1
|
Integrative measurement analysis via machine learning descriptor selection for investigating physical properties of biopolymers in hairs. Sci Rep 2021; 11:24359. [PMID: 34934112 PMCID: PMC8692616 DOI: 10.1038/s41598-021-03793-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2021] [Accepted: 12/10/2021] [Indexed: 11/17/2022] Open
Abstract
Integrative measurement analysis of complex subjects, such as polymers is a major challenge to obtain comprehensive understanding of the properties. In this study, we describe analytical strategies to extract and selectively associate compositional information measured by multiple analytical techniques, aiming to reveal their relationships with physical properties of biopolymers derived from hair. Hair samples were analyzed by multiple techniques, including solid-state nuclear magnetic resonance (NMR), time-domain NMR, Fourier transform infrared spectroscopy, and thermogravimetric and differential thermal analysis. The measured data were processed by different processing techniques, such as spectral differentiation and deconvolution, and then converted into a variety of “measurement descriptors” with different compositional information. The descriptors were associated with the mechanical properties of hair by constructing prediction models using machine learning algorithms. Herein, the stepwise model refinement via selection of adopted descriptors based on importance evaluation identified the most contributive descriptors, which provided an integrative interpretation about the compositional factors, such as α-helix keratins in cortex; and bounded water and thermal resistant components in cuticle. These results demonstrated the efficacy of the present strategy to generate and select descriptors from manifold measured data for investigating the nature of sophisticated subjects, such as hair.
Collapse
|
2
|
Khumalo M, Sithole B, Tesfaye T. Valorisation of waste chicken feathers: Optimisation of keratin extraction from waste chicken feathers by sodium bisulphite, sodium dodecyl sulphate and urea. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2020; 262:110329. [PMID: 32250808 DOI: 10.1016/j.jenvman.2020.110329] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2019] [Revised: 02/12/2020] [Accepted: 02/22/2020] [Indexed: 06/11/2023]
Abstract
Extraction of keratin from keratinous waste materials, such as chicken feathers, has been identified as the favourable approach in beneficiation of this biomass. The chemical extractions of keratin by reducing agents are usually preferred because the process is much faster than its counterpart, oxidation extraction. One such reduction extraction is the use of a mixture of sodium bisulphite, sodium dodecyl sulphate and urea. There are at least five factors that may affect the keratin extraction process and its final properties when using this extraction. Even though this extraction method is often used, the effects of its independent variables have not been studied; as a result, the effects of independent variables cannot be fully linked to the extraction process and final keratin properties. Therefore, this study aimed to optimise the extraction of keratin from waste chicken feathers using sodium bisulphite, sodium dodecyl sulphate and urea. The optimisation was statistically performed using Response Surface Methodology (RSM) linked with Box-Behnken Design. After screening the independent variable using one factor at a time method, the concentration of sodium bisulphite, concentration of sodium dodecyl sulphate, reaction temperature and reaction time were chosen for the study. Twenty-nine experiments were statistically designed and executed, and their results were used to analyse the effects of all the independent variables in order to optimise the extraction process. The reaction temperature was found to be the most significant factor, while the concentration of sodium dodecyl sulphate was the most insignificant factor of this extraction process. Independent variables significance order was reaction temperature > reaction time > concentration of NaHSO3 > concentration of NaC12H25SO4. The designed reduced cubic model was significant and was used to predict the protein yield from the keratin extraction using sodium bisulphite.
Collapse
Affiliation(s)
- Mduduzi Khumalo
- University of KwaZulu-Natal, Discipline of Chemical Engineering, Durban, South Africa; Biorefinery Industry Development Facility, Chemical Cluster, Council for Scientific and Industrial Research, Durban, South Africa.
| | - Bruce Sithole
- University of KwaZulu-Natal, Discipline of Chemical Engineering, Durban, South Africa; Biorefinery Industry Development Facility, Chemical Cluster, Council for Scientific and Industrial Research, Durban, South Africa
| | - Tamrat Tesfaye
- University of KwaZulu-Natal, Discipline of Chemical Engineering, Durban, South Africa; Biorefinery Industry Development Facility, Chemical Cluster, Council for Scientific and Industrial Research, Durban, South Africa; Ethiopian Institute of Textile and Fashion Technology, Bahir Dar University, Bahir Dar, Ethiopia
| |
Collapse
|
3
|
de Paris Júnior O, Scapini T, Camargo AF, Venturin B, Dalastra C, Kubeneck S, Czapela FF, Preczeski KP, Stefanski FS, Korf EP, Valério A, Di Luccio M, Mossi AJ, Fongaro G, Treichel H. Removal of chromium from wastewater by swine hair residues applied as a putative biofilter. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2019; 26:33014-33022. [PMID: 31512133 DOI: 10.1007/s11356-019-06313-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/07/2019] [Accepted: 08/26/2019] [Indexed: 06/10/2023]
Abstract
Swine production chain generates residues with potential application in environmental processes. This study aimed at the use of swine hair as a potential biofilter for hexavalent chromium (Cr(VI)) removal from wastewater of tannery industry. The hair was pretreated using H2O2 in alkaline medium, and statistical analysis was carried out to evaluate the hair degradation, as well the Cr(VI) removal by the potential pretreated biofilter. The results showed 99% of Cr(VI) removal in 105 min of treatment in large pH range (1-10). Treated and untreated effluents were submitted to cytotoxicity study using vegetable and animal cells, demonstrating a significant reduction on toxicity to both cells. Therefore, swine hair demonstrated to be a promising residue for heavy metal removal on the perspective of an environmentally friendly technique.
