1
|
Dong J, Wang P. Discovery of ultra-weakly coupled β-carotene J-aggregates by machine learning. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2024; 310:123950. [PMID: 38277780 DOI: 10.1016/j.saa.2024.123950] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2023] [Revised: 01/13/2024] [Accepted: 01/21/2024] [Indexed: 01/28/2024]
Abstract
Carotenoid aggregates are omnipresent in natural world and can be synthesized in hydrophilic environments. Despite different types of carotenoid aggregates have been reported hitherto, the way to predict the formation of carotenoid aggregates, i.e. H- or J-aggregates, is still challenging. Here, for the first time, we established machine learning models that can predict the formation behavior of carotenoid aggregates. The models are trained based on a database containing different types of carotenoid aggregates reported in the literatures. With the help of these machine learning models, we found a series of unknown types of β-carotene J-aggregates. These novel aggregates are ultra-weakly coupled and have absorption bands up to 700 nm, different from all the carotenoid aggregates reported previously. Our work demonstrates that the machine learning is a powerful tool to predict the formation behavior of carotenoid aggregates and can further lead into the discovery of new carotenoid aggregates for different applications.
Collapse
Affiliation(s)
- Jia Dong
- Department of Chemistry, Renmin University of China, Beijing 100872, People's Republic of China.
| | - Peng Wang
- Department of Chemistry, Renmin University of China, Beijing 100872, People's Republic of China.
| |
Collapse
|
2
|
Keşan G, Özcan E, Chábera P, Polívka T, Fuciman M. Time-Resolved Spectroelectrochemical Dynamics of Carotenoid 8'-apo-β-Carotenal. Chempluschem 2023; 88:e202300404. [PMID: 37747302 DOI: 10.1002/cplu.202300404] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Revised: 09/19/2023] [Accepted: 09/22/2023] [Indexed: 09/26/2023]
Abstract
This work examines the influence of applied external voltage in bulk electrolysis on the excited-state properties of 8'-apo-β-carotenal in acetonitrile by steady-state and ultrafast time-resolved absorption spectroscopy. The data collected under bulk electrolysis were compared with those taken without applied voltage. The steady-state measurements showed that although intensity of the S0 -S2 absorption band varies with the applied voltage, the spectral position remain nearly constant. Comparison of transient absorption spectra shows that the magnitude of the ICT-like band decreases during the experiment under applied voltage condition, and is associated with a prolongation of the S1 /ICT-like lifetime from 8 ps to 13 ps. Furthermore, switching off the applied voltage resulted in returning to no-voltage data within about 30 min. Our results show that the amplitude of the signal associated with the ICT state can be tuned by applying an external voltage.
Collapse
Affiliation(s)
- Gürkan Keşan
- Department of Physics, Faculty of Science, University of South Bohemia in České Budějovice, Branišovská 1760, 370 05 České, Budějovice, Czech Republic
| | - Emrah Özcan
- Department of Physics, Faculty of Science, University of South Bohemia in České Budějovice, Branišovská 1760, 370 05 České, Budějovice, Czech Republic
- Department of Chemistry, Faculty of Science, Gebze Technical University, 41400, Gebze, Kocaeli, Turkey
| | - Pavel Chábera
- Pavel Chábera, Division of Chemical Physics, Department of Chemistry, Lund University, Box 142, 221 00, Lund, Sweden
| | - Tomáš Polívka
- Department of Physics, Faculty of Science, University of South Bohemia in České Budějovice, Branišovská 1760, 370 05 České, Budějovice, Czech Republic
| | - Marcel Fuciman
- Department of Physics, Faculty of Science, University of South Bohemia in České Budějovice, Branišovská 1760, 370 05 České, Budějovice, Czech Republic
| |
Collapse
|
3
|
Yukihira N, Uragami C, Horiuchi K, Kosumi D, Gardiner AT, Cogdell RJ, Hashimoto H. Intramolecular charge-transfer enhances energy transfer efficiency in carotenoid-reconstituted light-harvesting 1 complex of purple photosynthetic bacteria. Commun Chem 2022; 5:135. [PMID: 36697849 PMCID: PMC9814923 DOI: 10.1038/s42004-022-00749-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2022] [Accepted: 10/04/2022] [Indexed: 01/28/2023] Open
Abstract
In bacterial photosynthesis, the excitation energy transfer (EET) from carotenoids to bacteriochlorophyll a has a significant impact on the overall efficiency of the primary photosynthetic process. This efficiency can be enhanced when the involved carotenoid has intramolecular charge-transfer (ICT) character, as found in light-harvesting systems of marine alga and diatoms. Here, we provide insights into the significance of ICT excited states following the incorporation of a higher plant carotenoid, β-apo-8'-carotenal, into the carotenoidless light-harvesting 1 (LH1) complex of the purple photosynthetic bacterium Rhodospirillum rubrum strain G9+. β-apo-8'-carotenal generates the ICT excited state in the reconstituted LH1 complex, achieving an efficiency of EET of up to 79%, which exceeds that found in the wild-type LH1 complex.
