1
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Nagasaka M, Kumaki F, Yao Y, Adachi JI, Mochizuki K. Mechanism of poly( N-isopropylacrylamide) cononsolvency in aqueous methanol solutions explored via oxygen K-edge X-ray absorption spectroscopy. Phys Chem Chem Phys 2024; 26:13634-13638. [PMID: 38685819 DOI: 10.1039/d4cp00676c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/02/2024]
Abstract
The cononsolvency mechanism of poly(N-isopropylacrylamide) (PNIPAM), dissolving in pure methanol (MeOH) and water (H2O) but being insoluble in MeOH-H2O mixtures, was investigated by O K-edge X-ray absorption spectroscopy (XAS). The cononsolvency emerges from the aggregation of PNIPAM with MeOH clusters, leading to the collapse of the hydrophobic hydration of PNIPAM.
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Affiliation(s)
- Masanari Nagasaka
- Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan.
- Molecular Science Program, Graduate Institute for Advanced Studies, SOKENDAI, Myodaiji, Okazaki 444-8585, Japan
| | - Fumitoshi Kumaki
- Photon Factory, Institute of Materials Structure Science, High Energy Accelerator Research Organization, 1-1 Oho, Tsukuba, Ibaraki 305-0801, Japan
| | - Yifeng Yao
- Department of Chemistry, Zhejiang University, Hangzhou, 310028, P. R. China
| | - Jun-Ichi Adachi
- Photon Factory, Institute of Materials Structure Science, High Energy Accelerator Research Organization, 1-1 Oho, Tsukuba, Ibaraki 305-0801, Japan
- Materials Structure Science Program, Graduate Institute for Advanced Studies, SOKENDAI, 1-1 Oho, Tsukuba, Ibaraki 305-0801, Japan
| | - Kenji Mochizuki
- Department of Chemistry, Zhejiang University, Hangzhou, 310028, P. R. China
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2
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Nagasaka M. Carbon K-edge x-ray absorption spectra of liquid alcohols from quantum chemical calculations of liquid structures obtained by molecular dynamics simulations. J Chem Phys 2023; 158:024501. [PMID: 36641387 DOI: 10.1063/5.0131017] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022] Open
Abstract
For reproducing the carbon K-edge x-ray absorption spectra of liquid alcohols, inner-shell quantum chemical calculations based on the Hartree-Fock method were performed with the snapshots of the liquid structures obtained by molecular dynamics simulations. The C K-edge inner-shell spectrum of liquid ethanol (EtOH) was obtained by the summation of one thousand calculated spectra of EtOH molecules including neighbor EtOH molecules within the CH2-CH2 distance of 6 Å. For the C K-edge inner-shell spectrum of liquid methanol (MeOH), we have calculated one thousand spectra of MeOH molecules including neighbor MeOH molecules within the CH3-CH3 distance of 6 Å. The calculated C K-edge inner-shell spectra of liquid alcohols well reproduced the spectral shapes of the experimentally obtained x-ray absorption spectra and the spectral changes from gas to liquid phases.
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Affiliation(s)
- Masanari Nagasaka
- Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan and SOKENDAI (The Graduate University for Advanced Studies), Myodaiji, Okazaki 444-8585, Japan
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3
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Pršlja P, Žibert T, Urbic T. Monte Carlo simulations of simple two dimensional water-alcohol mixtures. J Mol Liq 2022; 368:120692. [PMID: 37731590 PMCID: PMC10508878 DOI: 10.1016/j.molliq.2022.120692] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Simple alcohols such as methanol and ethanol, are organic chemicals that can be used to store energy, which can be used as an alternative to fossil fuels. Each alcohol has at least one hydroxyl group attached to a carbon atom of an alkyl group. They can be considered as organic derivatives of water in which one of the hydrogen atoms is replaced by an alkyl group. In this work, we determined the thermodynamic and structural properties of two dimensional water-alcohol mixtures using the Monte Carlo method. We used two-dimensional Mercedes-Benz (MB) model for water and MB based models for lower alcohols. The structural and thermodynamic properties of the mixtures were studied by Monte Carlo simulations in the isothermal-isobaric ensemble. We show that 2D models display similar trends in the density maxima as in real water-alcohol mixtures. With increasing content of alcohols, the temperature of maxima increases and upon further increase starts to decrease and at high concentrations, the density maxima disappears.
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Affiliation(s)
- Paulina Pršlja
- Department of Electrical Engineering and Automation, School of Electrical Engineering, Aalto University, 02150 Espoo, Finland
| | - Taja Žibert
- Department of Physical Chemistry, Faculty of Chemistry and Chemical Technology, University of Ljubljana, Vecna pot 113, SI-1000, Slovenia
| | - Tomaz Urbic
- Department of Physical Chemistry, Faculty of Chemistry and Chemical Technology, University of Ljubljana, Vecna pot 113, SI-1000, Slovenia
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4
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Tang H, Cai J, Zhu CY, Chen GJ, Wang XH, Sun CY. Review on the clustering behavior in aqueous solutions. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2022.120382] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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5
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Dueby S, Dubey V, Indra S, Daschakraborty S. Non-monotonic composition dependence of the breakdown of Stokes-Einstein relation for water in aqueous solutions of ethanol and 1-propanol: explanation using translational jump-diffusion approach. Phys Chem Chem Phys 2022; 24:18738-18750. [PMID: 35900000 DOI: 10.1039/d2cp02664c] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A series of experimental and simulation studies examined the validity of the Stokes-Einstein relationship (SER) of water in binary water/alcohol mixtures of different mixture compositions. These studies revealed a strong non-monotonic composition dependence of the SER with maxima at the specific alcohol mole fraction where the non-idealities of the thermodynamic and transport properties are observed. The translational jump-diffusion (TJD) approach elucidated the breakdown of the SER in pure supercooled water as caused by the jump translation of molecules. The breakdown of SER in the supercooled water/methanol binary mixture was successfully explained using the same TJD approach. To further generalize the picture, here we focus on the non-monotonic composition dependence of SER breakdown of water in two water/alcohol mixtures (water/ethanol and water/propanol) for a broad temperature range. In agreement with previous studies, maximum breakdown of SER is observed for the mixture with alcohol mole fraction x = 0.2. Diffusion of the water molecules at the maximum SER breakdown point is largely contributed by jump-diffusion. The residual-diffusion, obtained by subtracting the jump-diffusion from the total diffusion, approximately follows the SER for different compositions and temperatures. We also performed hydrogen (H-)bond dynamics and observed that the contribution of jump-diffusion is proportional to the total free energy of activation of breaking all H-bonds that exist around a molecule. This study, therefore, suggests that the more a molecule is trapped by H-bonding, the more likely it is to diffuse through the jump-diffusion mechanism, eventually leading to an increasing degree of SER breakdown.
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Affiliation(s)
- Shivam Dueby
- Department of Chemistry, Indian Institute of Technology Patna, Bihar 801106, India.
| | - Vikas Dubey
- Department of Chemistry, Indian Institute of Technology Patna, Bihar 801106, India.
| | - Sandipa Indra
- Department of Chemistry, Indian Institute of Technology Patna, Bihar 801106, India.
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6
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Nagasaka M, Bouvier M, Yuzawa H, Kosugi N. Hydrophobic Cluster Formation in Aqueous Ethanol Solutions Probed by Soft X-ray Absorption Spectroscopy. J Phys Chem B 2022; 126:4948-4955. [PMID: 35748647 DOI: 10.1021/acs.jpcb.2c02990] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Hydrophobic cluster structures in aqueous ethanol solutions at different concentrations have been investigated by soft X-ray absorption spectroscopy (XAS). In the O K-edge XAS, we have found that hydrogen bond structures among water molecules are enhanced in the middle-concentration region by the hydrophobic interaction of the ethyl groups in ethanol. In the C K-edge XAS, the lower energy features arise from a transition from the terminal methyl C 1s electron to an unoccupied orbital of 3s Rydberg character, which is sensitive to the nearest-neighbor intermolecular interactions. From the comparison of C K-edge XAS with the inner-shell calculations, we have found that ethanol clusters are easily formed in the middle-concentration region due to the hydrophobic interaction of the ethyl group in ethanol, resulting in the enhancement of the hydrogen bond structures among water molecules. This behavior is different from aqueous methanol solutions, where the methanol-water mixed clusters are more predominant in the middle-concentration region due to the relatively weak hydrophobic interactions of the methyl group in methanol.
