1
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Hu Q, Jia H, Wang Y, Xu S. Force-Induced Visualization of Nucleic Acid Functions with Single-Nucleotide Resolution. SENSORS (BASEL, SWITZERLAND) 2023; 23:7762. [PMID: 37765816 PMCID: PMC10536483 DOI: 10.3390/s23187762] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/09/2023] [Revised: 08/29/2023] [Accepted: 09/04/2023] [Indexed: 09/29/2023]
Abstract
Nucleic acids are major targets for molecular sensing because of their wide involvement in biological functions. Determining their presence, movement, and binding specificity is thus well pursued. However, many current techniques are usually sophisticated, expensive, and often lack single-nucleotide resolution. In this paper, we report the force-induced visualization method that relies on the novel concept of mechanical force to determine the functional positions of nucleic acids with single-nucleotide resolution. The use of an adjustable mechanical force overcomes the variation of analyte concentration and differences in buffer conditions that are common in biological settings. Two examples are described to validate the method: one is probing the mRNA movement during ribosomal translocation, and the other is revealing the interacting sites and strengths of DNA-binding drugs based on the force amplitude. The flexibility of the method, simplicity of the associated device, and capability of multiplexed detection will potentially enable a broad range of biomedical applications.
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Affiliation(s)
- Qiongzheng Hu
- Department of Chemistry, University of Houston, Houston, TX 77204, USA; (Q.H.)
| | - Haina Jia
- Department of Chemistry, University of Houston, Houston, TX 77204, USA; (Q.H.)
| | - Yuhong Wang
- Department of Biology and Biochemistry, University of Houston, Houston, TX 77204, USA;
| | - Shoujun Xu
- Department of Chemistry, University of Houston, Houston, TX 77204, USA; (Q.H.)
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2
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Blake MJ, Castillo HB, Curtis AE, Calhoun TR. Facilitating flip-flop: Structural tuning of molecule-membrane interactions in living bacteria. Biophys J 2023; 122:1735-1747. [PMID: 37041744 PMCID: PMC10209030 DOI: 10.1016/j.bpj.2023.04.003] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2022] [Revised: 03/17/2023] [Accepted: 04/04/2023] [Indexed: 04/13/2023] Open
Abstract
The first barrier that a small molecule must overcome before trespassing into a living cell is the lipid bilayer surrounding the intracellular content. It is imperative, therefore, to understand how the structure of a small molecule influences its fate in this region. Through the use of second harmonic generation, we show how the differing degrees of ionic headgroups, conjugated system, and branched hydrocarbon tail disparities of a series of four styryl dye molecules influence the propensity to "flip-flop" or to be further organized in the outer leaflet by the membrane. We show here that initial adsorption experiments match previous studies on model systems; however, more complex dynamics are observed over time. Aside from probe molecule structure, these dynamics also vary between cell species and can deviate from trends reported based on model membranes. Specifically, we show here that the membrane composition is an important factor to consider for headgroup-mediated small-molecule dynamics. Overall, the findings presented here on how structural variability of small molecules impacts their initial adsorption and eventual destinations within membranes in the context of living cells could have practical applications in antibiotic and drug adjuvant design.
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Affiliation(s)
- Marea J Blake
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee
| | - Hannah B Castillo
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee
| | - Anna E Curtis
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee
| | - Tessa R Calhoun
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee.
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3
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Myres GJ, Harris JM. Stable Immobilization of DNA to Silica Surfaces by Sequential Michael Addition Reactions Developed with Insights from Confocal Raman Microscopy. Anal Chem 2023; 95:3499-3506. [PMID: 36718639 DOI: 10.1021/acs.analchem.2c05594] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
The immobilization of DNA to surfaces is required for numerous biosensing applications related to the capture of target DNA sequences, proteins, or small-molecule analytes from solution. For these applications to be successful, the chemistry of DNA immobilization should be efficient, reproducible, and stable and should allow the immobilized DNA to adopt a secondary structure required for association with its respective target molecule. To develop and characterize surface immobilization chemistry to meet this challenge, it is invaluable to have a quantitative, surface-sensitive method that can report the interfacial chemistry at each step, while also being capable of determining the structure, stability, and activity of the tethered DNA product. In this work, we develop a method to immobilize DNA to silica, glass, or other oxide surfaces by carrying out the reactions in porous silica particles. Due to the high specific surface area of porous silica, the local concentrations of surface-immobilized molecules within the particle are sufficiently high that interfacial chemistry can be monitored at each step of the process with confocal Raman microscopy, providing a unique capability to assess the molecular composition, structure, yield, and surface coverage of these reactions. We employ this methodology to investigate the steps for immobilizing thiolated-DNA to thiol-modified silica surfaces through sequential Michael addition reactions with the cross-linker 1,4-phenylene-bismaleimide. A key advantage of employing a phenyl-bismaleimide over a comparable alkyl coupling reagent is the efficient conversion of the initial phenyl-thiosuccinimide to a more stable succinamic acid thioether linkage. This transformation was confirmed by in situ Raman spectroscopy measurements, and the resulting succinamic acid thioether product exhibited greater than 95% retention of surface-immobilized DNA after 12 days at room temperature in aqueous buffer. Confocal Raman microscopy was also used to assess the conformational freedom of surface-immobilized DNA by comparing the structure of a 23-mer DNA hairpin sequence under duplex-forming and unfolding conditions. We find that the immobilized DNA hairpin can undergo reversible intramolecular duplex formation based on the changes in frequencies and intensities of the phosphate backbone and base-specific vibrational modes that are informative of the hybridization state of DNA.