Collapse
Affiliation(s)
- Nao Yukihira
- Department of Applied Chemistry for Environment, Graduate School of Science and Technology, Kwansei Gakuin University, 1 Gakuen-Uegahara, Sanda, Hyogo, 669-1330, Japan
| | - Chiasa Uragami
- Department of Applied Chemistry for Environment, Graduate School of Science and Technology, Kwansei Gakuin University, 1 Gakuen-Uegahara, Sanda, Hyogo, 669-1330, Japan
| | - Kota Horiuchi
- Department of Applied Chemistry for Environment, Graduate School of Science and Technology, Kwansei Gakuin University, 1 Gakuen-Uegahara, Sanda, Hyogo, 669-1330, Japan
| | - Daisuke Kosumi
- Institute of Industrial Nanomaterials, Kumamoto University, 2-39-1 Kurokami, Chuou-ku, Kumamoto, 860-8555, Japan
| | - Alastair T Gardiner
- Laboratory of Anoxygenic Phototrophs, Institute of Microbiology, Czech Academy of Sciences, 379 81, Třeboň, Czech Republic
| | - Richard J Cogdell
- Institute of Molecular, Cell and Systems Biology, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, Scotland, UK
| | - Hideki Hashimoto
- Department of Applied Chemistry for Environment, Graduate School of Science and Technology, Kwansei Gakuin University, 1 Gakuen-Uegahara, Sanda, Hyogo, 669-1330, Japan.
| |
Collapse
|
4
|
Manna B, Nandi A, Vats BG. Role of nanosize and defect trapping upon singlet fission yield and singlet fission dynamics of 1,6-Diphenyl-1,3,5-hexatriene nanoaggregates. J Photochem Photobiol A Chem 2021. [DOI: 10.1016/j.jphotochem.2021.113262] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
|
5
|
Manna B, Nandi A. Singlet fission in nanoaggregate of bis(phenylethynyl) derivative of benzene (BPEB): High energy triplet exciton generation with >100 % yield. J Photochem Photobiol A Chem 2021. [DOI: 10.1016/j.jphotochem.2021.113251] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
|
6
|
Colon BA, Hassan MR, Saleheen A, Baker CA, Calhoun TR. Total Internal Reflection Transient Absorption Microscopy: An Online Detection Method for Microfluidics. J Phys Chem A 2020; 124:4160-4170. [PMID: 32338897 DOI: 10.1021/acs.jpca.9b12046] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
Microreactors have garnered widespread attention for their tunability and precise control of synthetic parameters to efficiently produce target species. Despite associated advances, a lack of online detection and optimization methods has stalled the progression of microfluidic reactors. Here we employ and characterize a total internal reflection transient absorption microscopy (TIRTAM) instrument to image excited state dynamics on a continuous flow device. The experiments presented demonstrate the capability to discriminate between different chromophores as well as in differentiating the effects of local chemical environments that a chromophore experiences. This work presents the first such online transient absorption measurements and provides a new direction for the advancement and optimization of chemical reactions in microfluidic devices.
Collapse
Affiliation(s)
- Brandon A Colon
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee 37996, United States
| | - Muhammad Redwan Hassan
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee 37996, United States
| | - Amirus Saleheen
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee 37996, United States
| | - Christopher A Baker
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee 37996, United States
| | - Tessa R Calhoun
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee 37996, United States
| |
Collapse
|
7
|
Dos Santos PL, Silveira OJ, Huang R, Jardim GAM, Matos MJS, da Silva Júnior EN, Monkman AP, Dias FB, Cury LA. Dynamics of aggregated states resolved by gated fluorescence in films of room temperature phosphorescent emitters. Phys Chem Chem Phys 2019; 21:3814-3821. [PMID: 30698176 DOI: 10.1039/c8cp07005a] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Phenazine derivative molecules were studied using steady state and time resolved fluorescence techniques and demonstrated to lead to strong formation of aggregated species, identified as dimers by time dependent density functional theory calculations. Blended films in a matrix of Zeonex®, produced at different concentrations, showed different contributions of dimer and monomer emissions in a prompt time frame, e.g. less than 50 ns. In contrast, the phosphorescence (e.g. emission from the triplet state) shows no significant effect on dimer formation, although strong dependence of the phosphorescence intensity on concentration is observed, leading to phosphorescence being quenched at higher concentration.
