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Suda K, Yokogawa D. Vibrational Self-Consistent Field (VSCF) and Post-VSCF Method Calculations Combined with the Reference Interaction Site Model Self-Consistent Field Method Coupled with the Constrained Spatial Electron Density Distribution: Applications to NaHCOO in Aqueous Phase. J Chem Theory Comput 2024; 20:4885-4892. [PMID: 38815984 DOI: 10.1021/acs.jctc.4c00360] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/01/2024]
Abstract
Investigating vibrational behavior in solution is crucial for understanding molecular dynamics within a solvent environment. Notably, the analysis of Raman spectra for molecules in solution is important owing to its ability to unveil intricate solute-solvent interactions. Previous studies have effectively employed frequency calculations utilizing the reference interaction site model self-consistent field method in conjunction with constrained spatial electron density distribution (RISM-SCF-cSED) to understand molecular vibrations in solution, primarily focusing on fundamental vibrational modes. However, the oversight of overtones and combination tones in these studies prompted us to combine the vibrational self-consistent field (VSCF) and vibrational second-order Mo̷ller-Plesset perturbation (VMP2) methods with RISM-SCF-cSED to address these aspects theoretically. Illustrating the efficacy of this integrated approach, we computed the Raman spectra of sodium formate (NaHCOO) in water, revealing the necessity of accounting for molecular anharmonicity in solution vibrational analysis. Our findings underscore the potency of VSCF and VMP2 in conjunction with RISM-SCF-cSED as a robust theoretical framework for such calculations.
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Affiliation(s)
- Kayo Suda
- Graduate School of Arts and Sciences, The University of Tokyo, 3-8-1 Komaba, Meguro-ku, Tokyo 153-8902, Japan
| | - Daisuke Yokogawa
- Graduate School of Arts and Sciences, The University of Tokyo, 3-8-1 Komaba, Meguro-ku, Tokyo 153-8902, Japan
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2
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Dangombe MS, Oladepo SA. Investigation of solute-solvent interactions of 4'-alkyl-4-cyanobiphenyl liquid crystals using Raman spectroscopy. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2024; 312:124067. [PMID: 38422937 DOI: 10.1016/j.saa.2024.124067] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2023] [Revised: 02/06/2024] [Accepted: 02/19/2024] [Indexed: 03/02/2024]
Abstract
Liquid crystal materials possess hybrid liquid and solid-like properties with high response to stimuli. The 4'-alkyl-4-cyanobiphenyls (nCB) are an important class of liquid crystals that are widely used for various applications. In this study, six alkylcyanobiphenyl liquid crystal samples (5CB to 10CB) were examined using Raman spectroscopy in a total of twelve solvents of various polarities. The distinctive bands contributed by the LC sample are from C≡N stretch, C-C aromatic ring breathing, C-C biphenyl linking stretch, and C-H in-plane deformation. These modes are found to be responsive to different solvent environments by shifting positions. For instance, the cyano stretching mode of 5CB is blue-shifted from 2229 cm-1 for the pure sample to 2233 cm-1 when measured in hexane due to the repulsive interaction between the mode and the solvent bath. On the other hand, this mode undergoes a red-shift to 2220 cm-1 in methanol due to hydrogen bond interaction between the mode and solvent molecules. Overall, the shift in the position of the vibrational modes of nCB molecules was correlated with solvent properties such as acceptor number, donor number, and Kamlet-Taft dipolarity constants, which are a measure of solvent polarity. In samples with longer alkyl chains (8CB, 9CB, and 10CB), the wavenumber of the stretching modes was generally shifted to around the same position in all the solvents. Such observations are related to the folding back effect and enhanced dimerization constant with an increase in the chain length.
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Affiliation(s)
- Musa S Dangombe
- Department of Chemistry, King Fahd University of Petroleum and Minerals, Dhahran, Saudi Arabia; Interdisciplinary Research Center for Advanced Materials (IRC-AM), King Fahd University of Petroleum and Minerals, Dhahran, Saudi Arabia
| | - Sulayman A Oladepo
- Department of Chemistry, King Fahd University of Petroleum and Minerals, Dhahran, Saudi Arabia; Interdisciplinary Research Center for Advanced Materials (IRC-AM), King Fahd University of Petroleum and Minerals, Dhahran, Saudi Arabia.