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Affiliation(s)
- Masanari Nagasaka
- Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan.,SOKENDAI (The Graduate University for Advanced Studies), Myodaiji, Okazaki 444-8585, Japan
| | - Mathilde Bouvier
- Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan
| | - Hayato Yuzawa
- Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan
| | - Nobuhiro Kosugi
- Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan.,SOKENDAI (The Graduate University for Advanced Studies), Myodaiji, Okazaki 444-8585, Japan
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7
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Papez P, Urbic T. Simple two-dimensional models of alcohols. Phys Rev E 2022; 105:054608. [PMID: 35706252 PMCID: PMC10040488 DOI: 10.1103/physreve.105.054608] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2022] [Accepted: 05/11/2022] [Indexed: 05/03/2023]
Abstract
Alcohols are organic compounds characterized by one or more hydroxyl groups attached to a carbon atom of an alkyl group. They can be considered as organic derivatives of water in which one of the hydrogen atoms is replaced by an alkyl group. In this work, the Mercedes-Benz model of water is used to design simple two-dimensional (2D) models of lower alcohols. The structural and thermodynamic properties of the constructed simple models are studied by conducting Monte Carlo simulations in the isothermal-isobaric ensemble. We show that 2D models display similar trends in structuring and thermodynamics as in experiments. The present work on the smallest amphiphilc organic solutes provides a simple testing ground to study the competition between polar and non-polar effects within the molecule and physical properties.
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Affiliation(s)
- Petra Papez
- Laboratory for Molecular Modeling, National Institute of Chemistry, Hajdrihova 19, SI-1001, Slovenia and Department of Physics, Faculty of Mathematics and Physics, University of Ljubljana, Jadranska 19, SI-1000, Slovenia
| | - Tomaz Urbic
- Faculty of Chemistry and Chemical Technology, University of Ljubljana, Vecna Pot 113, SI-1000 Ljubljana, Slovenia
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8
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Trabelsi S, Tlili M, Abdelmoulahi H, Bouazizi S, Nasr S, González MA, Bellissent-Funel MC, Darpentigny J. Intermolecular interactions in an equimolar methanol-water mixture: Neutron scattering, DFT, NBO, AIM, and MD investigations. J Mol Liq 2022. [DOI: 10.1016/j.molliq.2021.118131] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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9
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Zhang X, Wang Y, Yao J, Li H, Mochizuki K. A tiny charge-scaling in the OPLS-AA + L-OPLS force field delivers the realistic dynamics and structure of liquid primary alcohols. J Comput Chem 2021; 43:421-430. [PMID: 34962297 DOI: 10.1002/jcc.26802] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2021] [Revised: 12/07/2021] [Accepted: 12/10/2021] [Indexed: 11/06/2022]
Abstract
We carry out molecular dynamics simulations for pure liquid primary alcohols ranging from methanol to 1-decanol under ambient conditions. Based on the OPLS-AA force field with the L-OPLS correction, we demonstrate that a few % increases in the partial charges deliver the realistic dynamics (self-diffusion coefficient and shear viscosity) and structure (density and X-ray scattering intensity) as well as enthalpy of vaporization and isothermal compressibility. The validity against thermal expansion coefficient, isobaric heat capacity, and static dielectric constant are also discussed.
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Affiliation(s)
- Xuan Zhang
- Department of Chemistry, Zhejiang University, Hangzhou, People's Republic of China
| | - Yongtao Wang
- Department of Chemistry, Zhejiang University, Hangzhou, People's Republic of China
| | - Jia Yao
- Department of Chemistry, Zhejiang University, Hangzhou, People's Republic of China
| | - Haoran Li
- Department of Chemistry, Zhejiang University, Hangzhou, People's Republic of China
| | - Kenji Mochizuki
- Department of Chemistry, Zhejiang University, Hangzhou, People's Republic of China
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10
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Comtet J, Rayabharam A, Glushkov E, Zhang M, Avsar A, Watanabe K, Taniguchi T, Aluru NR, Radenovic A. Anomalous interfacial dynamics of single proton charges in binary aqueous solutions. SCIENCE ADVANCES 2021; 7:eabg8568. [PMID: 34586851 PMCID: PMC8480921 DOI: 10.1126/sciadv.abg8568] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2021] [Accepted: 08/06/2021] [Indexed: 05/25/2023]
Abstract
Our understanding of the dynamics of charge transfer between solid surfaces and liquid electrolytes has been hampered by the difficulties in obtaining interface, charge, and solvent-specific information at both high spatial and temporal resolution. Here, we measure at the single charge scale the dynamics of protons at the interface between an hBN crystal and binary mixtures of water and organic amphiphilic solvents (alcohols and acetone), evidencing a marked influence of solvation on interfacial dynamics. Applying single-molecule localization microscopy to emissive crystal defects, we observe correlated activation between adjacent ionizable surface defects, mediated by the transport of single excess protons along the solid/liquid interface. Solvent content has a nontrivial effect on interfacial dynamics, leading at intermediate water fraction to an increased surface diffusivity, as well as an increased affinity of the proton charges to the solid surface. Our measurements evidence the notable role of solvation on interfacial proton charge transport.
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Affiliation(s)
- Jean Comtet
- Laboratory of Nanoscale Biology, Institute of Bioengineering, School of Engineering, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
- Laboratory of Soft Matter Science and Engineering, ESPCI Paris, PSL University, Sorbonne Université, CNRS, F-75005 Paris, France
| | - Archith Rayabharam
- Department of Mechanical Science and Engineering, University of Illinois at Urbana-Champaign, Champaign, IL, USA
| | - Evgenii Glushkov
- Laboratory of Nanoscale Biology, Institute of Bioengineering, School of Engineering, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Miao Zhang
- Laboratory of Nanoscale Biology, Institute of Bioengineering, School of Engineering, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Ahmet Avsar
- School of Mathematics, Statistics and Physics, Newcastle University, Newcastle upon Tyne, NE1 7RU, UK
| | - Kenji Watanabe
- National Institute for Materials Science, Tsukuba, Japan
| | | | - Narayana R. Aluru
- Department of Mechanical Science and Engineering, University of Illinois at Urbana-Champaign, Champaign, IL, USA
| | - Aleksandra Radenovic
- Laboratory of Nanoscale Biology, Institute of Bioengineering, School of Engineering, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
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11
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Reese T, Suarez C, Premasiri WR, Shaine ML, Ingraham H, Brodeur AN, Ziegler LD. Surface enhanced Raman scattering specificity for detection and identification of dried bloodstains. Forensic Sci Int 2021; 328:111000. [PMID: 34564021 DOI: 10.1016/j.forsciint.2021.111000] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2021] [Revised: 08/16/2021] [Accepted: 09/10/2021] [Indexed: 01/20/2023]
Abstract
Surface enhanced Raman spectroscopy (SERS) provides highly specific vibrational signatures identifying dried blood for a variety of forensic applications. SERS spectra on Au nanoparticle substrates excited at 785 nm are found to identify dried stains of human and nonhuman blood from seven animals, and distinguish stains due to menstrual and peripheral blood. In addition, the unique SERS bloodstain spectrum is distinct from the SERS spectra of thirty red-brown stains of potential household substances that could be visually mistaken for bloodstains and from food stains that have been shown to give positive results with presumptive colorimetric blood tests. Finally, a SERS swab procedure has been developed and demonstrates that the substrates that a blood sample dried on does not offer any Raman or fluorescence interference for the SERS identification of dried blood. Such bloodstains on porous and nonporous materials are all identical and exclusively due to the heme moiety of hemoglobin. Optimized selection of the extraction solvent is found to control the chemical composition of molecular components appearing in the SERS spectrum of complex, multicomponent biological mixtures, such as body fluids.
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Affiliation(s)
- T Reese
- Program in Biomedical Forensic Sciences, Boston University School of Medicine, Boston, MA 02118, USA
| | - C Suarez
- Department of Chemistry, Boston University, 590 Commonwealth Ave., Boston, MA 02215, USA
| | - W R Premasiri
- Department of Chemistry, Boston University, 590 Commonwealth Ave., Boston, MA 02215, USA; Photonics Center, Boston University, 15 Saint Mary's St., Boston, MA 02215, USA
| | - M L Shaine
- Program in Biomedical Forensic Sciences, Boston University School of Medicine, Boston, MA 02118, USA
| | - H Ingraham
- Department of Chemistry, Boston University, 590 Commonwealth Ave., Boston, MA 02215, USA; Photonics Center, Boston University, 15 Saint Mary's St., Boston, MA 02215, USA
| | - A N Brodeur
- Program in Biomedical Forensic Sciences, Boston University School of Medicine, Boston, MA 02118, USA
| | - L D Ziegler
- Department of Chemistry, Boston University, 590 Commonwealth Ave., Boston, MA 02215, USA; Photonics Center, Boston University, 15 Saint Mary's St., Boston, MA 02215, USA.
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12
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Singh AK, Schade B, Wycisk V, Böttcher C, Haag R, von Berlepsch H. Aggregation of Amphiphilic Carbocyanines: Fluorination Favors Cylindrical Micelles over Bilayered Tubes. J Phys Chem B 2021; 125:10538-10550. [PMID: 34505509 DOI: 10.1021/acs.jpcb.1c05128] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
The synthesis of a new amphiphilic 5,5',6,6'-tetrachlorobenzimidacarbocyanine dye derivative with -(CH2)2-(CF2)5-CF3 chains attached to the nitrogen atoms in the 1,1'-position, CF8O3, is reported. Depending on the dye concentration and the addition of MeOH, CF8O3 forms J- and H-aggregates in aqueous solutions. The aggregation behavior was investigated using steady-state absorption, linear dichroism, and fluorescence spectroscopy, as well as by cryogenic transmission electron microscopy (cryo-TEM). The J-band of the MeOH-free solution is monomer-like, rather broad, and less red-shifted with respect to the monomer absorption, indicating weak excitonic coupling and disorder effects. Cryo-TEM reveals a diversity of supramolecular structures, wherein linear and branched cylindrical micelles dominate. It is concluded that the high stiffness of fluoroalkyl chains does not allow the chains to splay and completely fill up the hydrophobic gap between opposing chromophores. This destabilizes the bilayers and favors the micellar structure motifs instead. The aggregates appearing at 30% MeOH show a split absorption spectrum consisting of a broad blue-shifted H-band and an accompanying sharp red-shifted J-band with perpendicular polarizations. These HJ-type aggregates are also composed of micellar fibers, but these bundle into rope-like strands. For 10% MeOH, a narrow bilayered tube is the dominating morphology. The observed MeOH dependence of aggregation reveals a clear cosolvent effect.