Collapse
Affiliation(s)
- Paloma L Dos Santos
- Department of Physics, University of Durham, South Road DH1 3LE, Durham, UK.
| | | | | | | | | | | | | | | | | |
Collapse
|
8
|
Staleva-Musto H, Kuznetsova V, West RG, Keşan G, Minofar B, Fuciman M, Bína D, Litvín R, Polívka T. Nonconjugated Acyloxy Group Deactivates the Intramolecular Charge-Transfer State in the Carotenoid Fucoxanthin. J Phys Chem B 2018; 122:2922-2930. [PMID: 29469573 DOI: 10.1021/acs.jpcb.8b00743] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
We used ultrafast transient absorption spectroscopy to study excited-state dynamics of the keto-carotenoid fucoxanthin (Fx) and its two derivatives: 19'-butanoyloxyfucoxanthin (bFx) and 19'-hexanoyloxyfucoxanthin (hFx). These derivatives occur in some light-harvesting systems of photosynthetic microorganisms, and their presence is typically related to stress conditions. Even though the hexanoyl (butanoyl) moiety is not a part of the conjugated system of hFx (bFx), their absorption spectra in polar solvents exhibit more pronounced vibrational bands of the S2 state than for Fx. The effect of the nonconjugated acyloxy moiety is further observed in transient absorption spectra, which for Fx exhibit characteristic features of an intramolecular charge transfer (ICT) state in all polar solvents. For bFx and hFx, however, much weaker ICT features are detected in methanol, and the spectral markers of the ICT state disappear completely in polar, but aprotic acetonitrile. The presence of the acyloxy moiety also alters the lifetimes of the S1/ICT state. For Fx, the lifetimes are 60, 30, and 20 ps in n-hexane, acetonitrile, and methanol, whereas for bFx and hFx, these lifetimes yield 60, 60, and 40 ps, respectively. Testing the S1/ICT state lifetimes of hFx in other solvents revealed that some ICT features can be induced only in polar, protic solvents (methanol, ethanol, and ethylene glycol). Thus, bFx and hFx represent a rather rare example of a system in which a nonconjugated functional group significantly alters excited-state dynamics. By comparison with other carotenoids, we show that a keto group at the acyloxy tail, even though it is not in conjugation, affects the electron distribution along the conjugated backbone, resulting in the observed decrease of the ICT character of the S1/ICT state of bFx and hFx.
Collapse
Affiliation(s)
- Hristina Staleva-Musto
- Institute of Physics and Biophysics, Faculty of Science , University of South Bohemia , Branišovská 1760 , CZ 370 05 České Budějovice , Czech Republic
| | - Valentyna Kuznetsova
- Institute of Physics and Biophysics, Faculty of Science , University of South Bohemia , Branišovská 1760 , CZ 370 05 České Budějovice , Czech Republic
| | - Robert G West
- Institute of Physics and Biophysics, Faculty of Science , University of South Bohemia , Branišovská 1760 , CZ 370 05 České Budějovice , Czech Republic
| | - Gürkan Keşan
- Institute of Physics and Biophysics, Faculty of Science , University of South Bohemia , Branišovská 1760 , CZ 370 05 České Budějovice , Czech Republic.,Department of Chemistry, Faculty of Science , Gebze Technical University , 41400 Gebze , Kocaeli , Turkey
| | - Babak Minofar
- Center for Nanobiology and Structural Biology, Institute of Microbiology , Czech Academy of Sciences , CZ 373 33 Nové Hrady , Czech Republic
| | - Marcel Fuciman
- Institute of Physics and Biophysics, Faculty of Science , University of South Bohemia , Branišovská 1760 , CZ 370 05 České Budějovice , Czech Republic
| | - David Bína
- Institute of Physics and Biophysics, Faculty of Science , University of South Bohemia , Branišovská 1760 , CZ 370 05 České Budějovice , Czech Republic.,Institute of Plant Molecular Biology, Biological Centre , Czech Academy of Sciences , CZ 370 05 České Budějovice , Czech Republic
| | - Radek Litvín
- Institute of Physics and Biophysics, Faculty of Science , University of South Bohemia , Branišovská 1760 , CZ 370 05 České Budějovice , Czech Republic.,Institute of Plant Molecular Biology, Biological Centre , Czech Academy of Sciences , CZ 370 05 České Budějovice , Czech Republic
| | - Tomáš Polívka
- Institute of Physics and Biophysics, Faculty of Science , University of South Bohemia , Branišovská 1760 , CZ 370 05 České Budějovice , Czech Republic.,Institute of Plant Molecular Biology, Biological Centre , Czech Academy of Sciences , CZ 370 05 České Budějovice , Czech Republic
| |
Collapse
|
9