Collapse
Affiliation(s)
| | - Thamarys Scapini
- Laboratory of Microbiology and Bioprocess, University of Fronteira Sul, Erechim, Brazil
| | - Aline Frumi Camargo
- Laboratory of Microbiology and Bioprocess, University of Fronteira Sul, Erechim, Brazil
| | - Bruno Venturin
- Laboratory of Microbiology and Bioprocess, University of Fronteira Sul, Erechim, Brazil
| | - Caroline Dalastra
- Laboratory of Microbiology and Bioprocess, University of Fronteira Sul, Erechim, Brazil
| | - Simone Kubeneck
- Laboratory of Microbiology and Bioprocess, University of Fronteira Sul, Erechim, Brazil
| | | | - Karina P Preczeski
- Laboratory of Microbiology and Bioprocess, University of Fronteira Sul, Erechim, Brazil
| | | | - Eduardo Pavan Korf
- Laboratory of Effluents and Waste, University of Fronteira Sul, Erechim, Brazil
| | - Alexsandra Valério
- Department of Chemical and Food Engineering, Federal University of Santa Catarina, Florianópolis, SC, Brazil
| | - Marco Di Luccio
- Department of Chemical and Food Engineering, Federal University of Santa Catarina, Florianópolis, SC, Brazil
| | | | - Gislaine Fongaro
- Laboratory of Microbiology and Bioprocess, University of Fronteira Sul, Erechim, Brazil
- Laboratory of Virology, Federal University of Santa Catarina, Florianópolis, SC, Brazil
| | - Helen Treichel
- Laboratory of Microbiology and Bioprocess, University of Fronteira Sul, Erechim, Brazil.
| |
Collapse
|
4
|
Dissolution and regeneration of wool keratin in the deep eutectic solvent of choline chloride-urea. Int J Biol Macromol 2018; 119:423-430. [DOI: 10.1016/j.ijbiomac.2018.07.161] [Citation(s) in RCA: 40] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2018] [Revised: 07/12/2018] [Accepted: 07/25/2018] [Indexed: 12/15/2022]
|
5
|
Kadir M, Wang X, Zhu B, Liu J, Harland D, Popescu C. The structure of the "amorphous" matrix of keratins. J Struct Biol 2017; 198:116-123. [PMID: 28390956 DOI: 10.1016/j.jsb.2017.04.001] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2016] [Revised: 03/31/2017] [Accepted: 04/01/2017] [Indexed: 10/19/2022]
Abstract
Various keratin fibers, particularly human hairs, were investigated by transmission electron microscopy, TEM, solid-state 1H NMR and Transient Electro-Thermal Technique, TET. The results converge to suggest that the matrix of keratin fiber cortex, far from being amorphous, has a well-defined nano-scale grainy structure, the size of these grains being around 2-4nm. The size of the grains appears to strongly depend on the chemical treatment of the fiber, on the temperature and on the relative humidity of the environment, as well as on the physiological factors at the level of fiber production in follicle. By suggesting an organization at the nano-scale of the protein chains in these grains, likely to be Keratin Associated Proteins, the results challenge the view of matrix as a homogeneous glassy material. Moreover, they indicate the potential of further investigating the purpose of this structure that appears to reflect not only chemical treatments of keratins but also biological processes at the level of the follicle.