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Affiliation(s)
- Abhishek Kumar Singh
- Institut für Chemie und Biochemie, Organische Chemie, Freie Universität Berlin, Takustraße 3, 14195 Berlin, Germany
| | - Boris Schade
- Forschungszentrum für Elektronenmikroskopie, Institut für Chemie und Biochemie, Freie Universität Berlin, Fabeckstraße 36a, 14195 Berlin, Germany.,Core Facility BioSupraMol, Institut für Chemie und Biochemie, Freie Universität Berlin, Fabeckstraße 36a, 14195 Berlin, Germany
| | - Virginia Wycisk
- Institut für Chemie und Biochemie, Organische Chemie, Freie Universität Berlin, Takustraße 3, 14195 Berlin, Germany
| | - Christoph Böttcher
- Forschungszentrum für Elektronenmikroskopie, Institut für Chemie und Biochemie, Freie Universität Berlin, Fabeckstraße 36a, 14195 Berlin, Germany
| | - Rainer Haag
- Institut für Chemie und Biochemie, Organische Chemie, Freie Universität Berlin, Takustraße 3, 14195 Berlin, Germany
| | - Hans von Berlepsch
- Core Facility BioSupraMol, Institut für Chemie und Biochemie, Freie Universität Berlin, Fabeckstraße 36a, 14195 Berlin, Germany
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13
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Weeraratna C, Amarasinghe C, Lu W, Ahmed M. A Direct Probe of the Hydrogen Bond Network in Aqueous Glycerol Aerosols. J Phys Chem Lett 2021; 12:5503-5511. [PMID: 34087076 DOI: 10.1021/acs.jpclett.1c01383] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
The properties of aerosols are of paramount importance in atmospheric chemistry and human health. The hydrogen bond network of glycerol-water aerosols generated from an aqueous solution with different mixing ratios is probed directly with X-ray photoelectron spectroscopy. The carbon and oxygen X-ray spectra reveal contributions from gas and condensed phase components of the aerosol. It is shown that water suppresses glycerol evaporation up to a critical mixing ratio. A dielectric analysis using terahertz spectroscopy coupled with infrared spectroscopy of the bulk solutions provides a picture of the microscopic heterogeneity prevalent in the hydrogen bond network when combined with the photoelectron spectroscopy analysis. The hydrogen bond network is composed of three intertwined regions. At low concentrations, glycerol molecules are surrounded by water forming a solvated water network. Adding more glycerol leads to a confined water network, maximizing at 22 mol %, beyond which the aerosol resembles bulk glycerol. This microscopic view of hydrogen bonding networks holds promise in probing evaporation, diffusion dynamics, and reactivity in aqueous aerosols.
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Affiliation(s)
- Chaya Weeraratna
- Chemical Science Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Chandika Amarasinghe
- Chemical Science Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Wenchao Lu
- Chemical Science Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Musahid Ahmed
- Chemical Science Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
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14
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Nagasaka M, Kosugi N. Soft X-ray Absorption Spectroscopy for Observing Element-specific Intermolecular Interaction in Solution Chemistry. CHEM LETT 2021. [DOI: 10.1246/cl.200938] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
- Masanari Nagasaka
- Institute for Molecular Science, Myodaiji, Okazaki, Aichi 444-8585, Japan
- SOKENDAI (The Graduate University for Advanced Studies), Myodaiji, Okazaki, Aichi 444-8585, Japan
| | - Nobuhiro Kosugi
- Institute for Molecular Science, Myodaiji, Okazaki, Aichi 444-8585, Japan
- SOKENDAI (The Graduate University for Advanced Studies), Myodaiji, Okazaki, Aichi 444-8585, Japan
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15
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Abstract
Aqueous cosolvent systems (ACoSs) are mixtures of small polar molecules such as amides, alcohols, dimethyl sulfoxide, or ions in water. These liquids have been the focus of fundamental studies due to their complex intermolecular interactions as well as their broad applications in chemistry, medicine, and materials science. ACoSs are fully miscible at the macroscopic level but exhibit nanometer-scale spatial heterogeneity. ACoSs have recently received renewed attention within the chemical physics community as model systems to explore the relationship between intermolecular interactions and microscopic liquid-liquid phase separation. In this perspective, we provide an overview of ACoS spatial segregation, dynamic heterogeneity, and multiscale relaxation dynamics. We describe emerging approaches to characterize liquid microstructure, H-bond networks, and dynamics using modern experimental tools combined with molecular dynamics simulations and network-based analysis techniques.
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Affiliation(s)
- Kwang-Im Oh
- Department of Chemistry, University of Texas at Austin, Austin, Texas 19104, USA
| | - Carlos R Baiz
- Department of Chemistry, University of Texas at Austin, Austin, Texas 19104, USA
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16
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Dwivedi S, Mata J, Mushrif SH, Chaffee AL, Tanksale A. Molecular Clustering in Formaldehyde-Methanol-Water Mixtures Revealed by High-Intensity, High-q Small-Angle Neutron Scattering. J Phys Chem Lett 2021; 12:480-486. [PMID: 33373259 DOI: 10.1021/acs.jpclett.0c03515] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Methanol-Water (mw) mixtures, with or without a solute, display a nonideal thermodynamic behavior, typically attributed to the structure of the microphase. However, experimental observation of the microphase structures at the molecular length scale has been a challenge. We report the presence of molecular clusters in mw and formaldehyde-methanol-water (fmw) mixtures using small-angle neutron scattering (SANS) experiments and molecular dynamics (MD) simulations. Hydrophobic clusters of methanol in mw and formaldehyde-methanol in fmw mixtures were observed at low methanol compositions (xm ≤ 0.3). A three-dimensional hydrogen-bonded network of water with the solute is observed at xm = 0.5. Linear chains of methanol surrounding the formaldehyde and water molecules were observed at high methanol compositions (xm ≥ 0.7). The calculated size of the molecular clusters (r ≈ 0.5 nm, spherical) from the SANS data and their volume fraction closely matched the MD simulation results.
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Affiliation(s)
- Swarit Dwivedi
- Department of Chemical Engineering, Monash University, Clayton, Victoria 3800, Australia
| | - Jitendra Mata
- Australian Centre for Neutron Scattering, Australian Nuclear Science and Technology Organisation, Lucas Heights, NSW 2234, Australia
| | - Samir H Mushrif
- Department of Chemical and Materials Engineering, University of Alberta, 9211-116 Street, Edmonton, Alberta T6G 1H9, Canada
| | - Alan L Chaffee
- School of Chemistry, Monash University, Clayton, Victoria 3800, Australia
| | - Akshat Tanksale
- Department of Chemical Engineering, Monash University, Clayton, Victoria 3800, Australia
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17
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Viscosity study of tert-butyl alcohol aqueous solution by Brownian motion and gravimetric capillaries. J Mol Liq 2020. [DOI: 10.1016/j.molliq.2020.114170] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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18
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Dubey V, Daschakraborty S. Breakdown of the Stokes-Einstein Relation in Supercooled Water/Methanol Binary Mixtures: Explanation Using the Translational Jump-Diffusion Approach. J Phys Chem B 2020; 124:10398-10408. [PMID: 33153260 DOI: 10.1021/acs.jpcb.0c07318] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A recent experiment has directly checked the validity of the Stokes-Einstein (SE) relation for pure water, pure methanol, and their binary mixtures of three different compositions at different temperatures. The effect of composition on the nature of breakdown of the SE relation is interesting. While in the majority of the systems, an increasing SE breakdown is observed with decreasing temperature, the breakdown is already significant at higher temperatures for the equimolar mixture. Violations of the SE relation in pure supercooled water at different temperatures and pressures have been previously explained using the translational jump-diffusion (TJD) approach, which provides a fundamental molecular basis, by directly connecting the SE breakdown with jump-diffusion of the molecules. We have used the same TJD approach for explaining the SE breakdown for the methanol/water binary mixtures of compositions studied in the experiment over a wide range of temperatures between 220 K and 300 K. We have understood that the jump-diffusion is the key responsible factor for the SE breakdown. The maximum jump-diffusion contribution gives rise to the early SE breakdown observed for the equimolar mixture observed in the experiment. This study, therefore, provides molecular insight into the SE breakdown for the supercooled water/methanol binary mixture, as found in the experiment.