|
Oliver TAA. Recent advances in multidimensional ultrafast spectroscopy. ROYAL SOCIETY OPEN SCIENCE 2018; 5:171425. [PMID: 29410844 PMCID: PMC5792921 DOI: 10.1098/rsos.171425] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/19/2017] [Accepted: 12/20/2017] [Indexed: 05/14/2023]
Abstract
Multidimensional ultrafast spectroscopies are one of the premier tools to investigate condensed phase dynamics of biological, chemical and functional nanomaterial systems. As they reach maturity, the variety of frequency domains that can be explored has vastly increased, with experimental techniques capable of correlating excitation and emission frequencies from the terahertz through to the ultraviolet. Some of the most recent innovations also include extreme cross-peak spectroscopies that directly correlate the dynamics of electronic and vibrational states. This review article summarizes the key technological advances that have permitted these recent advances, and the insights gained from new multidimensional spectroscopic probes.
Collapse
Affiliation(s)
- Thomas A. A. Oliver
- School of Chemistry, Cantock's Close, University of Bristol, Bristol BS8 1TS, UK
| |
Collapse
|
10
|
Šlouf V, Kuznetsova V, Fuciman M, de Carbon CB, Wilson A, Kirilovsky D, Polívka T. Ultrafast spectroscopy tracks carotenoid configurations in the orange and red carotenoid proteins from cyanobacteria. PHOTOSYNTHESIS RESEARCH 2017; 131:105-117. [PMID: 27612863 DOI: 10.1007/s11120-016-0302-6] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/07/2016] [Accepted: 08/30/2016] [Indexed: 06/06/2023]
Abstract
A quenching mechanism mediated by the orange carotenoid protein (OCP) is one of the ways cyanobacteria protect themselves against photooxidative stress. Here, we present a femtosecond spectroscopic study comparing OCP and RCP (red carotenoid protein) samples binding different carotenoids. We confirmed significant changes in carotenoid configuration upon OCP activation reported by Leverenz et al. (Science 348:1463-1466. doi: 10.1126/science.aaa7234 , 2015) by comparing the transient spectra of OCP and RCP. The most important marker of these changes was the magnitude of the transient signal associated with the carotenoid intramolecular charge-transfer (ICT) state. While OCP with canthaxanthin exhibited a weak ICT signal, it increased significantly for canthaxanthin bound to RCP. On the contrary, a strong ICT signal was recorded in OCP binding echinenone excited at the red edge of the absorption spectrum. Because the carbonyl oxygen responsible for the appearance of the ICT signal is located at the end rings of both carotenoids, the magnitude of the ICT signal can be used to estimate the torsion angles of the end rings. Application of two different excitation wavelengths to study OCP demonstrated that the OCP sample contains two spectroscopically distinct populations, none of which is corresponding to the photoactivated product of OCP.
Collapse
Affiliation(s)
- Václav Šlouf
- Institute of Physics and Biophysics, Faculty of Science, University of South Bohemia, Branišovská 1760, 370 05, České Budějovice, Czech Republic
| | - Valentyna Kuznetsova
- Institute of Physics and Biophysics, Faculty of Science, University of South Bohemia, Branišovská 1760, 370 05, České Budějovice, Czech Republic
| | - Marcel Fuciman
- Institute of Physics and Biophysics, Faculty of Science, University of South Bohemia, Branišovská 1760, 370 05, České Budějovice, Czech Republic
| | - Céline Bourcier de Carbon
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Sud, Université Paris-Saclay, 91198, Gif-sur-Yvette, France
- Institut de Biologie et Technologies de Saclay (iBiTec-S), Commissariat à l'Energie Atomique (CEA), 91191, Gif-sur-Yvette, France
| | - Adjélé Wilson
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Sud, Université Paris-Saclay, 91198, Gif-sur-Yvette, France
- Institut de Biologie et Technologies de Saclay (iBiTec-S), Commissariat à l'Energie Atomique (CEA), 91191, Gif-sur-Yvette, France
| | - Diana Kirilovsky
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Sud, Université Paris-Saclay, 91198, Gif-sur-Yvette, France
- Institut de Biologie et Technologies de Saclay (iBiTec-S), Commissariat à l'Energie Atomique (CEA), 91191, Gif-sur-Yvette, France
| | - Tomáš Polívka
- Institute of Physics and Biophysics, Faculty of Science, University of South Bohemia, Branišovská 1760, 370 05, České Budějovice, Czech Republic.
