1
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Wang J, Liu Y, Liu T, Zhang S, Wei Z, Luo B, Cai C, Chi M, Wang S, Nie S. Dynamic Thermostable Cellulosic Triboelectric Materials from Multilevel-Non-Covalent Interactions. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2024; 20:e2307504. [PMID: 38018269 DOI: 10.1002/smll.202307504] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/28/2023] [Revised: 10/17/2023] [Indexed: 11/30/2023]
Abstract
Triboelectric materials present great potential for harvesting huge amounts of dispersed energy, and converting them directly into useful electricity, a process that generates power more sustainably. Triboelectric nanogenerators (TENGs) have emerged as a technology to power electronics and sensors, and it is expected to solve the problem of energy harvesting and self-powered sensing from extreme environments. In this paper, a high-temperature-resistant triboelectric material is designed based on multilevel non-covalent bonding interactions, which achieves an ultra-high surface charge density of 192 µC m-2 at high temperatures. TENGs based on the triboelectric material exhibit more than an order of magnitude higher power output (2750 mW m-2 at 200 °C) than the existing devices at high temperatures. These remarkable properties are achieved based on enthalpy-driven molecular assembly in highly unbonded states. Thus, the material maintains bond strength and ultra-high surface charge density in entropy-dominated high-temperature environments. This molecular design concept points out a promising direction for the preparation of polymers with excellent triboelectric properties.
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Affiliation(s)
- Jinlong Wang
- School of Light Industry and Food Engineering, Guangxi University, Nanning, 530004, P. R. China
| | - Yanhua Liu
- School of Light Industry and Food Engineering, Guangxi University, Nanning, 530004, P. R. China
| | - Tao Liu
- School of Light Industry and Food Engineering, Guangxi University, Nanning, 530004, P. R. China
| | - Song Zhang
- School of Light Industry and Food Engineering, Guangxi University, Nanning, 530004, P. R. China
| | - Zhiting Wei
- School of Light Industry and Food Engineering, Guangxi University, Nanning, 530004, P. R. China
| | - Bin Luo
- School of Light Industry and Food Engineering, Guangxi University, Nanning, 530004, P. R. China
| | - Chenchen Cai
- School of Light Industry and Food Engineering, Guangxi University, Nanning, 530004, P. R. China
| | - Mingchao Chi
- School of Light Industry and Food Engineering, Guangxi University, Nanning, 530004, P. R. China
| | - Shuangfei Wang
- School of Light Industry and Food Engineering, Guangxi University, Nanning, 530004, P. R. China
| | - Shuangxi Nie
- School of Light Industry and Food Engineering, Guangxi University, Nanning, 530004, P. R. China
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2
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Mazumder S, Zhang N. Cellulose-Hemicellulose-Lignin Interaction in the Secondary Cell Wall of Coconut Endocarp. Biomimetics (Basel) 2023; 8:biomimetics8020188. [PMID: 37218775 DOI: 10.3390/biomimetics8020188] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2023] [Revised: 04/24/2023] [Accepted: 04/26/2023] [Indexed: 05/24/2023] Open
Abstract
The coconut shell consists of three distinct layers: the skin-like outermost exocarp, the thick fibrous mesocarp, and the hard and tough inner endocarp. In this work, we focused on the endocarp because it features a unique combination of superior properties, including low weight, high strength, high hardness, and high toughness. These properties are usually mutually exclusive in synthesized composites. The microstructures of the secondary cell wall of the endocarp at the nanoscale, in which cellulose microfibrils are surrounded by hemicellulose and lignin, were generated. All-atom molecular dynamics simulations with PCFF force field were conducted to investigate the deformation and failure mechanisms under uniaxial shear and tension. Steered molecular dynamics simulations were carried out to study the interaction between different types of polymer chains. The results demonstrated that cellulose-hemicellulose and cellulose-lignin exhibit the strongest and weakest interactions, respectively. This conclusion was further validated against the DFT calculations. Additionally, through shear simulations of sandwiched polymer models, it was found that cellulose-hemicellulose-cellulose exhibits the highest strength and toughness, while cellulose-lignin-cellulose shows the lowest strength and toughness among all tested cases. This conclusion was further confirmed by uniaxial tension simulations of sandwiched polymer models. It was revealed that hydrogen bonds formed between the polymer chains are responsible for the observed strengthening and toughening behaviors. Additionally, it was interesting to note that failure mode under tension varies with the density of amorphous polymers located between cellulose bundles. The failure mode of multilayer polymer models under tension was also investigated. The findings of this work could potentially provide guidelines for the design of coconut-inspired lightweight cellular materials.
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Affiliation(s)
- Sharmi Mazumder
- Department of Mechanical Engineering, Baylor University, Waco, TX 76706, USA
| | - Ning Zhang
- Department of Mechanical Engineering, Baylor University, Waco, TX 76706, USA
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3
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Karna NK, Wohlert J, Hjorth A, Theliander H. Capillary forces exerted by a water bridge on cellulose nanocrystals: the effect of an external electric field. Phys Chem Chem Phys 2023; 25:6326-6332. [PMID: 36779301 DOI: 10.1039/d2cp05563e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
Capillary forces play an important role during the dewatering and drying of nanocellulosic materials. Traditional moisture removal techniques, such as heating, have been proved to be deterimental to the properties of these materials and hence, there is a need to develop novel dewatering techniques without affecting the desired properties of materials. It is, therefore, important to explore novel methods for dewatering these high-added-value materials without negatively influencing their properties. In this context, we explore the effect of electric field on the capillary forces developed by a liquid-water bridge between two cellulosic surfaces, which may be formed during the water removal process following its displacement from the interfibrillar spaces. All-atom molecular dynamics (MD) simulations have been used to study the influence of an externally applied electric field on the capillary force exerted by a water bridge. Our results suggest that the equilibrium contact angle of water and the capillary force exerted by the water bridge between two nanocellulosic surfaces depend on the magnitude and direction of the externally applied electric fields. Hence, an external electric field can be applied to manipulate the capillary forces between two particles. The close agreement between the capillary forces measured through MD simulations and those calculated through classical equations indicates that, within the range of the electric field applied in this study, Young-Laplace equations can be safely employed to predict the capillary forces between two particles. The present study provides insights into the use of electric fields for drying of nanocellulosic materials.
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Affiliation(s)
- Nabin Kumar Karna
- Chalmers University of Technology, Chalmersplatsen-4, Sweden. .,Wallenberg Wood Science Center, The Royal Institute of Technology, Chalmers University of Technology and Linköping University, SE-10044 Stockholm, Sweden
| | - Jakob Wohlert
- Wallenberg Wood Science Center, The Royal Institute of Technology, Chalmers University of Technology and Linköping University, SE-10044 Stockholm, Sweden.,KTH Royal Institute of Technology, Stockholm, Sweden
| | - Anna Hjorth
- Chalmers University of Technology, Chalmersplatsen-4, Sweden. .,Wallenberg Wood Science Center, The Royal Institute of Technology, Chalmers University of Technology and Linköping University, SE-10044 Stockholm, Sweden
| | - Hans Theliander
- Chalmers University of Technology, Chalmersplatsen-4, Sweden.
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4
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Liu Z, Chung PW. Critical Evaluation of Reactive Force Fields for Vibrational Spectra: Case Study of Crystalline Cellulose Iβ. PROPELLANTS EXPLOSIVES PYROTECHNICS 2022. [DOI: 10.1002/prep.202100376] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Zhiyu Liu
- Center for Engineering Concepts Development Department of Mechanical Engineering University of Maryland College Park 4298 Campus Drive, Glenn L. Martin Hall Room 2135 College Park MD, 20742 USA
| | - Peter W. Chung
- Center for Engineering Concepts Development Department of Mechanical Engineering University of Maryland College Park 4298 Campus Drive, Glenn L. Martin Hall Room 2135 College Park MD, 20742 USA
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5
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Gupta A, Khodayari A, van Duin ACT, Hirn U, Van Vuure AW, Seveno D. Cellulose Nanocrystals: Tensile Strength and Failure Mechanisms Revealed Using Reactive Molecular Dynamics. Biomacromolecules 2022; 23:2243-2254. [PMID: 35549173 DOI: 10.1021/acs.biomac.1c01110] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Cellulose nanocrystals (CNCs) offer excellent mechanical properties. However, measuring the strength by performing reliable experiments at the nanoscale is challenging. In this paper, we model Iβ crystalline cellulose using reactive molecular dynamics simulations. Taking the fibril twist into account, structural changes and hydrogen-bonding characteristics of CNCs during the tensile test are inspected and the failure mechanism of CNCs is analyzed down to the scale of individual bonds. The C4-O4 glycosidic bond is found to be responsible for the failure of CNCs. Finally, the effect of strain rate on ultimate properties is analyzed and a nonlinear model is used to predict the ultimate strength of 9.2 GPa and ultimate strain of 8.5% at a 1 s-1 strain rate. This study sheds light on the applications of cellulose in nanocomposites and further modeling of cellulose nanofibres.
