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Vogt E, Jensen CV, Kjaergaard HG. Effect of Temperature on the OH-Stretching Bands of the Methanol Dimer. J Phys Chem A 2024; 128:392-400. [PMID: 38179925 DOI: 10.1021/acs.jpca.3c06456] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2024]
Abstract
We present a conceptually simple model for understanding the significant spectral changes that occur with the temperature in the infrared spectra of hydrogen-bound complexes. We have measured room-temperature spectra of the methanol dimer and two deuterated isotopologues in the OH(D)-stretching region. We correctly predict spectral changes observed in the gas phase for the bound OH stretch in the methanol dimer from jet-cooled to room temperature and corroborate this with experimental and theoretical results for deuterated isotopologues. The origin of the observed spectral features is explained based on a reduced-dimensional vibrational model, which includes the two high-frequency OH stretches, the two methyl torsions, and the six intermolecular low-frequency vibrations. Key to the success of the model is a new coordinate definition to describe the intrinsic large-amplitude curvilinear motion of low-frequency vibrations. Despite the deceivingly simple appearance of the room temperature bound OH-stretching fundamental band, it consists of ∼107 vibrational transitions.
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Affiliation(s)
- Emil Vogt
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen Ø, Denmark
| | - Casper Vindahl Jensen
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen Ø, Denmark
| | - Henrik G Kjaergaard
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen Ø, Denmark
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2
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Lwin E, Fischer TL, Suhm MA. Microhydration of Tertiary Amines: Robust Resonances in Red-Shifted Water. J Phys Chem Lett 2023; 14:10194-10199. [PMID: 37930195 PMCID: PMC10658632 DOI: 10.1021/acs.jpclett.3c02517] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2023] [Revised: 10/29/2023] [Accepted: 11/01/2023] [Indexed: 11/07/2023]
Abstract
Tertiary amines are strong hydrogen bond acceptors. When a water molecule donates one of the OH groups, its in-phase stretching vibration wavenumber is decreased to such an extent that it comes close to the water bending overtone. This gives rise to anharmonic phenomena such as classical Fermi resonance, resonance with multiple-quantum dark states, or combination transitions with low-frequency intermolecular modes. These effects, which contribute to the spectral breadth of room-temperature hydrogen-bonded amine complexes, are disentangled by Fourier transform infrared spectroscopy in pulsed supersonic slit jet expansions. Monohydrates of the amines quinuclidine, N-methylpyrrolidine, N-methylpiperidine, and dimethylcyclohexylamine exhibit systematic mode coupling signatures. These suggest relatively fast energy flow out of the excited OH stretching fundamental into intra- and intermolecular degrees of freedom of the hydrogen-bonded water molecule. Trimeric complexes are spectroscopically separated from the amine monohydrates.
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Affiliation(s)
- Eaindra Lwin
- Institute of Physical Chemistry, University of Göttingen, Tammannstrasse 6, 37077 Göttingen, Germany
| | - Taija L. Fischer
- Institute of Physical Chemistry, University of Göttingen, Tammannstrasse 6, 37077 Göttingen, Germany
| | - Martin A. Suhm
- Institute of Physical Chemistry, University of Göttingen, Tammannstrasse 6, 37077 Göttingen, Germany
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3
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Vogt E, Simkó I, Császár AG, Kjaergaard HG. Reduced-dimensional vibrational models of the water dimer. J Chem Phys 2022; 156:164304. [PMID: 35490001 DOI: 10.1063/5.0090013] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
A model based on the finite-basis representation of a vibrational Hamiltonian expressed in internal coordinates is developed. The model relies on a many-mode, low-order expansion of both the kinetic energy operator and the potential energy surface (PES). Polyad truncations and energy ceilings are used to control the size of the vibrational basis to facilitate accurate computations of the OH stretch and HOH bend intramolecular transitions of the water dimer (H2 16O)2. Advantages and potential pitfalls of the applied approximations are highlighted. The importance of choices related to the treatment of the kinetic energy operator in reduced-dimensional calculations and the accuracy of different water dimer PESs are discussed. A range of different reduced-dimensional computations are performed to investigate the wavenumber shifts in the intramolecular transitions caused by the coupling between the intra- and intermolecular modes. With the use of symmetry, full 12-dimensional vibrational energy levels of the water dimer are calculated, predicting accurately the experimentally observed intramolecular fundamentals. It is found that one can also predict accurate intramolecular transition wavenumbers for the water dimer by combining a set of computationally inexpensive reduced-dimensional calculations, thereby guiding future effective-Hamiltonian treatments.