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Suda K, Yokogawa D. Theoretical Study of Raman Intensities of p-Nitroaniline in Different Solvent Conditions by Using a Reference Interaction Site Model Self-Consistent Field Explicitly Including Constrained Spatial Electron Density Distribution. J Phys Chem B 2023; 127:11023-11030. [PMID: 38100491 DOI: 10.1021/acs.jpcb.3c04983] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2023]
Abstract
Raman spectroscopy is one of the most powerful tools to understand and characterize the states and structures of systems in several environments. To obtain highly accurate changes in Raman intensities of systems in solution, theoretical treatment, which can deal with not only the states and structures of systems but also the environment around molecules, proves to be significant. Hence, in this study, we developed the calculation of changes in Raman intensities of systems in different solvent conditions by using the reference interaction site model self-consistent field study explicitly including constrained spatial electron density distribution; this model is designed based on elements from both quantum mechanics and statistical mechanics. We showed that our calculation method could reproduce the changes in Raman intensities of p-nitroaniline (pNA) under different solvent conditions, including supercritical water, which has been observed in previous experimental studies. Based on the analysis of the calculation results, we observed that the ratio of the Raman intensity change of pNA in different solvent conditions is strongly correlated with the charge-transfer character of pNA.
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Affiliation(s)
- Kayo Suda
- Graduate School of Arts and Sciences, The University of Tokyo, 3-8-1 Komaba, Meguro-ku, Tokyo 153-8902, Japan
| | - Daisuke Yokogawa
- Graduate School of Arts and Sciences, The University of Tokyo, 3-8-1 Komaba, Meguro-ku, Tokyo 153-8902, Japan
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Suda K, Yokogawa D. Theoretical Understanding of the Nonlinear Raman Shift of C≡N Stretching Vibration of p-Aminobenzonitrile in Supercritical Water. J Phys Chem B 2023; 127:3010-3015. [PMID: 36961951 DOI: 10.1021/acs.jpcb.2c09034] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/26/2023]
Abstract
Subcritical and supercritical fluids (SCF) have attracted significant attention in the past few decades because of their unique properties. In a previous study, a nonlinear Raman shift of the C≡N stretching vibration of p-aminobenzonitrile (p-ABN) with respect to the supercritical water (SCW) density was observed [K. Osawa et al., J. Phys. Chem. A 2009, 113, 3143-3154]. Although a plausible mechanism of the nonlinear Raman shift was proposed in the study, the discussion at the atomistic level was inadequate. To elucidate the nonlinear Raman shift mechanism of the C≡N stretching vibration of p-ABN in SCW from a theoretical viewpoint, we employed RISM-SCF-cSED, which is the hybrid method between quantum mechanics and statistical mechanics. We discovered that the hydrogen-bonding effect is dominant at low- and middle-density regions, while the packing effect is dominant at the high-density region. The balances of these effects determine the Raman shift of p-ABN in SCF.
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Affiliation(s)
- Kayo Suda
- Graduate School of Arts and Sciences, The University of Tokyo, 3-8-1 Komaba, Meguro-ku, Tokyo 153-8902, Japan
| | - Daisuke Yokogawa
- Graduate School of Arts and Sciences, The University of Tokyo, 3-8-1 Komaba, Meguro-ku, Tokyo 153-8902, Japan
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Fujii K, Aramaki M, Kimura Y. Excited-State Proton Transfer of 5,8-Dicyano-2-naphthol in High-Temperature and High-Pressure Methanol: Effect of Solvent Polarity and Hydrogen Bonding Ability. J Phys Chem B 2018; 122:12363-12374. [DOI: 10.1021/acs.jpcb.8b09235] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Kaori Fujii
- Department of Applied Chemistry, Graduate School of Science and Engineering, Doshisha University, Kyotanabe, Kyoto 610-0321, Japan
| | - Megumi Aramaki
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, Kyotanabe, Kyoto 610-0321, Japan
| | - Yoshifumi Kimura
- Department of Applied Chemistry, Graduate School of Science and Engineering, Doshisha University, Kyotanabe, Kyoto 610-0321, Japan
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, Kyotanabe, Kyoto 610-0321, Japan
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Yasaka Y, Saito Y, Kimura Y. Role of Hydrogen-Bond Interactions in CO 2 Capture by Wet Phosphonium Formate Ionic Liquid: A Raman Spectroscopic Study. Chemphyschem 2018; 19:1674-1682. [PMID: 29688588 DOI: 10.1002/cphc.201701324] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2017] [Indexed: 11/12/2022]
Abstract
The mechanism of CO2 absorption by a formate ionic liquid, [P4444 ]HCOO, was studied by Raman spectroscopy. The band area for the symmetric CO2 stretching of the formate anion linearly decreases with the CO2 loading. From the slope of the decrease, 1 : 1 stoichiometry is proven between CO2 and the formate anion. The result favors the mechanism we proposed in a preceding work [J. Chem. Eng. Data 61, 837 (2016)]: HCOO- +CO2 +H2 O→HCOOH+HCO3- →[HCOOH…HCO3- ]. Further support for the mechanism is obtained by the observation of antisymmetric vibration of CO for the proposed hydrogen-bonded complex between HCOOH and HCO3- . The bands appeared as a doublet (1677 and 1730 cm-1 ) as this complex has two carbonyl groups. Based on DFT calculations, the [HCOOH…HCO3- ] complex is supposed to be the most abundant form of chemisorbed CO2 .