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Affiliation(s)
- Grant J Myres
- Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, Utah 84112-0850 United States
| | - Joel M Harris
- Department of Chemistry, University of Utah, 315 South 1400 East, Salt Lake City, Utah 84112-0850 United States
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4
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Dikkumbura A, Aucoin AV, Ali RO, Dalier A, Gilbert DW, Schneider GJ, Haber LH. Influence of Acetaminophen on Molecular Adsorption and Transport Properties at Colloidal Liposome Surfaces Studied by Second Harmonic Generation Spectroscopy. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2022; 38:3852-3859. [PMID: 35298170 PMCID: PMC8969770 DOI: 10.1021/acs.langmuir.2c00086] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/12/2022] [Revised: 03/01/2022] [Indexed: 06/14/2023]
Abstract
Time-resolved second harmonic generation (SHG) spectroscopy is used to investigate acetaminophen (APAP)-induced changes in the adsorption and transport properties of malachite green isothiocyanate (MGITC) dye to the surface of unilamellar 1,2-dioleoyl-sn-glycero-3-phosphocholine (DOPC) liposomes in an aqueous colloidal suspension. The adsorption of MGITC to DOPC liposome nanoparticles in water is driven by electrostatic and dipole-dipole interactions between the positively charged MGITC molecules and the zwitterionic phospholipid membranes. The SHG intensity increases as the added MGITC dye concentration is increased, reaching a maximum as the MGITC adsorbate at the DOPC bilayer interface approaches a saturation value. The experimental adsorption isotherms are fit using the modified Langmuir model to obtain the adsorption free energies, adsorption equilibrium constants, and the adsorbate site densities to the DOPC liposomes both with and without APAP. The addition of APAP is shown to increase MGITC adsorption to the liposome interface, resulting in a larger adsorption equilibrium constant and a higher adsorption site density. The MGITC transport times are also measured, showing that APAP decreases the transport rate across the DOPC liposome bilayer, especially at higher MGITC concentrations. Studying molecular interactions at the colloidal liposome interface using SHG spectroscopy provides a detailed foundation for developing potential liposome-based drug-delivery systems.
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Affiliation(s)
- Asela
S. Dikkumbura
- Department
of Chemistry, Louisiana State University, Baton Rouge, Louisiana 70803, United States
| | - Alexandra V. Aucoin
- Department
of Chemistry, Louisiana State University, Baton Rouge, Louisiana 70803, United States
| | - Rasidah O. Ali
- Department
of Chemistry, Louisiana State University, Baton Rouge, Louisiana 70803, United States
| | - Aliyah Dalier
- Southeastern
Louisiana University, Hammond, Louisiana 70402, United States
| | - Dylan W. Gilbert
- Southeastern
Louisiana University, Hammond, Louisiana 70402, United States
| | - Gerald J. Schneider
- Department
of Chemistry, Louisiana State University, Baton Rouge, Louisiana 70803, United States
- Department
of Physics and Astronomy, Louisiana State
University, Baton
Rouge, Louisiana 70803, United States
| | - Louis H. Haber
- Department
of Chemistry, Louisiana State University, Baton Rouge, Louisiana 70803, United States
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5
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Sinha R, Chatterjee A, Purkayastha P. Graphene Quantum Dot Assisted Translocation of Daunomycin through an Ordered Lipid Membrane: A Study by Fluorescence Lifetime Imaging Microscopy and Resonance Energy Transfer. J Phys Chem B 2022; 126:1232-1241. [PMID: 35129981 DOI: 10.1021/acs.jpcb.1c09376] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
Daunomycin (DN) is a well-known chemotherapy drug frequently used in treating acute myeloid and lymphoblastic leukemia. It needs to be delivered to the therapeutic target by a delivering agent that beats the blood-brain barrier. DN is known to be specifically located at the membrane surface and scantly to the bilayer. Penetration of DN into the membrane bilayer depends on the molecular packing of the lipid. It does not travel promptly to the interior of the cells and needs a carrier to serve the purpose. Here, we have demonstrated, by fluorescence lifetime imaging spectroscopy (FLIM) and resonance energy transfer (RET) phenomenon, that ultrasmall graphene quantum dots (GQDs) can be internalized into the aqueous pool of giant unilamellar vesicles (GUVs) made from dipalmitoylphosphatidylcholine (DPPC) lipids, which, in turn, help in fast translocation of DN through the membrane without any delivery vehicle.
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Affiliation(s)
- Riya Sinha
- Department of Chemical Sciences and Centre for Advanced Functional Materials (CAFM), Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur 741246, WB, India
| | - Arunavo Chatterjee
- Department of Chemical Sciences and Centre for Advanced Functional Materials (CAFM), Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur 741246, WB, India
| | - Pradipta Purkayastha
- Department of Chemical Sciences and Centre for Advanced Functional Materials (CAFM), Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur 741246, WB, India
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6
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Miller LN, Blake MJ, Page EF, Castillo HB, Calhoun TR. Phosphate Ions Alter the Binding of Daptomycin to Living Bacterial Cell Surfaces. ACS Infect Dis 2021; 7:3088-3095. [PMID: 34605244 DOI: 10.1021/acsinfecdis.1c00397] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Advancements in antibiotic drug design are often hindered by missing information on how these small molecules interact with living cells. The antibiotic, daptomycin, has found clinical success and an emerging resistance, but a comprehensive picture of its mechanism of action has remained elusive. Using a surface-specific spectroscopy technique, second harmonic generation, we are able to quantitatively assess the binding of daptomycin to living cell membranes without the addition of exogenous labels. Our results reveal similar binding affinities for both Gram-positive and Gram-negative bacteria studied, including Escherichia coli. More importantly, we show that the presence of phosphate ions influences the binding of daptomycin to the Gram-positive bacterium Enterococcus faecalis. The role of environmental phosphate has not previously been considered in any proposed mechanism, and its implications are expected to be important in vivo.
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Affiliation(s)
- Lindsey N. Miller
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee 37996, United States
| | - Marea J. Blake
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee 37996, United States
| | - Eleanor F. Page
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee 37996, United States
| | - Hannah B. Castillo
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee 37996, United States
| | - Tessa R. Calhoun
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee 37996, United States
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7
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Zhou Y, Bielec K, Pasitsuparoad P, Hołyst R. Single-molecule brightness analysis for the determination of anticancer drug interactions with DNA. Analyst 2020; 145:6600-6606. [PMID: 32785299 DOI: 10.1039/d0an01108h] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Anthracyclines are one of the most studied anticancer drugs approved for medical treatment. The equilibrium constant (K) of the reaction between these drugs with DNA in both in vitro and in vivo experiments lacks consensus. The K values vary from 104 up to 108 M-1, which suggest a 1000-fold error in determining the effective concentration needed to form the drug-DNA complex. Until 2014, only one study by García [J. Phys. Chem. B, 2014, 118, 1288-1295] showed that the binding of anthracycline representative doxorubicin occurs in two reactions. We support this result by brightness analysis at a single molecular level for the four most common anthracyclines: doxorubicin, daunorubicin, epirubicin, and idarubicin.
