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G S, Devadiga D, B M S, T N A. Synthetic Strategies for 3,6-Substituted Carbazole-based Polymers and Their Opto-Electronic Applications-A Review. J Fluoresc 2024:10.1007/s10895-023-03535-2. [PMID: 38252218 DOI: 10.1007/s10895-023-03535-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2023] [Accepted: 11/28/2023] [Indexed: 01/23/2024]
Abstract
The use of conducting polymers in devices makes them desirable due to their allowance for the fabrication of flexible, lightweight, and potentially inexpensive devices. This review explores the synthetic strategies and characterizations of 3,6-substituted carbazole-based polymers, emphasizing the influence of these modifications on their electronic structure and absorption properties. Polymers containing carbazole substituents are widely studied due to their unique optical and electronic properties, high electron-donating ability, and photoconductivity. The structural adaptability of the carbazole with the 3,6-substitution makes it as an outstanding candidate for their integration into polymers and also possesses improved stability and triplet energy. The role of intramolecular charge transfer (ICT) was highlighted by donor-acceptor architectures with tailoring energy levels to extract their advantageous physicochemical characteristics and optimized performances. Collectively, this comprehensive review delves into the burgeoning field of 3,6-substituted carbazole-based polymers and their crucial role in advancing optoelectronic applications. By amalgamating materials design, synthetic strategies, and application-driven insights, the review serves as a valuable resource for researchers to understand the structure-property relationships and foster innovative solutions for next-generation opto-electronic applications.
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Affiliation(s)
- Srikanth G
- Centre for Nano and Material Sciences, Jain (Deemed-to-Be University), Jain Global Campus, Kanakapura, Bangalore, Karnataka, India, 562112
| | - Deepak Devadiga
- Centre for Nano and Material Sciences, Jain (Deemed-to-Be University), Jain Global Campus, Kanakapura, Bangalore, Karnataka, India, 562112
| | - Samrudhi B M
- Centre for Nano and Material Sciences, Jain (Deemed-to-Be University), Jain Global Campus, Kanakapura, Bangalore, Karnataka, India, 562112
| | - Ahipa T N
- Centre for Nano and Material Sciences, Jain (Deemed-to-Be University), Jain Global Campus, Kanakapura, Bangalore, Karnataka, India, 562112.
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2
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Sahin O, Wallis JD. Crystal structure of bis-(mesit-yl)(pyrrol-1-yl)borane. Acta Crystallogr E Crystallogr Commun 2023; 79:50-53. [PMID: 36628361 PMCID: PMC9815137 DOI: 10.1107/s2056989022011768] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2022] [Accepted: 12/08/2022] [Indexed: 12/24/2022]
Abstract
In the crystal structure of the title compound, C22H26BN, the B atom acts to reduce the delocalization of the nitro-gen lone-pair electron density into the pyrrole ring, so that the two N-C bonds increase in length to 1.4005 (14) and 1.3981 (14) Å. The N-B bond length is 1.4425 (15) Å, which is longer than a typical N-B bond because the nitro-gen lone pair is not fully available to participate in the bond.
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Affiliation(s)
- Onur Sahin
- School of Science and Technology, Nottingham Trent University, Clifton Lane, Nottingham, NG1 8NS, United Kingdom
| | - John D. Wallis
- School of Science and Technology, Nottingham Trent University, Clifton Lane, Nottingham, NG1 8NS, United Kingdom
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3
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Theoretical Perspectives on the Gas-Phase Oxidation Mechanism and Kinetics of Carbazole Initiated by OH Radical in the Atmosphere. ATMOSPHERE 2022. [DOI: 10.3390/atmos13071129] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
Carbazole is one of the typical heterocyclic aromatic compounds (NSO-HETs) observed in polluted urban atmosphere, which has become a serious environmental concern. The most important atmospheric loss process of carbazole is the reaction with OH radical. The present work investigated the mechanism of OH-initiated atmospheric oxidation degradation of carbazole by using density functional theory (DFT) calculations at the M06-2X/6-311++G(3df,2p)//M06-2X/6-311+G(d,p) level. The rate constants were determined by the Rice–Ramsperger–Kassel–Marcus (RRKM) theory. The lifetime of carbazole determined by OH was compared with other typical NSO-HETs. The theoretical results show that the degradation of carbazole initiated by OH radical includes four types of reactions: OH additions to “bend” C atoms, OH additions to “benzene ring” C atoms, H abstractions from C-H bonds and the H abstraction from N-H bond. The OH addition to C1 atom and the H abstraction from N-H bond are energetically favorable. The main oxidation products are hydroxycarbazole, dialdehyde, carbazolequinone, carbazole-ol, hydroxy-carbazole-one and hydroperoxyl-carbazole-one. The calculated overall rate constant of carbazole oxidation by OH radical is 6.52 × 10−12 cm3 molecule−1 s−1 and the atmospheric lifetime is 37.70 h under the condition of 298 K and 1 atm. The rate constant of carbazole determined by OH radical is similar with that of dibenzothiophene oxidation but lower than those of pyrrole, indole, dibenzofuran and fluorene. This work provides a theoretical investigation of the oxygenated mechanism of NSO-HETs in the atmosphere and should help to clarify their potential health risk for determining the reaction pathways and environmental influence of carbazole.