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Affiliation(s)
- Vikas Dubey
- Department of Chemistry, Indian Institute of Technology Patna, Patna, Bihar 801106, India
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19
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Pethes I, Pusztai L, Ohara K, Kohara S, Darpentigny J, Temleitner L. Temperature-dependent structure of methanol-water mixtures on cooling: X-ray and neutron diffraction and molecular dynamics simulations. J Mol Liq 2020. [DOI: 10.1016/j.molliq.2020.113664] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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20
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Sinha S, Gharat PM, Pal H, Dutta Choudhury S. Lumichrome tautomerism in alcohol-water mixtures: Effect of carbon chain length and mole fraction of alcohols. J Mol Liq 2020. [DOI: 10.1016/j.molliq.2020.113621] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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21
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Ab Initio Molecular Dynamics Study of Methanol-Water Mixtures under External Electric Fields. Molecules 2020; 25:molecules25153371. [PMID: 32722281 PMCID: PMC7435743 DOI: 10.3390/molecules25153371] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2020] [Revised: 07/17/2020] [Accepted: 07/20/2020] [Indexed: 11/25/2022] Open
Abstract
Intense electric fields applied on H-bonded systems are able to induce molecular dissociations, proton transfers, and complex chemical reactions. Nevertheless, the effects induced in heterogeneous molecular systems such as methanol-water mixtures are still elusive. Here we report on a series of state-of-the-art ab initio molecular dynamics simulations of liquid methanol-water mixtures at different molar ratios exposed to static electric fields. If, on the one hand, the presence of water increases the proton conductivity of methanol-water mixtures, on the other, it hinders the typical enhancement of the chemical reactivity induced by electric fields. In particular, a sudden increase of the protonic conductivity is recorded when the amount of water exceeds that of methanol in the mixtures, suggesting that important structural changes of the H-bond network occur. By contrast, the field-induced multifaceted chemistry leading to the synthesis of e.g., hydrogen, dimethyl ether, formaldehyde, and methane observed in neat methanol, in 75:25, and equimolar methanol-water mixtures, completely disappears in samples containing an excess of water and in pure water. The presence of water strongly inhibits the chemical reactivity of methanol.
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22
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Smith AD, Balčiu̅nas T, Chang YP, Schmidt C, Zinchenko K, Nunes FB, Rossi E, Svoboda V, Yin Z, Wolf JP, Wörner HJ. Femtosecond Soft-X-ray Absorption Spectroscopy of Liquids with a Water-Window High-Harmonic Source. J Phys Chem Lett 2020; 11:1981-1988. [PMID: 32073862 PMCID: PMC7086398 DOI: 10.1021/acs.jpclett.9b03559] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/06/2023]
Abstract
Femtosecond X-ray absorption spectroscopy (XAS) is a powerful method to investigate the dynamical behavior of a system after photoabsorption in real time. So far, the application of this technique has remained limited to large-scale facilities, such as femtosliced synchrotrons and free-electron lasers (FEL). In this work, we demonstrate femtosecond time-resolved soft-X-ray absorption spectroscopy of liquid samples by combining a sub-micrometer-thin flat liquid jet with a high-harmonic tabletop source covering the entire water-window range (284-538 eV). Our work represents the first extension of tabletop XAS to the oxygen edge of a chemical sample in the liquid phase. In the time domain, our measurements resolve the gradual appearance of absorption features below the carbon K-edge of ethanol and methanol during strong-field ionization and trace the valence-shell ionization dynamics of the liquid alcohols with a temporal resolution of ∼30 fs. This technique opens unique opportunities to study molecular dynamics of chemical systems in the liquid phase with elemental, orbital, and site sensitivity.
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Affiliation(s)
- Adam D. Smith
- Laboratory
of Physical Chemistry, ETH Zürich, 8093 Zürich, Switzerland
| | - Tadas Balčiu̅nas
- GAP-Biophotonics, Université de Genéve, 1205 Geneva, Switzerland
| | - Yi-Ping Chang
- GAP-Biophotonics, Université de Genéve, 1205 Geneva, Switzerland
| | - Cédric Schmidt
- GAP-Biophotonics, Université de Genéve, 1205 Geneva, Switzerland
| | | | - Fernanda B. Nunes
- Laboratory
of Physical Chemistry, ETH Zürich, 8093 Zürich, Switzerland
| | - Emanuele Rossi
- Laboratory
of Physical Chemistry, ETH Zürich, 8093 Zürich, Switzerland
| | - Vít Svoboda
- Laboratory
of Physical Chemistry, ETH Zürich, 8093 Zürich, Switzerland
| | - Zhong Yin
- Laboratory
of Physical Chemistry, ETH Zürich, 8093 Zürich, Switzerland
- E-mail:
| | - Jean-Pierre Wolf
- GAP-Biophotonics, Université de Genéve, 1205 Geneva, Switzerland
| | - Hans Jakob Wörner
- Laboratory
of Physical Chemistry, ETH Zürich, 8093 Zürich, Switzerland
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23
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Foster W, Miyazawa K, Fukuma T, Kusumaatmaja H, Voϊtchovsky K. Self-assembly of small molecules at hydrophobic interfaces using group effect. NANOSCALE 2020; 12:5452-5463. [PMID: 32080696 DOI: 10.1039/c9nr09505e] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Although common in nature, the self-assembly of small molecules at sold-liquid interfaces is difficult to control in artificial systems. The high mobility of dissolved small molecules limits their residence at the interface, typically restricting the self-assembly to systems under confinement or with mobile tethers between the molecules and the surface. Small hydrogen-bonding molecules can overcome these issues by exploiting group-effect stabilization to achieve non-tethered self-assembly at hydrophobic interfaces. Significantly, the weak molecular interactions with the solid makes it possible to influence the interfacial hydrogen bond network, potentially creating a wide variety of supramolecular structures. Here we investigate the nanoscale details of water and alcohols mixtures self-assembling at the interface with graphite through group-effect. We explore the interplay between inter-molecular and surface interactions by adding small amounts of foreign molecules able to interfere with the hydrogen bond network and systematically varying the length of the alcohol hydrocarbon chain. The resulting supramolecular structures forming at room temperature are then examined using atomic force microscopy with insights from computer simulations. We show that the group-based self-assembly approach investigated here is general and can be reproduced on other substrates such as molybdenum disulphide and graphene oxide, potentially making it relevant for a wide variety of systems.
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Affiliation(s)
- William Foster
- Durham University, Physics Department, Durham DH1 3LE, UK.
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24
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Dwivedi S, Mushrif SH, Chaffee AL, Tanksale A. Solvation behaviour and micro-phase structure of formaldehyde-methanol-water mixtures. J Mol Liq 2020. [DOI: 10.1016/j.molliq.2020.112444] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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25
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Nagasaka M, Yuzawa H, Kosugi N. Soft X-ray Absorption Spectroscopy of Liquids for Understanding Chemical Processes in Solution. ANAL SCI 2020; 36:95-105. [PMID: 31708561 DOI: 10.2116/analsci.19r005] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Soft X-ray absorption spectroscopy (XAS) involving excitation processes of a core electron to unoccupied states is an effective method to study local structures around excited C, N, and O atoms in liquid samples. Since soft X-rays are strongly absorbed by air and liquid itself, we have developed transmission-type liquid flow cells, where the absorbance of liquid samples can be easily reduced and optimized by controlling the liquid thickness. By using the transmission-mode XAS techniques, we have investigated local structures of several liquid samples such as concentration dependence of aqueous pyridine solutions and unexpected temperature-dependent structural changes in liquid benzene from the precise energy shift measurements in XAS spectra with the help of molecular dynamics simulation and inner-shell calculations. These XAS techniques are also applied to in situ/operando observation of chemical processes in solutions such as catalytic and electrochemical reactions.
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Affiliation(s)
- Masanari Nagasaka
- Institute for Molecular Science.,SOKENDAI (The Graduate University for Advanced Studies)
| | | | - Nobuhiro Kosugi
- Institute for Molecular Science.,SOKENDAI (The Graduate University for Advanced Studies)
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26
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Nagasaka M, Yuzawa H, Takada N, Aoyama M, Rühl E, Kosugi N. Laminar flow in microfluidics investigated by spatially-resolved soft X-ray absorption and infrared spectroscopy. J Chem Phys 2019; 151:114201. [PMID: 31542036 DOI: 10.1063/1.5115191] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The application of soft X-ray absorption spectroscopy (XAS) to liquid cells based on microfluidics for chemical state analysis of light elements is much more difficult than hard X-ray absorption since soft X-rays cannot deeply penetrate a microfluidic cell. In this study, we have newly developed a microfluidic cell for spatially resolved XAS, where a 100 nm thick Si3N4 membrane is used for the measurement window to transmit soft X-rays for keeping the microfluidic flow at a width and depth of 50 µm. The π* peak of pyridine near the N K-edge XAS shows characteristic energy shifts near the liquid-liquid interface in a laminar flow of pyridine and water. The distributions of the molar fractions of pyridine and water near the liquid-liquid interface have been determined from the energy shifts of the π* peak probed at different geometric positions, where pyridine is mixed in the water part of the laminar flow and vice versa. The spatial distribution of both species has also been studied by infrared microscopy, using the same microfluidic setup. The present work clearly shows that these spectroscopic techniques are easily applicable to chemical and biological reactions prepared by microfluidics.