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Affiliation(s)
- Aman Gupta
- Indian Institute of Science, Bangalore 560012, India
| | - Ali Khodayari
- Department of Materials Engineering, KU Leuven, Leuven 3000, Belgium
| | - Adri C T van Duin
- Department of Mechanical Engineering, The Pennsylvania State University, University Park, Pennsylvania 16802, United States.,Department of Chemical Engineering, The Pennsylvania State University, University Park, Pennsylvania 16802, United States
| | - Ulrich Hirn
- Institute of Bioproducts and Paper Technology, TU Graz, Graz 8010, Austria
| | - Aart W Van Vuure
- Department of Materials Engineering, KU Leuven, Leuven 3000, Belgium
| | - David Seveno
- Department of Materials Engineering, KU Leuven, Leuven 3000, Belgium
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6
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Egorov YA, Shandryuk GA, Vinogradov MI, Levin IS, Tavtorkin AN, Kulichikhin VG. Composite Fibers Based on Hydrated Cellulose and Poly-N-vinylpyrrolidone, Prepared from Cellulose Solutions in N-Methylmorpholine-N-Oxide. RUSS J APPL CHEM+ 2022. [DOI: 10.1134/s107042722201013x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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7
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Aoki D, Lossada F, Hoenders D, Ajiro H, Walther A. Efficient Softening and Toughening Strategies of Cellulose Nanofibril Nanocomposites Using Comb Polyurethane. Biomacromolecules 2022; 23:1693-1702. [PMID: 35362317 DOI: 10.1021/acs.biomac.1c01625] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Cellulose nanofibrils (CNFs) have attracted attention as building blocks for sustainable materials owing to their high performance and the advantages of their abundant natural resources. Bioinspired CNF/polymer nanocomposites, consisting of a soft polymer phase and a high fraction (>50 wt %) of CNF reinforcement, have been focused on excellent mechanical properties, including Young's modulus, mechanical strength, and toughness, mimicking the energy dissipation system in nature. However, efficient softening and toughening with a small amount of the soft phase is still a challenge because a large amount of the polymer phase (nearly 50%) is still required to provide ductility and toughness. Here, we describe a topological strategy in the polymer phase for efficient toughening of bioinspired CNF nanocomposites with a water-soluble comb polyurethane (PU). The comb PU provided higher elongation at break and more efficient flexibility for the nanocomposite than the linear PU, even at a small content. Moreover, CNF nanocomposites with 30 wt % of PU content and tetrabutylammonium as bulky counterions showed enhanced toughness (180% higher) and strain at break (250% higher) when compared to pure CNF due to the promotion of slippage between nanofibrils. Scanning electron microscopy (SEM) images of the fracture surface for CNF/comb PU nanocomposites displayed the pull-out of mesoscale layers and nanofibrils, supporting that the comb topology promotes the slippage between fibrils. Furthermore, the rheological study revealed that the comb PU has an entanglement plateau modulus lower than linear PU by 1 order of magnitude, related to the loosened entanglements. Our study establishes an efficient softening and toughening strategy while using small amounts of polymer phase addition, promoting interfibrillar slippage with the loosely entangled comb PU phase.
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Affiliation(s)
- Daisuke Aoki
- Graduate School of Materials Science, Nara Institute of Science and Technology, 8916-5 Takayama-cho, Ikoma, Nara 630-0192, Japan
| | - Francisco Lossada
- Department of Chemistry, A3BMS Lab-Active, Adaptive and Autonomous Bioinspired Material Systems, 55128 Mainz, Germany
| | - Daniel Hoenders
- Department of Chemistry, A3BMS Lab-Active, Adaptive and Autonomous Bioinspired Material Systems, 55128 Mainz, Germany
| | - Hiroharu Ajiro
- Graduate School of Materials Science, Nara Institute of Science and Technology, 8916-5 Takayama-cho, Ikoma, Nara 630-0192, Japan
| | - Andreas Walther
- Department of Chemistry, A3BMS Lab-Active, Adaptive and Autonomous Bioinspired Material Systems, 55128 Mainz, Germany
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8
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Padmanathan AMDD, Mushrif SH. Pyrolytic activation of cellulose: Energetics and condensed phase effects. REACT CHEM ENG 2022. [DOI: 10.1039/d1re00492a] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Bottom-up design of lignocellulose pyrolysis to optimize the quality and yield of bio-oil is hindered by the limited knowledge of the underlying condensed phase biomass chemistry. The influence of condensed...
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9
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French AD. Combining Computational Chemistry and Crystallography for a Better Understanding of the Structure of Cellulose. Adv Carbohydr Chem Biochem 2021; 80:15-93. [PMID: 34872656 DOI: 10.1016/bs.accb.2021.11.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
The approaches in this article seek to enhance understanding of cellulose at the molecular level, independent of the source and the particular crystalline form of cellulose. Four main areas of structure research are reviewed. Initially, the molecular shape is inferred from the crystal structures of many small molecules that have β-(1→4) linkages. Then, conformational analyses with potential energy calculations of cellobiose are covered, followed by the use of Atoms-In-Molecules theory to learn about interactions in experimental and theoretical structures. The last section covers models of cellulose nanoparticles. Controversies addressed include the stability of twofold screw-axis conformations, the influence of different computational methods, the predictability of crystalline conformations by studies of isolated molecules, and the twisting of model cellulose crystals.
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Affiliation(s)
- Alfred D French
- Southern Regional Research Center, U.S. Department of Agriculture, New Orleans, Louisiana, USA
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10
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Vincent S, Kandasubramanian B. Cellulose nanocrystals from agricultural resources: Extraction and functionalisation. Eur Polym J 2021. [DOI: 10.1016/j.eurpolymj.2021.110789] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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11
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Fularz A, Rice JH, Ballone P. Morphology of Nanometric Overlayers Made of Porphyrin-Type Molecules Physisorbed on Cellulose Iβ Crystals and Nanocrystals. J Phys Chem B 2021; 125:11432-11443. [PMID: 34634911 PMCID: PMC8543442 DOI: 10.1021/acs.jpcb.1c07261] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Molecular dynamics simulations based on an atomistic empirical force field have been carried out to investigate structural, thermodynamic, and dynamical properties of adlayers made of porphyrin-type molecules physisorbed on surfaces of cellulose Iβ nanocrystals. The results show that low-index surfaces provide a thermally stable, weakly perturbing support for the deposition of non-hydrogen-bonded organic molecules. At submonolayer coverage, the discoidal porphyrin molecules lay flat on the surface, forming compact 2D clusters with clear elements of ordering. The adlayer grows layer-by-layer for the smallest porphyrin species on compact cellulose surfaces, while forming 3D clusters on a first relatively ordered adlayer (Stranski-Krastanov growth) in all other cases. The adsorption energy exceeds ∼1 eV per molecule, underlying the thermal stability of the adsorbate. Entropy plays a non-negligible role, destabilizing to some extent the adlayer. The in-plane dynamics of the smallest porphyrin species, i.e., porphine, on compact surfaces shows signs of superlubricity, due to the low energy and momentum exchange between the flat admolecule and the equally flat cellulose surface.
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Affiliation(s)
- Agata Fularz
- School of Physics, University College Dublin, Dublin 4, Ireland.,Conway Institute for Biomolecular and Biomedical Research, University College Dublin, Dublin 4, Ireland
| | - James H Rice
- School of Physics, University College Dublin, Dublin 4, Ireland.,Conway Institute for Biomolecular and Biomedical Research, University College Dublin, Dublin 4, Ireland
| | - Pietro Ballone
- School of Physics, University College Dublin, Dublin 4, Ireland.,Conway Institute for Biomolecular and Biomedical Research, University College Dublin, Dublin 4, Ireland
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12
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Pakharenko V, Mukherjee S, Dias OAT, Wu C, Manion J, Singh CV, Seferos D, Tjong J, Oksman K, Sain M. Thermoconformational Behavior of Cellulose Nanofiber Films as a Device Substrate and Their Superior Flexibility and Durability to Glass. ACS APPLIED MATERIALS & INTERFACES 2021; 13:40853-40862. [PMID: 34403248 DOI: 10.1021/acsami.1c10589] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
The design and high-throughput manufacturing of thin renewable energy devices with high structural and atomic configurational stability are crucial for the fabrication of green electronics. Yet, this concept is still in its infancy. In this work, we report the extraordinary durability of thin molecular interlayered organic flexible energy devices based on chemically tuned cellulose nanofiber transparent films that outperform glass by decreasing the substrate weight by 50%. The nanofabricated flexible thin film has an exceptionally low thermal coefficient of expansion of 1.8 ppm/K and a stable atomic configuration under a harsh fabrication condition (over 190 °C for an extended period of 5 h). A flexible optoelectronic device using the same renewable cellulose nanofiber film substrate was found to be functionally operational over a life span of 5 years under an intermittent operating condition. The success of this device's stability opens up an entirely new frontier of applications of flexible electronics.