- Institute of Plant Molecular Biology, Biological Centre, Czech Academy of Sciences, Branišovská 31, 370 05, České Budějovice, Czech Republic.
| |
Collapse
|
11
|
Otsuka M, Mori Y, Takano K. Theoretical study on photophysical properties of 3′-hydroxyechinenone and the effects of interactions with orange carotenoid protein. Chem Phys Lett 2016. [DOI: 10.1016/j.cplett.2016.01.028] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
|
12
|
Keşan G, Durchan M, Tichý J, Minofar B, Kuznetsova V, Fuciman M, Šlouf V, Parlak C, Polívka T. Different Response of Carbonyl Carotenoids to Solvent Proticity Helps To Estimate Structure of the Unknown Carotenoid from Chromera velia. J Phys Chem B 2015; 119:12653-63. [PMID: 26362118 DOI: 10.1021/acs.jpcb.5b08152] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
In order to estimate the possible structure of the unknown carbonyl carotenoid related to isofucoxanthin from Chromera velia denoted as isofucoxanthin-like carotenoid (Ifx-l), we employed steady-state and ultrafast time-resolved spectroscopic techniques to investigate spectroscopic properties of Ifx-l in various solvents. The results were compared with those measured for related carotenoids with known structure: fucoxanthin (Fx) and isofucoxanthin (Ifx). The experimental data were complemented by quantum chemistry calculations and molecular modeling. The data show that Ifx-l must have longer effective conjugation length than Ifx. Yet, the magnitude of polarity-dependent changes in Ifx-l is larger than for Ifx, suggesting significant differences in structure of these two carotenoids. The most interesting spectroscopic feature of Ifx-l is its response to solvent proticity. The transient absorption data show that (1) the magnitude of the ICT-like band of Ifx-l in acetonitrile is larger than in methanol and (2) the S1/ICT lifetime of Ifx-l in acetonitrile, 4 ps, is markedly shorter than in methanol (10 ps). This is opposite behavior than for Fx and Ifx whose S1/ICT lifetimes are always shorter in protic solvent methanol (20 and 13 ps) than in aprotic acetonitrile (30 and 17 ps). Comparison with other carbonyl carotenoids reported earlier showed that proticity response of Ifx-l is consistent with presence of a conjugated lactone ring. Combining the experimental data and quantum chemistry calculations, we estimated a possible structure of Ifx-l.
Collapse
Affiliation(s)
- Gürkan Keşan
- Institute of Physics and Biophysics, Faculty of Science, University of South Bohemia , Branišovská 1760, 37005 České Budějovice, Czech Republic
| | - Milan Durchan
- Institute of Physics and Biophysics, Faculty of Science, University of South Bohemia , Branišovská 1760, 37005 České Budějovice, Czech Republic.,Institute of Plant Molecular Biology, Biological Centre, Czech Academy of Sciences , České Budějovice, Czech Republic
| | - Josef Tichý
- Institute of Physics and Biophysics, Faculty of Science, University of South Bohemia , Branišovská 1760, 37005 České Budějovice, Czech Republic.,Institute of Plant Molecular Biology, Biological Centre, Czech Academy of Sciences , České Budějovice, Czech Republic
| | - Babak Minofar
- Institute of Physics and Biophysics, Faculty of Science, University of South Bohemia , Branišovská 1760, 37005 České Budějovice, Czech Republic.,Center for Nanobiology and Structural Biology, Institute of Microbiology and Global Change Research Center, Academy of Sciences of the Czech Republic , Nové Hrady, Czech Republic
| | - Valentyna Kuznetsova
- Institute of Physics and Biophysics, Faculty of Science, University of South Bohemia , Branišovská 1760, 37005 České Budějovice, Czech Republic
| | - Marcel Fuciman
- Institute of Physics and Biophysics, Faculty of Science, University of South Bohemia , Branišovská 1760, 37005 České Budějovice, Czech Republic
| | - Václav Šlouf
- Institute of Physics and Biophysics, Faculty of Science, University of South Bohemia , Branišovská 1760, 37005 České Budějovice, Czech Republic
| | - Cemal Parlak
- Department of Physics, Dumlupınar University , Kütahya, Turkey
| | - Tomáš Polívka
- Institute of Physics and Biophysics, Faculty of Science, University of South Bohemia , Branišovská 1760, 37005 České Budějovice, Czech Republic.,Institute of Plant Molecular Biology, Biological Centre, Czech Academy of Sciences , České Budějovice, Czech Republic
| |
Collapse
|
13
|
Oliver TAA, Fleming GR. Following Coupled Electronic-Nuclear Motion through Conical Intersections in the Ultrafast Relaxation of β-Apo-8′-carotenal. J Phys Chem B 2015; 119:11428-41. [DOI: 10.1021/acs.jpcb.5b04893] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Affiliation(s)