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Affiliation(s)
- Ying Zhou
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland.
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8
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Miller LN, Brewer WT, Williams JD, Fozo EM, Calhoun TR. Second Harmonic Generation Spectroscopy of Membrane Probe Dynamics in Gram-Positive Bacteria. Biophys J 2019; 117:1419-1428. [PMID: 31586521 DOI: 10.1016/j.bpj.2019.09.014] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2019] [Revised: 09/11/2019] [Accepted: 09/13/2019] [Indexed: 11/17/2022] Open
Abstract
Bacterial membranes are complex mixtures with dispersity that is dynamic over scales of both space and time. To capture adsorption onto and transport within these mixtures, we conduct simultaneous second harmonic generation (SHG) and two-photon fluorescence measurements on two different gram-positive bacterial species as the cells uptake membrane-specific probe molecules. Our results show that SHG not only can monitor the movement of small molecules across membrane leaflets but also is sensitive to higher-level ordering of the molecules within the membrane. Further, we show that the membranes of Staphylococcus aureus remain more dynamic after longer times at room temperature in comparison to Enterococcus faecalis. Our findings provide insight into the variability of activities seen between structurally similar molecules in gram-positive bacteria while also demonstrating the power of SHG to examine these dynamics.
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Affiliation(s)
- Lindsey N Miller
- Department of Chemistry, University of Tennesseee, Knoxville, Tennessee
| | - William T Brewer
- Department of Microbiology, University of Tennesseee, Knoxville, Tennessee
| | - Julia D Williams
- Department of Microbiology, University of Tennesseee, Knoxville, Tennessee
| | - Elizabeth M Fozo
- Department of Microbiology, University of Tennesseee, Knoxville, Tennessee
| | - Tessa R Calhoun
- Department of Chemistry, University of Tennesseee, Knoxville, Tennessee.
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9
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Sass S, Stöcklein WFM, Klevesath A, Hurpin J, Menger M, Hille C. Binding affinity data of DNA aptamers for therapeutic anthracyclines from microscale thermophoresis and surface plasmon resonance spectroscopy. Analyst 2019; 144:6064-6073. [PMID: 31528891 DOI: 10.1039/c9an01247h] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Anthracyclines like daunorubicin (DRN) and doxorubicin (DOX) play an undisputed key role in cancer treatment, but their chronic administration can cause severe side effects. For precise anthracycline analytical systems, aptamers are preferable recognition elements. Here, we describe the detailed characterisation of a single-stranded DNA aptamer DRN-10 and its truncated versions for DOX and DRN detection. Binding affinities were determined from surface plasmon resonance (SPR) and microscale thermophoresis (MST) and combined with conformational data from circular dichroism (CD). Both aptamers displayed similar nanomolar binding affinities to DRN and DOX, even though their rate constants differed as shown by SPR recordings. SPR kinetic data unravelled a two-state reaction model including a 1 : 1 binding and a subsequent conformational change of the binding complex. This model was supported by CD spectra. In addition, the dissociation constants determined with MST were always lower than that from SPR, and especially for the truncated aptamer they differed by two orders of magnitude. This most probably reflects the methodological difference, namely labelling for MST vs. immobilisation for SPR. From CD recordings, we suggested a specific G-quadruplex as structural basis for anthracycline binding. We concluded that the aptamer DRN-10 is a promising recognition element for anthracycline detection systems and further selected aptamers can be also characterised with the combined methodological approach presented here.
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Affiliation(s)
- Stephan Sass
- Physical Chemistry/ALS ComBi, Institute of Chemistry, University of Potsdam, 14476 Potsdam, Germany
| | - Walter F M Stöcklein
- Fraunhofer Institute for Cell Therapy and Immunology, Branch Bioanalysis and Bioprocesses (IZI-BB), 14476 Potsdam, Germany.
| | - Anja Klevesath
- Fraunhofer Institute for Cell Therapy and Immunology, Branch Bioanalysis and Bioprocesses (IZI-BB), 14476 Potsdam, Germany.
| | - Jeanne Hurpin
- Physical Chemistry/ALS ComBi, Institute of Chemistry, University of Potsdam, 14476 Potsdam, Germany
| | - Marcus Menger
- Fraunhofer Institute for Cell Therapy and Immunology, Branch Bioanalysis and Bioprocesses (IZI-BB), 14476 Potsdam, Germany.
| | - Carsten Hille
- Physical Chemistry/ALS ComBi, Institute of Chemistry, University of Potsdam, 14476 Potsdam, Germany.,Technical University of Applied Sciences Wildau, 15745 Wildau, Germany.
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10
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Hou Y, Chen SL, Gan W, Ma X, Yuan Q. Understanding the Dynamic Behavior of an Anticancer Drug, Doxorubicin, on a Lipid Membrane Using Multiple Spectroscopic Techniques. J Phys Chem B 2019; 123:3756-3762. [PMID: 30983340 DOI: 10.1021/acs.jpcb.9b01941] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
The interaction, including the adsorption and embedding, of a widely applied anticancer drug, doxorubicin, with a lipid membrane was investigated. Second harmonic generation and two photon fluorescence were used as a powerful combination capable in revealing this dynamic process at the interface. The adsorption, association, deassociation and embedding of doxorubicin on the lipid membrane were clearly identified based on the consistency in the dynamic parameters revealed by the time dependent second harmonic generation and two-photon fluorescence measurements. This work also presents a new approach for in situ measurement of the adsorption density of doxorubicin on lipid membrane, benefiting from the two-photon fluorescence signal of doxorubicin being significantly altered by its chemical environment. The analysis of the location and molecular density based on the fluorescent efficiency of the chromophores makes the fluorescence measurement a "surface sensitive" technique as well. The analytical procedures used in this work are expected to aid in understanding the interaction between fluorescent molecules and lipid membranes in general.