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Affiliation(s)
- Viktoriya Pakharenko
- Center for Biocomposites and Biomaterials Processing, Graduate Department of Forestry, John H. Daniels Faculty of Architecture, Landscape and Design, University of Toronto, 33 Willcocks Street, Toronto M5S3E8, Canada
| | - Sankha Mukherjee
- Department of Materials Science and Engineering, University of Toronto, 184 College Street, Toronto M5S3E4, Canada
- Department of Metallurgical and Materials Engineering, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal 721302, India
| | - Otavio Augusto Titton Dias
- Center for Biocomposites and Biomaterials Processing, Graduate Department of Forestry, John H. Daniels Faculty of Architecture, Landscape and Design, University of Toronto, 33 Willcocks Street, Toronto M5S3E8, Canada
| | - Crystal Wu
- Center for Biocomposites and Biomaterials Processing, Graduate Department of Forestry, John H. Daniels Faculty of Architecture, Landscape and Design, University of Toronto, 33 Willcocks Street, Toronto M5S3E8, Canada
| | - Joseph Manion
- Department of Chemistry, University of Toronto, 80 St. George Street, Toronto M5S3H6, Canada
| | - Chandra Veer Singh
- Department of Materials Science and Engineering, University of Toronto, 184 College Street, Toronto M5S3E4, Canada
| | - Dwight Seferos
- Department of Chemistry, University of Toronto, 80 St. George Street, Toronto M5S3H6, Canada
| | - Jimi Tjong
- Department of Mechanical and Industrial Engineering, University of Toronto, 5 King's College Road, Toronto M5S3G8, Canada
| | - Kristiina Oksman
- Department of Mechanical and Industrial Engineering, University of Toronto, 5 King's College Road, Toronto M5S3G8, Canada
- Division of Materials Science, Luleå University of Technology, Luleå 97187, Sweden
| | - Mohini Sain
- Center for Biocomposites and Biomaterials Processing, Graduate Department of Forestry, John H. Daniels Faculty of Architecture, Landscape and Design, University of Toronto, 33 Willcocks Street, Toronto M5S3E8, Canada
- Department of Mechanical and Industrial Engineering, University of Toronto, 5 King's College Road, Toronto M5S3G8, Canada
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13
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Wang Y, Kiziltas A, Drews AR, Tamrakar S, Blanchard P, Walsh TR. Dynamical Water Ingress and Dissolution at the Amorphous-Crystalline Cellulose Interface. Biomacromolecules 2021; 22:3884-3891. [PMID: 34337937 DOI: 10.1021/acs.biomac.1c00690] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The use of cellulose has considerable promise in a wide range of industrial applications but is hampered by degradation in mechanical properties due to ambient moisture uptake. Existing models of equilibrium moisture content can predict the impact of these effects, but at present, the dynamical, atomic-scale picture of water ingress into cellulose is lacking. The present work reports nonequilibrium molecular simulations of the interface between cellulose and water aimed at capturing the initial stages of two simultaneous dynamical processes, water ingress into cellulose and cellulose dissolution into water. These simulations demonstrate that the process depends on the temperature and chain length in the amorphous region, where high temperatures can induce more mass exchange and short chains can easily detach from amorphous cellulose. A cooperative mechanism that involves both chemical and physical aspects, namely, hydrogen bonding and chain intertwining, respectively, is proposed to interpret the incipient dual ingress/dissolution process. Outcomes of this work will provide a foundation for cellulose functionalization strategies to impede moisture uptake and preserve the mechanical properties of nanocellulose in applications.
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Affiliation(s)
- Yuxiang Wang
- Institute for Frontier Materials, Deakin University, Geelong, VIC 3216, Australia
| | - Alper Kiziltas
- Research and Innovation Center, Ford Motor Company, Dearborn, Michigan 48124, United States
| | - Andrew R Drews
- Research and Innovation Center, Ford Motor Company, Dearborn, Michigan 48124, United States
| | - Sandeep Tamrakar
- Research and Innovation Center, Ford Motor Company, Dearborn, Michigan 48124, United States
| | - Patrick Blanchard
- Research and Innovation Center, Ford Motor Company, Dearborn, Michigan 48124, United States
| | - Tiffany R Walsh
- Institute for Frontier Materials, Deakin University, Geelong, VIC 3216, Australia
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14
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Zhou S, Jin K, Buehler MJ. Understanding Plant Biomass via Computational Modeling. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2021; 33:e2003206. [PMID: 32945027 DOI: 10.1002/adma.202003206] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/2020] [Revised: 07/13/2020] [Indexed: 06/11/2023]
Abstract
Plant biomass, especially wood, has been used for structural materials since ancient times. It is also showing great potential for new structural materials and it is the major feedstock for the emerging biorefineries for building a sustainable society. The plant cell wall is a hierarchical matrix of mainly cellulose, hemicellulose, and lignin. Herein, the structure, properties, and reactions of cellulose, lignin, and wood cell walls, studied using density functional theory (DFT) and molecular dynamics (MD), which are the widely used computational modeling approaches, are reviewed. Computational modeling, which has played a crucial role in understanding the structure and properties of plant biomass and its nanomaterials, may serve a leading role on developing new hierarchical materials from biomass in the future.
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Affiliation(s)
- Shengfei Zhou
- Laboratory for Atomistic and Molecular Mechanics, Department of Civil and Environmental Engineering, Massachusetts Institute of Technology, 77 Mass. Ave 1-290, Cambridge, MA, 02139, USA
| | - Kai Jin
- Laboratory for Atomistic and Molecular Mechanics, Department of Civil and Environmental Engineering, Massachusetts Institute of Technology, 77 Mass. Ave 1-290, Cambridge, MA, 02139, USA
| | - Markus J Buehler
- Laboratory for Atomistic and Molecular Mechanics, Department of Civil and Environmental Engineering, Massachusetts Institute of Technology, 77 Mass. Ave 1-290, Cambridge, MA, 02139, USA
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15
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Wei Y, Han W, Li G, Liang X, Gu Z, Hu K. Aging Characteristics of Transformer Oil-Impregnated Insulation Paper Based on Trap Parameters. Polymers (Basel) 2021; 13:polym13091364. [PMID: 33921999 PMCID: PMC8122526 DOI: 10.3390/polym13091364] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2021] [Revised: 04/12/2021] [Accepted: 04/13/2021] [Indexed: 11/29/2022] Open
Abstract
Oil-impregnated insulation paper is an important part of transformers; its performance seriously affects the life of power equipment. It is of significance to study the aging characteristics and mechanism of oil-impregnated insulation paper under thermal stress for transformer status detection and evaluation. In the work, the accelerated thermal aging was carried out at 120 °C, and DP1490, DP787, and DP311 samples were selected to represent the new, mid-aging, and late-aging status of the transformer, respectively. The space charge distribution within the specimens was measured by the pulsed electro-acoustic (PEA) method and the trap parameters were extracted based on the measurement curves. Further, the aging mechanism was studied by molecular simulation technology. A typical molecular chain defect model was constructed to study the motion of cellulose molecules under thermal stress. The experimental results show that the corresponding trap energy levels are 0.54 eV, 0.73 eV, and 0.92 eV for the new specimen, the mid-aging specimen, and the late aging specimen, respectively. The simulation results show that the trapped energy at the beginning of aging is mainly determined by the loss of H atoms. The changes in trap energy in the middle stage of aging are mainly caused by the absence of some C atoms, and the trap energy level at the end of aging is mainly caused by the breakage of chemical bonds. This study is of great significance to reveal the aging mechanism of oil-impregnated insulation paper and the modification of insulation paper.
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16
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Yang L, Du DY, Zhang JW, Tang C. A comparative simulation: Difference between chemical grafting and physical doping of cellulose by using polysilsesquioxane. CHINESE J CHEM PHYS 2021. [DOI: 10.1063/1674-0068/cjcp2004058] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
Affiliation(s)
- Lu Yang
- College of Engineering and Technology, Southwest University, Chongqing 400715, China
| | - Dong-yuan Du
- College of Engineering and Technology, Southwest University, Chongqing 400715, China
| | - Jing-wen Zhang
- College of Engineering and Technology, Southwest University, Chongqing 400715, China
| | - Chao Tang
- College of Engineering and Technology, Southwest University, Chongqing 400715, China
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17
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Chanka N, Mondach W, Dittanet P, Roddecha S, Niamnuy C, Prapainainar P, Seubsai A. Modification of pineapple leaf fibers with aminosilanes as adsorbents for H 2S removal. CHEMOSPHERE 2021; 266:129000. [PMID: 33246698 DOI: 10.1016/j.chemosphere.2020.129000] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2020] [Revised: 11/10/2020] [Accepted: 11/13/2020] [Indexed: 06/11/2023]
Abstract
Pineapple leaves were used as a natural fiber source to prepare various modified microcrystalline cellulose (MCC) samples as sorbents for H2S sorption. Pineapple leaf fibers were first extracted from pineapple leaves, followed by hydrolyzing to produce MCC before various modifications using primary amine (3-aminopropyltrimethoxysilane, APS), secondary amine (N-methyl-3-aminopropyltrimethoxysilane, MAPS), or tertiary amine (N,N-dimethyl-3-aminopropyltrimethoxysilane, DAPS). The characterization results proved that all the aminosilane groups were successfully grafted onto the MCC. In addition, the thermal stability and the porosity of the modified sorbents were enhanced relative to those of unmodified MCC. The H2S sorption studies of MCC modified with APS, MAPS, and DAPS at 0, 3, or 5%w/w showed that MCC-MAPS had better H2S sorption performance than MCC-APS and MCC-DAPS, respectively, when comparing the H2S sorption performance at the same loading level. The optimum H2S sorption performance of each aminosilane group was achieved from MCC-APS at 5%, MCC-MAPS at 3%, and MCC-DAPS at 5%. An additional study of H2S sorption of these three sorbents in the presence of CO2 showed that MCC-DAPS at 5% was the best sorbent for selective H2S removal. Our results indicated that MCC modified with the aminosilane groups, especially MAPS, were promising materials for H2S sorption, with potential application in gas separation.