- Thomas A. A. Oliver
- Physical
Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Graham R. Fleming
- Physical
Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| |
Collapse
|
14
|
Kardaś TM, Ratajska-Gadomska B, Lapini A, Ragnoni E, Righini R, Di Donato M, Foggi P, Gadomski W. Dynamics of the time-resolved stimulated Raman scattering spectrum in presence of transient vibronic inversion of population on the example of optically excited trans-β-apo-8'-carotenal. J Chem Phys 2015; 140:204312. [PMID: 24880285 DOI: 10.1063/1.4879060] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We have studied the effect of transient vibrational inversion of population in trans-β-apo-8(')-carotenal on the time-resolved femtosecond stimulated Raman scattering (TR-FSRS) signal. The experimental data are interpreted by applying a quantum mechanical approach, using the formalism of projection operators for constructing the theoretical model of TR-FSRS. Within this theoretical frame we explain the presence of transient Raman losses on the Stokes side of the TR-FSRS spectrum as the effect of vibrational inversion of population. In view of the obtained experimental and theoretical results, we conclude that the excited S2 electronic level of trans-β-apo-8(')-carotenal relaxes towards the S0 ground state through a set of four vibrational sublevels of S1 state.
Collapse
Affiliation(s)
- T M Kardaś
- Department of Chemistry, University of Warsaw, Zwirki Wigury 101, 02-089 Warsaw, Poland
| | - B Ratajska-Gadomska
- Department of Chemistry, University of Warsaw, Zwirki Wigury 101, 02-089 Warsaw, Poland
| | - A Lapini
- European Laboratory for Non-linear Spectroscopy (LENS), Universit`a di Firenze, Via Nello Carrara 1, I-50019 Sesto Fiorentino (FI), Italy
| | - E Ragnoni
- European Laboratory for Non-linear Spectroscopy (LENS), Universit`a di Firenze, Via Nello Carrara 1, I-50019 Sesto Fiorentino (FI), Italy
| | - R Righini
- European Laboratory for Non-linear Spectroscopy (LENS), Universit`a di Firenze, Via Nello Carrara 1, I-50019 Sesto Fiorentino (FI), Italy
| | - M Di Donato
- European Laboratory for Non-linear Spectroscopy (LENS), Universit`a di Firenze, Via Nello Carrara 1, I-50019 Sesto Fiorentino (FI), Italy
| | - P Foggi
- European Laboratory for Non-linear Spectroscopy (LENS), Universit`a di Firenze, Via Nello Carrara 1, I-50019 Sesto Fiorentino (FI), Italy
| | - W Gadomski
- Department of Chemistry, University of Warsaw, Zwirki Wigury 101, 02-089 Warsaw, Poland
| |
Collapse
|
15
|
Magdaong N, LaFountain AM, Greco JA, Gardiner AT, Carey AM, Cogdell RJ, Gibson GN, Birge RR, Frank HA. High efficiency light harvesting by carotenoids in the LH2 complex from photosynthetic bacteria: unique adaptation to growth under low-light conditions. J Phys Chem B 2014; 118:11172-89. [PMID: 25171303 PMCID: PMC4174993 DOI: 10.1021/jp5070984] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2014] [Revised: 08/26/2014] [Indexed: 12/03/2022]
Abstract
Rhodopin, rhodopinal, and their glucoside derivatives are carotenoids that accumulate in different amounts in the photosynthetic bacterium, Rhodoblastus (Rbl.) acidophilus strain 7050, depending on the intensity of the light under which the organism is grown. The different growth conditions also have a profound effect on the spectra of the bacteriochlorophyll (BChl) pigments that assemble in the major LH2 light-harvesting pigment-protein complex. Under high-light conditions the well-characterized B800-850 LH2 complex is formed and accumulates rhodopin and rhodopin glucoside as the primary carotenoids. Under low-light conditions, a variant LH2, denoted B800-820, is formed, and rhodopinal and rhodopinal glucoside are the most abundant carotenoids. The present investigation compares and contrasts the spectral properties and dynamics of the excited states of rhodopin and rhodopinal in solution. In addition, the systematic differences in pigment composition and structure of the chromophores in the LH2 complexes provide an opportunity to explore the effect of these factors on the rate and efficiency of carotenoid-to-BChl energy transfer. It is found that the enzymatic conversion of rhodopin to rhodopinal by Rbl. acidophilus 7050 grown under low-light conditions results in nearly 100% carotenoid-to-BChl energy transfer efficiency in the LH2 complex. This comparative analysis provides insight into how photosynthetic systems are able to adapt and survive under challenging environmental conditions.