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Affiliation(s)
| | - Hayato Yuzawa
- Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan
| | - Noriko Takada
- Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan
| | - Masaki Aoyama
- Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan
| | - Eckart Rühl
- Physikalische Chemie, Freie Universität Berlin, Arnimallee 22, D-14195 Berlin, Germany
| | - Nobuhiro Kosugi
- Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan
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27
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Ren J, Achilleos DS, Golnak R, Yuzawa H, Xiao J, Nagasaka M, Reisner E, Petit T. Uncovering the Charge Transfer between Carbon Dots and Water by In Situ Soft X-ray Absorption Spectroscopy. J Phys Chem Lett 2019; 10:3843-3848. [PMID: 31246468 DOI: 10.1021/acs.jpclett.9b01800] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Carbon dots (CDs) exhibit outstanding physicochemical properties that render them excellent materials for various applications, often occurring in an aqueous environment, such as light harvesting and fluorescence bioimaging. Here we characterize the electronic structures of CDs and water molecules in aqueous dispersions using in situ X-ray absorption spectroscopy. Three types of CDs with different core structures (amorphous vs graphitic) and compositions (undoped vs nitrogen-doped) were investigated. Depending on the CD core structure, different ionic currents generated upon X-ray irradiation of the CD dispersions at the carbon K-edge were detected, which are interpreted in terms of different charge transfer to the surrounding solvent molecules. The hydrogen bonding networks of water molecules upon interaction with the different CDs were also probed at the oxygen K-edge. Both core graphitization and nitrogen doping were found to endow the CDs with enhanced electron transfer and hydrogen bonding capabilities with the surrounding water molecules.
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Affiliation(s)
- Jian Ren
- Institute for Nanospectroscopy , Helmholtz-Zentrum Berlin für Materialien und Energie GmbH (HZB) , Albert-Einstein-Straße 15 , 12489 Berlin , Germany
- Department of Physics , Freie Universität Berlin , Arnimallee 14 , 14195 Berlin , Germany
| | - Demetra S Achilleos
- Christian Doppler Laboratory for Sustainable SynGas Chemistry, Department of Chemistry , University of Cambridge , Lensfield Road , Cambridge CB2 1EW , United Kingdom
| | - Ronny Golnak
- Department of Highly Sensitive X-ray Spectroscopy , Helmholtz-Zentrum Berlin für Materialien und Energie GmbH (HZB) , Albert-Einstein-Straße 15 , 12489 Berlin , Germany
| | - Hayato Yuzawa
- Institute for Molecular Science, Myodaiji , Okazaki 444-8585 , Japan
| | - Jie Xiao
- Department of Highly Sensitive X-ray Spectroscopy , Helmholtz-Zentrum Berlin für Materialien und Energie GmbH (HZB) , Albert-Einstein-Straße 15 , 12489 Berlin , Germany
| | - Masanari Nagasaka
- Institute for Molecular Science, Myodaiji , Okazaki 444-8585 , Japan
| | - Erwin Reisner
- Christian Doppler Laboratory for Sustainable SynGas Chemistry, Department of Chemistry , University of Cambridge , Lensfield Road , Cambridge CB2 1EW , United Kingdom
| | - Tristan Petit
- Institute for Nanospectroscopy , Helmholtz-Zentrum Berlin für Materialien und Energie GmbH (HZB) , Albert-Einstein-Straße 15 , 12489 Berlin , Germany
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28
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Corsaro C, Fazio E, Mallamace D. The Stokes-Einstein relation in water/methanol solutions. J Chem Phys 2019; 150:234506. [DOI: 10.1063/1.5096760] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022] Open
Affiliation(s)
- C. Corsaro
- Dipartimento di Scienze Matematiche e Informatiche, Scienze Fisiche e Scienze della Terra, Università di Messina, Viale F. Stagno d’ Alcontres, 31, 98166 Messina, Italy
| | - E. Fazio
- Dipartimento di Scienze Matematiche e Informatiche, Scienze Fisiche e Scienze della Terra, Università di Messina, Viale F. Stagno d’ Alcontres, 31, 98166 Messina, Italy
| | - D. Mallamace
- Dipartimento di Scienze Matematiche e Informatiche, Scienze Fisiche e Scienze della Terra, Università di Messina, Viale F. Stagno d’ Alcontres, 31, 98166 Messina, Italy
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29
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Furukawa K, Kuronuma S, Judai K. Water fluctuation in methanol, ethanol, and 1-propanol aqueous-mixture probed by Brownian motion. J Chem Phys 2018; 149:244505. [PMID: 30599750 DOI: 10.1063/1.5064750] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023] Open
Abstract
The origin of the driving force in Brownian motion is the collision between the colloidal particle and the molecules of the surrounding fluid. Therefore, Brownian motion contains information on the local solvent structures of the surrounding colloid. The mean square displacement in a water-ethanol mixture is greater than that anticipated from the macroscopic shear viscosity, indicating that the microscopic movement of Brownian motion involves the local information on the water-ethanol mixture on a molecular level, i.e., an inhomogeneity in the Brownian particle size (∼1 μm). Here, the Brownian motion of mixtures of water and methanol, ethanol, and 1-propanol are systematically investigated. Similar discrepancies between the microscopic and macroscopic viscosities are observed at low alcohol molar concentrations, for all the alcohol mixtures. This means that inhomogeneity with water fluctuation is important in explanation of the unusual Brownian diffusions of alcohol aqueous solutions. The Brownian motion also reveals a thermal energy conversion mechanism between translation and rotation.
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Affiliation(s)
- Kazuki Furukawa
- Department of Physics, College of Humanities and Sciences, Nihon University, Sakurajosui 3-25-40, Setagaya-ku, Tokyo 156-8550, Japan
| | - Sumito Kuronuma
- Department of Physics, College of Humanities and Sciences, Nihon University, Sakurajosui 3-25-40, Setagaya-ku, Tokyo 156-8550, Japan
| | - Ken Judai
- Department of Physics, College of Humanities and Sciences, Nihon University, Sakurajosui 3-25-40, Setagaya-ku, Tokyo 156-8550, Japan
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30
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Furlan AP, Lomba E, Barbosa MC. Temperature of maximum density and excess properties of short-chain alcohol aqueous solutions: A simplified model simulation study. J Chem Phys 2018; 146:144503. [PMID: 28411617 DOI: 10.1063/1.4979806] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We perform an extensive computational study of binary mixtures of water and short-chain alcohols resorting to two-scale potential models to account for the singularities of hydrogen bonded liquids. Water molecules are represented by a well studied core softened potential which is known to qualitatively account for a large number of water's characteristic anomalies. Along the same lines, alcohol molecules are idealized by dimers in which the hydroxyl groups interact with each other and with water with a core softened potential as well. Interactions involving non-polar groups are all deemed purely repulsive. We find that the qualitative behavior of excess properties (excess volume, enthalpy, and constant pressure heat capacity) agrees with that found experimentally for alcohols such as t-butanol in water. Moreover, we observe that our simple solute under certain conditions acts as a "structure-maker," in the sense that the temperature of maximum density of the bulk water model increases as the solute is added, i.e., the anomalous behavior of the solvent is enhanced by the solute.
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Affiliation(s)
- A P Furlan
- Instituto de Física, Univeridade Federal do Rio Grande do Sul, Caixa Postal 15051, 91501-570 Porto Alegre, Rio Grande do Sul, Brazil
| | - E Lomba
- Instituto de Química Física Rocasolano, CSIC, Serrano 119, E-28006 Madrid, Spain
| | - M C Barbosa
- Instituto de Física, Univeridade Federal do Rio Grande do Sul, Caixa Postal 15051, 91501-570 Porto Alegre, Rio Grande do Sul, Brazil
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31
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Nagasaka M, Yuzawa H, Kosugi N. Intermolecular Interactions of Pyridine in Liquid Phase and Aqueous Solution Studied by Soft X-ray Absorption Spectroscopy. Z PHYS CHEM 2018. [DOI: 10.1515/zpch-2017-1054] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Abstract
Intermolecular interactions of pyridine in liquid and in aqueous solution are studied by using soft X-ray absorption spectroscopy (XAS) at the C, N, and O K-edges. XAS of liquid pyridine shows that the N 1s→π* peak is blue shifted and the C 1s→π* peak of the meta and para sites is red shifted, respectively, as compared with XAS of pyridine gas. These shifts in liquid are smaller than those in clusters, indicating that the intermolecular interaction of liquid pyridine is weaker than that of pyridine cluster, as supported by the combination of quantum chemical calculations of the core excitation and molecular dynamics simulations of the liquid structure. On the other hand, XAS spectra of aqueous pyridine solutions (C5H5N)x(H2O)1−x
measured at different molar fractions show that in the pyridine rich region, x>0.7, the C and N 1s→π* peak energies are not so different from pure liquid pyridine (x=1.0). In this region, antiparallel displaced structures of pyridine molecules are dominant as in pure pyridine liquid. In the O K-edge XAS, the pre-edge peaks sensitive to the hydrogen bond (HB) network of water molecules show the red shift of −0.15 eV from that of bulk water, indicating that small water clusters with no large-scale HB network are formed in the gap space of structured pyridine molecules. In the water rich region, 0.7>x, the N 1s→π* peaks and the O 1s pre-edge peaks are blue shifted, and the C 1s→π* peaks of the meta and para sites are red-shifted by increasing molar fraction of water. The HB network of bulk water is dominant, but quantum chemical calculations indicate that small pyridine clusters with the HB interaction between the H atom in water and the N atom in pyridine are still existent even in very dilute pyridine solutions.