Collapse
Affiliation(s)
- Murat Kadir
- Lubrizol Advanced Materials, Inc., 9911 Brecksville Road, Brecksville, OH 44141, USA.
| | - Xinwei Wang
- Department of Mechanical Engineering, 2025 Black Engineering Building, Iowa State University, Ames, IA 50011, USA.
| | - Bowen Zhu
- Department of Mechanical Engineering, 2025 Black Engineering Building, Iowa State University, Ames, IA 50011, USA
| | - Jing Liu
- Department of Mechanical Engineering, 2025 Black Engineering Building, Iowa State University, Ames, IA 50011, USA
| | - Duane Harland
- AgResearch Limited, Lincoln Research Centre, Private Bag 4749, Christchurch 8140, New Zealand.
| | - Crisan Popescu
- KAO Germany GmbH, Pfungstädterstr. 98-100, D-64297 Darmstadt, Germany.
| |
Collapse
|
6
|
Brzózka P, Kolodziejski W. Sex-related chemical differences in keratin from fingernail plates: a solid-state carbon-13 NMR study. RSC Adv 2017. [DOI: 10.1039/c7ra03487c] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
The carbon-13 solid-state NMR reveals chemical differences in fingernail keratin between young, healthy males and females.
Collapse
Affiliation(s)
- Paulina Brzózka
- Department of Inorganic and Analytical Chemistry
- Faculty of Pharmacy with the Laboratory Medicine Division
- Medical University of Warsaw
- Warsaw
- Poland
| | - Waclaw Kolodziejski
- Department of Inorganic and Analytical Chemistry
- Faculty of Pharmacy with the Laboratory Medicine Division
- Medical University of Warsaw
- Warsaw
- Poland
| |
Collapse
|
7
|
Wong WCV, Narkevicius A, Chow WY, Reid DG, Rajan R, Brooks RA, Green M, Duer MJ. Solid state NMR of isotope labelled murine fur: a powerful tool to study atomic level keratin structure and treatment effects. JOURNAL OF BIOMOLECULAR NMR 2016; 66:93-98. [PMID: 27699524 PMCID: PMC5095156 DOI: 10.1007/s10858-016-0056-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/11/2016] [Accepted: 08/23/2016] [Indexed: 06/06/2023]
Abstract
We have prepared mouse fur extensively 13C,15N-labelled in all amino acid types enabling application of 2D solid state NMR techniques which establish covalent and spatial proximities within, and in favorable cases between, residues. 13C double quantum-single quantum correlation and proton driven spin diffusion techniques are particularly useful for resolving certain amino acid types. Unlike 1D experiments on isotopically normal material, the 2D methods allow the chemical shifts of entire spin systems of numerous residue types to be determined, particularly those with one or more distinctively shifted atoms such as Gly, Ser, Thr, Tyr, Phe, Val, Leu, Ile and Pro. Also the partial resolution of the amide signals into two signal envelopes comprising of α-helical, and β-sheet/random coil components, enables resolution of otherwise overlapped α-carbon signals into two distinct cross peak families corresponding to these respective secondary structural regions. The increase in resolution conferred by extensive labelling offers new opportunities to study the chemical fate and structural environments of specific atom and amino acid types under the influence of commercial processes, and therapeutic or cosmetic treatments.
Collapse
Affiliation(s)
| | - Aurimas Narkevicius
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW, UK
| | - Wing Ying Chow
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW, UK
| | - David G Reid
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW, UK
| | - Rakesh Rajan
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW, UK
| | - Roger A Brooks
- Department of Trauma and Orthopaedic Surgery, Addenbrooke's Hospital, University of Cambridge, Cambridge, CB2 0QQ, UK
| | - Maggie Green
- Central Biomedical Resources, School of Clinical Medicine, University of Cambridge, West Forvie Building, Forvie Site, Robinson Way, Cambridge, CB2 0SZ, UK
| | - Melinda J Duer
- Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW, UK.