Collapse
Affiliation(s)
- Nikki
M. Magdaong
- Department
of Chemistry, University of Connecticut, Storrs, Connecticut 06269, United States
| | - Amy M. LaFountain
- Department
of Chemistry, University of Connecticut, Storrs, Connecticut 06269, United States
| | - Jordan A. Greco
- Department
of Chemistry, University of Connecticut, Storrs, Connecticut 06269, United States
| | - Alastair T. Gardiner
- Institute
of Molecular Cell and Systems Biology, University
of Glasgow, Glasgow G12 8TA, Scotland
| | - Anne-Marie Carey
- Institute
of Molecular Cell and Systems Biology, University
of Glasgow, Glasgow G12 8TA, Scotland
| | - Richard J. Cogdell
- Institute
of Molecular Cell and Systems Biology, University
of Glasgow, Glasgow G12 8TA, Scotland
| | - George N. Gibson
- Department
of Physics, University of Connecticut, Storrs, Connecticut 06269, United States
| | - Robert R. Birge
- Department
of Chemistry, University of Connecticut, Storrs, Connecticut 06269, United States
| | - Harry A. Frank
- Department
of Chemistry, University of Connecticut, Storrs, Connecticut 06269, United States
| |
Collapse
|
16
|
Di Donato M, Segado Centellas M, Lapini A, Lima M, Avila F, Santoro F, Cappelli C, Righini R. Combination of transient 2D-IR experiments and ab initio computations sheds light on the formation of the charge-transfer state in photoexcited carbonyl carotenoids. J Phys Chem B 2014; 118:9613-30. [PMID: 25050938 DOI: 10.1021/jp505473j] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The excited state dynamics of carbonyl carotenoids is very complex because of the coupling of single- and doubly excited states and the possible involvement of intramolecular charge-transfer (ICT) states. In this contribution we employ ultrafast infrared spectroscopy and theoretical computations to investigate the relaxation dynamics of trans-8'-apo-β-carotenal occurring on the picosecond time scale, after excitation in the S2 state. In a (slightly) polar solvent like chloroform, one-dimensional (T1D-IR) and two-dimensional (T2D-IR) transient infrared spectroscopy reveal spectral components with characteristic frequencies and lifetimes that are not observed in nonpolar solvents (cyclohexane). Combining experimental evidence with an analysis of CASPT2//CASSCF ground and excited state minima and energy profiles, complemented with TDDFT calculations in gas phase and in solvent, we propose a photochemical decay mechanism for this system where only the bright single-excited 1Bu(+) and the dark double-excited 2Ag(-) states are involved. Specifically, the initially populated 1Bu(+) relaxes toward 2Ag(-) in 200 fs. In a nonpolar solvent 2Ag(-) decays to the ground state (GS) in 25 ps. In polar solvents, distortions along twisting modes of the chain promote a repopulation of the 1Bu(+) state which then quickly relaxes to the GS (18 ps in chloroform). The 1Bu(+) state has a high electric dipole and is the main contributor to the charge-transfer state involved in the dynamics in polar solvents. The 2Ag(-) → 1Bu(+) population transfer is evidenced by a cross peak on the T2D-IR map revealing that the motions along the same stretching of the conjugated chain on the 2Ag(-) and 1Bu(+) states are coupled.