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Affiliation(s)
- Masanari Nagasaka
- Institute for Molecular Science and SOKENDAI (Graduate University for Advanced Studies) , Myodaiji, Okazaki 444-8585 , Japan
| | - Hayato Yuzawa
- Institute for Molecular Science , Myodaiji, Okazaki 444-8585 , Japan
| | - Nobuhiro Kosugi
- Institute for Molecular Science and SOKENDAI (Graduate University for Advanced Studies) , Myodaiji, Okazaki 444-8585 , Japan
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32
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Furukawa K, Judai K. Brownian motion probe for water-ethanol inhomogeneous mixtures. J Chem Phys 2017; 147:244502. [DOI: 10.1063/1.5007813] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Kazuki Furukawa
- Department of Physics, College of Humanities and Sciences, Nihon University, Sakurajosui 3-25-40, Setagaya-ku, Tokyo 156-8550, Japan
| | - Ken Judai
- Department of Physics, College of Humanities and Sciences, Nihon University, Sakurajosui 3-25-40, Setagaya-ku, Tokyo 156-8550, Japan
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33
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Trumm M, Adam C, Koke C, Maiwald M, Höfener S, Skerencak-Frech A, Panak PJ, Schimmelpfennig B. The influence of polarity in binary solvent mixtures on the conformation of bis-triazinyl-pyridine in solution. Mol Phys 2017. [DOI: 10.1080/00268976.2017.1406163] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- Michael Trumm
- Institut für Nukleare Entsorgung (INE), Karlsruher Institut für Technologie, Karlsruhe, Germany
| | - Christian Adam
- Institut für Nukleare Entsorgung (INE), Karlsruher Institut für Technologie, Karlsruhe, Germany
| | - Carsten Koke
- Institut für Nukleare Entsorgung (INE), Karlsruher Institut für Technologie, Karlsruhe, Germany
- Physikalisch-Chemisches Institut, Ruprecht Karls Universität Heidelberg, Heidelberg, Germany
| | - Martin Maiwald
- Institut für Nukleare Entsorgung (INE), Karlsruher Institut für Technologie, Karlsruhe, Germany
- Physikalisch-Chemisches Institut, Ruprecht Karls Universität Heidelberg, Heidelberg, Germany
| | - Sebastian Höfener
- Institut für Physikalische Chemie, Karlsruher Institut für Technologie, Karlsruhe, Germany
| | - Andrej Skerencak-Frech
- Institut für Nukleare Entsorgung (INE), Karlsruher Institut für Technologie, Karlsruhe, Germany
- Physikalisch-Chemisches Institut, Ruprecht Karls Universität Heidelberg, Heidelberg, Germany
| | - Petra J. Panak
- Institut für Nukleare Entsorgung (INE), Karlsruher Institut für Technologie, Karlsruhe, Germany
- Physikalisch-Chemisches Institut, Ruprecht Karls Universität Heidelberg, Heidelberg, Germany
| | - Bernd Schimmelpfennig
- Institut für Nukleare Entsorgung (INE), Karlsruher Institut für Technologie, Karlsruhe, Germany
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34
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Nagasaka M, Yuzawa H, Kosugi N. Interaction between Water and Alkali Metal Ions and Its Temperature Dependence Revealed by Oxygen K-Edge X-ray Absorption Spectroscopy. J Phys Chem B 2017; 121:10957-10964. [PMID: 29131955 DOI: 10.1021/acs.jpcb.7b09789] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Interaction between water molecules and alkali metal ions in aqueous salt solutions has been studied by the oxygen K-edge soft X-ray absorption spectroscopy (XAS) in transmission mode. In the measurement of several alkali halide aqueous solutions with different alkali chlorides (Li, Na, and K) and different sodium halides (Cl, Br, and I), the pre-edge component arising from the hydration water molecules shows a blue shift in peak energy as strongly depending on cations but not on anions. In the temperature dependent measurement, the pre-edge component arising from water molecules beyond the first hydration shell shows the same behavior as that of pure liquid water. On the other hand, the pre-edge component arising from water molecules in the first hydration shell of Li+ ions is not evidently dependent on the temperature, indicating that the hydration water molecules are more strongly bound with Li+ ions than the other water molecules. These experimental results are supported by the results of radial distribution functions of the first hydration shell and their temperature dependence, evaluated by molecular dynamics simulations.
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Affiliation(s)
- Masanari Nagasaka
- Institute for Molecular Science , Myodaiji, Okazaki 444-8585, Japan.,SOKENDAI (Graduate University for Advanced Studies) , Myodaiji, Okazaki 444-8585, Japan
| | - Hayato Yuzawa
- Institute for Molecular Science , Myodaiji, Okazaki 444-8585, Japan
| | - Nobuhiro Kosugi
- Institute for Molecular Science , Myodaiji, Okazaki 444-8585, Japan.,SOKENDAI (Graduate University for Advanced Studies) , Myodaiji, Okazaki 444-8585, Japan
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35
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Smith JW, Saykally RJ. Soft X-ray Absorption Spectroscopy of Liquids and Solutions. Chem Rev 2017; 117:13909-13934. [DOI: 10.1021/acs.chemrev.7b00213] [Citation(s) in RCA: 82] [Impact Index Per Article: 11.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Affiliation(s)
- Jacob W. Smith
- Department of Chemistry, University of California, Berkeley, California 94720, United States
- Chemical Sciences Division, Lawrence Berkeley National Lab, Berkeley, California 94720, United States
| | - Richard J. Saykally
- Department of Chemistry, University of California, Berkeley, California 94720, United States
- Chemical Sciences Division, Lawrence Berkeley National Lab, Berkeley, California 94720, United States
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36
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Ikeno H, Mizoguchi T. Basics and applications of ELNES calculations. Microscopy (Oxf) 2017; 66:305-327. [PMID: 29016924 DOI: 10.1093/jmicro/dfx033] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2017] [Accepted: 08/23/2017] [Indexed: 06/07/2023] Open
Abstract
The electron energy loss near edge structures (ELNES) appearing in an electron energy loss spectrum obtained through transmission electron microscopy (TEM) have the potential to unravel atomic and electronic structures with sub-nano meter resolution. For this reason, TEM-ELNES has become one of the most powerful analytical methods in materials research. On the other hand, theoretical calculations are indispensable in interpreting the ELNES spectrum. Here, the basics and applications of one-particle, two-particle and multi-particle ELNES calculations are reviewed. A key point for the ELNES calculation is the proper introduction of the core-hole effect. Some applications of one-particle ELNES calculations to huge systems of more than 1000 atoms, and complex systems, such as liquids, are reported. In the two-particle calculations, the importance of the correct treatment of the excitonic interaction is demonstrated in calculating the low-energy ELNES, for example at the Li-K edge. In addition, an unusually strong excitonic interactions in the O-K edge of perovskite oxides is identified. The multi-particle calculations are necessary to reproduce the multiplet structures appearing at the transition metal L2,3-edges and rare-earth M4,5-edges. Applications to dilute magnetic semiconductors and Li-ion battery materials are presented. Furthermore, beyond the 'conventional' ELNES calculations, theoretical calculations of electron/X-ray magnetic circular dichroism (MCD) and the vibrational information in ELNES, are reported.
