In Depth Analysis of the Quenching of Three Fluorene–Phenylene-Based Cationic Conjugated Polyelectrolytes by DNA and DNA Bases

Main-Chain Cationic Polyelectrolytes: Design, Synthesis, and Applications

Polyelectrolytes have attracted a lot of attention spanning across disciplines, including polymer chemistry, materials chemistry, chemical biology, chemical engineering, as well as device physics, as a result of their widespread applications in sensing, biomedicine, food industry, wastewater treatment, optoelectronic devices, and renewable energy. In this review, we focus on the crucial synthetic strategies of structurally different classes of main-chain cationic polyelectrolytes. As a result of the presence of charged moieties in the main polymeric backbone, their solubility and photophysical properties can be easily tuned. Main-chain cationic polyelectrolytes provide various unique characteristics, including solubility in aqueous and organic solvents, easy processability, ease of film formation, ionic interaction, main-chain-directed charge transport, high conductivity, and aggregation. These properties make the main-chain polyelectrolyte a potential candidate for numerous applications ranging from chemo- and biosensing, antibacterial activity, optoelectronics, electrocatalysis, water splitting, ion conduction, to dye-sensitized solar cells.

Self-assembly and hybridization mechanisms of DNA with cationic polythiophene

The combination of DNA and π-conjugated polyelectrolytes (CPEs) represents a promising approach to develop DNA hybridization biosensors, with potential applications for instance in the detection of DNA lesions and single-nucleotide polymorphisms. Here we exploit the remarkable optical properties of a cationic poly[3-(6'-(trimethylphosphonium)hexyl)thiophene-2,5-diyl] (CPT) to decipher the self-assembly of DNA and CPT. The ssDNA/CPT complexes have chiroptical signatures in the CPT absorption region that are strongly dependent on the DNA sequence, which we relate to differences in supramolecular interactions between the thiophene monomers and the various nucleobases. By studying DNA-DNA hybridization and melting processes on preformed ssDNA/CPT complexes, we observe sequence-dependent mechanisms that can yield DNA-condensed aggregates. Heating-cooling cycles show that non-equilibrium mixtures can form, noticeably depending on the working sequence of the hybridization experiment. These results are of high importance for the use of π-conjugated polyelectrolytes in DNA hybridization biosensors and in polyplexes.