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Affiliation(s)
- Yi Hou
- State Key Laboratory of Advanced Welding and Joining, and School of Science , Harbin Institute of Technology (Shenzhen) , University Town, Shenzhen 518055 , Guangdong China
| | - Shun-Li Chen
- State Key Laboratory of Advanced Welding and Joining, and School of Science , Harbin Institute of Technology (Shenzhen) , University Town, Shenzhen 518055 , Guangdong China
| | - Wei Gan
- State Key Laboratory of Advanced Welding and Joining, and School of Science , Harbin Institute of Technology (Shenzhen) , University Town, Shenzhen 518055 , Guangdong China
| | - Xing Ma
- State Key Laboratory of Advanced Welding and Joining, and School of Materials Science and Engineering , Harbin Institute of Technology (Shenzhen) , University Town, Shenzhen 518055 , Guangdong China
| | - Qunhui Yuan
- State Key Laboratory of Advanced Welding and Joining, and School of Materials Science and Engineering , Harbin Institute of Technology (Shenzhen) , University Town, Shenzhen 518055 , Guangdong China
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11
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Jia H, Tsai TW, Xu S. Probing drug-DNA interactions using super-resolution force spectroscopy. APPLIED PHYSICS LETTERS 2018; 113:193702. [PMID: 30473584 PMCID: PMC6219894 DOI: 10.1063/1.5045787] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2018] [Accepted: 10/06/2018] [Indexed: 06/09/2023]
Abstract
Atomic magnetometry and ultrasound, as individual techniques, have been used extensively in various physical, chemical, and biomedical fields. Their combined application, however, has been rare. We report that super-resolution force spectroscopy, which is based on the integration of the two techniques, can find unique biophysical applications in studying drug-DNA interactions. The precisely controlled ultrasound generates acoustic radiation force on the biological systems labeled with magnetic microparticles. A decrease in the magnetic signal, measured by an automated atomic magnetometer, indicates that the acoustic radiation force equals the binding force of the biological system. With 0.5 pN force resolution, we were able to precisely resolve three small molecules binding with two DNA sequences and quantitatively reveal the effect of a single hydrogen bond. Our results indicate that the increases in DNA binding force caused by drug binding correlate with the enthalpy instead of free energy, thus providing an alternative physical parameter for optimizing chemotherapeutic drugs.
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Affiliation(s)
| | | | - Shoujun Xu
- Author to whom correspondence should be addressed:
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12
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Abu-Laban M, Kumal RR, Casey J, Becca J, LaMaster D, Pacheco CN, Sykes DG, Jensen L, Haber LH, Hayes DJ. Comparison of thermally actuated retro-diels-alder release groups for nanoparticle based nucleic acid delivery. J Colloid Interface Sci 2018; 526:312-321. [PMID: 29751265 DOI: 10.1016/j.jcis.2018.04.085] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2018] [Revised: 04/03/2018] [Accepted: 04/23/2018] [Indexed: 12/18/2022]
Abstract
The present study explores alternate pericyclic chemistries for tethering amine-terminal biomolecules onto silver nanoparticles. Employing the versatile tool of the retro-Diels-Alder (rDA) reaction, three thermally-labile cycloadducts are constructed that cleave at variable temperature ranges. While the reaction between furan and maleimide has widely been reported, the current study also evaluates the reverse reaction kinetics between thiophene-maleimide, and pyrrole-maleimide cycloadducts. Density Functional Theorem (DFT) calculations used to model and plan the experiments, predict energy barriers for the thiophene-maleimide reverse reaction to be greatest, and the pyrrole-maleimide barriers the lowest. Based on the computational analyses, it is projected that the cycloreversion rate would occur slowest with the thiophene, followed by furan, and finally pyrrole would yield the promptest release. These thermally-responsive linkers, characterized by Electrospray Ionization Mass Spectrometry, 1H and 13C NMR, are thiol-linked to silver nanoparticles and conjugate single stranded siRNA mimics with 5' fluorescein tag. Second harmonic generation spectroscopy (SHG) and fluorescence spectroscopy are used to measure release and rate of release. The SHG decay constants and fluorescence release profiles obtained for the three rDA reactions confirm the trends obtained from the DFT computations.
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Affiliation(s)
- Mohammad Abu-Laban
- The Department of Biomedical Engineering, The Pennsylvania State University, University Park, PA 16802, United States.
| | - Raju R Kumal
- The Department of Chemistry, Louisiana State University, Baton Rouge, LA 70803, United States.
| | - Jonathan Casey
- The Department of Biomedical Engineering, The Pennsylvania State University, University Park, PA 16802, United States.
| | - Jeff Becca
- The Department of Chemistry, The Pennsylvania State University, University Park, PA 16802, United States.
| | - Daniel LaMaster
- The Department of Chemistry, Louisiana State University, Baton Rouge, LA 70803, United States.
| | - Carlos N Pacheco
- The Department of Chemistry, The Pennsylvania State University, University Park, PA 16802, United States; The NMR Facility, The Pennsylvania State University, University Park, PA 16802, United States.
| | - Dan G Sykes
- The Department of Chemistry, The Pennsylvania State University, University Park, PA 16802, United States.
| | - Lasse Jensen
- The Department of Chemistry, The Pennsylvania State University, University Park, PA 16802, United States.
| | - Louis H Haber
- The Department of Chemistry, Louisiana State University, Baton Rouge, LA 70803, United States.
| | - Daniel J Hayes
- The Department of Biomedical Engineering, The Pennsylvania State University, University Park, PA 16802, United States; Materials Research Institute, Materials Characterization Lab, Millennium Science Complex, The Pennsylvania State University, University Park, PA 16802, United States; The Huck Institute of the Life Sciences, Millennium Science Complex, The Pennsylvania State University, University Park, PA 16802, United States.