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Affiliation(s)
- Hidekazu Ikeno
- Nanoscience and Nanotechnology Research Center, Research Organization for the 21st Century, Osaka Prefecture University, 1-2 Gakuen-cho, Naka-ku, Sakai Osaka 599-8570, Japan
- JST, PRESTO, 4-1-8 Hon-cho, Kawaguchi, Saitama 332-0012, Japan
| | - Teruyasu Mizoguchi
- JST, PRESTO, 4-1-8 Hon-cho, Kawaguchi, Saitama 332-0012, Japan
- Institute of Industrial Science, The University of Tokyo, 4-6-1, Komaba, Meguro, Tokyo 153-8505, Japan
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Mizoguchi T, Miyata T, Olovsson W. Excitonic, vibrational, and van der Waals interactions in electron energy loss spectroscopy. Ultramicroscopy 2017; 180:93-103. [DOI: 10.1016/j.ultramic.2017.03.003] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2016] [Revised: 02/21/2017] [Accepted: 03/01/2017] [Indexed: 11/16/2022]
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38
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Yu Y, Fan W, Wang Y, Zhou X, Sun J, Liu S. C–H···O Interaction in Methanol–Water Solution Revealed from Raman Spectroscopy and Theoretical Calculations. J Phys Chem B 2017; 121:8179-8187. [DOI: 10.1021/acs.jpcb.7b06036] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Yuanqin Yu
- Department of Physics, Anhui University, Hefei, Anhui, 230601, China
| | - Wei Fan
- Hefei National Laboratory for Physical Sciences at the Microscale,
iChEM (Collaborative Innovation Center of Chemistry for Energy Materials),
Department of Chemical Physics, University of Science and Technology of China, Hefei 230026, China
| | - Yuxi Wang
- Hefei National Laboratory for Physical Sciences at the Microscale,
iChEM (Collaborative Innovation Center of Chemistry for Energy Materials),
Department of Chemical Physics, University of Science and Technology of China, Hefei 230026, China
| | - Xiaoguo Zhou
- Hefei National Laboratory for Physical Sciences at the Microscale,
iChEM (Collaborative Innovation Center of Chemistry for Energy Materials),
Department of Chemical Physics, University of Science and Technology of China, Hefei 230026, China
| | - Jin Sun
- Department of Physics, Anhui University, Hefei, Anhui, 230601, China
| | - Shilin Liu
- Hefei National Laboratory for Physical Sciences at the Microscale,
iChEM (Collaborative Innovation Center of Chemistry for Energy Materials),
Department of Chemical Physics, University of Science and Technology of China, Hefei 230026, China
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Abstract
Whisky is distilled to around 70% alcohol by volume (vol-%) then diluted to about 40 vol-%, and often drunk after further slight dilution to enhance its taste. The taste of whisky is primarily associated with amphipathic molecules, such as guaiacol, but why and how dilution enhances the taste is not well understood. We carried out computer simulations of water-ethanol mixtures in the presence of guaiacol, providing atomistic details on the structure of the liquid mixture. We found that guaiacol is preferentially associated with ethanol, and, therefore, primarily found at the liquid-air interface in mixtures that contain up to 45 vol-% of ethanol. At ethanol concentrations of 59 vol-% or higher, guaiacol is increasingly surrounded by ethanol molecules and is driven to the bulk. This indicates that the taste of guaiacol in the whisky would be enhanced upon dilution prior to bottling. Our findings may apply to other flavour-giving amphipathic molecules and could contribute to optimising the production of spirits for desired tastes. Furthermore, it sheds light on the molecular structure of water-alcohol mixtures that contain small solutes, and reveals that interactions with the water may be negligible already at 89 vol-% of ethanol.
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40
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Marinho RRT, Walz MM, Ekholm V, Öhrwall G, Björneholm O, de Brito AN. Ethanol Solvation in Water Studied on a Molecular Scale by Photoelectron Spectroscopy. J Phys Chem B 2017; 121:7916-7923. [PMID: 28715892 DOI: 10.1021/acs.jpcb.7b02382] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Because of the amphiphilic properties of alcohols, hydrophobic hydration is important in the alcohol-water system. In the present paper we employ X-ray photoelectron spectroscopy (XPS) to investigate the bulk and surface molecular structure of ethanol-water mixtures from 0.2 to 95 mol %. The observed XPS binding energy splitting between the methyl C 1s and hydroxymethyl C 1s groups (BES_[CH3-CH2OH]) as a function of the ethanol molar percentage can be divided into different regions: one below 35 mol % with higher values (about 1.53 eV) and one starting at 60 mol % up to 95 mol % with 1.49 eV as an average value. The chemical shifts agree with previous quantum mechanics/molecular mechanics (QM/MM) calculations [ Löytynoja , T. ; J. Phys. Chem. B 2014 , 118 , 13217 ]. According to these calculations, the BES_[CH3-CH2OH] is related to the number of hydrogen bonds between the ethanol and the surrounding molecules. As the ethanol concentration increases, the average number of hydrogen bonds decreases from 2.5 for water-rich mixtures to 2 for pure ethanol. We give an interpretation for this behavior based on how the hydrogen bonds are distributed according to the mixing ratio. Since our experimental data are surface sensitive, we propose that this effect may also be manifested at the interface. From the ratio between the XPS C 1s core lines intensities we infer that below 20 mol % the ethanol molecules have their hydroxyl groups more hydrated and possibly facing the solution's bulk. Between 0.1 and 14 mol %, we show the formation of an ethanol monolayer at approximately 2 mol %. Several parameters are derived for the surface region at monolayer coverage.
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Affiliation(s)
- Ricardo R T Marinho
- Institute of Physics, Federal University of Bahia , 40.170-115, Salvador, BA, Brazil
| | - Marie-Madeleine Walz
- Department of Physics and Astronomy, Uppsala University , P.O. Box 516, SE-751 20 Uppsala, Sweden.,Department of Cell and Molecular Biology, Computer and Systems Biology , P.O. Box 596, SE-751 24, Uppsala, Sweden
| | - Victor Ekholm
- Department of Physics and Astronomy, Uppsala University , P.O. Box 516, SE-751 20 Uppsala, Sweden
| | - Gunnar Öhrwall
- MAX IV Laboratory, Lund University , P.O. Box 118, SE-221 00 Lund, Sweden
| | - Olle Björneholm
- Department of Physics and Astronomy, Uppsala University , P.O. Box 516, SE-751 20 Uppsala, Sweden
| | - Arnaldo Naves de Brito
- Institute of Physics "Gleb Wataghin", University of Campinas , 13083-859 Campinas, SP, Brazil
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41
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Nagasaka M, Ohigashi T, Kosugi N. Development of In-Situ/Operando Sample Cells for Soft X-ray Transmission Spectromicroscopy at UVSOR-III Synchrotron. ACTA ACUST UNITED AC 2017. [DOI: 10.1080/08940886.2017.1289798] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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Albertí M, Amat A, Aguilar A, Pirani F. Methanol–methanol and methanol–water systems: the intermolecular interactions controlling the transition from small clusters to the liquid phase. Phys Chem Chem Phys 2017. [DOI: 10.1039/c7cp02919e] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The present paper focuses on the characterization of the properties of methanol and water molecules in gas and liquid enviroments.
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Affiliation(s)
- Margarita Albertí
- IQTCUB
- Departament de Ciència de Materials i Química Física
- Universitat de Barcelona
- 08028 Barcelona
- Spain
| | - Anna Amat
- Computational Laboratory for Hybrid/Organic Photovoltaics (CLHYO)
- CNR-ISTM
- 06123 Perugia
- Italy
| | - Antonio Aguilar
- IQTCUB
- Departament de Ciència de Materials i Química Física
- Universitat de Barcelona
- 08028 Barcelona
- Spain
| | - Fernando Pirani
- Dipartimento di Chimica
- Biologia e Biotecnologie
- Università di Perugia
- 06123 Perugia and Istituto di Nanotecnologia (CNR, NANOTEC)
- 70126 Bari
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44
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Thermally-nucleated self-assembly of water and alcohol into stable structures at hydrophobic interfaces. Nat Commun 2016; 7:13064. [PMID: 27713413 PMCID: PMC5059760 DOI: 10.1038/ncomms13064] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2016] [Accepted: 08/31/2016] [Indexed: 11/17/2022] Open
Abstract
At the interface with solids, the mobility of liquid molecules tends to be reduced compared with bulk, often resulting in increased local order due to interactions with the surface of the solid. At room temperature, liquids such as water and methanol can form solvation structures, but the molecules remain highly mobile, thus preventing the formation of long-lived supramolecular assemblies. Here we show that mixtures of water with methanol can form a novel type of interfaces with hydrophobic solids. Combining in situ atomic force microscopy and multiscale molecular dynamics simulations, we identify solid-like two-dimensional interfacial structures that nucleate thermally, and are held together by an extended network of hydrogen bonds. On graphite, nucleation occurs above ∼35 °C, resulting in robust, multilayered nanoscopic patterns. Our findings could have an impact on many fields where water-alcohol mixtures play an important role such as fuel cells, chemical synthesis, self-assembly, catalysis and surface treatments. Alcohol-water mixtures are characterized by the existence of segregated clusters, whose dynamics are too fast to be investigated in bulk solution. Here, Voïtchovsky et al. show the formation of stable two-dimensional water-alcohol wire-like structures via H-bonds on graphite surface at room temperature.
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45
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Bouazizi S, Nasr S. Effect of solvent composition on the structural and dynamical properties of sodium chloride solutions in water-methanol mixtures. J Mol Liq 2016. [DOI: 10.1016/j.molliq.2016.06.023] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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46
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Brandenburg T, Golnak R, Nagasaka M, Atak K, Sreekantan Nair Lalithambika S, Kosugi N, Aziz EF. Impacts of Conformational Geometries in Fluorinated Alkanes. Sci Rep 2016; 6:31382. [PMID: 27527753 PMCID: PMC4985654 DOI: 10.1038/srep31382] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2016] [Accepted: 07/20/2016] [Indexed: 01/21/2023] Open
Abstract
Research of blood substitute formulations and their base materials is of high scientific interest. Especially fluorinated microemulsions based on perfluorocarbons, with their interesting chemical properties, offer opportunities for applications in biomedicine and physical chemistry. In this work, carbon K-edge absorption spectra of liquid perfluoroalkanes and their parent hydrocarbons are presented and compared. Based on soft X-ray absorption, a comprehensive picture of the electronic structure is provided with the aid of time dependent density functional theory. We have observed that conformational geometries mainly influence the chemical and electronic interactions in the presented liquid materials, leading to a direct association of conformational geometries to the dissolving capacity of the presented perfluorocarbons with other solvents like water and possibly gases like oxygen.
