical for determining their structure and facilitates the rational design of drugs. Because macromolecules often crystallize in multiple phases that have unique diffraction properties, the selective production of phases is desirable. Furthermore, determining multiple structures allows for a greater understanding of the relationship between crystal packing and conformation. With the aim of exploiting the polymer-induced heteronucleation approach to selectively nucleate multiple macromolecule crystal forms, hen egg white lysozyme (HEWL) was chosen as a model. Selective phase production was achieved under conditions that, in the absence of added heteronuclei, result in crystallization of a single crystal form. Moreover, nucleation rate, which in turn affects the size and quality of HEWL crystals, was controlled by various polymer surfaces. Thus, the polymer-induced heteronucleation approach provides an additional diversity element which can be easily implemented to complement standard crystal growth techniques for the selective production of high quality protein crystals.

Crystal growth in a three-phase system: diffusion and liquid-liquid phase separation in lysozyme crystal growth

In the phase diagram of the protein hen egg-white lysozyme, a region is present in which the lysozyme solution demixes and forms two liquid phases. In situ observations by optical microscopy show that the dense liquid droplets dissolve when crystals grow in this system. During this process the demixed liquid region retracts from the crystal surface. The spatial distribution of the dense phase droplets present special boundary conditions for Fick's second law for diffusion. In combination with the cylindrical symmetry provided by the kinetically roughened crystals, this system allows for a full numerical analysis. Using experimental data for setting the boundary conditions, a quasi-steady-state solution for the time-dependent concentration profile was shown to be valid. Comparison of kinetically rough growth in a phase separated system and in a nonseparated system shows that the growth kinetics for a three-phase system differs from a two-phase system, in that crystals grow more slowly but the duration of growth is prolonged.