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Affiliation(s)
- Yoshiro Yasaka
- Department of Molecular Chemistry and Biochemistry, Faculty of Science and Engineering, Doshisha University, Kyotanabe, Kyoto, 610-0321, Japan.,Present Address: Faculty of Natural System, Institute of Science and Engineering, Kanazawa University, Kanazawa, Ishikawa, 920-1192, Japan
| | - Yuma Saito
- Department of Applied Chemistry, Graduate School of Science and Engineering, Doshisha University, Kyotanabe, Kyoto, 610-0321, Japan
| | - Yoshifumi Kimura
- Department of Applied Chemistry, Graduate School of Science and Engineering, Doshisha University, Kyotanabe, Kyoto, 610-0321, Japan
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Kimura Y, Kida Y, Matsushita Y, Yasaka Y, Ueno M, Takahashi K. Universality of Viscosity Dependence of Translational Diffusion Coefficients of Carbon Monoxide, Diphenylacetylene, and Diphenylcyclopropenone in Ionic Liquids under Various Conditions. J Phys Chem B 2015; 119:8096-103. [DOI: 10.1021/acs.jpcb.5b02898] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
| | | | - Y. Matsushita
- Institute
of Science and Engineering, Kanazawa University, Kakuma-machi, Kanazawa, 920-1192, Japan
| | | | | | - K. Takahashi
- Institute
of Science and Engineering, Kanazawa University, Kakuma-machi, Kanazawa, 920-1192, Japan
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Schmies M, Miyazaki M, Fujii M, Dopfer O. Microhydrated aromatic cluster cations: Binding motifs of 4-aminobenzonitrile-(H2O)n cluster cations with n ≤ 4. J Chem Phys 2014; 141:214301. [DOI: 10.1063/1.4901893] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Matthias Schmies
- Institut für Optik und Atomare Physik, Technische Universität Berlin, Hardenbergstr. 36, 10623 Berlin, Germany
| | - Mitsuhiko Miyazaki
- Chemical Resources Laboratory, Tokyo Institute of Technology, Yokohama 226-8503, Japan
| | - Masaaki Fujii
- Chemical Resources Laboratory, Tokyo Institute of Technology, Yokohama 226-8503, Japan
| | - Otto Dopfer
- Institut für Optik und Atomare Physik, Technische Universität Berlin, Hardenbergstr. 36, 10623 Berlin, Germany
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11
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Sato H. A modern solvation theory: quantum chemistry and statistical chemistry. Phys Chem Chem Phys 2013; 15:7450-65. [DOI: 10.1039/c3cp50247c] [Citation(s) in RCA: 52] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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12
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Osawa K, Terazima M, Kimura Y. Electron Transfer Reaction Dynamics of p-Nitroaniline in Water from Liquid to Supercritical Conditions. J Phys Chem B 2012; 116:11508-16. [DOI: 10.1021/jp305970r] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Koji Osawa
- Department of Chemistry, Graduate School
of Science, Kyoto University, Kyoto 606-8502,
Japan
| | - Masahide Terazima
- Department of Chemistry, Graduate School
of Science, Kyoto University, Kyoto 606-8502,
Japan
| | - Yoshifumi Kimura
- Department of Chemistry, Graduate School
of Science, Kyoto University, Kyoto 606-8502,
Japan
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13
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Kobayashi I, Terazima M, Kimura Y. Study of the excited-state proton-transfer reaction of 5-cyano-2-naphthol in sub- and supercritical water. J Phys Chem B 2012; 116:1043-52. [PMID: 22201510 DOI: 10.1021/jp2097422] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
The excited-state proton-transfer (ESPT) reaction of 5-cyano-2-naphthol (5CN2) has been investigated in sub- and supercritical water using time-resolved fluorescence measurements. Under ambient conditions, a very fast decay of the fluorescence from the excited state of normal 5CN2 (ROH*) and a simultaneous increase of the fluorescence from the excited state of the anion species (RO(-)*) were observed, as reported previously. The very high ESPT rate was evaluated as 0.12 ps(-1). With increasing temperature at a constant pressure of 39.0 MPa, the proton transfer became slow. At 615 K and 39.0 MPa, another fluorescence from a new unknown chemical species appeared, which was assigned to the contact ion pair (CIP) of RO(-)* and the hydronium ion. With decreasing pressure at 664 K, the fluorescence from RO(-)* disappeared, and the fluorescence from ROH* and CIP was observed. At the very low density of supercritical water, only the fluorescence decay of ROH* was detected. The reaction dynamics was analyzed with the help of singular value decomposition and spectral decomposition using model functions. The ESPT rate was correlated with the solvent dielectric constant and/or the hydrogen-bonding ability.
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Affiliation(s)
- I Kobayashi
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan
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14
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Kobayashi A, Osawa K, Terazima M, Kimura Y. Solute–solvent hydrogen-bonding in room temperature ionic liquids studied by Raman spectroscopy. Phys Chem Chem Phys 2012; 14:13676-83. [DOI: 10.1039/c2cp41567d] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
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15
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Kajiya D, Saitow KI. Significant substitution effects in dipolar and non-dipolar supercritical fluids. J Chem Phys 2011; 134:234508. [DOI: 10.1063/1.3602159] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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16
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Kajiya D, Saitow KI. Site-Selective Solvation in Supercritical CO2Observed by Raman Spectroscopy: Phenyl Group Leads to Greater Attractive Energy than Chloro Group. J Phys Chem B 2010; 114:16832-7. [DOI: 10.1021/jp107820j] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Daisuke Kajiya
- Natural Science Center for Basic Research and Development (N-BARD) and Department of Chemistry, Graduate School of Science, Hiroshima University, 1-3-1 Kagamiyama, Higashi-hiroshima, Hiroshima 739-8526, Japan
| | - Ken-ichi Saitow
- Natural Science Center for Basic Research and Development (N-BARD) and Department of Chemistry, Graduate School of Science, Hiroshima University, 1-3-1 Kagamiyama, Higashi-hiroshima, Hiroshima 739-8526, Japan
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17
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Kajiya D, Saitow KI. Solute−Solvent Intermolecular Interactions in Supercritical Xe, SF6, CO2, and CHF3 Investigated by Raman Spectroscopy: Greatest Attractive Energy Observed in Supercritical Xe. J Phys Chem B 2010; 114:8659-66. [DOI: 10.1021/jp101217s] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Daisuke Kajiya
- Natural Science Center for Basic Research and Development (N-BARD), Hiroshima University, 1-3-1 Kagamiyama, Higashi-Hiroshima, Hiroshima 739-8526, Japan, and Department of Chemistry, Graduate School of Science, Hiroshima University, 1-3-1 Kagamiyama, Higashi-Hiroshima, Hiroshima 739-8526, Japan
| | - Ken-ichi Saitow
- Natural Science Center for Basic Research and Development (N-BARD), Hiroshima University, 1-3-1 Kagamiyama, Higashi-Hiroshima, Hiroshima 739-8526, Japan, and Department of Chemistry, Graduate School of Science, Hiroshima University, 1-3-1 Kagamiyama, Higashi-Hiroshima, Hiroshima 739-8526, Japan
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18
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Yokogawa D, Sato H, Sakaki S, Kimura Y. Aqueous Solvation of p-Aminobenzonitrile in the Excited States: A Molecular Level Theory on Density Dependence. J Phys Chem B 2009; 114:910-4. [DOI: 10.1021/jp910362z] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Affiliation(s)
- Daisuke Yokogawa
- Department of Molecular Engineering, Graduate School of Engineering, Kyoto University, Kyoto 615-8510, Japan, and Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8501, Japan
| | - Hirofumi Sato
- Department of Molecular Engineering, Graduate School of Engineering, Kyoto University, Kyoto 615-8510, Japan, and Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8501, Japan
| | - Shigeyoshi Sakaki
- Department of Molecular Engineering, Graduate School of Engineering, Kyoto University, Kyoto 615-8510, Japan, and Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8501, Japan
| | - Yoshifumi Kimura
- Department of Molecular Engineering, Graduate School of Engineering, Kyoto University, Kyoto 615-8510, Japan, and Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto 606-8501, Japan
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