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Affiliation(s)
- Napassorn Chanka
- Department of Chemical Engineering, Faculty of Engineering, Kasetsart University, Bangkok, 10900, Thailand; Center of Excellence on Petrochemical and Materials Technology, Kasetsart University, Bangkok, 10900, Thailand
| | - Wongsaphat Mondach
- Department of Chemical Engineering, Faculty of Engineering, Kasetsart University, Bangkok, 10900, Thailand; Research Network of NANOTEC-KU on NanoCatalysts and NanoMaterials for Sustainable Energy and Environment, Kasetsart University, Bangkok, 10900, Thailand
| | - Peerapan Dittanet
- Department of Chemical Engineering, Faculty of Engineering, Kasetsart University, Bangkok, 10900, Thailand
| | - Supacharee Roddecha
- Department of Chemical Engineering, Faculty of Engineering, Kasetsart University, Bangkok, 10900, Thailand
| | - Chalida Niamnuy
- Department of Chemical Engineering, Faculty of Engineering, Kasetsart University, Bangkok, 10900, Thailand; Center of Excellence on Petrochemical and Materials Technology, Kasetsart University, Bangkok, 10900, Thailand; Research Network of NANOTEC-KU on NanoCatalysts and NanoMaterials for Sustainable Energy and Environment, Kasetsart University, Bangkok, 10900, Thailand
| | - Paweena Prapainainar
- Department of Chemical Engineering, Faculty of Engineering, Kasetsart University, Bangkok, 10900, Thailand
| | - Anusorn Seubsai
- Department of Chemical Engineering, Faculty of Engineering, Kasetsart University, Bangkok, 10900, Thailand; Center of Excellence on Petrochemical and Materials Technology, Kasetsart University, Bangkok, 10900, Thailand; Research Network of NANOTEC-KU on NanoCatalysts and NanoMaterials for Sustainable Energy and Environment, Kasetsart University, Bangkok, 10900, Thailand.
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18
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Karna NK, Wohlert J, Lidén A, Mattsson T, Theliander H. Wettability of cellulose surfaces under the influence of an external electric field. J Colloid Interface Sci 2021; 589:347-355. [PMID: 33476890 DOI: 10.1016/j.jcis.2021.01.003] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2020] [Revised: 12/12/2020] [Accepted: 01/01/2021] [Indexed: 11/15/2022]
Abstract
HYPOTHESIS Interfacial tensions play an important role in dewatering of hydrophilic materials like nanofibrillated cellulose, and are affected by the molecular organization of water at the interface. Application of an electric field influences the orientation of water molecules along the field direction. Hence, it should be possible to alter the interfacial free energies to tune the wettability of cellulose surface through application of an external electric field thus, aiding the dewatering process. SIMULATIONS Molecular dynamics simulations of cellulose surface in contact with water under the influence of an external electric field have been conducted with GLYCAM-06 forcefield. The effect of variation in electric field intensity and directions on the spreading coefficient has been addressed via orientational preference of water molecules and interfacial free energy analyses. FINDINGS The application of electric field influences the interfacial free energy difference at the cellulose-water interface. The spreading coefficient increases with the electric field directed parallel to the cellulose-water interface while it decreases in the perpendicular electric field. Variation in interfacial free energies seems to explain the change in contact angle adequately in presence of an electric field. The wettability of cellulose surface can be tuned by the application of an external electric field.
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Affiliation(s)
- Nabin Kumar Karna
- Division of Forest Products and Chemical Engineering, Department of Chemistry and Chemical Engineering, Chalmers University of Technology, Kemigården 4, 412 96 Göteborg, Sweden; Wallenberg Wood Science Center, KTH Royal Institute of Technology, SE-10044, Sweden.
| | - Jakob Wohlert
- Wallenberg Wood Science Center, KTH Royal Institute of Technology, SE-10044, Sweden; Department of Fibre and Polymer Technology, KTH Royal Institute of Technology, SE-10044, Sweden.
| | - Anna Lidén
- Division of Forest Products and Chemical Engineering, Department of Chemistry and Chemical Engineering, Chalmers University of Technology, Kemigården 4, 412 96 Göteborg, Sweden.
| | - Tuve Mattsson
- Division of Forest Products and Chemical Engineering, Department of Chemistry and Chemical Engineering, Chalmers University of Technology, Kemigården 4, 412 96 Göteborg, Sweden; Wallenberg Wood Science Center, KTH Royal Institute of Technology, SE-10044, Sweden.
| | - Hans Theliander
- Division of Forest Products and Chemical Engineering, Department of Chemistry and Chemical Engineering, Chalmers University of Technology, Kemigården 4, 412 96 Göteborg, Sweden; Wallenberg Wood Science Center, KTH Royal Institute of Technology, SE-10044, Sweden.
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19
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Bregado JL, Tavares FW, Secchi AR, Segtovich ISV. Thermophysical Properties of Amorphous‐Paracrystalline Celluloses by Molecular Dynamics. MACROMOL THEOR SIMUL 2020. [DOI: 10.1002/mats.202000007] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Jurgen Lange Bregado
- Programa de Engenharia Química/COPPEUniversidade Federal do Rio de JaneiroCidade Universitária Rio de Janeiro CP 21941‐914 Brazil
| | - Frederico Wanderley Tavares
- Programa de Engenharia Química/COPPEUniversidade Federal do Rio de JaneiroCidade Universitária Rio de Janeiro CP 21941‐914 Brazil
- Escola de QuímicaDepartamento de Engenharia QuímicaUniversidade Federal do Rio de JaneiroCidade Universitária Rio de Janeiro CP 21941‐972 Brazil
| | - Argimiro Resende Secchi
- Programa de Engenharia Química/COPPEUniversidade Federal do Rio de JaneiroCidade Universitária Rio de Janeiro CP 21941‐914 Brazil
- Escola de QuímicaDepartamento de Engenharia QuímicaUniversidade Federal do Rio de JaneiroCidade Universitária Rio de Janeiro CP 21941‐972 Brazil
| | - Iuri Soter Viana Segtovich
- Programa de Engenharia Química/COPPEUniversidade Federal do Rio de JaneiroCidade Universitária Rio de Janeiro CP 21941‐914 Brazil
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20
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Ferreras Moreno M, Stinson CJ, Shepherd RG, Welsh ID, Altaner C, Crittenden DL. Temperature-Dependent Blue Shifting of O-H Stretching Frequencies in Crystalline Cellulose Explained. J Phys Chem B 2020; 124:4924-4930. [PMID: 32441522 DOI: 10.1021/acs.jpcb.0c02793] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Increasing the temperature of a chemical system generally causes covalent bonds to lengthen and weaken, often the first step in initiating chemical reactions. However, for some hydrogen-bonded systems, infrared (IR) spectroscopy measurements reveal that covalent O-H bonds actually strengthen and therefore shorten when heated. In 1957, Finch and Lippincott proposed a simple one-dimensional (1D) model to explain this effect, in which thermal excitation of intermolecular stretching modes leads to lengthening and weakening of intermolecular O-H···O hydrogen bonds, thereby indirectly strengthening the associated covalent O-H bonds. Taking cellulose (an infinitely repeating polymer of d-glucose) as an example, we use molecular dynamics modeling to show that the same mechanism is responsible for temperature-dependent blue shifting of O-H stretching bands in IR spectra of carbohydrate biopolymers, except that interchain hydrogen bonds are weakened by thermal excitation of chain-separation modes, while intrachain hydrogen bonds are weakened by thermally induced changes in ring puckering and orientation of ring substituents but not reorientation of glucose units relative to one another or overall twisting of the cellulose chains.