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Affiliation(s)
- Emil Vogt
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen Ø, Denmark
| | - Irén Simkó
- Laboratory of Molecular Structure and Dynamics, Institute of Chemistry, ELTE Eötvös Loránd University, Pázmány Péter Sétány 1/A, H-1117 Budapest, Hungary
| | - Attila G Császár
- Laboratory of Molecular Structure and Dynamics, Institute of Chemistry, ELTE Eötvös Loránd University, Pázmány Péter Sétány 1/A, H-1117 Budapest, Hungary
| | - Henrik G Kjaergaard
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen Ø, Denmark
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4
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Vogt E, Kjaergaard HG. Vibrational Spectroscopy of the Water Dimer at Jet-Cooled and Atmospheric Temperatures. Annu Rev Phys Chem 2022; 73:209-231. [PMID: 35044791 DOI: 10.1146/annurev-physchem-082720-104659] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
The vibrational spectroscopy of the water dimer provides an understanding of basic hydrogen bonding in water clusters, and with about one water dimer for every 1,000 water molecules, it plays a critical role in atmospheric science. Here, we review how the experimental and theoretical progress of the past decades has improved our understanding of water dimer vibrational spectroscopy under both cold and warm conditions. We focus on the intramolecular OH-stretching transitions of the donor unit, because these are the ones mostly affected by dimer formation and because their assignment has proven a challenge. We review cold experimental results from early matrix isolation to recent mass-selected jet expansion techniques and, in parallel, the improvements in the theoretical anharmonic models. We discuss and illustrate changes in the vibrational spectra of complexes upon increasing temperature, and the difficulties in recording and calculating these spectra. In the atmosphere, water dimer spectra at ambient temperature are crucial. Expected final online publication date for the Annual Review of Physical Chemistry, Volume 73 is April 2022. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
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Affiliation(s)
- Emil Vogt
- Department of Chemistry, University of Copenhagen, Copenhagen, Denmark;
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5
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Hansen AS, Vogt E, Kjaergaard HG. Gibbs energy of complex formation – combining infrared spectroscopy and vibrational theory. INT REV PHYS CHEM 2019. [DOI: 10.1080/0144235x.2019.1608689] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Affiliation(s)
- Anne S. Hansen
- Department of Chemistry, University of Copenhagen, Copenhagen Ø, Denmark
| | - Emil Vogt
- Department of Chemistry, University of Copenhagen, Copenhagen Ø, Denmark
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6
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7
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Mackeprang K, Vogt E, Lisy JM, Kjaergaard HG. Fundamental FH-stretching transition frequencies and oscillator strengths in hydrogen bonded FH complexes. Chem Phys Lett 2018. [DOI: 10.1016/j.cplett.2017.12.019] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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8
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Howard JC, Gray JL, Hardwick AJ, Nguyen LT, Tschumper GS. Getting down to the Fundamentals of Hydrogen Bonding: Anharmonic Vibrational Frequencies of (HF)2 and (H2O)2 from Ab Initio Electronic Structure Computations. J Chem Theory Comput 2014; 10:5426-35. [DOI: 10.1021/ct500860v] [Citation(s) in RCA: 53] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- J. Coleman Howard
- Department of Chemistry and
Biochemistry, University of Mississippi, University, Mississippi 38677-1848 United States
| | - Jessica L. Gray
- Department of Chemistry and
Biochemistry, University of Mississippi, University, Mississippi 38677-1848 United States
| | - Amanda J. Hardwick
- Department of Chemistry and
Biochemistry, University of Mississippi, University, Mississippi 38677-1848 United States
| | - Linh T. Nguyen
- Department of Chemistry and