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13
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Liu MC, Liu B, Chen XL, Lin HC, Sun XY, Lu JZ, Li YY, Yan SQ, Zhang LY, Zhao P. Calcium carbonate end-capped, folate-mediated Fe 3O 4@mSiO 2 core-shell nanocarriers as targeted controlled-release drug delivery system. J Biomater Appl 2018; 32:1090-1104. [PMID: 29357775 DOI: 10.1177/0885328217752994] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Magnetic mesoporous silica nanospheres (MMSN) were prepared and the surface was modified with cancer cell-specific ligand folic acid. Calcium carbonate was then employed as acid-activated gatekeepers to cap the mesopores of the MMSN, namely, MMSN-FA-CaCO3. The formation of the MMSN-FA-CaCO3 was proved by several characterization techniques, viz. transmission electron microscopy, zeta potential measurement, Fourier transform infrared spectroscopy, BET surface area measurement, and UV-Vis spectroscopy. Daunomycin was successfully loaded in the MMSN-FA-CaCO3 and the system exhibited sensitive pH stimuli-responsive release characteristics under blood or tumor microenvironment. Cellular uptake by folate receptor (FR)-overexpressing HeLa cells of the MMSN-FA-CaCO3 was higher than that by non-folated-conjugated ones. Intracellular-uptake studies revealed preferential uptake of these nanoparticles into FR-positive [FR(+)] HeLa than FR-negative [FR(-)]A549 cell lines. DAPI stain experiment showed high apoptotic rate of MMSN-FA-DNM-CaCO3 to HeLa cells. The present data suggest that the CaCO3 coating and folic acid modification of MMSN are able to create a targeted, pH-sensitive template for drug delivery system with application in cancer therapy.
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Affiliation(s)
- Min-Chao Liu
- 1 School of Chemistry and Chemical Engineering, Guangdong Pharmaceutical University, Guangzhou, China
| | - Bing Liu
- 2 School of Pharmacy, Guangdong Pharmaceutical University, Guangzhou, China
| | - Xian-Li Chen
- 3 Medical College of Shaoguan University, Guangdong, China
| | - Hui-Chao Lin
- 1 School of Chemistry and Chemical Engineering, Guangdong Pharmaceutical University, Guangzhou, China
| | - Xiang-Yu Sun
- 1 School of Chemistry and Chemical Engineering, Guangdong Pharmaceutical University, Guangzhou, China
| | - Jia-Zheng Lu
- 2 School of Pharmacy, Guangdong Pharmaceutical University, Guangzhou, China
| | - Yan-Yu Li
- 1 School of Chemistry and Chemical Engineering, Guangdong Pharmaceutical University, Guangzhou, China
| | - Si-Qi Yan
- 1 School of Chemistry and Chemical Engineering, Guangdong Pharmaceutical University, Guangzhou, China
| | - Lu-Yong Zhang
- 2 School of Pharmacy, Guangdong Pharmaceutical University, Guangzhou, China
| | - Ping Zhao
- 1 School of Chemistry and Chemical Engineering, Guangdong Pharmaceutical University, Guangzhou, China
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14
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Kim JH. Two-step adsorption kinetics of malachite green on anionic polystyrene microspheres in aqueous solution probed by second harmonic generation. Phys Chem Chem Phys 2017; 19:21887-21892. [PMID: 28787062 DOI: 10.1039/c7cp03088f] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Adsorption of organic cations of malachite green (MG) on an anionic microsphere surface was monitored in real time using a surface-specific second-harmonic generation (SHG) technique. This adsorption was found to consist of two processes of different timescales for all MG concentrations, which has not been considered in previous SHG experiments. The two-step adsorption can be well explained by our suggested model, which consists of an initial fast electrostatic alignment of weakly bound MG followed by slow non-electrostatic adsorption of MG on the surface of a microsphere. This study shows the importance of kinetics measurements in providing full understanding of adsorption of charged molecules on colloid surfaces.
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Affiliation(s)
- Joon Heon Kim
- Advanced Photonics Research Institute, Gwangju Institute of Science and Technology, Gwangju 61005, Republic of Korea.
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15
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Tran RJ, Sly KL, Conboy JC. Applications of Surface Second Harmonic Generation in Biological Sensing. ANNUAL REVIEW OF ANALYTICAL CHEMISTRY (PALO ALTO, CALIF.) 2017; 10:387-414. [PMID: 28301745 DOI: 10.1146/annurev-anchem-071015-041453] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Surface second harmonic generation (SHG) is a coherent, nonlinear optical technique that is well suited for investigations of biomolecular interactions at interfaces. SHG is surface specific due to the intrinsic symmetry constraints on the nonlinear process, providing a distinct analytical advantage over linear spectroscopic methods, such as fluorescence and UV-Visible absorbance spectroscopies. SHG has the ability to detect low concentrations of analytes, such as proteins, peptides, and small molecules, due to its high sensitivity, and the second harmonic response can be enhanced through the use of target molecules that are resonant with the incident (ω) and/or second harmonic (2ω) frequencies. This review describes the theoretical background of SHG, and then it discusses its sensitivity, limit of detection, and the implementation of the method. It also encompasses the applications of surface SHG directed at the study of protein-surface, small-molecule-surface, and nanoparticle-membrane interactions, as well as molecular chirality, imaging, and immunoassays. The versatility, high sensitivity, and surface specificity of SHG show great potential for developments in biosensors and bioassays.
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Affiliation(s)
- Renee J Tran
- Department of Chemistry, University of Utah, Salt Lake City, Utah 84112;
| | - Krystal L Sly
- Department of Chemistry, University of Utah, Salt Lake City, Utah 84112;
| | - John C Conboy
- Department of Chemistry, University of Utah, Salt Lake City, Utah 84112;
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16
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Voylov DN, Holt AP, Doughty B, Bocharova V, Meyer HM, Cheng S, Martin H, Dadmun M, Kisliuk A, Sokolov AP. Unraveling the Molecular Weight Dependence of Interfacial Interactions in Poly(2-vinylpyridine)/Silica Nanocomposites. ACS Macro Lett 2017; 6:68-72. [PMID: 35632893 DOI: 10.1021/acsmacrolett.6b00915] [Citation(s) in RCA: 52] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
The structure and polymer-nanoparticle interactions among physically adsorbed poly(2-vinylpyridine) chains on the surface of silica nanoparticles (NPs) were systematically studied as a function of molecular weight (MW) by sum frequency generation (SFG) and X-ray photoelectron (XPS) spectroscopies. Analysis of XPS data identified hydrogen bonds between the polymer and NPs, while SFG evaluated the change in the number of free OH sites on the NP's surface. Our data revealed that the hydrogen bonds and amount of the free -OH sites have a significant dependence on the polymer's MW. These results provide clear experimental evidence that the interaction of physically adsorbed chains with nanoparticles is strongly MW dependent and aids in unraveling the microscopic mechanism responsible for the strong MW dependence of dynamics of the interfacial layer in polymer nanocomposites.