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Affiliation(s)
- Manuel Ferreras Moreno
- School of Physical and Chemical Sciences, University of Canterbury, Christchurch 8041, New Zealand
| | - Chris J Stinson
- School of Physical and Chemical Sciences, University of Canterbury, Christchurch 8041, New Zealand
| | - Ross G Shepherd
- School of Physical and Chemical Sciences, University of Canterbury, Christchurch 8041, New Zealand
| | - Ivan D Welsh
- School of Physical and Chemical Sciences, University of Canterbury, Christchurch 8041, New Zealand
| | - Clemens Altaner
- New Zealand School of Forestry, University of Canterbury, Christchurch 8041, New Zealand
| | - Deborah L Crittenden
- School of Physical and Chemical Sciences, University of Canterbury, Christchurch 8041, New Zealand
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21
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Wu Z, Beltran-Villegas DJ, Jayaraman A. Development of a New Coarse-Grained Model to Simulate Assembly of Cellulose Chains Due to Hydrogen Bonding. J Chem Theory Comput 2020; 16:4599-4614. [DOI: 10.1021/acs.jctc.0c00225] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Affiliation(s)
- Zijie Wu
- Department of Chemical and Biomolecular Engineering, University of Delaware, 150 Academy
St., Newark, Delaware 19716, United States
| | - Daniel J. Beltran-Villegas
- Department of Chemical and Biomolecular Engineering, University of Delaware, 150 Academy
St., Newark, Delaware 19716, United States
| | - Arthi Jayaraman
- Department of Chemical and Biomolecular Engineering, University of Delaware, 150 Academy
St., Newark, Delaware 19716, United States
- Department of Materials Science and Engineering, University of Delaware, 201 DuPont Hall, Newark, Delaware 19716, United States
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22
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Tensile behaviour of dislocated/crystalline cellulose fibrils at the nano scale. Carbohydr Polym 2020; 235:115946. [PMID: 32122482 DOI: 10.1016/j.carbpol.2020.115946] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2019] [Revised: 01/31/2020] [Accepted: 02/02/2020] [Indexed: 11/23/2022]
Abstract
Atomistic modelling of cellulose has widely been investigated for years using molecular dynamics simulations. In this paper, we model Iβ crystalline cellulose as well as develop a model including dislocations in between the crystal regions. The model including dislocations shows a tensile modulus of 109 GPa, 25% lower than that of the fully crystalline model (146 GPa). The change in dihedral angle preferences is analysed, and its effect on hydrogen bonding pattern is assessed. How presence of hydrogen bonds contributes to elastic properties of cellulose nano-fibrils is shown. Effect of water on the elastic modulus of fibrils is also investigated. Moreover, an illustration is given of how the tensile behaviour of fibrils is controlled by a synergy between the geometry changes occurring at the glycosidic linkage, reflected by specific torsional and glycosidic angles. These findings can be useful in further modelling of cellulosic fibrils at the atomistic and coarse-grained scales.
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23
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Muthoka RM, Kim HC, Kim JW, Zhai L, Panicker PS, Kim J. Steered Pull Simulation to Determine Nanomechanical Properties of Cellulose Nanofiber. MATERIALS 2020; 13:ma13030710. [PMID: 32033273 PMCID: PMC7041381 DOI: 10.3390/ma13030710] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/08/2019] [Revised: 01/21/2020] [Accepted: 02/01/2020] [Indexed: 11/16/2022]
Abstract
Cellulose nanofiber (CNF) exhibits excellent mechanical properties, which has been extensively proven through experimental techniques. However, understanding the mechanisms and the inherent structural behavior of cellulose is important in its vastly growing research areas of applications. This study focuses on taking a look into what happens to the atomic molecular interactions of CNF, mainly hydrogen bond, in the presence of external force. This paper investigates the hydrogen bond disparity within CNF structure. To achieve this, molecular dynamics simulations of cellulose Iβ nanofibers are carried out in equilibrated conditions in water using GROMACS software in conjunction with OPLS-AA force field. It is noted that the hydrogen bonds within the CNF are disrupted when a pulling force is applied. The simulated Young’s modulus of CNF is found to be 161 GPa. A simulated shear within the cellulose chains presents a trend with more hydrogen bond disruptions at higher forces.
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24
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Ren Z, Guo R, Bi H, Jia X, Xu M, Cai L. Interfacial Adhesion of Polylactic Acid on Cellulose Surface: A Molecular Dynamics Study. ACS APPLIED MATERIALS & INTERFACES 2020; 12:3236-3244. [PMID: 31869208 DOI: 10.1021/acsami.9b20101] [Citation(s) in RCA: 33] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Interfacial bonding and adhesion mechanisms are important in determining the final properties of the polymer composite. Molecular dynamics (MD) simulations have been used to characterize the interfacial structure and adhesion behavior of crystalline cellulose planes in contact with polylactic acid. The structure of the PLA at the interface exhibits a shape that can accommodate the structure of the cellulose surface. The adhesion between the PLA and the cellulose surface is affected by the polarity of the functional groups and the surface roughness. The improved adhesion is primarily due to hydrogen bonds formed between the cellulose and PLA molecular chains. Cellulose planes with higher molecular protrusions and greater surface roughness produce stronger adhesion to PLA due to enhanced hydrogen bonding. This study provides a basic insight into the interfacial mechanisms of PLA and cellulose surfaces at the molecular level.
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Affiliation(s)
- Zechun Ren
- Key Laboratory of Bio-Based Material Science and Technology (Ministry of Education) , Northeast Forestry University , Harbin 150040 , China
| | - Rui Guo
- Key Laboratory of Bio-Based Material Science and Technology (Ministry of Education) , Northeast Forestry University , Harbin 150040 , China
| | - Hongjie Bi
- Key Laboratory of Bio-Based Material Science and Technology (Ministry of Education) , Northeast Forestry University , Harbin 150040 , China
| | - Xin Jia
- Key Laboratory of Bio-Based Material Science and Technology (Ministry of Education) , Northeast Forestry University , Harbin 150040 , China
| | - Min Xu
- Key Laboratory of Bio-Based Material Science and Technology (Ministry of Education) , Northeast Forestry University , Harbin 150040 , China
| | - Liping Cai
- Mechanical and Energy Engineer Department , University of North Texas , Demon , Texas 76201 , United States
- College of Materials Science and Engineering , Nanjing Forestry University , Nanjing 210037 , China
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25
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Zhai C, Li T, Shi H, Yeo J. Discovery and design of soft polymeric bio-inspired materials with multiscale simulations and artificial intelligence. J Mater Chem B 2020; 8:6562-6587. [DOI: 10.1039/d0tb00896f] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Establishing the “Materials 4.0” paradigm requires intimate knowledge of the virtual space in materials design.
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Affiliation(s)
- Chenxi Zhai
- J2 Lab for Engineering Living Materials
- Sibley School of Mechanical and Aerospace Engineering
- Cornell University
- Ithaca
- USA
| | - Tianjiao Li
- J2 Lab for Engineering Living Materials
- Sibley School of Mechanical and Aerospace Engineering
- Cornell University
- Ithaca
- USA
| | - Haoyuan Shi
- J2 Lab for Engineering Living Materials
- Sibley School of Mechanical and Aerospace Engineering
- Cornell University
- Ithaca
- USA
| | - Jingjie Yeo
- J2 Lab for Engineering Living Materials
- Sibley School of Mechanical and Aerospace Engineering
- Cornell University
- Ithaca
- USA
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26
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Jiang X, Chen Y, Yuan Y, Zheng L. Thermal Response in Cellulose I β Based on Molecular Dynamics. COMPUTATIONAL AND MATHEMATICAL BIOPHYSICS 2019. [DOI: 10.1515/cmb-2019-0007] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
Abstract
The structural details of cellulose I β were discussed according to molecular dynamics simulations with the GLYCAM-06 force field. The simulation outcomes were in agreement with previous experimental data, including structural parameters and hydrogen bond pattern at 298 K. We found a new conformation of cellulose Iβ existed at the intermediate temperature that is between the low and high temperatures. Partial chain rotations along the backbone direction were found and conformations of hydroxymethyl groups that alternated from tg to either gt or gg were observed when the temperature increased from 298 K to 400 K. In addition, the gg conformation is preferred than gt. For the structure adopted at high temperature of 500 K, major chains were twisted and two chains detached from each plain. In contrast to the observation under intermediate temperature, the population of hydroxymethyl groups in gt exceeded that in gg conformation at high temperature. In addition, three patterns of hydrogen bonding were identified at low, intermediate and high temperatures in the simulations. The provided structural information indicated the transitions occurred around 350 K and 450 K, considered as the transitional temperatures of cellulose Iβ in this work.