Biochemistry, University of Mississippi, University, Mississippi 38677-1848 United States
| | - Gregory S. Tschumper
- Department of Chemistry and
Biochemistry, University of Mississippi, University, Mississippi 38677-1848 United States
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9
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Mackeprang K, Kjaergaard HG, Salmi T, Hänninen V, Halonen L. The effect of large amplitude motions on the transition frequency redshift in hydrogen bonded complexes: A physical picture. J Chem Phys 2014; 140:184309. [DOI: 10.1063/1.4873420] [Citation(s) in RCA: 41] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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10
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Bork N, Loukonen V, Kjaergaard HG, Vehkamäki H. Resolving the anomalous infrared spectrum of the MeCN–HCl molecular cluster using ab Initio molecular dynamics. Phys Chem Chem Phys 2014; 16:24685-90. [DOI: 10.1039/c4cp03828b] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Molecular dynamics simulations reveal that the asymmetric peak seen in IR spectra of acetonitrile–HCl molecular complexes are due to high population of complexes with partially broken hydrogen bonds.
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Affiliation(s)
- Nicolai Bork
- Department of Physics
- University of Helsinki
- FI-00014 Helsinki, Finland
- Department of Chemistry
- University of Copenhagen
| | - Ville Loukonen
- Department of Physics
- University of Helsinki
- FI-00014 Helsinki, Finland
| | | | - Hanna Vehkamäki
- Department of Physics
- University of Helsinki
- FI-00014 Helsinki, Finland
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11
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Anglada JM, Hoffman GJ, Slipchenko LV, M.Costa M, Ruiz-López MF, Francisco JS. Atmospheric Significance of Water Clusters and Ozone–Water Complexes. J Phys Chem A 2013; 117:10381-96. [DOI: 10.1021/jp407282c] [Citation(s) in RCA: 86] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Josep M. Anglada
- Departament
de Química Biològica i Modelització Molecular, IQAC−CSIC, c/Jordi Girona 18, E-08034 Barcelona, Spain
| | - Gerald J. Hoffman
- Department
of Chemistry, Edinboro University of Pennsylvania, Edinboro, Pennsylvania 16444, United States
| | - Lyudmila V. Slipchenko
- Department
of Chemistry, Purdue University, West Lafayette, Indiana 47907-2084, United States
| | - Marilia M.Costa
- Equipe
de Chimie et Biochimie Théoriques, SRSMC, University of Lorraine, CNRS, BP 70239, 54506 Vandoeuvre-les-Nancy, France
| | - Manuel F. Ruiz-López
- Equipe
de Chimie et Biochimie Théoriques, SRSMC, University of Lorraine, CNRS, BP 70239, 54506 Vandoeuvre-les-Nancy, France
| | - Joseph S. Francisco
- Department
of Chemistry, Purdue University, West Lafayette, Indiana 47907-2084, United States
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12
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Miliordos E, Aprà E, Xantheas SS. Optimal geometries and harmonic vibrational frequencies of the global minima of water clusters (H2O)n, n = 2–6, and several hexamer local minima at the CCSD(T) level of theory. J Chem Phys 2013; 139:114302. [DOI: 10.1063/1.4820448] [Citation(s) in RCA: 95] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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13
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Du L, Mackeprang K, Kjaergaard HG. Fundamental and overtone vibrational spectroscopy, enthalpy of hydrogen bond formation and equilibrium constant determination of the methanol-dimethylamine complex. Phys Chem Chem Phys 2013; 15:10194-206. [PMID: 23695525 DOI: 10.1039/c3cp50243k] [Citation(s) in RCA: 59] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We have measured gas phase vibrational spectra of the bimolecular complex formed between methanol (MeOH) and dimethylamine (DMA) up to about 9800 cm(-1). In addition to the strong fundamental OH-stretching transition we have also detected the weak second overtone NH-stretching transition. The spectra of the complex are obtained by spectral subtraction of the monomer spectra from spectra recorded for the mixture. For comparison, we also measured the fundamental OH-stretching transition in the bimolecular complex between MeOH and trimethylamine (TMA). The enthalpies of hydrogen bond formation (ΔH) for the MeOH-DMA and MeOH-TMA complexes have been determined by measurements of the fundamental OH-stretching transition in the temperature range from 298 to 358 K. The enthalpy of formation is found to be -35.8 ± 3.9 and -38.2 ± 3.3 kJ mol(-1) for MeOH-DMA and MeOH-TMA, respectively, in the 298 to 358 K region. The equilibrium constant (Kp) for the formation of the MeOH-DMA complex has been determined from the measured and calculated transition intensities of the OH-stretching fundamental transition and the NH-stretching second overtone transition. The transition intensities were calculated using an anharmonic oscillator local mode model with dipole moment and potential energy curves calculated using explicitly correlated coupled cluster methods. The equilibrium constant for formation of the MeOH-DMA complex was determined to be 0.2 ± 0.1 atm(-1), corresponding to a ΔG value of about 4.0 kJ mol(-1).
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Affiliation(s)
- Lin Du
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen Ø, Denmark
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14
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Morita M, Takahashi K. Multidimensional local mode calculations for the vibrational spectra of OH−(H2O)2 and OH−(H2O)2·Ar. Phys Chem Chem Phys 2013; 15:14973-85. [DOI: 10.1039/c3cp51903a] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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15
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Morita M, Takahashi K. Multidimensional OH local mode calculations for OH−(H2O)3—Importance of intermode anharmonicity. Phys Chem Chem Phys 2013; 15:114-24. [DOI: 10.1039/c2cp42501g] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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16
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Tennyson J, Barber MJ, Kelly REA. An adiabatic model for calculating overtone spectra of dimers such as (H(2)O)(2). PHILOSOPHICAL TRANSACTIONS. SERIES A, MATHEMATICAL, PHYSICAL, AND ENGINEERING SCIENCES 2012; 370:2656-2674. [PMID: 22547237 DOI: 10.1098/rsta.2011.0243] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
The near-infrared and visible wavelength spectrum of the water dimer is considered to be the major contributor to the so-called water continuum at these wavelengths. However, theoretical models of this spectrum require the simultaneous treatment of both monomer and dimer excitations. A model for treating this problem is proposed which is based upon a Franck-Condon-like separation between the monomer and dimer vibrational motions. In this model, one of the monomers is treated as the chromophore and its absorption is assumed to be given by its, possibly perturbed, vibrational band intensity. The main computational issue is the treatment of separate monomer and dimer motions. Various approaches for obtaining dimer vibration-rotation tunnelling spectra that allow for monomer motion are explored. These approaches include ways of treating the adiabatic separation of dimer vibrational modes from monomer vibrational modes. We classify the adiabatic separation methods under four main approaches: namely fixed-geometry, free-monomer, perturbed-monomer and coupled-monomer methods. The latter being the most computationally expensive as the monomer wave functions are dependent on the dimer coordinates. For each of these approaches, expectation values over the full potential are calculated for the given monomer vibrational wave functions. Various full (named VAP 2pD in the text) and partial (VAP (+p)D) averaging techniques are outlined to calculate the vibrationally averaged, monomer state-dependent, dimer interaction potentials. The computational costs associated with application of these techniques to the water dimer are estimated and the prospects for full calculations based on this approach are assessed.
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Affiliation(s)
- J Tennyson
- Department of Physics and Astronomy, University College London, London WC1E 6BT, UK.
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17
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Du L, Kjaergaard HG. Fourier transform infrared spectroscopy and theoretical study of dimethylamine dimer in the gas phase. J Phys Chem A 2011; 115:12097-104. [PMID: 21950960 DOI: 10.1021/jp206762j] [Citation(s) in RCA: 53] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Dimethylamine (DMA) has been studied by gas-phase Fourier transform infrared (FTIR) spectroscopy. We have identified a spectral transition that is assigned to the DMA dimer. The IR spectra of the dimer in the gas phase are obtained by spectral subtraction of spectra recorded at different pressures. The enthalpy of hydrogen bond formation was obtained for the DMA dimer by temperature-dependence measurements. We complement the experimental results with ab initio and anharmonic local mode model calculations of monomer and dimer. Compared to the monomer, our calculations show that in the dimer the N-H bond is elongated, and the NH-stretching fundamental shifts to a lower wavenumber. More importantly, the weak NH-stretching fundamental transition has a pronounced intensity increase upon complexation. However, the first NH-stretching overtone transition is not favored by the same intensity enhancement, and we do not observe the first NH-stretching overtone of the dimer. On the basis of the measured and calculated intensity of the NH-stretching transition of the dimer, the equilibrium constant for dimerization at room temperature was determined.
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Affiliation(s)
- Lin Du
- Department of Chemistry, University of Copenhagen, Copenhagen Ø, Denmark
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18
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Garden AL, Halonen L, Kjaergaard HG. Widening of the hydrogen bonded OH-streching bands due to the wagging and OO-stretching modes in H2O·H2O. Chem Phys Lett 2011. [DOI: 10.1016/j.cplett.2011.07.051] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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19
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The vibrational spectrum of the water dimer: Comparison between anharmonic ab initio calculations and neon matrix infrared data between 14,000 and 90cm−1. Chem Phys 2011. [DOI: 10.1016/j.chemphys.2011.05.014] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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20
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Biswas A, Saha R, Ghosh A. Two unusual mixed-valent trinuclear CuII2CuI complexes containing copper(i) tribromide dianion as bridging ligand: Identification of an unprecedented doubly hydrogen-bonded water dimer. CrystEngComm 2011. [DOI: 10.1039/c0ce00784f] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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21
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Kuyanov-Prozument K, Choi MY, Vilesov AF. Spectrum and infrared intensities of OH-stretching bands of water dimers. J Chem Phys 2010; 132:014304. [DOI: 10.1063/1.3276459] [Citation(s) in RCA: 101] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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22
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Michielsen B, Dom JJJ, Veken BJVD, Hesse S, Xue Z, Suhm MA, Herrebout WA. The complexes of halothane with benzene: the temperature dependent direction of the complexation shift of the aliphatic C–H stretching. Phys Chem Chem Phys 2010; 12:14034-44. [DOI: 10.1039/c0cp00771d] [Citation(s) in RCA: 56] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
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23
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Plath KL, Takahashi K, Skodje RT, Vaida V. Fundamental and overtone vibrational spectra of gas-phase pyruvic acid. J Phys Chem A 2009; 113:7294-303. [PMID: 19260671 DOI: 10.1021/jp810687t] [Citation(s) in RCA: 59] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Pyruvic acid (CH(3)COCOOH) is an important keto acid present in the atmosphere. In this study, the vibrational spectroscopy of gas-phase pyruvic acid has been investigated with special emphasis on the overtone transitions of the OH-stretch, with Delta v(OH) = 2, 4, 5. Assignments were made to fundamental and combination bands in the mid-IR. The two lowest energy rotational conformers of pyruvic acid are clearly observed in the spectrum. The lowest energy conformer possesses an intramolecular hydrogen bond, while the next lowest rotational conformer does not. This difference is clearly seen in the spectra of the OH vibrational overtone transitions, and it is reflected in the anharmonicities of the OH-stretching modes for each conformer. The spectra of the OH-stretching vibration for both conformers were investigated to establish the effect of the hydrogen bond on frequency, intensity, and line width.
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Affiliation(s)
- Kathryn L Plath
- Department of Chemistry and Biochemistry, University of Colorado, Campus Box 215, Boulder, Colorado 80309, USA
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