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Affiliation(s)
- Tim Brandenburg
- Institute of Methods for Material Development, Helmholtz-Zentrum Berlin für Materialien und Energie, Albert-Einstein-Straße 15, 12489 Berlin, Germany
- Department of Physics, Freie Universität Berlin, Arnimallee 14, 14195 Berlin, Germany
| | - Ronny Golnak
- Institute of Methods for Material Development, Helmholtz-Zentrum Berlin für Materialien und Energie, Albert-Einstein-Straße 15, 12489 Berlin, Germany
| | | | - Kaan Atak
- Institute of Methods for Material Development, Helmholtz-Zentrum Berlin für Materialien und Energie, Albert-Einstein-Straße 15, 12489 Berlin, Germany
- Department of Physics, Freie Universität Berlin, Arnimallee 14, 14195 Berlin, Germany
| | - Sreeju Sreekantan Nair Lalithambika
- Institute of Methods for Material Development, Helmholtz-Zentrum Berlin für Materialien und Energie, Albert-Einstein-Straße 15, 12489 Berlin, Germany
- Department of Physics, Freie Universität Berlin, Arnimallee 14, 14195 Berlin, Germany
| | - Nobuhiro Kosugi
- Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan
| | - Emad F. Aziz
- Institute of Methods for Material Development, Helmholtz-Zentrum Berlin für Materialien und Energie, Albert-Einstein-Straße 15, 12489 Berlin, Germany
- Department of Physics, Freie Universität Berlin, Arnimallee 14, 14195 Berlin, Germany
- Institute for Molecular Science, Myodaiji, Okazaki 444-8585, Japan
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47
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Katsukura H, Miyata T, Tomita K, Mizoguchi T. Effect of the van der Waals interaction on the electron energy-loss near edge structure theoretical calculation. Ultramicroscopy 2016; 178:88-95. [PMID: 27477916 DOI: 10.1016/j.ultramic.2016.07.012] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2016] [Revised: 07/07/2016] [Accepted: 07/18/2016] [Indexed: 11/28/2022]
Abstract
The effect of the van der Waals (vdW) interaction on the simulation of the electron energy-loss near edge structure (ELNES) by a first-principles band-structure calculation is reported. The effect of the vdW interaction is considered by the Tkatchenko-Scheffler scheme, and the change of the spectrum profile and the energy shift are discussed. We perform calculations on systems in the solid, liquid and gaseous states. The transition energy shifts to lower energy by approximately 0.1eV in the condensed (solid and liquid) systems by introducing the vdW effect into the calculation, whereas the energy shift in the gaseous models is negligible owing to the long intermolecular distance. We reveal that the vdW interaction exhibits a larger effect on the excited state than the ground state owing to the presence of an excited electron in the unoccupied band. Moreover, the vdW effect is found to depend on the local electron density and the molecular coordination. In addition, this study suggests that the detection of the vdW interactions exhibited within materials is possible by a very stable and high resolution observation.
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Affiliation(s)
- Hirotaka Katsukura
- Institute of Industrial Science, The University of Tokyo, 4-6-1 Komaba, Meguro, Tokyo 153-8505, Japan
| | - Tomohiro Miyata
- Institute of Industrial Science, The University of Tokyo, 4-6-1 Komaba, Meguro, Tokyo 153-8505, Japan
| | - Kota Tomita
- Institute of Industrial Science, The University of Tokyo, 4-6-1 Komaba, Meguro, Tokyo 153-8505, Japan
| | - Teruyasu Mizoguchi
- Institute of Industrial Science, The University of Tokyo, 4-6-1 Komaba, Meguro, Tokyo 153-8505, Japan.
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48
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Mochizuki K, Pattenaude SR, Ben-Amotz D. Influence of Cononsolvency on the Aggregation of Tertiary Butyl Alcohol in Methanol–Water Mixtures. J Am Chem Soc 2016; 138:9045-8. [PMID: 27363494 DOI: 10.1021/jacs.6b04914] [Citation(s) in RCA: 43] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Kenji Mochizuki
- Research
Institute for Interdisciplinary Science, Okayama university, Okayama 700-8530, Japan
| | - Shannon R. Pattenaude
- Department
of Chemistry, Purdue University, West Lafayette, Indiana 47907, United States
| | - Dor Ben-Amotz
- Department
of Chemistry, Purdue University, West Lafayette, Indiana 47907, United States
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49
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Mallamace F, Corsaro C, Mallamace D, Vasi C, Vasi S, Stanley HE. Dynamical properties of water-methanol solutions. J Chem Phys 2016; 144:064506. [PMID: 26874496 DOI: 10.1063/1.4941414] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
We study the relaxation times tα in the water-methanol system. We examine new data and data from the literature in the large temperature range 163 < T < 335 K obtained using different experimental techniques and focus on how tα affects the hydrogen bond structure of the system and the hydrophobicity of the alcohol methyl group. We examine the relaxation times at a fixed temperature as a function of the water molar fraction XW and observe two opposite behaviors in their curvature when the system moves from high to low T regimes. This behavior differs from that of an ideal solution in that it has excess values located at different molar fractions (XW = 0.5 for high T and 0.75 in the deep supercooled regime). We analyze the data and find that above a crossover temperature T ∼ 223 K, hydrophobicity plays a significant role and below it the water tetrahedral network dominates. This temperature is coincident with the fragile-to-strong dynamical crossover observed in confined water and supports the liquid-liquid phase transition hypothesis. At the same time, the reported data suggest that this crossover temperature (identified as the Widom line temperature) also depends on the alcohol concentration.
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Affiliation(s)
- Francesco Mallamace
- Dipartimento MIFT, Sezione di Fisica, Università di Messina, I-98166 Messina, Italy
| | - Carmelo Corsaro
- Dipartimento MIFT, Sezione di Fisica, Università di Messina, I-98166 Messina, Italy
| | - Domenico Mallamace
- Consorzio per lo Sviluppo dei Sistemi a Grande Interfase, Unità di Catania, I-95125 Catania, Italy
| | - Cirino Vasi
- Consiglio Nazionale delle Ricerche-IPCF Messina, I-98158 Messina, Italy
| | - Sebastiano Vasi
- Dipartimento MIFT, Sezione di Fisica, Università di Messina, I-98166 Messina, Italy
| | - H Eugene Stanley
- Center for Polymer Studies and Department of Physics, Boston University, Boston, Massachusetts 02215, USA
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50
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Fransson T, Harada Y, Kosugi N, Besley NA, Winter B, Rehr JJ, Pettersson LGM, Nilsson A. X-ray and Electron Spectroscopy of Water. Chem Rev 2016; 116:7551-69. [PMID: 27244473 DOI: 10.1021/acs.chemrev.5b00672] [Citation(s) in RCA: 113] [Impact Index Per Article: 14.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
Here we present an overview of recent developments of X-ray and electron spectroscopy to probe water at different temperatures. Photon-induced ionization followed by detection of electrons from either the O 1s level or the valence band is the basis of photoelectron spectroscopy. Excitation between the O 1s and the unoccupied states or occupied states is utilized in X-ray absorption and X-ray emission spectroscopies. These techniques probe the electronic structure of the liquid phase and show sensitivity to the local hydrogen-bonding structure. Both experimental aspects related to the measurements and theoretical simulations to assist in the interpretation are discussed in detail. Different model systems are presented such as the different bulk phases of ice and various adsorbed monolayer structures on metal surfaces.
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Affiliation(s)
- Thomas Fransson
- Department of Physics, Chemistry and Biology, Linköping University , S-581 83 Linköping, Sweden
| | - Yoshihisa Harada
- Institute for Solid State Physics (ISSP), The University of Tokyo , Kashiwanoha, Kashiwa, Chiba 277-8581, Japan
| | - Nobuhiro Kosugi
- Institute for Molecular Science , Myodaiji, Okazaki 444-8585, Japan
| | - Nicholas A Besley
- Department of Physical and Theoretical Chemistry, School of Chemistry, The University of Nottingham , University Park, Nottingham NG7 2RD, United Kingdom
| | - Bernd Winter
- Institute of Methods for Material Development, Helmholtz Center Berlin , Albert-Einstein-Strasse 15, D-12489 Berlin, Germany
| | - John J Rehr
- Department of Physics, University of Washington , Seattle, Washington 98195, United States
| | - Lars G M Pettersson
- Department of Physics, AlbaNova University Center, Stockholm University , S-106 91 Stockholm, Sweden
| | - Anders Nilsson
- Department of Physics, AlbaNova University Center, Stockholm University , S-106 91 Stockholm, Sweden
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