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Affiliation(s)
- Xuewei Jiang
- Wuhan Textile and Apparel Digital Engineering Technology Research Center , Wuhan Textile University , Wuhan 430073 , Hubei, China ; Hubei Key Laboratory of Biomass Fibers and Eco-dyeing & Finishing , Wuhan Textile University , Wuhan 430073 , China
| | - Yu Chen
- Wuhan Textile and Apparel Digital Engineering Technology Research Center , Wuhan Textile University , Wuhan 430073 , Hubei, China
| | - Yue Yuan
- Department of Textile Engineering, Chemistry and Science , North Carolina State University , USA 27067
| | - Lu Zheng
- Wuhan Textile and Apparel Digital Engineering Technology Research Center , Wuhan Textile University , Wuhan 430073 , Hubei, China
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27
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Tanaka R, Kashiwagi Y, Okada Y, Inoue T. Viscoelastic Relaxation of Cellulose Nanocrystals in Fluids: Contributions of Microscopic Internal Motions to Flexibility. Biomacromolecules 2019; 21:408-417. [DOI: 10.1021/acs.biomac.9b00943] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
- Reina Tanaka
- Department of Macromolecular Science, Graduate School of Science, Osaka University, 1-1 Machikaneyama-cho, Toyonaka, Osaka 560-0043, Japan
- Forestry and Forest Products Research Institute, Forest Research and Management Organization, 1 Matsunosato, Tsukuba, Ibaraki 305-8687, Japan
| | - Yu Kashiwagi
- Department of Macromolecular Science, Graduate School of Science, Osaka University, 1-1 Machikaneyama-cho, Toyonaka, Osaka 560-0043, Japan
| | - Yuki Okada
- Department of Macromolecular Science, Graduate School of Science, Osaka University, 1-1 Machikaneyama-cho, Toyonaka, Osaka 560-0043, Japan
| | - Tadashi Inoue
- Department of Macromolecular Science, Graduate School of Science, Osaka University, 1-1 Machikaneyama-cho, Toyonaka, Osaka 560-0043, Japan
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28
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Wood–Moisture Relationships Studied with Molecular Simulations: Methodological Guidelines. FORESTS 2019. [DOI: 10.3390/f10080628] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
This paper aims at providing a methodological framework for investigating wood polymers using atomistic modeling, namely, molecular dynamics (MD) and grand canonical Monte Carlo (GCMC) simulations. Atomistic simulations are used to mimic water adsorption and desorption in amorphous polymers, make observations on swelling, mechanical softening, and on hysteresis. This hygromechanical behavior, as observed in particular from the breaking and reforming of hydrogen bonds, is related to the behavior of more complex polymeric composites. Wood is a hierarchical material, where the origin of wood-moisture relationships lies at the nanoporous material scale. As water molecules are adsorbed into the hydrophilic matrix in the cell walls, the induced fluid–solid interaction forces result in swelling of these cell walls. The interaction of the composite polymeric material, that is the layer S2 of the wood cell wall, with water is known to rearrange its internal material structure, which makes it moisture sensitive, influencing its physical properties. In-depth studies of the coupled effects of water sorption on hygric and mechanical properties of different polymeric components can be performed with atomistic modeling. The paper covers the main components of knowledge and good practice for such simulations.
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29
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Molecular insight into the wetting behavior and amphiphilic character of cellulose nanocrystals. Adv Colloid Interface Sci 2019; 267:15-25. [PMID: 30884357 DOI: 10.1016/j.cis.2019.02.003] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2018] [Revised: 02/27/2019] [Accepted: 02/27/2019] [Indexed: 02/05/2023]
Abstract
The study of nanocellulose is a field of growing interest due to its many applications and its use in the development of biocompatible and eco-friendly materials. In spite of the vast number of studies in the field, many questions about the role of the molecular structure in the properties of cellulose are still subject of debate. One of these fundamental questions is the possible amphiphilic nature of cellulose and the relative role of hydrogen bonding and hydrophobic effect on the interactions of cellulose. In this work we present an extensive molecular dynamics simulation study of this question by analyzing the wetting of cellulose with water and organic solvent, its interaction with hydrophilic and hydrophobic ions and its interaction with a protein (human epidermal growth factor, hEGF). We consider two characteristic cellulose crystal planes of Iβ cellulose with very different roughness, different hydrogen bonding capability and different exposure of cellulose hydrophobic groups (the (010) plane which has exposed -OH groups and the (100) plane with buried -OH groups). Our results show that both surfaces are simultaneously hydrophilic and lipophilic, with both surfaces having very similar contact angles. In spite of the global similarity of wetting of both surfaces, the molecular details of wetting are very different and substantial local wetting heterogeneities (which strongly depend on the surface) appear for both solvents. We also observe a weak interaction of both surfaces with hydrophobic and hydrophilic solutes. These weak interactions are attributed to the simultaneous lipophilic and hydrophilic character of both (100) and (010) cellulose surfaces. Interestingly, we found a substantial interaction of both cellulose planes with polar and apolar residues of the hEGF protein.
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30
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Stalker MR, Grant J, Yong CW, Ohene-Yeboah LA, Mays TJ, Parker SC. Molecular simulation of hydrogen storage and transport in cellulose. MOLECULAR SIMULATION 2019. [DOI: 10.1080/08927022.2019.1593975] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- M. R. Stalker
- Centre for Sustainable Chemical Technologies, University of Bath, Bath, UK
- Department of Chemistry, University of Bath, Bath, UK
| | - J. Grant
- Department of Chemistry, University of Bath, Bath, UK
- Computing Services, University of Bath, Bath, UK
| | - C. W. Yong
- Scientific Computing Department, STFC Daresbury Laboratory, Daresbury, UK
| | - L. A. Ohene-Yeboah
- Centre for Sustainable Chemical Technologies, University of Bath, Bath, UK
- Department of Chemistry, University of Bath, Bath, UK
| | - T. J. Mays
- Department of Chemical Engineering, University of Bath, Bath, UK
| | - S. C. Parker
- Department of Chemistry, University of Bath, Bath, UK
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31
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Affiliation(s)
- Yi-Chen Ethan Li
- Department of Chemical Engineering, Feng Chia University, 40724 Taichung, Taiwan
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32
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Manna B, Ghosh A. Dissolution of cellulose in ionic liquid and water mixtures as revealed by molecular dynamics simulations. J Biomol Struct Dyn 2019; 37:3987-4005. [PMID: 30319053 DOI: 10.1080/07391102.2018.1533496] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
Affiliation(s)
- Bharat Manna
- School of Energy Science and Engineering, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal, India
| | - Amit Ghosh
- School of Energy Science and Engineering, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal, India
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33
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Lossada F, Guo J, Jiao D, Groeer S, Bourgeat-Lami E, Montarnal D, Walther A. Vitrimer Chemistry Meets Cellulose Nanofibrils: Bioinspired Nanopapers with High Water Resistance and Strong Adhesion. Biomacromolecules 2018; 20:1045-1055. [DOI: 10.1021/acs.biomac.8b01659] [Citation(s) in RCA: 60] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Francisco Lossada
- Freiburg Center for Interactive Materials and Bioinspired Technologies, University of Freiburg, Georges-Köhler-Allee 105, Freiburg 79110, Germany
| | - Jiaqi Guo
- Freiburg Center for Interactive Materials and Bioinspired Technologies, University of Freiburg, Georges-Köhler-Allee 105, Freiburg 79110, Germany
| | - Dejin Jiao
- Freiburg Center for Interactive Materials and Bioinspired Technologies, University of Freiburg, Georges-Köhler-Allee 105, Freiburg 79110, Germany
| | - Saskia Groeer
- Freiburg Center for Interactive Materials and Bioinspired Technologies, University of Freiburg, Georges-Köhler-Allee 105, Freiburg 79110, Germany
| | - Elodie Bourgeat-Lami
- Univ Lyon. Université Claude Bernard Lyon 1, CPE Lyon,
CNRS, UMR 5265, Chemistry, Catalysis, Polymers and Processes, 43 Bvd du 11 Novembre 1918, F-69616 Villeurbanne, France
| | - Damien Montarnal
- Univ Lyon. Université Claude Bernard Lyon 1, CPE Lyon,
CNRS, UMR 5265, Chemistry, Catalysis, Polymers and Processes, 43 Bvd du 11 Novembre 1918, F-69616 Villeurbanne, France
| | - Andreas Walther
- Freiburg Center for Interactive Materials and Bioinspired Technologies, University of Freiburg, Georges-Köhler-Allee 105, Freiburg 79110, Germany
- Freiburg Institute for Advanced Studies, University of Freiburg, Freiburg 79104, Germany
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34
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Ling S, Chen W, Fan Y, Zheng K, Jin K, Yu H, Buehler MJ, Kaplan DL. Biopolymer nanofibrils: structure, modeling, preparation, and applications. Prog Polym Sci 2018; 85:1-56. [PMID: 31915410 PMCID: PMC6948189 DOI: 10.1016/j.progpolymsci.2018.06.004] [Citation(s) in RCA: 168] [Impact Index Per Article: 28.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Biopolymer nanofibrils exhibit exceptional mechanical properties with a unique combination of strength and toughness, while also presenting biological functions that interact with the surrounding environment. These features of biopolymer nanofibrils profit from their hierarchical structures that spun angstrom to hundreds of nanometer scales. To maintain these unique structural features and to directly utilize these natural supramolecular assemblies, a variety of new methods have been developed to produce biopolymer nanofibrils. In particular, cellulose nanofibrils (CNFs), chitin nanofibrils (ChNFs), silk nanofibrils (SNFs) and collagen nanofibrils (CoNFs), as the four most abundant biopolymer nanofibrils on earth, have been the focus of research in recent years due to their renewable features, wide availability, low-cost, biocompatibility, and biodegradability. A series of top-down and bottom-up strategies have been accessed to exfoliate and regenerate these nanofibrils for versatile advanced applications. In this review, we first summarize the structures of biopolymer nanofibrils in nature and outline their related computational models with the aim of disclosing fundamental structure-property relationships in biological materials. Then, we discuss the underlying methods used for the preparation of CNFs, ChNFs, SNF and CoNFs, and discuss emerging applications for these biopolymer nanofibrils.