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Affiliation(s)
- Dmitry N. Voylov
- Department of Chemistry and ‡Department of Physics and Astronomy, University of Tennessee, Knoxville, Tennessee 37916-1600, United States
- Chemical Sciences Division and ∥Materials Science
and Technology Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37830, United States
| | - Adam P. Holt
- Department of Chemistry and ‡Department of Physics and Astronomy, University of Tennessee, Knoxville, Tennessee 37916-1600, United States
- Chemical Sciences Division and ∥Materials Science
and Technology Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37830, United States
| | - Benjamin Doughty
- Department of Chemistry and ‡Department of Physics and Astronomy, University of Tennessee, Knoxville, Tennessee 37916-1600, United States
- Chemical Sciences Division and ∥Materials Science
and Technology Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37830, United States
| | - Vera Bocharova
- Department of Chemistry and ‡Department of Physics and Astronomy, University of Tennessee, Knoxville, Tennessee 37916-1600, United States
- Chemical Sciences Division and ∥Materials Science
and Technology Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37830, United States
| | - Harry M. Meyer
- Department of Chemistry and ‡Department of Physics and Astronomy, University of Tennessee, Knoxville, Tennessee 37916-1600, United States
- Chemical Sciences Division and ∥Materials Science
and Technology Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37830, United States
| | - Shiwang Cheng
- Department of Chemistry and ‡Department of Physics and Astronomy, University of Tennessee, Knoxville, Tennessee 37916-1600, United States
- Chemical Sciences Division and ∥Materials Science
and Technology Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37830, United States
| | - Halie Martin
- Department of Chemistry and ‡Department of Physics and Astronomy, University of Tennessee, Knoxville, Tennessee 37916-1600, United States
- Chemical Sciences Division and ∥Materials Science
and Technology Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37830, United States
| | - Mark Dadmun
- Department of Chemistry and ‡Department of Physics and Astronomy, University of Tennessee, Knoxville, Tennessee 37916-1600, United States
- Chemical Sciences Division and ∥Materials Science
and Technology Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37830, United States
| | - Alexander Kisliuk
- Department of Chemistry and ‡Department of Physics and Astronomy, University of Tennessee, Knoxville, Tennessee 37916-1600, United States
- Chemical Sciences Division and ∥Materials Science
and Technology Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37830, United States
| | - Alexei P. Sokolov
- Department of Chemistry and ‡Department of Physics and Astronomy, University of Tennessee, Knoxville, Tennessee 37916-1600, United States
- Chemical Sciences Division and ∥Materials Science
and Technology Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37830, United States
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17
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Lis D, Cecchet F. Unique Vibrational Features as a Direct Probe of Specific Antigen-Antibody Recognition at the Surface of a Solid-Supported Hybrid Lipid Bilayer. Chemphyschem 2016; 17:2645-9. [PMID: 27324112 DOI: 10.1002/cphc.201600419] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2016] [Indexed: 11/09/2022]
Abstract
Here, we demonstrate how sum frequency generation (SFG), a vibrational spectroscopy based on a nonlinear three-photon mixing process, may provide a direct and unique fingerprint of bio-recognition; This latter can be detected with an intrinsically discriminating unspecific adsorption, thanks to the high sensitivity of the second-order nonlinear optical (NLO) response to preferential molecular orientation and symmetry properties. As a proof of concept, we have detected the biological event at the solid/liquid interface of a model bio-active antigen platform, based on a solid-supported hybrid lipid bilayer (ss-HLB) of a 2,4-dinitrophenyl (DNP) lipid, towards a monoclonal mouse anti-DNP complementary antibody.
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Affiliation(s)
- Dan Lis
- Research Centre in Physics of Matter and Radiation (PMR), Namur Research Institute for LIfe Sciences (NARILIS), University of Namur (UNamur), 61 rue de Bruxelles, 5000, Namur, Belgium
| | - Francesca Cecchet
- Research Centre in Physics of Matter and Radiation (PMR), Namur Research Institute for LIfe Sciences (NARILIS), University of Namur (UNamur), 61 rue de Bruxelles, 5000, Namur, Belgium.
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18
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Doughty B, Yin P, Ma YZ. Adsorption, Ordering, and Local Environments of Surfactant-Encapsulated Polyoxometalate Ions Probed at the Air-Water Interface. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2016; 32:8116-22. [PMID: 27452922 DOI: 10.1021/acs.langmuir.6b01643] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
The continued development and application of surfactant-encapsulated polyoxometalates (SEPs) relies on understanding the ordering and organization of species at their interface and how these are impacted by the various local environments to which they are exposed. Here, we report on the equilibrium properties of two common SEPs adsorbed to the air-water interface and probed with surface-specific vibrational sum-frequency generation (SFG) spectroscopy. These results reveal clear shifts in vibrational band positions, the magnitude of which scales with the charge of the SEP core, which is indicative of a static field effect on the surfactant coating and the associated local chemical environment. This static field also induces ordering in surrounding water molecules that is mediated by charge screening via the surface-bound surfactants. From these SFG measurements, we are able to show that Mo132-based SEPs are more polar than Mo72V30 SEPs. Disorder in the surfactant chain packing at the highly curved SEP surfaces is attributed to large conic volumes that can be sampled without interactions with neighboring chains. Measurements of adsorption isotherms yield free energies of adsorption to the air-water interface of -46.8 ± 0.4 and -44.8 ± 1.2 kJ/mol for the Mo132 and Mo72V30 SEPs, respectively, indicating a strong propensity for the fluid surface. The influence of intermolecular interactions on the surface adsorption energies is discussed.
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Affiliation(s)
- Benjamin Doughty
- Chemical Sciences Division, ‡Chemical and Engineering Materials Division, Neutron Sciences Directorate, and §Shull Wollan Center, Neutron Sciences Directorate, Oak Ridge National Laboratory , Oak Ridge, Tennessee 37831, United States
| | - Panchao Yin
- Chemical Sciences Division, ‡Chemical and Engineering Materials Division, Neutron Sciences Directorate, and §Shull Wollan Center, Neutron Sciences Directorate, Oak Ridge National Laboratory , Oak Ridge, Tennessee 37831, United States
| | - Ying-Zhong Ma
- Chemical Sciences Division, ‡Chemical and Engineering Materials Division, Neutron Sciences Directorate, and §Shull Wollan Center, Neutron Sciences Directorate, Oak Ridge National Laboratory , Oak Ridge, Tennessee 37831, United States
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19
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Liu MC, Jin SF, Zheng M, Wang Y, Zhao PL, Tang DT, Chen J, Lin JQ, Wang XH, Zhao P. Daunomycin-loaded superparamagnetic iron oxide nanoparticles: Preparation, magnetic targeting, cell cytotoxicity, and protein delivery research. J Biomater Appl 2016; 31:261-72. [PMID: 27288463 DOI: 10.1177/0885328216654425] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
The clinical use of daunomycin is restricted by dose-dependent toxicity and low specificity against cancer cells. In the present study, modified superparamagnetic iron oxide nanoparticles were employed to load daunomycin and the drug-loaded nanospheres exhibited satisfactory size and smart pH-responsive release. The cellular uptake efficiency, targeted cell accumulation, and cell cytotoxicity experimental results proved that the superparamagnetic iron oxide nanoparticle-loading process brings high drug targeting without decreasing the cytotoxicity of daunomycin. Moreover, a new concern for the evaluation of nanophase drug delivery's effects was considered, with monitoring the interactions between human serum albumin and the drug-loaded nanospheres. Results from the multispectroscopic techniques and molecular modeling calculation elucidate that the drug delivery has detectable deleterious effects on the frame conformation of protein, which may affect its physiological function.
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Affiliation(s)
- Min-Chao Liu
- School of Chemistry and Chemical Engineering, Guangdong Pharmaceutical University, Guangzhou, PR China
| | - Shu-Fang Jin
- School of Chemistry and Chemical Engineering, Guangdong Pharmaceutical University, Guangzhou, PR China
| | - Min Zheng
- School of Basic, Guangdong Pharmaceutical University, Guangzhou, PR China
| | - Yan Wang
- School of Chemistry and Chemical Engineering, Guangdong Pharmaceutical University, Guangzhou, PR China
| | - Peng-Liang Zhao
- School of Chemistry and Chemical Engineering, Guangdong Pharmaceutical University, Guangzhou, PR China
| | - Ding-Tong Tang
- School of Chemistry and Chemical Engineering, Guangdong Pharmaceutical University, Guangzhou, PR China
| | - Jiong Chen
- School of Chemistry and Chemical Engineering, Guangdong Pharmaceutical University, Guangzhou, PR China
| | - Jia-Qi Lin
- School of Chemistry and Chemical Engineering, Guangdong Pharmaceutical University, Guangzhou, PR China
| | - Xia-Hong Wang
- School of Chemistry and Chemical Engineering, Guangdong Pharmaceutical University, Guangzhou, PR China
| | - Ping Zhao
- School of Chemistry and Chemical Engineering, Guangdong Pharmaceutical University, Guangzhou, PR China
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20
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Sugawara K, Kadoya T, Kuramitz H. Monitoring of the interaction between U937 cells and electroactive daunomycin with an arginine-rich peptide. Bioelectrochemistry 2015; 105:95-102. [DOI: 10.1016/j.bioelechem.2015.05.012] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2015] [Revised: 05/18/2015] [Accepted: 05/18/2015] [Indexed: 12/27/2022]
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21
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Huang S, Zhu F, Xiao Q, Liang Y, Zhou Q, Su W. Thermodynamic investigation of the interaction between the [(η6-p-cymene)Ru(benzaldehyde-N4-phenylthiosemicarbazone)Cl]Cl anticancer drug and ctDNA: multispectroscopic and electrochemical studies. RSC Adv 2015. [DOI: 10.1039/c5ra03979g] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022] Open
Abstract
The interaction between the [(η6-p-cymene)Ru(benzaldehyde-N4-phenylthiosemicarbazone)Cl]Cl anticancer drug and ctDNA was systematically investigated by multispectroscopic and electrochemical studies.
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Affiliation(s)
- Shan Huang
- College of Chemistry and Material Science
- Guangxi Teachers Education University
- Nanning 530001
- P. R. China
| | - Fawei Zhu
- College of Chemistry and Material Science
- Guangxi Teachers Education University
- Nanning 530001
- P. R. China
| | - Qi Xiao
- College of Chemistry and Material Science
- Guangxi Teachers Education University
- Nanning 530001
- P. R. China
| | - Yu Liang
- College of Chemistry and Material Science
- Guangxi Teachers Education University
- Nanning 530001
- P. R. China
| | - Quan Zhou
- College of Chemistry and Material Science
- Guangxi Teachers Education University
- Nanning 530001
- P. R. China
| | - Wei Su
- College of Chemistry and Material Science
- Guangxi Teachers Education University
- Nanning 530001
- P. R. China
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22
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Li Z, Weeraman CN, Azam MS, Osman E, Gibbs-Davis JM. The thermal reorganization of DNA immobilized at the silica/buffer interface: a vibrational sum frequency generation investigation. Phys Chem Chem Phys 2015; 17:12452-7. [DOI: 10.1039/c5cp00781j] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
Vibrational SFG reveals that C–H stretches associated with the nucleobase rather than the phosphate-sugar backbone are most sensitive to DNA duplex “melting” at the silica/buffer interface.
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Affiliation(s)
- Zhiguo Li
- Department of Chemistry
- University of Alberta
- Edmonton
- Canada
| | | | | | - Eiman Osman
- Department of Chemistry
- University of Alberta
- Edmonton
- Canada
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23
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Hu Q, Xu S. Sequence and Chiral Selectivity of Drug-DNA Interactions Revealed by Force Spectroscopy. Angew Chem Int Ed Engl 2014. [DOI: 10.1002/ange.201407093] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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24
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Hu Q, Xu S. Sequence and Chiral Selectivity of Drug-DNA Interactions Revealed by Force Spectroscopy. Angew Chem Int Ed Engl 2014; 53:14135-8. [DOI: 10.1002/anie.201407093] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2014] [Indexed: 01/25/2023]
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25
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Huang S, Zhu F, Qiu H, Xiao Q, Zhou Q, Su W, Hu B. A sensitive quantum dots-based "OFF-ON" fluorescent sensor for ruthenium anticancer drugs and ctDNA. Colloids Surf B Biointerfaces 2014; 117:240-7. [PMID: 24657609 DOI: 10.1016/j.colsurfb.2014.02.031] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2013] [Revised: 02/17/2014] [Accepted: 02/19/2014] [Indexed: 12/11/2022]
Abstract
In this contribution, a simple and sensitive fluorescent sensor for the determination of both the three ruthenium anticancer drugs (1 to 3) and calf thymus DNA (ctDNA) was established based on the CdTe quantum dots (QDs) fluorescence "OFF-ON" mode. Under the experimental conditions, the fluorescence of CdTe QDs can be effectively quenched by ruthenium anticancer drugs because of the surface binding of these drugs on CdTe QDs and the subsequent photoinduced electron transfer (PET) process from CdTe QDs to ruthenium anticancer drugs, which render the system into fluorescence "OFF" status. The system can then be "ON" after the addition of ctDNA which brought the restoration of CdTe QDs fluorescence intensity, since ruthenium anticancer drugs broke away from the surface of CdTe QDs and inserted into double helix structure of ctDNA. The fluorescence quenching effect of the CdTe QDs-ruthenium anticancer drugs systems was mainly concentration dependent, which could be used to detect three ruthenium anticancer drugs. The limits of detection were 5.5 × 10(-8) M for ruthenium anticancer drug 1, 7.0 × 10(-8) M for ruthenium anticancer drug 2, and 7.9× 10(-8) M for ruthenium anticancer drug 3, respectively. The relative restored fluorescence intensity was directly proportional to the concentration of ctDNA in the range of 1.0 × 10(-8) M ∼ 3.0 × 10(-7) M, with a correlation coefficient (R) of 0.9983 and a limit of detection of 1.1 × 10(-9) M. The relative standard deviation (RSD) for 1.5 × 10(-7) M ctDNA was 1.5% (n = 5). There was almost no interference to some common chemical compounds, nucleotides, amino acids, and proteins. The proposed method was applied to the determination of ctDNA in three synthetic samples with satisfactory results. The possible reaction mechanism of CdTe QDs fluorescence "OFF-ON" was further investigated. This simple and sensitive approach possessed some potential applications in the investigation of interaction between drug molecules and DNA.
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Affiliation(s)
- Shan Huang
- College of Chemistry and Life Science, Guangxi Teachers Education University, Nanning 530001, PR China.
| | - Fawei Zhu
- College of Chemistry and Life Science, Guangxi Teachers Education University, Nanning 530001, PR China
| | - Hangna Qiu
- College of Chemistry and Life Science, Guangxi Teachers Education University, Nanning 530001, PR China
| | - Qi Xiao
- College of Chemistry and Life Science, Guangxi Teachers Education University, Nanning 530001, PR China.
| | - Quan Zhou
- College of Chemistry and Life Science, Guangxi Teachers Education University, Nanning 530001, PR China
| | - Wei Su
- College of Chemistry and Life Science, Guangxi Teachers Education University, Nanning 530001, PR China.
| | - Baoqing Hu
- Key Laboratory of Beibu Gulf Environment Change and Resources Utilization (Guangxi Teachers Education University), Ministry of Education, China
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26
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Liu H, Qiao C, Yang J, Weng J, Zhang X. Self-assembling doxorubicin-prodrug nanoparticles as siRNA drug delivery system for cancer treatment: in vitro and in vivo. J Mater Chem B 2014; 2:5910-5924. [DOI: 10.1039/c4tb00814f] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The DOX-prodrug NPs can complex siRNA in pH 3 citrate buffer and have slight negative charges on the surface of NPs in pH 7.4 PBS.
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Affiliation(s)
- Hongmei Liu
- National Key Laboratory of Biochemical Engineering
- Institute of Process Engineering
- Chinese Academy of Sciences
- Beijing, PR China
- University of Chinese Academy of Sciences
| | - Chenmeng Qiao
- Key Laboratory of Advanced Technologies of Materials
- School of Materials Science and Engineering
- Southwest Jiaotong University
- Chengdu, PR China
| | - Jun Yang
- National Key Laboratory of Biochemical Engineering
- Institute of Process Engineering
- Chinese Academy of Sciences
- Beijing, PR China
| | - Jie Weng
- Key Laboratory of Advanced Technologies of Materials
- School of Materials Science and Engineering
- Southwest Jiaotong University
- Chengdu, PR China
| | - Xin Zhang
- National Key Laboratory of Biochemical Engineering
- Institute of Process Engineering
- Chinese Academy of Sciences
- Beijing, PR China
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27
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Azam MS, Gibbs-Davis JM. Monitoring DNA Hybridization and Thermal Dissociation at the Silica/Water Interface Using Resonantly Enhanced Second Harmonic Generation Spectroscopy. Anal Chem 2013; 85:8031-8. [DOI: 10.1021/ac401009u] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Affiliation(s)
- Md. Shafiul Azam
- Department of Chemistry, University of Alberta, Edmonton, Alberta, Canada
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28
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Probing the relative orientation of molecules bound to DNA through controlled interference using second-harmonic generation. Proc Natl Acad Sci U S A 2013; 110:5756-8. [PMID: 23530200 DOI: 10.1073/pnas.1302554110] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
A method is described in which the interference of radiated second-harmonic electric fields generated by a pair of oriented molecules intercalated into double-stranded DNA is controlled and measured. The results show that the relative molecular orientation of the two molecules significantly changes the magnitude of the observed second-harmonic generation intensity, which is described by a simple model that accounts for the interferences of the radiated fields. The technique presented shows promise for future experiments investigating structural changes induced by the formation of a DNA-biomolecule complex.
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