| |
Collapse
|
8
|
Truxal AE, Slack CC, Gomes MD, Vassiliou CC, Wemmer DE, Pines A. Nondisruptive Dissolution of Hyperpolarized
129
Xe into Viscous Aqueous and Organic Liquid Crystalline Environments. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201511539] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Ashley E. Truxal
- Department of Chemistry University of California Berkeley CA 94720-1460 USA
- Material Science Division Lawrence Berkeley National Laboratory Berkeley CA 94720-1460 USA
| | - Clancy C. Slack
- Department of Chemistry University of California Berkeley CA 94720-1460 USA
- Material Science Division Lawrence Berkeley National Laboratory Berkeley CA 94720-1460 USA
| | - Muller D. Gomes
- Department of Chemistry University of California Berkeley CA 94720-1460 USA
- Material Science Division Lawrence Berkeley National Laboratory Berkeley CA 94720-1460 USA
| | - Christophoros C. Vassiliou
- Department of Chemistry University of California Berkeley CA 94720-1460 USA
- Material Science Division Lawrence Berkeley National Laboratory Berkeley CA 94720-1460 USA
| | - David E. Wemmer
- Department of Chemistry University of California Berkeley CA 94720-1460 USA
- Molecular Biophysics and Integrated Bioimaging Division Lawrence Berkeley National Laboratory Berkeley CA 94720-1460 USA
| | - Alexander Pines
- Department of Chemistry University of California Berkeley CA 94720-1460 USA
- Material Science Division Lawrence Berkeley National Laboratory Berkeley CA 94720-1460 USA
| |
Collapse
|
9
|
Truxal AE, Slack CC, Gomes MD, Vassiliou CC, Wemmer DE, Pines A. Nondisruptive Dissolution of Hyperpolarized (129)Xe into Viscous Aqueous and Organic Liquid Crystalline Environments. Angew Chem Int Ed Engl 2016; 55:4666-70. [PMID: 26954536 DOI: 10.1002/anie.201511539] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2015] [Revised: 01/26/2016] [Indexed: 01/14/2023]
Abstract
Studies of hyperpolarized xenon-129 (hp-(129)Xe) in media such as liquid crystals and cell suspensions are in demand for applications ranging from biomedical imaging to materials engineering but have been hindered by the inability to bubble Xe through the desired media as a result of viscosity or perturbations caused by bubbles. Herein a device is reported that can be reliably used to dissolve hp-(129)Xe into viscous aqueous and organic samples without bubbling. This method is robust, requires small sample volumes (<60 μL), is compatible with existing NMR hardware, and is made from readily available materials. Experiments show that Xe can be introduced into viscous and aligned media without disrupting molecular order. We detected dissolved xenon in an aqueous liquid crystal that is disrupted by the shear forces of bubbling, and we observed liquid-crystal phase transitions in (MBBA). This tool allows an entirely new class of samples to be investigated by hyperpolarized-gas NMR spectroscopy.
Collapse
Affiliation(s)
- Ashley E Truxal
- Department of Chemistry, University of California, Berkeley, CA, 94720-1460, USA.,Material Science Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720-1460, USA
| | - Clancy C Slack
- Department of Chemistry, University of California, Berkeley, CA, 94720-1460, USA.,Material Science Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720-1460, USA
| | - Muller D Gomes
- Department of Chemistry, University of California, Berkeley, CA, 94720-1460, USA.,Material Science Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720-1460, USA
| | - Christophoros C Vassiliou
- Department of Chemistry, University of California, Berkeley, CA, 94720-1460, USA.,Material Science Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720-1460, USA
| | - David E Wemmer
- Department of Chemistry, University of California, Berkeley, CA, 94720-1460, USA.,Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720-1460, USA
| | - Alexander Pines
- Department of Chemistry, University of California, Berkeley, CA, 94720-1460, USA. .,Material Science Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720-1460, USA.
| |
Collapse
|
10
|
Zhang Q, Liebeck BM, Yan K, Demco DE, Körner A, Popescu C. Alpha-Helix Self-Assembly of Oligopeptides Originated From Beta-Sheet Keratin. MACROMOL CHEM PHYS 2012. [DOI: 10.1002/macp.201200446] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
|
11
|
Litvinov VM, Xu J, Melian C, Demco DE, Möller M, Simmelink J. Morphology, Chain Dynamics, and Domain Sizes in Highly Drawn Gel-Spun Ultrahigh Molecular Weight Polyethylene Fibers at the Final Stages of Drawing by SAXS, WAXS, and 1H Solid-State NMR. Macromolecules 2011. [DOI: 10.1021/ma201888f] [Citation(s) in RCA: 69] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- V. M. Litvinov
- DSM Resolve, P.O. Box 18, 6160 MD Geleen, The Netherlands
| | - Jianjun Xu
- DSM Resolve, P.O. Box 18, 6160 MD Geleen, The Netherlands
| | - C. Melian
- DSM Resolve, P.O. Box 18, 6160 MD Geleen, The Netherlands
| | - D. E. Demco
- DWI an der RWTH-Universität Aachen e.V., Pauwelsstrasse 8, D-52074 Aachen, Germany
| | - M. Möller
- DWI an der RWTH-Universität Aachen e.V., Pauwelsstrasse 8, D-52074 Aachen, Germany
| | - J. Simmelink
- DSM Dyneema, Mauritslaan 49, 6129 EL Urmond, The Netherlands
| |
Collapse
|
12
|
Utiu L, Demco DE, Fechete R, Möller M, Popescu C. Morphology and molecular dynamics of hard α-keratin based micro-tubes by 1H and 13C solid-state NMR. Chem Phys Lett 2011. [DOI: 10.1016/j.cplett.2011.10.036] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/15/2022]
|
13
|
Melian C, Demco DE, Istrate M, Balaceanu A, Moldovan D, Fechete R, Popescu C, Möller M. Morphology and side-chain dynamics in hydrated hard α-keratin fibres by 1H solid-state NMR. Chem Phys Lett 2009. [DOI: 10.1016/j.cplett.2009.09.013] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
|