Collapse
Affiliation(s)
- Mariangela Di Donato
- LENS (European Laboratory for Nonlinear Spectroscopy) via N. Carrara 1, 50019 Sesto Fiorentino (FI), Italy
| | | | | | | | | | | | | | | |
Collapse
|
17
|
Lee I, Lee S, Pang Y. Excited-State Dynamics of Carotenoids Studied by Femtosecond Transient Absorption Spectroscopy. B KOREAN CHEM SOC 2014. [DOI: 10.5012/bkcs.2014.35.3.851] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
|
18
|
Kosumi D, Kajikawa T, Okumura S, Sugisaki M, Sakaguchi K, Katsumura S, Hashimoto H. Elucidation and Control of an Intramolecular Charge Transfer Property of Fucoxanthin by a Modification of Its Polyene Chain Length. J Phys Chem Lett 2014; 5:792-797. [PMID: 26274069 DOI: 10.1021/jz5000287] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
Fucoxanthin is an essential pigment for the highly efficient light-harvesting function of marine algal photosynthesis. It exhibits excited state properties attributed to intramolecular charge transfer (ICT) in polar environments due to the presence of the carbonyl group in its polyene backbone. This report describes the excited state properties of fucoxanthin homologues with four to eight conjugated double bonds in various solvents using the femtosecond pump-probe technique. The results clarified that fucoxanthin homologues with longer polyene chains did not possess pronounced ICT spectroscopic signatures, while the shorter fucoxanthin homologues had a strong ICT character, even in a nonpolar solvent. On the basis of the observations, we quantitatively correlated the ICT character in the excited state to the conjugated polyene chain lengths of fucoxanthin molecules.
Collapse
Affiliation(s)
- Daisuke Kosumi
- †Osaka City University Advanced Research Institute for Natural Science and Technology (OCARINA), 3-3-138 Sugimoto, Sumiyoshi-ku, Osaka 558-8585, Japan
| | - Takayuki Kajikawa
- ‡Department of Chemistry, School of Science and Technology, Kwansei Gakuin University, Gakuen, Sanda, Hyogo 669-1337, Japan
| | - Satoshi Okumura
- ‡Department of Chemistry, School of Science and Technology, Kwansei Gakuin University, Gakuen, Sanda, Hyogo 669-1337, Japan
| | - Mitsuru Sugisaki
- §Department of Physics, Graduate School of Science, Osaka City University, 3-3-138 Sugimoto, Sumiyoshi-ku, Osaka 558-8585, Japan
| | - Kazuhiko Sakaguchi
- ∥Department of Chemistry, Graduate School of Science, Osaka City University, 3-3-138 Sugimoto, Sumiyoshi-ku, Osaka 558-8585, Japan
| | - Shigeo Katsumura
- ‡Department of Chemistry, School of Science and Technology, Kwansei Gakuin University, Gakuen, Sanda, Hyogo 669-1337, Japan
| | - Hideki Hashimoto
- †Osaka City University Advanced Research Institute for Natural Science and Technology (OCARINA), 3-3-138 Sugimoto, Sumiyoshi-ku, Osaka 558-8585, Japan
- §Department of Physics, Graduate School of Science, Osaka City University, 3-3-138 Sugimoto, Sumiyoshi-ku, Osaka 558-8585, Japan
| |
Collapse
|
19
|
Slouf V, Fuciman M, Johanning S, Hofmann E, Frank HA, Polívka T. Low-temperature time-resolved spectroscopic study of the major light-harvesting complex of Amphidinium carterae. PHOTOSYNTHESIS RESEARCH 2013; 117:257-265. [PMID: 23904192 DOI: 10.1007/s11120-013-9900-8] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/22/2013] [Accepted: 07/22/2013] [Indexed: 06/02/2023]
Abstract
The major light-harvesting complex of Amphidinium (A.) carterae, chlorophyll-a-chlorophyll-c 2-peridinin-protein complex (acpPC), was studied using ultrafast pump-probe spectroscopy at low temperature (60 K). An efficient peridinin-chlorophyll-a energy transfer was observed. The stimulated emission signal monitored in the near-infrared spectral region was stronger when redder part of peridinin pool was excited, indicating that these peridinins have the S1/ICT (intramolecular charge-transfer) state with significant charge-transfer character. This may lead to enhanced energy transfer efficiency from "red" peridinins to chlorophyll-a. Contrary to the water-soluble antenna of A. carterae, peridinin-chlorophyll-a protein, the energy transfer rates in acpPC were slower under low-temperature conditions. This fact underscores the influence of the protein environment on the excited-state dynamics of pigments and/or the specificity of organization of the two pigment-protein complexes.
Collapse
Affiliation(s)
- Václav Slouf
- Faculty of Science, University of South Bohemia, Branišovská 31, 370 05, České Budějovice, Czech Republic
| | | | | | | | | | | |
Collapse
|
20
|
Fuciman M, Durchan M, Šlouf V, Keşan G, Polívka T. Excited-state dynamics of astaxanthin aggregates. Chem Phys Lett 2013. [DOI: 10.1016/j.cplett.2013.03.009] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
|