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Li X, Gao Y, Zuo C, Zheng S, Xu F, Sun Y, Zhang Q. The Gas-Phase Formation Mechanism of Dibenzofuran (DBF), Dibenzothiophene (DBT), and Carbazole (CA) from Benzofuran (BF), Benzothiophene (BT), and Indole (IN) with Cyclopentadienyl Radical. Int J Mol Sci 2019; 20:E5420. [PMID: 31683506 PMCID: PMC6861977 DOI: 10.3390/ijms20215420] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2019] [Revised: 10/28/2019] [Accepted: 10/28/2019] [Indexed: 11/16/2022] Open
Abstract
Benzofuran (BF), benzothiophene (BT), indole (IN), dibenzofuran (DBF), dibenzothiophene (DBT), and carbazole (CA) are typical heterocyclic aromatic compounds (NSO-HETs), which can coexist with polycyclic aromatic hydrocarbons (PAHs) in combustion and pyrolysis conditions. In this work, quantum chemical calculations were carried out to investigate the formation of DBF, DBT, and CA from the reactions of BF, BT, and IN with a cyclopentadienyl radical (CPDyl) by using the hybrid density functional theory (DFT) at the MPWB1K/6-311+G(3df,2p)//MPWB1K/6-31+G(d,p) level. The rate constants of crucial elementary steps were deduced over 600-1200 K, using canonical variational transition state theory with a small-curvature tunneling contribution (CVT/SCT). This paper showed that the production of DBF, DBT, and CA from the reactions of BF, BT, and IN with CPDyl involved six elementary steps: the addition reaction, ring closure, the first H shift, C-C cleavage, the second H shift, and elimination of CH3 or H. The cleavage of the C-C bond was regarded as the rate-determining step for each pathway due to the extremely high barrier. The 1-methyl substituted products were more easily formed than the 4-methyl substituted products. The main products were DBF and 1-methyl-DBF, DBT and 1-methyl-DBT, and CA and 1-methyl-CA for reactions of BF, BT, and IN with CPDyl, respectively. The ranking of DBF, DBT, and CA formation potential was as follows: DBT and methyl-DBT formation > DBF and methyl-DBF formation > CA, and methyl-CA formation. Comparison with the reaction of naphthalene with CPDyl indicated that the reactions of CPDyl attacking a benzene ring and a furan/thiophene/pyrrole ring could be inferred to be comparable under high temperature conditions.
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Affiliation(s)
- Xuan Li
- Environment Research Institute, Shandong University, Qingdao 266237, China.
| | - Yixiang Gao
- Environment Research Institute, Shandong University, Qingdao 266237, China.
| | - Chenpeng Zuo
- Environment Research Institute, Shandong University, Qingdao 266237, China.
- Shenzhen Research Institute, Shandong University, Shenzhen 518057, China.
| | - Siyuan Zheng
- Environment Research Institute, Shandong University, Qingdao 266237, China.
| | - Fei Xu
- Environment Research Institute, Shandong University, Qingdao 266237, China.
- Shenzhen Research Institute, Shandong University, Shenzhen 518057, China.
| | - Yanhui Sun
- College of Environment and Safety Engineering, Qingdao University of Science & Technology, Qingdao 266042, China.
| | - Qingzhu Zhang
- Environment Research Institute, Shandong University, Qingdao 266237, China.
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5
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Tavares APM, Truta LAANA, Moreira FTC, Carneiro LPT, Sales MGF. Self-powered and self-signalled autonomous electrochemical biosensor applied to cancinoembryonic antigen determination. Biosens Bioelectron 2019; 140:111320. [PMID: 31150987 DOI: 10.1016/j.bios.2019.111320] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2019] [Revised: 05/09/2019] [Accepted: 05/11/2019] [Indexed: 12/21/2022]
Abstract
This work describes a novel and disruptive electrochemical biosensing device that is self-powered by light and self-signalled by an optical readout. Electrical energy requirements are ensured by a photovoltaic cell that is a dye sensitized solar cell (DSSC), in which one of the electrodes is the biosensing unit. The readout converts electrical energy into colour by an electrochromic cell and signals the concentration dependent event. This device was designed to target a cancer biomarker, cancinoembryonic antigen (CEA). In brief, the sensing unit was assembled on a conductive glass substrate with a highly conductive poly(3,4-ethylenedioxythiophene) (PEDOT) layer, using a molecularly-imprinted polymer of polypyrrol (PPy) as biorecognition element. This sensing unit acted as the counter electrode (CE) of the DSSC, generating a hybrid device with a maximum power conversion efficiency of 3.45% for a photoanode area of 0.7 cm2. The hybrid DSSC/biosensor had an electrical output that was CEA concentration dependent from 100 ng/mL to 100 μg/mL, with a limit detection of 0.14 ng/mL in human urine samples. The electrochromic cell consisted of a PEDOT-based material and showed a colour gradient change for CEA concentrations, ranging from 0.1 ng/mL to 100 μg/mL. Overall, this self-powered and self-signalled set-up is equipment free and particularly suitable for point-of-care analysis (POC), being able to screen CEA in real samples and differentiating critical concentrations for establishing a diagnosis. It holds the potential to provide clinical relevant data anywhere, in a fully independent manner.
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Affiliation(s)
- Ana P M Tavares
- BioMark-CEB/ISEP, School of Engineering, Polytechnic Institute of Porto, Portugal
| | | | | | - Liliana P T Carneiro
- BioMark-CEB/ISEP, School of Engineering, Polytechnic Institute of Porto, Portugal
| | - M Goreti F Sales
- BioMark-CEB/ISEP, School of Engineering, Polytechnic Institute of Porto, Portugal.
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6
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Senthilkumar K, Kondratowicz M, Lis T, Chmielewski PJ, Cybińska J, Zafra JL, Casado J, Vives T, Crassous J, Favereau L, Stępień M. Lemniscular [16]Cycloparaphenylene: A Radially Conjugated Figure-Eight Aromatic Molecule. J Am Chem Soc 2019; 141:7421-7427. [PMID: 30998349 DOI: 10.1021/jacs.9b01797] [Citation(s) in RCA: 109] [Impact Index Per Article: 21.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
A cycloparaphenylene-based molecular lemniscate (CPPL) was obtained in a short synthesis involving masked p-phenylene equivalents. The strained figure-eight geometry of CPPL is sustained by the incorporated 9,9'-bicarbazole subunit, which also acts as a stereogenic element. The shape of the distorted [16]cycloparaphenylene nanohoop embedded in CPPL is accurately approximated with a Booth lemniscate. The structure of CPPL, investigated using NMR and Raman spectroscopic methods, revealed strain-dependent features, consistent with the variable curvature of the ring. The electronic and optical properties of CPPL combine features more characteristic of smaller cycloparaphenylenes, such as a reduced optical bandgap and red-shifted fluorescence. CPPL was resolved into enantiomers, which are configurationally stable and provide strong chiroptical responses, including circularly polarized luminescence.
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Affiliation(s)
- Kabali Senthilkumar
- Wydział Chemii , Uniwersytet Wrocławski , ul. F. Joliot-Curie 14 , 50-383 Wrocław , Poland
| | - Mateusz Kondratowicz
- Wydział Chemii , Uniwersytet Wrocławski , ul. F. Joliot-Curie 14 , 50-383 Wrocław , Poland
| | - Tadeusz Lis
- Wydział Chemii , Uniwersytet Wrocławski , ul. F. Joliot-Curie 14 , 50-383 Wrocław , Poland
| | - Piotr J Chmielewski
- Wydział Chemii , Uniwersytet Wrocławski , ul. F. Joliot-Curie 14 , 50-383 Wrocław , Poland
| | - Joanna Cybińska
- Wydział Chemii , Uniwersytet Wrocławski , ul. F. Joliot-Curie 14 , 50-383 Wrocław , Poland.,PORT - Polski Ośrodek Rozwoju Technologii , ul. Stabłowicka 147 , 54-066 Wrocław , Poland
| | - José L Zafra
- Departamento Química Física , Universidad de Málaga , Andalucia-Tech Campus de Teatinos s/n , 29071 Málaga , Spain
| | - Juan Casado
- Departamento Química Física , Universidad de Málaga , Andalucia-Tech Campus de Teatinos s/n , 29071 Málaga , Spain
| | - Thomas Vives
- Université Rennes, Ecole Nationale Supérieure de Chimie de Rennes , CNRS, ISCR UMR 6226, F-35000 Rennes , France
| | - Jeanne Crassous
- Université Rennes , CNRS, ISCR (Institut des Sciences Chimiques de Rennes) UMR 6226, F-35000 Rennes , France
| | - Ludovic Favereau
- Université Rennes , CNRS, ISCR (Institut des Sciences Chimiques de Rennes) UMR 6226, F-35000 Rennes , France
| | - Marcin Stępień
- Wydział Chemii , Uniwersytet Wrocławski , ul. F. Joliot-Curie 14 , 50-383 Wrocław , Poland
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7
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Muhammad R, Chaudhary M, Mohanty P. Harnessing electron-rich framework in cyclophosphazene derived hybrid nanoporous materials for organocatalytic C C bond formation and gas sorption applications. J CO2 UTIL 2018. [DOI: 10.1016/j.jcou.2018.04.008] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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8
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Muhammad R, Mohanty P. Cyclophosphazene-Based Hybrid Nanoporous Materials as Superior Metal-Free Adsorbents for Gas Sorption Applications. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2018; 34:2926-2932. [PMID: 29420896 DOI: 10.1021/acs.langmuir.7b03263] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Cyclophosphazene-based inorganic-organic hybrid nanoporous materials (CHNMs) have been synthesized by a facile solvothermal method. The condensation of pyrrole with the reaction product of phosphonitrilic chloride trimer and 4-hydroxybenzaldehyde resulted in the formation of high-surface-area CHNMs. The maximum specific surface area (SABET) of 1328 m2 g-1 with hierarchical pore structures having micropores centered at 1.18 nm and mesopores in the range of 2.6-3.6 nm was estimated from the N2 sorption analysis. Observation of high SABET could be attributed to the synergy effect exerted by the cyclophosphazene moiety owing to its three-dimensional paddle wheel structure. The metal-free adsorbent exhibited a high and reversible CO2 uptake of 22.8 wt % at 273 K and 1 bar. The performance is on the higher side among the reported metal-free inorganic-organic hybrid nanoporous adsorbents. Moreover, the high H2 uptake of 2.02 wt % at 77 K and 1 bar is an added advantage. The superior performance of the adsorbents for the gas sorption applications could be attributed to the combined effect of high SABET and hierarchical pore structure, which has made CHNMs good candidates for energy and environmental applications.
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Affiliation(s)
- Raeesh Muhammad
- Functional Materials Laboratory, Department of Chemistry , IIT Roorkee , Roorkee , Uttarakhand 247667 , India
| | - Paritosh Mohanty
- Functional Materials Laboratory, Department of Chemistry , IIT Roorkee , Roorkee , Uttarakhand 247667 , India
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9
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Gu Y, Wang K, Dai Y, Xiao G, Ma Y, Qiao Y, Zou B. Pressure-Induced Emission Enhancement of Carbazole: The Restriction of Intramolecular Vibration. J Phys Chem Lett 2017; 8:4191-4196. [PMID: 28816458 DOI: 10.1021/acs.jpclett.7b01796] [Citation(s) in RCA: 44] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Pressure-induced emission enhancement (PIEE), a novel phenomenon in the enhancement of the solid-state emission efficiency of fluorophores, has been arousing wide attention in recent years. However, research on PIEE is still in the early stage. To further pursue more enhanced efficiency, discovering and designing more PIEE systems would be urgently desirable and of great importance. In this Letter, we found that carbazole presented a conspicuous emission enhancement under high pressure up to 1.0 GPa. In situ high-pressure infrared spectroscopy and angle-dispersive X-ray diffraction analysis combined with Hirshfeld surface theory calculation indicated that the PIEE of carbazole was attributed to the decrease of the nonradiation vibration process. This phenomenon mainly resulted from restriction of the N-H stretching vibration by increased N-H···π interactions under high pressure. Our study puts forward a mechanism of PIEE related to the restriction of intramolecular vibration, which provided deep insight into the essential role of intermolecular interaction in fluorescence emission properties.
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Affiliation(s)
- Yarong Gu
- State Key Laboratory of Superhard Materials, Jilin University , Changchun 130012, China
| | - Kai Wang
- State Key Laboratory of Superhard Materials, Jilin University , Changchun 130012, China
| | - Yuxiang Dai
- State Key Laboratory of Superhard Materials, Jilin University , Changchun 130012, China
| | - Guanjun Xiao
- State Key Laboratory of Superhard Materials, Jilin University , Changchun 130012, China
| | - Yuguo Ma
- Beijing National Laboratory for Molecular Sciences, Centre for the Soft Matter Science and Engineering and the Key Lab of Polymer Chemistry & Physics of the Ministry of Education, College of Chemistry, Peking University , Beijing 100871, China
| | - Yuancun Qiao
- North China Institute of Aerospace Engineering , Langfang 065000, China
| | - Bo Zou
- State Key Laboratory of Superhard Materials, Jilin University , Changchun 130012, China
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10
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Bilkan MT, Şahin O, Yurdakul Ş. Experimental and DFT studies of solvent effects on molecular structure and physical properties of Dipyridylamine pyridine based ligand. J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2016.11.078] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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11
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Botta A, Pragliola S, Capacchione C, Rubino A, Liguori R, De Girolamo Del Mauro A, Venditto V. Synthesis of poly(4-(N-carbazolyl)methyl styrene)s: Tailoring optical properties through stereoregularity. Eur Polym J 2017. [DOI: 10.1016/j.eurpolymj.2017.01.032] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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12
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Pandey M, Muthu S, Nanje Gowda N. Quantum mechanical and spectroscopic (FT-IR, FT-Raman,1H,13C NMR, UV-Vis) studies, NBO, NLO, HOMO, LUMO and Fukui function analysis of 5-Methoxy-1H-benzo[d]imidazole-2(3H)-thione by DFT studies. J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2016.10.064] [Citation(s) in RCA: 50] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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13
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González-Santana S, Morera-Boado C, Montero-Cabrera LA, Trueba M, Trasatti SP. Pyrrolyl–Silicon Compounds as Precursors for Donor–Acceptor Systems Stabilized by Noncovalent Interactions. J Phys Chem A 2015; 119:7038-51. [DOI: 10.1021/acs.jpca.5b04167] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Susana González-Santana
- Department
of Physical Chemistry, Faculty of Chemistry, Universidad de la Habana, Zapata y G, 10400 Ciudad de La Habana, Cuba
| | - Cercis Morera-Boado
- Department
of Physical Chemistry, Faculty of Chemistry, Universidad de la Habana, Zapata y G, 10400 Ciudad de La Habana, Cuba
| | - Luis A. Montero-Cabrera
- Department
of Physical Chemistry, Faculty of Chemistry, Universidad de la Habana, Zapata y G, 10400 Ciudad de La Habana, Cuba
| | - Monica Trueba
- Department
of Chemistry, Università degli Studi di Milano, Via Golgi
19, 20133 Milan, Italy
| | - Stefano P. Trasatti
- Department
of Chemistry, Università degli Studi di Milano, Via Golgi
19, 20133 Milan, Italy
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14
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Korkmaz U, Bulut A, Bulut İ. 3-Phenylpyridinium hydrogen squarate: experimental and computational study of a nonlinear optical material. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2015; 140:140-149. [PMID: 25590828 DOI: 10.1016/j.saa.2014.12.029] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2014] [Revised: 11/20/2014] [Accepted: 12/09/2014] [Indexed: 06/04/2023]
Abstract
The detailed investigation of an organic nonlinear optical (NLO) squarate salt of 3-phenylpyridinium hydrogen squarate (1), C11H10N+·C4HO4(-), was reported in this study. The XRD data indicates that the crystal structure of the title compound is in the triclinic P-1 space group. In the asymmetric unit, the 3-phenylpyridine molecule is protonated by one hydrogen atom donation of squaric acid molecule, forming the salt (1). The X-ray analysis shows that the crystal packing has hydrogen bonding ring pattern of D2(2)(10) (α-dimer) through NH···O interactions. The structural and vibrational properties of the compound were also studied by computational methods of ab initio at DFT/B3LYP/6-31++G(d,p) (2) and HF/6-31++G(d,p) (3) levels of theory. The calculation results on the basis of two models for both the optimized molecular structure and vibrational properties for the 1 are presented and compared with the experimental results. Non-linear optical properties (NLO) of the title compound together with the molecular electrostatic potential (MEP), electronic absorption spectrum, frontier molecular orbitals (FMOs) and conformational flexibility were also studied at the 2 level and the results were reported. In order to evaluate the suitability for NLO applications thermal analysis (TG, DTA and DTG) data of 1 were also obtained.
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Affiliation(s)
- Ufuk Korkmaz
- Department of Physics, Faculty of Arts and Sciences, Ondokuzmayıs University, Kurupelit, 55139 Samsun, Turkey
| | - Ahmet Bulut
- Department of Physics, Faculty of Arts and Sciences, Ondokuzmayıs University, Kurupelit, 55139 Samsun, Turkey
| | - İclal Bulut
- Department of Chemistry, Faculty of Engineering, Ondokuzmayıs University, Kurupelit, 55139 Samsun, Turkey
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15
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Sasaki T, Yoshida Y, Mawatari Y, Tabata M. Remarkably Stretched Cis–Transoid Helices Generated in Solid Phase and Solution of Poly(carbazole acetylene) Prepared Using an Organorhodium Catalyst in Toluene. Macromolecules 2015. [DOI: 10.1021/ma5024654] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Takahiro Sasaki
- Department
of Applied Chemistry, Graduate School of Engineering, Muroran Institute of Technology, 27-1 Mizumoto-cho, Muroran, Hokkaido 050-8585, Japan
| | - Yoshiaki Yoshida
- Department
of Applied Chemistry, Graduate School of Engineering, Muroran Institute of Technology, 27-1 Mizumoto-cho, Muroran, Hokkaido 050-8585, Japan
| | - Yasuteru Mawatari
- Department
of Applied Chemistry, Graduate School of Engineering, Muroran Institute of Technology, 27-1 Mizumoto-cho, Muroran, Hokkaido 050-8585, Japan
- Research
Center for Environmentally Friendly Materials Engineering, Muroran Institute of Technology, 27-1 Mizumoto-cho, Muroran, Hokkaido 050-8585, Japan
| | - Masayoshi Tabata
- Department
of Applied Chemistry, Graduate School of Engineering, Muroran Institute of Technology, 27-1 Mizumoto-cho, Muroran, Hokkaido 050-8585, Japan
- Research
Center for Environmentally Friendly Materials Engineering, Muroran Institute of Technology, 27-1 Mizumoto-cho, Muroran, Hokkaido 050-8585, Japan
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16
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Korkmaz U, Bulut A. 2-Pyridinium propanol hydrogen squarate: experimental and computational study of a nonlinear optical material. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2015; 136 Pt B:1058-1068. [PMID: 25459503 DOI: 10.1016/j.saa.2014.09.130] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2014] [Revised: 09/26/2014] [Accepted: 09/30/2014] [Indexed: 06/04/2023]
Abstract
The experimental and theoretical investigation of a novel organic nonlinear optical (NLO) squarate salt of 2-pyridinium propanol hydrogen squarate (1), C8H12ON(+)·C4HO4(-), were reported in this study. The crystal structure of the title compound was found to crystallize in the triclinic P-1 space group. In the asymmetric unit each squaric acid molecules have donated one H atom to the pyridines N1 and N2 atoms of a 2-pyridine propanol molecule, forming the salt (1). The X-ray analysis clearly indicated that the crystal packing has shown the hydrogen bonding ring pattern of D2(2)(10) (α-dimer) through N-H⋯O interactions. The structural and vibrational properties of the compound were also studied by computational methods of ab initio performed on the compound at DFT/B3LYP/6-31++G(d,p) (2) and HF/6-31++G(d,p) (3) level of theory. The calculation results on the basis of two models for both the optimized molecular structure and vibrational properties for the 1 are presented and compared with the X-ray analysis result. The molecular electrostatic potential (MEP), electronic absorption spectra, frontier molecular orbitals (FMOs), conformational flexibility and non-linear optical properties (NLO) of the title compound were also studied at the 2 level and the results are reported. In order to evaluate the suitability for NLO applications thermal analysis (TG, DTA and DTG) data of 1 were also obtained.
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Affiliation(s)
- Ufuk Korkmaz
- Department of Physics, Faculty of Arts and Sciences, Ondokuzmayıs University, Kurupelit, 55139 Samsun, Turkey
| | - Ahmet Bulut
- Department of Physics, Faculty of Arts and Sciences, Ondokuzmayıs University, Kurupelit, 55139 Samsun, Turkey
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Korkmaz U, Topçu Y, Taş M, Bulut A. Synthesis, an experimental and quantum chemical computational study: proton sharing in 4-Morpholinium bis(hydrogen squarate). SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2015; 134:233-243. [PMID: 25022494 DOI: 10.1016/j.saa.2014.06.100] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/12/2014] [Revised: 06/05/2014] [Accepted: 06/16/2014] [Indexed: 06/03/2023]
Abstract
The experimental and theoretical investigation results of a novel organic squarate salt of 4-Morpholinium bis(hydrogen squarate) (1), C₆H₁₄ON(+)·C₈H₃O₈(-), were reported in this study. The crystal structure of the title compound was found to crystallize in the triclinic P-1 space group. In the crystals of 1 the morpholine ring adopts the chair conformation with the ethyl group in the equatorial and hydrogen atoms in axial positions. The hydrogen squarate anions are linked into a homoconjugated anion, [(HSQ)₂H], by a short symmetric, nonlinear O₈⋯H₂⋯O₂ hydrogen bond of 2.444 (2)Å. The structural and vibrational properties of the compound were also studied by computational methods of ab-initio performed on the compound at DFT/B3LYP/6-31++G(d,p) (2) and HF/6-31++G(d,p) (3) level of theory. The obtained calculation results on the basis of two models for both the optimized molecular structure and vibrational properties for the 1 obtained are presented and compared with the X-ray analysis result. On the other hand the molecular electrostatic potential (MEP), electronic absorption spectra, frontier molecular orbitals (FMOs), conformational flexibility and non-linear optical properties (NLO) of the title compound were also studied at the 2 level and the results are reported. In order to evaluate the suitability for NLO applications thermal analysis (TG, DTA and DTG) data of 1 were also obtained.
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Affiliation(s)
- Ufuk Korkmaz
- Department of Physics, Faculty of Arts and Sciences, Ondokuzmayıs University, 55139 Kurupelit, Samsun, Turkey.
| | - Yıldıray Topçu
- Ondokuz Mayıs University, Faculty of Engineering, Chemical Engineering Department, 55139 Kurupelit, Samsun, Turkey
| | - Murat Taş
- Department of Chemistry, Faculty of Arts and Sciences, Giresun University, 28049 Giresun, Turkey
| | - Ahmet Bulut
- Department of Physics, Faculty of Arts and Sciences, Ondokuzmayıs University, 55139 Kurupelit, Samsun, Turkey
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18
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Korkmaz U, Bulut A. Synthesis, an experimental and quantum chemical computational study of a new nonlinear optical material: 2-picolinium hydrogensquarate. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2014; 130:376-385. [PMID: 24813271 DOI: 10.1016/j.saa.2014.04.038] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2014] [Revised: 04/04/2014] [Accepted: 04/07/2014] [Indexed: 06/03/2023]
Abstract
The experimental and theoretical investigation results of a novel organic non-linear optical (NLO) organic squarate salt of 2-Picolinium hydrogensquarate (1), C6H8N+·C4HO4-, were reported in this study. The space group of the title compound was found in the monoclinic C2/c space group. It was found that the asymmetric unit consists of one monohydrogen squarate anion together with mono protonated 2-Picolinium, forming the (1) salt. The X-ray analysis clearly indicated that the crystal packing has shown the hydrogen bonding ring pattern of D2(2)(10) (α-dimer) through NH⋯O interactions. The hydrogensquarate anions form α-dimer, while 2-Picolinium molecule interacts through NH⋯O and CH⋯O with the hydrogensquarate anion. The structural and vibrational properties of the compound were also studied by computational methods of ab initio performed on the compound at DFT/B3LYP/6-31++G(d,p) (2) and HF/6-31++G(d,p) (3) level of theory. The calculation results on the basis of two models for both the optimized molecular structure and vibrational properties for the 1 obtained are presented and compared with the X-ray analysis result. On the other the molecular electrostatic potential (MEP), electronic absorption spectra, frontier molecular orbitals (FMOs), conformational flexibility and non-linear optical properties (NLO) of the title compound were also studied at the 2 level and the results are reported. In order to evaluate the suitability for NLO applications thermal analysis (TG, DTA and DTG) data of 1 were also obtained.
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Affiliation(s)
- Ufuk Korkmaz
- Department of Physics, Faculty of Arts and Sciences, Ondokuzmayıs University, Kurupelit 55139, Samsun, Turkey.
| | - Ahmet Bulut
- Department of Physics, Faculty of Arts and Sciences, Ondokuzmayıs University, Kurupelit 55139, Samsun, Turkey
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González-Henríquez CM, Terraza CA, Sarabia M. Theoretical and Experimental Vibrational Spectroscopic Investigation of Two R1R2-Diphenylsilyl-Containing Monomers and Their Optically Active Derivative Polymer. J Phys Chem A 2014; 118:1175-84. [PMID: 24471743 DOI: 10.1021/jp409178j] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Carmen M. González-Henríquez
- Universidad Tecnológica Metropolitana, Facultad de Ciencias Naturales,
Matemáticas y del Medio Ambiente, Casilla 9845, Correo 21, Santiago, Chile
| | - Claudio A. Terraza
- Pontificia Universidad Católica de Chile, Facultad de Química, P.O. Box 306, Correo 22, Santiago, Chile
| | - Mauricio Sarabia
- Pontificia Universidad Católica de Chile, Facultad de Física, P.O. Box 601, Correo 22, Santiago, Chile
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20
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Epshtein M, Portnov A, Mayorkas N, Rosenwaks S, Brauer B, Bar I. Revealing the hot bands in the regions of the N-H and C-H stretch fundamentals of pyrrole. J Phys Chem A 2013; 117:11618-23. [PMID: 23140263 DOI: 10.1021/jp307645j] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Photoacoustic Raman spectra of gaseous pyrrole in the 3504-3535 and 3068-3152 cm(-1) energetic windows were measured, to obtain new information about the hot bands in the vicinity of the N-H(ν1) and C-H(ν2) stretch fundamentals, respectively. The observed vibrational patterns are characterized by sharp Q-branches, where the strong bands reflect the fundamentals and the weaker ones, as established from their temperature dependence, are hot bands. From the simulation of the observed spectra, the band origins and nondiagonal anharmonicities were determined. Comparison of the latter values to the anharmonicities, x(ij) (i = 1, 2 and j = 16, 15, 14, 12, 11) obtained from anharmonic calculations at the B3LYP/6-311++G(d,p), B3LYP/cc-pVQZ and MP2/cc-pVTZ levels, aided the tentative assignment of the hot bands. The retrieved parameters add new data to the extensive set of already known vibrational constants of pyrrole.
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Affiliation(s)
- Michael Epshtein
- Department of Physics, Ben-Gurion University of the Negev , Beer-Sheva 84105, Israel
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21
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Korkmaz U, Bulut A. 2-(Ammoniummethyl) pyridinium dihydrogen squarate hydrate: An experimental and theoretical study. J Mol Struct 2013. [DOI: 10.1016/j.molstruc.2013.07.026] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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22
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Tereci H, Askeroğlu İ, Akdemir N, Uçar İ, Büyükgüngör O. Combined experimental and theoretical approaches to the molecular structure of 4-(1-formylnaphthalen-2-yloxy)phthalonitrile. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2012; 96:569-577. [PMID: 22864392 DOI: 10.1016/j.saa.2012.07.005] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2012] [Revised: 06/06/2012] [Accepted: 07/05/2012] [Indexed: 06/01/2023]
Abstract
The novel compound 4-(1-formylnaphthalen-2-yloxy)phthalonitrile, C(19)H(10)N(2)O(2,) has been synthesized and characterized by IR, UV-vis, NMR and X-ray single-crystal determination. The title compound, is built up from two planar groups (naphthalen and phthalonitrile), with a dihedral angle of 64.10(4)° between them. The crystal structure is stabilized by weak C-H···O hydrogen-bond and π-π interactions. The structural and spectroscopic data of the compound in the ground state have been calculated using density functional theory (DFT) and Hartree-Fock (HF) with the 6-31G(d,p) basis set. The vibrational study was interpreted in terms of potential energy distribution (PED). The observed wave number in FT-IR spectra was analyzed and assigned to different normal modes of the molecule. Using the TD-DFT and TD-HF methods, electronic absorption spectra of the title compound were predicted and good agreement with the TD-DFT method and the experimental determination was found. Isotropic chemical shifts ((13)C and (1)H NMR) were calculated using the gauge-invariant atomic orbital (GIAO) method. The HOMO and LUMO analyses were used to elucidate information regarding charge transfer within the molecule.
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Affiliation(s)
- Hidayet Tereci
- Department of Physics, Faculty of Arts and Sciences, Gaziosmanpaşa University, Gaziosmanpaşa Üniversitesi, Taşlıçiftlik Yerleşkesi, 60250 Tokat, Turkey
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23
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Zhang S, Qu Z, Tao P, Brooks B, Shao Y, Chen X, Liu C. A Quantum Chemical Study of the Ground and Excited State Electronic Structures of Carbazole Oligomers with and without Triarylborane Substitutes. THE JOURNAL OF PHYSICAL CHEMISTRY. C, NANOMATERIALS AND INTERFACES 2012; 116:12434-12442. [PMID: 22754601 PMCID: PMC3384501 DOI: 10.1021/jp3027447] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
Recent experimental investigation (Reitzenstein and Lambert,Macromolecules, 2009, 42, 773) indicated that the quite different optical properties of 2,7- and 3,6-linkage triarylboryl carbazole oligomers may arise from the different nature of their low-lying excited states: a low-lying delocalized within-backbone excitation in longer 2,7-linked oligomers vs a backbone-to-sidechain charge-transfer (CT) excitation independent of the polymerization length in 3,6-linked oligomers. Here in this paper, two long-range corrected functionals, CAM-B3LYP and ωB97X, are applied together with the traditional B3LYP functional in time-dependent density functional theory (TDDFT) calculations to systematically investigate the low-lying electronic excitations in both oligomers. Our calculations indicate that an extensive conjugation exists between monomer molecular orbitals in 2,7-linked oligomers, which is absent in those of 3,6-linked structures, resulting in a considerable narrowing of the HOMO-LUMO gap of their backbone moiety, while having little effect on the side-chains. CAM-B3LYP and ωB97x calculations confirm that the lowest-energy absorption is a within-backbone excitation in longer 2,7-linked oligomers as opposed to a backbone to side-chain charge transfer excitation in 2,7-linked oligmers of shorter length and 3,6-linked oligomers of any length. All these findings are consistent with the experimental findings and the qualitative energy diagram proposed by Reitzenstein and Lambert.
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Affiliation(s)
- Shushu Zhang
- Institute of Theoretical and Computational Chemistry, Key Laboratory of Mesoscopic Chemistry of the Ministry of Education (MOE), School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, 210093, China
- Laboratory of Molecular Imaging and Nanomedicine, National Institute of Biomedical Imaging and Bioengineering, National Institutes of Health, Bethesda, MD 20892, USA
| | - Zexing Qu
- Institute of Theoretical and Computational Chemistry, Key Laboratory of Mesoscopic Chemistry of the Ministry of Education (MOE), School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, 210093, China
| | - Peng Tao
- Laboratory of Computational Biology, National Heart Lung and Blood Institute, National Institutes of Health, Bethesda, MD 20892, USA
| | - Bernard Brooks
- Laboratory of Computational Biology, National Heart Lung and Blood Institute, National Institutes of Health, Bethesda, MD 20892, USA
| | - Yihan Shao
- Q-Chem Inc., 5001 Baum Blvd, Suite 690, Pittsburgh, PA 15213, USA
| | - Xiaoyuan Chen
- Laboratory of Molecular Imaging and Nanomedicine, National Institute of Biomedical Imaging and Bioengineering, National Institutes of Health, Bethesda, MD 20892, USA
| | - Chungen Liu
- Institute of Theoretical and Computational Chemistry, Key Laboratory of Mesoscopic Chemistry of the Ministry of Education (MOE), School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, 210093, China
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Yurdakul S, Badoğlu S. FT-IR and FT-Raman spectroscopic and DFT theoretical studies on 4-azabenzimidazole. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2012; 89:252-258. [PMID: 22265951 DOI: 10.1016/j.saa.2011.12.073] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2011] [Revised: 12/09/2011] [Accepted: 12/28/2011] [Indexed: 05/31/2023]
Abstract
The Becke, three-parameter, Lee-Yang-Parr exchange-correlation functional have been used to study the geometry, relative energy, frequency and intensity of the vibrational bands of the 4-azabenzimidazole (4AB) tautomers and the most stable tautomer's homodimers. FT-IR and Raman spectra of the 4AB have been measured in the regions 4000-100 cm(-1) and 3500-100 cm(-1), respectively for the first time. The stability of 4AB tautomers were reported. All vibrational frequencies assigned in detail with the help of total energy distribution (TED) and isotopic shifts. The energy and atomic charges were discussed. NH⋯N type intermolecular hydrogen bonding interactions were suggested for 4AB dimeric forms. 1H and 13C NMR properties have been calculated for the most stable two tautomeric forms using the gauge independent atomic orbital (GIAO) method.
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Affiliation(s)
- Senay Yurdakul
- Department of Physics, Faculty of Science, Gazi University, Teknikokullar, 06500 Ankara, Turkey.
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25
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Miller BJ, Du L, Steel TJ, Paul AJ, Södergren AH, Lane JR, Henry BR, Kjaergaard HG. Absolute Intensities of NH-Stretching Transitions in Dimethylamine and Pyrrole. J Phys Chem A 2011; 116:290-6. [DOI: 10.1021/jp209118p] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Benjamin J. