1
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Deacon-Price C, Changeur L, Santana CS, Garcia AC. The Effect of the Tetraalkylammonium Cation in the Electrochemical CO 2 Reduction Reaction on Copper Electrode. ACS Catal 2024; 14:12928-12939. [PMID: 39263546 PMCID: PMC11385355 DOI: 10.1021/acscatal.4c02297] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2024] [Revised: 07/22/2024] [Accepted: 08/06/2024] [Indexed: 09/13/2024]
Abstract
Aprotic organic solvents such as acetonitrile offer a potential solution to promote electrochemical CO2 reduction over the competing hydrogen evolution reaction. Tetraalkylammonium cations (TAA+) are widely used as supporting electrolytes in organic media due to their high solubility and conductivity. The alkyl chain length of TAA+ cations is known to influence electron transfer processes in electrochemical systems by the adsorption of TAA+, causing modifications of the double layer. In this work, we elucidate the influence of the cation chain length on the mechanism and selectivity of the CO2RR reaction under controlled dry and wet acetonitrile conditions on copper cathodes. We find that the hydrophobic hydration character of the cation, which can be tuned by the chain length, has an effect on product distribution, altering the reaction pathway. Under dry conditions, smaller cations (TEA+) preferentially promote oxalate production via dimerization of the CO2 ·- intermediate, whereas formate is favored in the presence of water via protonation reaction. Larger cations (TBA+ > TPA+ > TEA+) favor the generation of CO regardless of water content. In situ FTIR analysis showed that TBA+ cations are able to stabilize adsorbed CO more effectively than TEA+, explaining why larger cations generate a higher proportion of CO. Our findings also suggest that higher cation concentrations suppress hydrogen evolution, particularly with larger cations, highlighting the role of cation chain length size and hydrophobic hydration shell.
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Affiliation(s)
- Connor Deacon-Price
- Van't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands
| | - Louis Changeur
- Van't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands
| | - Cássia S Santana
- Van't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands
| | - Amanda C Garcia
- Van't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands
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2
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Antalicz B, Bakker HJ. Temperature Effects and Activation Barriers in Aqueous Proton-Uptake Reactions. JACS AU 2024; 4:2995-3006. [PMID: 39211613 PMCID: PMC11350741 DOI: 10.1021/jacsau.4c00326] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/11/2024] [Revised: 07/10/2024] [Accepted: 07/11/2024] [Indexed: 09/04/2024]
Abstract
Aqueous proton transfer reactions are fundamental in biology and chemistry, yet kinetics and mechanisms of strong base-weak acid reactions are not well understood. In this work, we present a temperature-dependent reaction kinetic study of the water-soluble photobase actinoquinol, in the presence and absence of succinimide, a weak acid reaction partner. We study the temperature dependence of the reaction and connect the observed dynamics to the reaction's thermodynamics. We find that actinoquinol reacts in associated complexes with water/succinimide, creating an intermediate complex that can undergo either dissociation to create products, or reverse proton transfer within the complex to recreate the initial reactants. We find that the intermediates' formation is energetically unfavorable with both reaction partners, which impacts the net reaction rates. We also find that the net reaction rate is additionally strongly influenced by the competition between the dissociation of the intermediates and their reverse reaction.
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Affiliation(s)
- Balázs Antalicz
- AMOLF, Ultrafast Spectroscopy, Science Park 104, 1098 XG Amsterdam, The Netherlands
| | - Huib J. Bakker
- AMOLF, Ultrafast Spectroscopy, Science Park 104, 1098 XG Amsterdam, The Netherlands
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3
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Ishraaq R, Akash TS, Bera A, Das S. Hydrophilic and Apolar Hydration in Densely Grafted Cationic Brushes and Counterions with Large Mobilities. J Phys Chem B 2024; 128:381-392. [PMID: 38148252 DOI: 10.1021/acs.jpcb.3c07520] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2023]
Abstract
We employ an all-atom molecular dynamics (MD) simulation framework to unravel water microstructure and ion properties for cationic [poly(2-(methacryloyloxy)ethyl) trimethylammonium chloride] (PMETAC) brushes with chloride ions as counterions. First, we identify locally separate water domains (or first hydration shells) each around {N(CH3)3}+ and the C═O functional groups of the PMETAC chain and one around the Cl- ion. These first hydration shells around the respective moieties overlap, and the extent of the overlap depends on the nature of the species triggering it. Second, despite the overlap, the water molecules in these domains demonstrate disparate properties dictated by the properties of the atoms and groups around which they are located. For example, the presence of the methyl groups makes the {N(CH3)3}+ group trigger apolar hydration as evidenced by the corresponding orientation of the dipole of the water molecules around the {N(CH3)3}+ moiety. These water molecules around the {N(CH3)3}+ group also have enhanced tetrahedrality compared to the water molecules constituting the hydration layer around the C═O group and the Cl- counterion. Our simulations also identify that there is an intervening water layer between the Cl- ion and {N(CH3)3}+ group: this layer prevents the Cl- ion from coming very close to the {N(CH3)3}+ group. As a consequence, there is a significantly large mobility of the Cl- ions inside the PMETAC brush layer. Furthermore, the C═O group of the polyelectrolyte (PE) chain, due to the partial negative charge on the oxygen atom and the specific structure of the PMETAC brush system, demonstrates strongly hydrophilic behavior and enforces a specific dipole response of water molecules analogous to that experienced by water around anionic species of high charge density. In summary, our findings confirm that PMETAC brushes undergo hydrophilic hydration at one site and apolar hydration at another site and ensure large mobility of the supported Cl- counterions.
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Affiliation(s)
- Raashiq Ishraaq
- Department of Mechanical Engineering, University of Maryland, College Park, Maryland 20742, United States
| | - Tanmay Sarkar Akash
- Department of Mechanical Engineering, University of Maryland, College Park, Maryland 20742, United States
| | - Arka Bera
- Department of Mechanical Engineering, University of Maryland, College Park, Maryland 20742, United States
| | - Siddhartha Das
- Department of Mechanical Engineering, University of Maryland, College Park, Maryland 20742, United States
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4
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Kimura Y, Akai R, Shimada K, Hirata M, Fujii K, Endo T. Anomalous Dependence of Translational Diffusion on the Water Mole Fraction for Solute Molecules Dissolved in a 1-Butyl-3-methylimidazolium Tetrafluoroborate/Water Mixture. J Phys Chem B 2023. [PMID: 37310854 DOI: 10.1021/acs.jpcb.3c01978] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Translational diffusion coefficients of carbon monoxide (CO), diphenylacetylene (DPA), and diphenylcyclopropenone (DPCP) were determined in mixtures of 1-butyl-3-methylimidazolium tetrafluoroborate ([C4mim]BF4) and water using transient grating spectroscopy at different mole fractions of water (xw). While DPA exhibited a larger diffusion coefficient than DPCP at low water mole fractions (xw < 0.7), as observed for conventional liquids and ionic liquids (ILs), it was smaller at high mole fractions (xw > 0.9). The apparent molecular radius of DPA determined using the Stokes-Einstein equation at xw > 0.9 is close to the radius of an IL cluster in a water pool as determined from small-angle neutron scattering experiments (J. Bowers et al., Langmuir, 2004, 20, 2192-2198), suggesting that the DPA molecules are trapped in IL clusters in the water pool and move together. The solvation state of DPCP in the mixture was studied using Raman spectroscopy. Dramatically strong water/DPCP hydrogen bonding was observed at higher water mole fractions, suggesting that DPCP is located near the cluster interfaces. The large diffusion coefficient of DPCP suggests that hopping of DPCP between IL clusters occurs through hydrogen bonding with water.
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Affiliation(s)
- Yoshifumi Kimura
- Division of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, 2-1, Tatara Miyakodani, Kyotanabe 610-0321, Kyoto, Japan
- Department of Applied Chemistry, Graduate School of Science and Engineering, Doshisha University, 2-1, Tatara Miyakodani, Kyotanabe-City 610-0321, Kyoto, Japan
| | - Rie Akai
- Division of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, 2-1, Tatara Miyakodani, Kyotanabe 610-0321, Kyoto, Japan
| | - Kohei Shimada
- Department of Applied Chemistry, Graduate School of Science and Engineering, Doshisha University, 2-1, Tatara Miyakodani, Kyotanabe-City 610-0321, Kyoto, Japan
| | - Mizuki Hirata
- Division of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, 2-1, Tatara Miyakodani, Kyotanabe 610-0321, Kyoto, Japan
| | - Kaori Fujii
- Division of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, 2-1, Tatara Miyakodani, Kyotanabe 610-0321, Kyoto, Japan
| | - Takatsugu Endo
- Division of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, 2-1, Tatara Miyakodani, Kyotanabe 610-0321, Kyoto, Japan
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5
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Zavitsas AA. Properties of water solutions. The effective molality. J Mol Liq 2023. [DOI: 10.1016/j.molliq.2023.121717] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/30/2023]
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6
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Yang X, Ji M, Zhang C, Yang X, Xu Z. Physical insight into the entropy-driven ion association. J Comput Chem 2022; 43:1621-1632. [PMID: 35801676 DOI: 10.1002/jcc.26963] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2022] [Revised: 06/15/2022] [Accepted: 06/20/2022] [Indexed: 11/09/2022]
Abstract
The ion association is widely believed to be dominated by the favorable entropy change arising from the release of water molecules from ion hydration shells. However, no direct thermodynamic evidence exists to validate the reliability and suitability of this view. Herein, we employ complicated free energy calculations to rigorously split the free energy including its entropic and enthalpic components into the water-induced contributions and ion-ion interaction terms for several ion pairs from monatomic to polyatomic ions, spanning the size range from small kosmotropes to large chaotropes (Na+ , Cs+ , Ca2+ , F- , I- , CO3 2- , and HPO4 2- ). Our results successfully reveal that though ion associations are indeed determined by a delicate balance between the favorable entropy variation and the repulsive enthalpy change, the entropy gain dominated by the solvent occurs only for the monatomic ion pairing. The water-induced entropic contribution significantly goes against the ion pairing between polyatomic anion and cation, which is, alternatively, dominated by the favorable entropy from the ion-ion interaction term, due to the configurational arrangement of polyatomic anions involved in ion association. The structural and dynamic analysis demonstrates that the entropy penalty from the water phase is primarily ascribed to the enhanced stability of water molecules around the cation imposed by the incoming anion. Our study successfully provides a fundamental understanding of water-mediated ion associations and highlights disparate lengthscale dependencies of the dehydration thermodynamics on the specific types of ions.
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Affiliation(s)
- Xiao Yang
- College of Chemical Engineering, State Key Laboratory of Materials-Oriented Chemical Engineering, Nanjing, China
| | - Mingyu Ji
- College of Chemical Engineering, State Key Laboratory of Materials-Oriented Chemical Engineering, Nanjing, China
| | - Cong Zhang
- College of Chemical Engineering, State Key Laboratory of Materials-Oriented Chemical Engineering, Nanjing, China
| | - Xiaoning Yang
- College of Chemical Engineering, State Key Laboratory of Materials-Oriented Chemical Engineering, Nanjing, China
| | - Zhijun Xu
- College of Chemical Engineering, State Key Laboratory of Materials-Oriented Chemical Engineering, Nanjing, China.,Zhangjiagang Institute of Nanjing Tech University, Zhangjiagang, China
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7
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Pachpinde S, HamsaPriya M, Natarajan U. Molecular dynamics simulations of structure and dynamics in aqueous solution of neutral and ionized derivatives of poly(F): methyl, n-propyl, and isopropyl substitutions. J Mol Model 2022; 28:151. [PMID: 35567722 DOI: 10.1007/s00894-022-05139-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2021] [Accepted: 05/02/2022] [Indexed: 11/26/2022]
Abstract
Chain dimensions, intermolecular structure and hydration of a series of uncharged and cationic poly(vinyl amine) [PVAm] linear polymers having hydrophobic substituent methyl, n-propyl, and isopropyl in the monomer are studied in aqueous solution by molecular dynamics simulations. A conformational transition occurs in the degree of ionization, α, range 0.3 to 0.4. Among the polymers studied, isopropyl substituted PVAm is most hydrophobic and methyl substituted PVAm is the least. The extent of hydrophobicity of the chemical structure is directly correlated to the size of the polymer chain. Conformational dynamics become slower with increase in the degree of charge of the chain and with the size of the substituent side group. The significant hydration of the polymers takes place for 0 ≤ α ≤ 0.5. While the number of H-bonds is not affected significantly by the chemical structure of the chain the relaxation dynamics of polymer-water H-bonds is significantly affected, with the more hydrophobic polymer showing the slowest dynamics. The steric hindrance provided by the hydrophobic substituent groups is responsible for slowing of water orientation dynamics in the vicinity of the polymer. The counter-ion condensation is clearly better and the bound water content is less for the relatively more hydrophobic polymer. The overall behavior of structure and dynamics is in qualitative agreement with that known for other types of polyelectrolytes and solutes in aqueous solution.
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Affiliation(s)
- Sushil Pachpinde
- Macromolecular Modeling and Simulation Lab, Department of Chemical Engineering, Indian Institute of Technology (IIT) Madras, Chennai, 600036, India
| | - M HamsaPriya
- BioSim Lab, Department of Biotechnology, Bhupat and Jyoti Mehta School of Biosciences, Indian Institute of Technology (IIT) Madras, Chennai, 600036, India
| | - Upendra Natarajan
- Macromolecular Modeling and Simulation Lab, Department of Chemical Engineering, Indian Institute of Technology (IIT) Madras, Chennai, 600036, India.
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8
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Wang YL, Li B, Sarman S, Mocci F, Lu ZY, Yuan J, Laaksonen A, Fayer MD. Microstructural and Dynamical Heterogeneities in Ionic Liquids. Chem Rev 2020; 120:5798-5877. [PMID: 32292036 PMCID: PMC7349628 DOI: 10.1021/acs.chemrev.9b00693] [Citation(s) in RCA: 200] [Impact Index Per Article: 50.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2019] [Indexed: 12/11/2022]
Abstract
Ionic liquids (ILs) are a special category of molten salts solely composed of ions with varied molecular symmetry and charge delocalization. The versatility in combining varied cation-anion moieties and in functionalizing ions with different atoms and molecular groups contributes to their peculiar interactions ranging from weak isotropic associations to strong, specific, and anisotropic forces. A delicate interplay among intra- and intermolecular interactions facilitates the formation of heterogeneous microstructures and liquid morphologies, which further contributes to their striking dynamical properties. Microstructural and dynamical heterogeneities of ILs lead to their multifaceted properties described by an inherent designer feature, which makes ILs important candidates for novel solvents, electrolytes, and functional materials in academia and industrial applications. Due to a massive number of combinations of ion pairs with ion species having distinct molecular structures and IL mixtures containing varied molecular solvents, a comprehensive understanding of their hierarchical structural and dynamical quantities is of great significance for a rational selection of ILs with appropriate properties and thereafter advancing their macroscopic functionalities in applications. In this review, we comprehensively trace recent advances in understanding delicate interplay of strong and weak interactions that underpin their complex phase behaviors with a particular emphasis on understanding heterogeneous microstructures and dynamics of ILs in bulk liquids, in mixtures with cosolvents, and in interfacial regions.
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Affiliation(s)
- Yong-Lei Wang
- Department
of Materials and Environmental Chemistry, Arrhenius Laboratory, Stockholm University, SE-106 91 Stockholm, Sweden
| | - Bin Li
- School
of Chemical Engineering and Technology, Sun Yat-sen University, Zhuhai 519082, P. R. China
| | - Sten Sarman
- Department
of Materials and Environmental Chemistry, Arrhenius Laboratory, Stockholm University, SE-106 91 Stockholm, Sweden
| | - Francesca Mocci
- Department
of Chemical and Geological Sciences, University
of Cagliari, I-09042 Monserrato, Italy
| | - Zhong-Yuan Lu
- State
Key Laboratory of Supramolecular Structure and Materials, Institute
of Theoretical Chemistry, Jilin University, Changchun 130021, P. R. China
| | - Jiayin Yuan
- Department
of Materials and Environmental Chemistry, Arrhenius Laboratory, Stockholm University, SE-106 91 Stockholm, Sweden
| | - Aatto Laaksonen
- Department
of Materials and Environmental Chemistry, Arrhenius Laboratory, Stockholm University, SE-106 91 Stockholm, Sweden
- State
Key Laboratory of Materials-Oriented and Chemical Engineering, Nanjing Tech University, Nanjing 210009, P. R. China
- Centre of
Advanced Research in Bionanoconjugates and Biopolymers, Petru Poni Institute of Macromolecular Chemistry Aleea Grigore Ghica-Voda, 41A, 700487 Iasi, Romania
- Department
of Engineering Sciences and Mathematics, Division of Energy Science, Luleå University of Technology, SE-97187 Luleå, Sweden
| | - Michael D. Fayer
- Department
of Chemistry, Stanford University, Stanford, California 94305, United States
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9
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van Dam EP, Giubertoni G, Burla F, Koenderink GH, Bakker HJ. Hyaluronan biopolymers release water upon pH-induced gelation. Phys Chem Chem Phys 2020; 22:8667-8671. [DOI: 10.1039/d0cp00215a] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
We measure the reorientation dynamics of water in hyaluronan solutions, and find that, upon pH-induced gelation, these biopolymers release water.
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Affiliation(s)
| | | | | | - Gijsje H. Koenderink
- AMOLF
- 1098 XG Amsterdam
- The Netherlands
- Department of Bionanoscience
- Kavli Institute of Nanoscience Delft
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10
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Marekha BA, Hunger J. Hydrophobic pattern of alkylated ureas markedly affects water rotation and hydrogen bond dynamics in aqueous solution. Phys Chem Chem Phys 2019; 21:20672-20677. [PMID: 31508638 DOI: 10.1039/c9cp04108g] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Alkylated ureas are frequently used amphiphiles to mediate biomolecule water interactions, yet their hydrophobic substitution pattern critically affects their function. These differences can be traced back to their hydration, which is poorly understood. Here, we investigate subtle effects of the hydrophobic pattern of ureas on hydration dynamics using a combination of linear and non-linear infrared spectroscopies on the OD stretching vibration of HDO. Isomeric 1,3-dimethylurea (1,3-DMU), 1,1-dimethylurea (1,1-DMU) and 1-ethylurea (1-EU) exhibit very similar and rather weak modulation of the water hydrogen-bond strength distribution. Yet, only 1,3-DMU and 1,1-DMU enhance the hydrogen-bond heterogeneity and slow-down its fluctuation dynamics. In turn, rotational dynamics of water molecules, which is dominated by hydrogen bond switches, is significantly impeded in the presence of 1,3-DMU and only weakly by 1,1-DMU and 1-EU. These marked differences can be explained by both excluded volume effects in hydration and self-aggregation, which may be the key to their biotechnological function.
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Affiliation(s)
- Bogdan A Marekha
- Molecular Spectroscopy Department, Max Planck Institute for Polymer Research, Ackermannweg 10, 55128 Mainz, Germany.
| | - Johannes Hunger
- Molecular Spectroscopy Department, Max Planck Institute for Polymer Research, Ackermannweg 10, 55128 Mainz, Germany.
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11
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Biswas A, Priyadarsini A, Mallik BS. Dynamics and Spectral Response of Water Molecules around Tetramethylammonium Cation. J Phys Chem B 2019; 123:8753-8766. [DOI: 10.1021/acs.jpcb.9b05466] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Aritri Biswas
- Department of Chemistry, Indian Institute of Technology Hyderabad, Kandi-502285, Sangareddy, Telangana India
| | - Adyasa Priyadarsini
- Department of Chemistry, Indian Institute of Technology Hyderabad, Kandi-502285, Sangareddy, Telangana India
| | - Bhabani S. Mallik
- Department of Chemistry, Indian Institute of Technology Hyderabad, Kandi-502285, Sangareddy, Telangana India
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12
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Ensing B, Tiwari A, Tros M, Hunger J, Domingos SR, Pérez C, Smits G, Bonn M, Bonn D, Woutersen S. On the origin of the extremely different solubilities of polyethers in water. Nat Commun 2019; 10:2893. [PMID: 31253797 PMCID: PMC6599002 DOI: 10.1038/s41467-019-10783-z] [Citation(s) in RCA: 58] [Impact Index Per Article: 11.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2017] [Accepted: 05/21/2019] [Indexed: 11/09/2022] Open
Abstract
The solubilities of polyethers are surprisingly counter-intuitive. The best-known example is the difference between polyethylene glycol ([-CH2-CH2-O-]n) which is infinitely soluble, and polyoxymethylene ([-CH2-O-]n) which is completely insoluble in water, exactly the opposite of what one expects from the C/O ratios of these molecules. Similar anomalies exist for oligomeric and cyclic polyethers. To solve this apparent mystery, we use femtosecond vibrational and GHz dielectric spectroscopy with complementary ab initio calculations and molecular dynamics simulations. We find that the dynamics of water molecules solvating polyethers is fundamentally different depending on their C/O composition. The ab initio calculations and simulations show that this is not because of steric effects (as is commonly believed), but because the partial charge on the O atoms depends on the number of C atoms by which they are separated. Our results thus show that inductive effects can have a major impact on aqueous solubilities.
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Affiliation(s)
- Bernd Ensing
- Van 't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098XH, Amsterdam, The Netherlands.
| | - Ambuj Tiwari
- Van 't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098XH, Amsterdam, The Netherlands
| | - Martijn Tros
- Van 't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098XH, Amsterdam, The Netherlands
| | - Johannes Hunger
- Max Planck Institute for Polymer Research, Department of Molecular spectroscopy, Ackermannweg 10, 55128, Mainz, Germany.
| | - Sérgio R Domingos
- Deutsches Elektronen-Synchrotron DESY, Notkestraße 85, 22607, Hamburg, Germany
| | - Cristóbal Pérez
- Deutsches Elektronen-Synchrotron DESY, Notkestraße 85, 22607, Hamburg, Germany
| | - Gertien Smits
- Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, 1098XH, Amsterdam, The Netherlands
| | - Mischa Bonn
- Max Planck Institute for Polymer Research, Department of Molecular spectroscopy, Ackermannweg 10, 55128, Mainz, Germany.
| | - Daniel Bonn
- Institute of Physics, University of Amsterdam, Science Park 904, 1098XH, Amsterdam, The Netherlands
| | - Sander Woutersen
- Van 't Hoff Institute for Molecular Sciences, University of Amsterdam, Science Park 904, 1098XH, Amsterdam, The Netherlands.
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13
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Zdrali E, Baer MD, Okur HI, Mundy CJ, Roke S. The Diverse Nature of Ion Speciation at the Nanoscale Hydrophobic/Water Interface. J Phys Chem B 2019; 123:2414-2423. [DOI: 10.1021/acs.jpcb.8b10207] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Evangelia Zdrali
- Laboratory for fundamental BioPhotonics, Institutes of Bioengineering and Materials Science and Engineering, School of Engineering, and Lausanne Centre for Ultrafast Science, École Polytechnique Fédérale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland
| | - Marcel D. Baer
- Physical Sciences Division, Pacific Northwest National Laboratory, Richland, Washington 99354, United States
| | - Halil I. Okur
- Laboratory for fundamental BioPhotonics, Institutes of Bioengineering and Materials Science and Engineering, School of Engineering, and Lausanne Centre for Ultrafast Science, École Polytechnique Fédérale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland
| | - Christopher J. Mundy
- Physical Sciences Division, Pacific Northwest National Laboratory, Richland, Washington 99354, United States
- Department of Chemical Engineering, University of Washington, Seattle, Washington 98195, United States
| | - Sylvie Roke
- Laboratory for fundamental BioPhotonics, Institutes of Bioengineering and Materials Science and Engineering, School of Engineering, and Lausanne Centre for Ultrafast Science, École Polytechnique Fédérale de Lausanne (EPFL), CH-1015 Lausanne, Switzerland
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14
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Zavitsas AA. Quest To Demystify Water: Ideal Solution Behaviors Are Obtained by Adhering to the Equilibrium Mass Action Law. J Phys Chem B 2019; 123:869-883. [DOI: 10.1021/acs.jpcb.8b07166] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Affiliation(s)
- Andreas A. Zavitsas
- Department of Chemistry and Biochemistry, Long Island University, 1 University Plaza, Brooklyn, New York 11201, United States
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15
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16
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Sullivan MR, Yao W, Tang D, Ashbaugh HS, Gibb BC. The Thermodynamics of Anion Complexation to Nonpolar Pockets. J Phys Chem B 2018; 122:1702-1713. [PMID: 29373793 PMCID: PMC10668596 DOI: 10.1021/acs.jpcb.7b12259] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
The interactions between nonpolar surfaces and polarizable anions lie in a gray area between the hydrophobic and Hofmeister effects. To assess the affinity of these interactions, NMR and ITC were used to probe the thermodynamics of eight anions binding to four different hosts whose pockets each consist primarily of hydrocarbon. Two classes of host were examined: cavitands and cyclodextrins. For all hosts, anion affinity was found to follow the Hofmeister series, with associations ranging from 1.6-5.7 kcal mol-1. Despite the fact that cavitand hosts 1 and 2 possess intrinsic negative electrostatic fields, it was determined that these more enveloping hosts generally bound anions more strongly. The observation that the four hosts each possess specific anion affinities that cannot be readily explained by their structures, points to the importance of counter cations and the solvation of the "empty" hosts, free guests, and host-guest complexes, in defining the affinity.
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Affiliation(s)
- Matthew R. Sullivan
- Department of Chemistry, Tulane University, New Orleans, Louisiana 70118, United States
| | - Wei Yao
- Department of Chemistry, Tulane University, New Orleans, Louisiana 70118, United States
| | - Du Tang
- Department of Chemical and Biomolecular Engineering, Tulane University, New Orleans, Louisiana 70118, United States
| | - Henry S Ashbaugh
- Department of Chemical and Biomolecular Engineering, Tulane University, New Orleans, Louisiana 70118, United States
| | - Bruce C. Gibb
- Department of Chemistry, Tulane University, New Orleans, Louisiana 70118, United States
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17
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Yonenaga K, Morita T, Nishikawa K, Koga Y. Effects of ionic liquid constituent cations, tetraalkylammoniums, on water studied by means of the “1-propanol probing methodology”. J Mol Liq 2018. [DOI: 10.1016/j.molliq.2017.12.130] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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18
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Abstract
This review focuses on papers published since 2000 on the topic of the properties of solutes in water. More specifically, it evaluates the state of the art of our understanding of the complex relationship between the shape of a hydrophobe and the hydrophobic effect. To highlight this, we present a selection of references covering both empirical and molecular dynamics studies of small (molecular-scale) solutes. These include empirical studies of small molecules, synthetic hosts, crystalline monolayers, and proteins, as well as in silico investigations of entities such as idealized hard and soft spheres, small solutes, hydrophobic plates, artificial concavity, molecular hosts, carbon nanotubes and spheres, and proteins.
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Affiliation(s)
- Matthew B Hillyer
- Department of Chemistry, Tulane University, New Orleans, Louisiana 70118;
| | - Bruce C Gibb
- Department of Chemistry, Tulane University, New Orleans, Louisiana 70118;
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19
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Moreno-Gómez N, Vargas EF, Buchner R. The effect of alkyl-chain branching on the hydration and ion association of tetrabutylammonium cations. J Mol Liq 2017. [DOI: 10.1016/j.molliq.2017.09.123] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
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20
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Das Mahanta D, Samanta N, Mitra RK. Decisive Role of Hydrophobicity on the Effect of Alkylammonium Chlorides on Protein Stability: A Terahertz Spectroscopic Finding. J Phys Chem B 2017; 121:7777-7785. [DOI: 10.1021/acs.jpcb.7b04088] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Debasish Das Mahanta
- Chemical, Biological and
Macromolecular Sciences, S. N. Bose National Centre for Basic Sciences Block-JD, Sector-III, Salt Lake, Kolkata, 700106, India
| | - Nirnay Samanta
- Chemical, Biological and
Macromolecular Sciences, S. N. Bose National Centre for Basic Sciences Block-JD, Sector-III, Salt Lake, Kolkata, 700106, India
| | - Rajib Kumar Mitra
- Chemical, Biological and
Macromolecular Sciences, S. N. Bose National Centre for Basic Sciences Block-JD, Sector-III, Salt Lake, Kolkata, 700106, India
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21
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Do guanidinium and tetrapropylammonium ions specifically interact with aromatic amino acid side chains? Proc Natl Acad Sci U S A 2017; 114:1003-1008. [PMID: 28096375 DOI: 10.1073/pnas.1618071114] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023] Open
Abstract
Many ions are known to affect the activity, stability, and structural integrity of proteins. Although this effect can be generally attributed to ion-induced changes in forces that govern protein folding, delineating the underlying mechanism of action still remains challenging because it requires assessment of all relevant interactions, such as ion-protein, ion-water, and ion-ion interactions. Herein, we use two unnatural aromatic amino acids and several spectroscopic techniques to examine whether guanidinium chloride, one of the most commonly used protein denaturants, and tetrapropylammonium chloride can specifically interact with aromatic side chains. Our results show that tetrapropylammonium, but not guanidinium, can preferentially accumulate around aromatic residues and that tetrapropylammonium undergoes a transition at ∼1.3 M to form aggregates. We find that similar to ionic micelles, on one hand, such aggregates can disrupt native hydrophobic interactions, and on the other hand, they can promote α-helix formation in certain peptides.
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22
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Koyama A, Fukami K, Imaoka Y, Kitada A, Sakka T, Abe T, Murase K, Kinoshita M. Dynamic manipulation of the local pH within a nanopore triggered by surface-induced phase transition. Phys Chem Chem Phys 2017; 19:16323-16328. [DOI: 10.1039/c7cp01157a] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
Manipulating the local pH within nanopores is essential in nanofluidics technology and its applications.
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Affiliation(s)
- Akira Koyama
- Department of Materials Science and Engineering
- Kyoto University
- Kyoto 606-8501
- Japan
| | - Kazuhiro Fukami
- Department of Materials Science and Engineering
- Kyoto University
- Kyoto 606-8501
- Japan
| | - Yujin Imaoka
- Department of Materials Science and Engineering
- Kyoto University
- Kyoto 606-8501
- Japan
| | - Atsushi Kitada
- Department of Materials Science and Engineering
- Kyoto University
- Kyoto 606-8501
- Japan
| | - Tetsuo Sakka
- Department of Energy and Hydrocarbon Chemistry
- Kyoto University
- Kyoto 615-8510
- Japan
| | - Takeshi Abe
- Department of Energy and Hydrocarbon Chemistry
- Kyoto University
- Kyoto 615-8510
- Japan
| | - Kuniaki Murase
- Department of Materials Science and Engineering
- Kyoto University
- Kyoto 606-8501
- Japan
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23
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van der Vegt NFA, Haldrup K, Roke S, Zheng J, Lund M, Bakker HJ. Water-Mediated Ion Pairing: Occurrence and Relevance. Chem Rev 2016; 116:7626-41. [DOI: 10.1021/acs.chemrev.5b00742] [Citation(s) in RCA: 155] [Impact Index Per Article: 19.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Nico F. A. van der Vegt
- Eduard-Zintl-Institut
für Anorganische und Physikalische Chemie and Center of Smart
Interfaces, Technische Universität Darmstadt, Alarich-Weiss-Strasse
10, 64287 Darmstadt, Germany
| | - Kristoffer Haldrup
- Physics
Department, NEXMAP Section, Technical University of Denmark, Fysikvej
307, 2800 Kongens
Lyngby, Denmark
| | - Sylvie Roke
- Laboratory
for Fundamental BioPhotonics, Institute of Bioengineering, and Institute
of Materials Science, School of Engineering, and Lausanne Centre for
Ultrafast Science, École Polytechnique Fédérale de Lausanne, CH-1015 Lausanne, Switzerland
| | - Junrong Zheng
- College
of Chemistry and Molecular Engineering, Beijing National Laboratory
for Molecular Sciences, Peking University, Beijing 100871, China
- Department
of Chemistry, Rice University, 6100 Main Street, Houston, Texas 77005-1892, United States
| | - Mikael Lund
- Division
of Theoretical Chemistry, Department of Chemistry, Lund University, SE-22100 Lund, Sweden
| | - Huib J. Bakker
- FOM Institute AMOLF, Science
Park 104, 1098 XG Amsterdam, The Netherlands
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Nilsson EJ, Alfredsson V, Bowron DT, Edler KJ. A neutron scattering and modelling study of aqueous solutions of tetramethylammonium and tetrapropylammonium bromide. Phys Chem Chem Phys 2016; 18:11193-201. [DOI: 10.1039/c6cp01389a] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Abstract
Tetrapropylammonium ions cluster and have less structured water arrangements whereas tetramethylammonium ions occur as single molecules with tetrahedral water arrangements.
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Affiliation(s)
| | | | - Daniel T. Bowron
- ISIS
- Science and Technology Facilities Council Rutherford Appleton Laboratory
- Didcot OX11 0QX
- UK
| | - Karen J. Edler
- Physical Chemistry
- KILU
- Lund University
- SE-22100 Lund
- Sweden
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25
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Kapitanov IV, Abakumov AA, Serdyuk AA. Identification of products in the reaction of 2-[(hydroxyimino)methyl]-1,3-dimethylimidazolium iodide with diethyl 4-nitrophenyl phosphate in alkaline medium. RUSSIAN JOURNAL OF ORGANIC CHEMISTRY 2015. [DOI: 10.1134/s1070428015100024] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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26
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Bhowmik D, Malikova N, Mériguet G, Bernard O, Teixeira J, Turq P. Aqueous solutions of tetraalkylammonium halides: ion hydration, dynamics and ion-ion interactions in light of steric effects. Phys Chem Chem Phys 2015; 16:13447-57. [PMID: 24887596 DOI: 10.1039/c4cp01164c] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Molecular simulations have allowed us to probe the atomic details of aqueous solutions of tetramethylammonium (TMA) and tetrabutylammonium (TBA) bromide, across a wide range of concentrations (0.5 to 3-4 molal). We highlight the space-filling (TMA(+)) versus penetrable (TBA(+)) nature of these polyatomic cations and its consequence for ion hydration, ion dynamics and ion-ion interactions. A well-established hydration is seen for both TMA(+) and TBA(+) throughout the concentration range studied. A clear penetration of water molecules, as well as counterions, between the hydrocarbon arms of TBA(+), which remain in an extended configuration, is seen. Global rotation of individual TBA(+) points towards isolated rather than aggregated ions (from dilute up to 1 m concentration). Only for highly concentrated solutions, in which inter-penetration of adjacent TBA(+)s cannot be avoided, does the rotational time increase dramatically. From both structural and dynamic data we conclude that there is absence of hydrophobicity-driven cation-cation aggregation in both TMABr and TBABr solutions studied. The link between these real systems and the theoretical predictions for spherical hydrophobic solutes of varying size does not seem straightforward.
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Affiliation(s)
- Debsindhu Bhowmik
- Laboratoire Léon Brillouin, UMR CEA-CNRS 12, CEA Saclay, 91191 Gif-sur-Yvette, France
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27
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Benjamin I. Correlating structure and thermodynamics of hydrophobic–hydrophilic ion pairs in water. Chem Phys Lett 2015. [DOI: 10.1016/j.cplett.2015.02.046] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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28
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Palombo F, Heisler IA, Hribar-Lee B, Meech SR. Tuning the Hydrophobic Interaction: Ultrafast Optical Kerr Effect Study of Aqueous Ionene Solutions. J Phys Chem B 2014; 119:8900-8. [DOI: 10.1021/jp506701a] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
- Francesca Palombo
- School
of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, U.K
- School
of Physics, University of Exeter, Stocker Road, Exeter EX4 4QL, U.K
| | - Ismael A. Heisler
- School
of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, U.K
| | - Barbara Hribar-Lee
- Faculty
of Chemistry and Chemical Technology, University of Ljubljana, Askerceva
5, 1000 Ljubljana, Slovenia
| | - Stephen R. Meech
- School
of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, U.K
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