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Affiliation(s)
- Shengjie Ling
- School of Physical Science and Technology, ShanghaiTech University, Shanghai, 201210, China
- Department of Civil and Environmental Engineering, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA
- Department of Biomedical Engineering, Tufts University, Medford, MA, 02155, USA
| | - Wenshuai Chen
- Key Laboratory of Bio-based Material Science & Technology, Ministry of Education, Northeast Forestry University, Harbin, China
| | - Yimin Fan
- College of Chemical Engineering, Nanjing Forestry University, Nanjing, China
| | - Ke Zheng
- School of Physical Science and Technology, ShanghaiTech University, Shanghai, 201210, China
| | - Kai Jin
- Department of Civil and Environmental Engineering, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA
| | - Haipeng Yu
- Key Laboratory of Bio-based Material Science & Technology, Ministry of Education, Northeast Forestry University, Harbin, China
| | - Markus J. Buehler
- Department of Civil and Environmental Engineering, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA
| | - David L. Kaplan
- Department of Biomedical Engineering, Tufts University, Medford, MA, 02155, USA
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Optimization of Ionic Liquid Pretreatment of Mixed Softwood by Response Surface Methodology and Reutilization of Ionic Liquid from Hydrolysate. BIOTECHNOL BIOPROC E 2018. [DOI: 10.1007/s12257-017-0209-x] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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36
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Bogdanova OI, Chvalun SN. Polysaccharide-based natural and synthetic nanocomposites. POLYMER SCIENCE SERIES A 2018. [DOI: 10.1134/s0965545x16050047] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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37
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Watermann T, Sebastiani D. Liquid Water Confined in Cellulose with Variable Interfacial Hydrophilicity. ACTA ACUST UNITED AC 2017. [DOI: 10.1515/zpch-2017-1011] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Abstract
We investigate liquid water confined within nanoscale cellulose slabs by means of molecular dynamics simulations. Depending on the construction of the cellulose–water interface, two different surface structures with distinct levels of hydrophilicity are exposed to the water. The different philicities are reflected in the response of the water phase to this geometric confinement, both in terms of the density profile and in the strength of the aqueous hydrogen bonding network. At the smooth surface cut along the (010) axis of the cellulose crystal, water shows typical properties of a hydrophilic confinement: the density shows fluctuations that disappear further away from the wall, the water molecules orient themselves and the coordination numbers increases at the interface. As a consequence, the water becomes “harder” at the interface, with a considerably increased local ordering. At the zigzag-shaped surface along the (111) axis, the degree of hydrophilicity is reduced, and only small effects can be seen: the density shows weak fluctuations, and the orientation of the water molecules is closer to that of bulk water than to the smooth surface. The local coordination numbers remains constant over the whole confinement. Our work shows that the nature of the exposed cellulose interface has a strong influence on how the structure of adjacent water is modified. The different ways of surface construction yield distinct degrees of hydrophilicity and spatial accessibility regarding the hydrogen bond network, resulting in a notably different interfacial water structure.
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Affiliation(s)
- Tobias Watermann
- Institute of Chemistry , Martin-Luther University Halle-Wittenberg , 06120 Halle , Germany
| | - Daniel Sebastiani
- Institute of Chemistry , Martin-Luther University Halle-Wittenberg , von-Danckelmann-Platz 4 , 06120 Halle , Germany
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38
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Martínez-Sanz M, Pettolino F, Flanagan B, Gidley MJ, Gilbert EP. Structure of cellulose microfibrils in mature cotton fibres. Carbohydr Polym 2017; 175:450-463. [DOI: 10.1016/j.carbpol.2017.07.090] [Citation(s) in RCA: 44] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2017] [Revised: 07/19/2017] [Accepted: 07/30/2017] [Indexed: 12/16/2022]
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39
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Prakash Menon M, Selvakumar R, Suresh kumar P, Ramakrishna S. Extraction and modification of cellulose nanofibers derived from biomass for environmental application. RSC Adv 2017. [DOI: 10.1039/c7ra06713e] [Citation(s) in RCA: 101] [Impact Index Per Article: 14.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022] Open
Abstract
Cellulose nanofibers obtained from various plants and microbial sources, their extraction methods and various environmental applications are discussed.
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Affiliation(s)
| | - R. Selvakumar
- Nanobiotechnology Laboratory
- PSG Institute of Advanced Studies
- Coimbatore
- India-641004
| | - Palaniswamy Suresh kumar
- Environmental & Water Technology Centre of Innovation (EWTCOI)
- Ngee Ann Polytechnic
- Singapore-599489
| | - Seeram Ramakrishna
- Center for Nanofibers and Nanotechnology
- Department of Mechanical Engineering
- National University of Singapore
- Singapore 117576
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40
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Murillo JD, Biernacki JJ, Northrup S, Mohammad AS. BIOMASS PYROLYSIS KINETICS: A REVIEW OF MOLECULAR-SCALE MODELING CONTRIBUTIONS. BRAZILIAN JOURNAL OF CHEMICAL ENGINEERING 2017. [DOI: 10.1590/0104-6632.20170341s20160086] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- J. D. Murillo
- Tennessee Technological University, USA; Tennessee Technological University, USA
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41
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Lindh EL, Bergenstråhle-Wohlert M, Terenzi C, Salmén L, Furó I. Non-exchanging hydroxyl groups on the surface of cellulose fibrils: The role of interaction with water. Carbohydr Res 2016; 434:136-142. [DOI: 10.1016/j.carres.2016.09.006] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2016] [Revised: 09/06/2016] [Accepted: 09/07/2016] [Indexed: 10/21/2022]
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42
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Martoïa F, Dumont PJJ, Orgéas L, Belgacem MN, Putaux JL. On the origins of the elasticity of cellulose nanofiber nanocomposites and nanopapers: a micromechanical approach. RSC Adv 2016. [DOI: 10.1039/c6ra07176g] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023] Open
Abstract
The elastic properties of cellulose nanofibril (NFC) nanocomposites and nanopapers are predicted by a multiscale network model that shows that the deformation mechanisms are governed by the bonds between rigid NFC segments and in the kinked regions.
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Affiliation(s)
- F. Martoïa
- Univ. Grenoble Alpes
- LGP2
- F-38000 Grenoble
- France
- CNRS
| | | | - L. Orgéas
- Univ. Grenoble Alpes
- 3SR Lab
- F-38000 Grenoble
- France
- CNRS
| | | | - J.-L. Putaux
- Univ. Grenoble Alpes
- CERMAV
- F-38000 Grenoble
- France
- CNRS
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Feng T, Li M, Zhou J, Zhuang H, Chen F, Ye R, Campanella O, Fang Z. Application of molecular dynamics simulation in food carbohydrate research—a review. INNOV FOOD SCI EMERG 2015. [DOI: 10.1016/j.ifset.2015.06.015] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
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44
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Angles d’Ortoli T, Sjöberg NA, Vasiljeva P, Lindman J, Widmalm G, Bergenstråhle-Wohlert M, Wohlert J. Temperature Dependence of Hydroxymethyl Group Rotamer Populations in Cellooligomers. J Phys Chem B 2015; 119:9559-70. [DOI: 10.1021/acs.jpcb.5b02866] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Affiliation(s)
- Thibault Angles d’Ortoli
- Department
of Organic Chemistry, Arrhenius Laboratory, Stockholm University, SE-106
91 Stockholm, Sweden
| | - Nils A. Sjöberg
- Wallenberg
Wood Science Center, and the Department of Fibre and Polymer Technology, KTH Royal Institute of Technology, SE-100 44 Stockholm, Sweden
| | - Polina Vasiljeva
- Wallenberg
Wood Science Center, and the Department of Fibre and Polymer Technology, KTH Royal Institute of Technology, SE-100 44 Stockholm, Sweden
| | - Jonas Lindman
- Wallenberg
Wood Science Center, and the Department of Fibre and Polymer Technology, KTH Royal Institute of Technology, SE-100 44 Stockholm, Sweden
| | - Göran Widmalm
- Department
of Organic Chemistry, Arrhenius Laboratory, Stockholm University, SE-106
91 Stockholm, Sweden
| | - Malin Bergenstråhle-Wohlert
- Wallenberg
Wood Science Center, and the Department of Fibre and Polymer Technology, KTH Royal Institute of Technology, SE-100 44 Stockholm, Sweden
| | - Jakob Wohlert
- Wallenberg
Wood Science Center, and the Department of Fibre and Polymer Technology, KTH Royal Institute of Technology, SE-100 44 Stockholm, Sweden
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45
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Prakobna K, Terenzi C, Zhou Q, Furó I, Berglund LA. Core–shell cellulose nanofibers for biocomposites – Nanostructural effects in hydrated state. Carbohydr Polym 2015; 125:92-102. [DOI: 10.1016/j.carbpol.2015.02.059] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2015] [Revised: 02/16/2015] [Accepted: 02/18/2015] [Indexed: 12/01/2022]
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46
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Molecular deformation mechanisms in cellulose allomorphs and the role of hydrogen bonds. Carbohydr Polym 2015; 130:175-82. [PMID: 26076614 DOI: 10.1016/j.carbpol.2015.04.073] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2015] [Revised: 04/14/2015] [Accepted: 04/28/2015] [Indexed: 01/08/2023]
Abstract
Differences in tensile properties between cellulose crystal allomorphs cannot be rationalized by simply counting hydrogen bonds. From molecular dynamics computer simulations the cooperative nature of energy contributions to axial cellulose crystal modulus becomes apparent. Using a decomposition of inter and intramolecular forces as a function of tensile strain, the three allomorphs show dramatic differences in terms of how the contributions to elastic energy are distributed between covalent bonds, angles, dihedrals, electrostatic forces, dispersion and steric forces.
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47
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Oehme DP, Downton MT, Doblin MS, Wagner J, Gidley MJ, Bacic A. Unique aspects of the structure and dynamics of elementary Iβ cellulose microfibrils revealed by computational simulations. PLANT PHYSIOLOGY 2015; 168:3-17. [PMID: 25786828 PMCID: PMC4424011 DOI: 10.1104/pp.114.254664] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2014] [Accepted: 03/06/2015] [Indexed: 05/18/2023]
Abstract
The question of how many chains an elementary cellulose microfibril contains is critical to understanding the molecular mechanism(s) of cellulose biosynthesis and regulation. Given the hexagonal nature of the cellulose synthase rosette, it is assumed that the number of chains must be a multiple of six. We present molecular dynamics simulations on three different models of Iβ cellulose microfibrils, 18, 24, and 36 chains, to investigate their structure and dynamics in a hydrated environment. The 36-chain model stays in a conformational space that is very similar to the initial crystalline phase, while the 18- and 24-chain models sample a conformational space different from the crystalline structure yet similar to conformations observed in recent high-temperature molecular dynamics simulations. Major differences in the conformations sampled between the different models result from changes to the tilt of chains in different layers, specifically a second stage of tilt, increased rotation about the O2-C2 dihedral, and a greater sampling of non-TG exocyclic conformations, particularly the GG conformation in center layers and GT conformation in solvent-exposed exocyclic groups. With a reinterpretation of nuclear magnetic resonance data, specifically for contributions made to the C6 peak, data from the simulations suggest that the 18- and 24-chain structures are more viable models for an elementary cellulose microfibril, which also correlates with recent scattering and diffraction experimental data. These data inform biochemical and molecular studies that must explain how a six-particle cellulose synthase complex rosette synthesizes microfibrils likely comprised of either 18 or 24 chains.
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Affiliation(s)
- Daniel P Oehme
- IBM Research Collaboratory for Life Sciences-Melbourne, Victorian Life Sciences Computation Initiative, Carlton, Victoria 3010, Australia (D.P.O., M.T.D., J.W.); IBM Research-Australia, Carlton, Victoria 3010, Australia (D.P.O., M.T.D., J.W.); Australian Research Council Centre of Excellence in Plant Cell Walls, School of Botany (M.S.D., A.B.) and Bio21 Molecular Science and Biotechnology Institute (A.B.), University of Melbourne, Parkville, Victoria 3010, Australia; andAustralian Research Council Centre of Excellence in Plant Cell Walls and Centre for Nutrition and Food Sciences, Queensland Alliance for Agriculture and Food Innovation, University of Queensland, St. Lucia 4072, Australia (M.J.G.)
| | - Matthew T Downton
- IBM Research Collaboratory for Life Sciences-Melbourne, Victorian Life Sciences Computation Initiative, Carlton, Victoria 3010, Australia (D.P.O., M.T.D., J.W.); IBM Research-Australia, Carlton, Victoria 3010, Australia (D.P.O., M.T.D., J.W.); Australian Research Council Centre of Excellence in Plant Cell Walls, School of Botany (M.S.D., A.B.) and Bio21 Molecular Science and Biotechnology Institute (A.B.), University of Melbourne, Parkville, Victoria 3010, Australia; andAustralian Research Council Centre of Excellence in Plant Cell Walls and Centre for Nutrition and Food Sciences, Queensland Alliance for Agriculture and Food Innovation, University of Queensland, St. Lucia 4072, Australia (M.J.G.)
| | - Monika S Doblin
- IBM Research Collaboratory for Life Sciences-Melbourne, Victorian Life Sciences Computation Initiative, Carlton, Victoria 3010, Australia (D.P.O., M.T.D., J.W.); IBM Research-Australia, Carlton, Victoria 3010, Australia (D.P.O., M.T.D., J.W.); Australian Research Council Centre of Excellence in Plant Cell Walls, School of Botany (M.S.D., A.B.) and Bio21 Molecular Science and Biotechnology Institute (A.B.), University of Melbourne, Parkville, Victoria 3010, Australia; andAustralian Research Council Centre of Excellence in Plant Cell Walls and Centre for Nutrition and Food Sciences, Queensland Alliance for Agriculture and Food Innovation, University of Queensland, St. Lucia 4072, Australia (M.J.G.)
| | - John Wagner
- IBM Research Collaboratory for Life Sciences-Melbourne, Victorian Life Sciences Computation Initiative, Carlton, Victoria 3010, Australia (D.P.O., M.T.D., J.W.); IBM Research-Australia, Carlton, Victoria 3010, Australia (D.P.O., M.T.D., J.W.); Australian Research Council Centre of Excellence in Plant Cell Walls, School of Botany (M.S.D., A.B.) and Bio21 Molecular Science and Biotechnology Institute (A.B.), University of Melbourne, Parkville, Victoria 3010, Australia; andAustralian Research Council Centre of Excellence in Plant Cell Walls and Centre for Nutrition and Food Sciences, Queensland Alliance for Agriculture and Food Innovation, University of Queensland, St. Lucia 4072, Australia (M.J.G.)
| | - Michael J Gidley
- IBM Research Collaboratory for Life Sciences-Melbourne, Victorian Life Sciences Computation Initiative, Carlton, Victoria 3010, Australia (D.P.O., M.T.D., J.W.); IBM Research-Australia, Carlton, Victoria 3010, Australia (D.P.O., M.T.D., J.W.); Australian Research Council Centre of Excellence in Plant Cell Walls, School of Botany (M.S.D., A.B.) and Bio21 Molecular Science and Biotechnology Institute (A.B.), University of Melbourne, Parkville, Victoria 3010, Australia; andAustralian Research Council Centre of Excellence in Plant Cell Walls and Centre for Nutrition and Food Sciences, Queensland Alliance for Agriculture and Food Innovation, University of Queensland, St. Lucia 4072, Australia (M.J.G.)
| | - Antony Bacic
- IBM Research Collaboratory for Life Sciences-Melbourne, Victorian Life Sciences Computation Initiative, Carlton, Victoria 3010, Australia (D.P.O., M.T.D., J.W.); IBM Research-Australia, Carlton, Victoria 3010, Australia (D.P.O., M.T.D., J.W.); Australian Research Council Centre of Excellence in Plant Cell Walls, School of Botany (M.S.D., A.B.) and Bio21 Molecular Science and Biotechnology Institute (A.B.), University of Melbourne, Parkville, Victoria 3010, Australia; andAustralian Research Council Centre of Excellence in Plant Cell Walls and Centre for Nutrition and Food Sciences, Queensland Alliance for Agriculture and Food Innovation, University of Queensland, St. Lucia 4072, Australia (M.J.G.)
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Sauter J, Grafmüller A. Solution Properties of Hemicellulose Polysaccharides with Four Common Carbohydrate Force Fields. J Chem Theory Comput 2015; 11:1765-74. [PMID: 26574386 DOI: 10.1021/ct500924f] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Hemicellulose polysaccharides play an important role in the swelling behavior of the primary plant cell wall, and molecular dynamics simulations provide the means of gaining a concise understanding of the interactions of hemicellulose polysaccharides with water. Here, we compare four of the main polysaccharide force fields (CHARMM36 TIP3P, GROMOS56A6(CARBO) SPC, GLYCAM06h TIP3P, and GLYCAM06h TIP5P) for the most abundant hemicellulose backbone components. In particular, we compare aggregation, diffusion coefficients, system density, and investigate the free energy of hydration of saccharides in water. We find that the saccharides show nonphysical aggregation at low concentrations with the GLYCAM06h TIP3P force field, which can be rectified by the use of the TIP5P water model. As a result of the aggregation, GLYCAM06h TIP3P does not lead to reasonable diffusion coefficients whereas the diffusion coefficients, as well as the system density, agrees best with experimental data for the GLYCAM06h TIP5P force field. Overall, GLYCAM06h TIP5P gives good agreement with experimental free energy of hydration data for small saccharides. In addition, the free energy of hydration for short polysaccharides calculated with the GLYCAM06h TIP5P force field is consistent with the radial distribution functions between the polysaccharides and water, the hydration number of the polysaccharides, and the hydrogen bonds formed in the system.
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Affiliation(s)
- Jörg Sauter
- Theory and Bio-Systems, Max Planck Institute of Colloids and Interfaces , Potsdam, Germany
| | - Andrea Grafmüller
- Theory and Bio-Systems, Max Planck Institute of Colloids and Interfaces , Potsdam, Germany
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49
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Wang Y, Fan P, Tian M, Chen B. Molecular simulation for the effect of electric fields on the yield behaviour and cracking process of insulation paper. MOLECULAR SIMULATION 2014. [DOI: 10.1080/08927022.2014.947482] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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50
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Studies on Influence of Ammonia on Properties of Cellulose I-β Based on Molecular Dynamics Simulation. ACTA POLYM SIN 2014. [DOI: 10.3724/sp.j.1105.2014.13185] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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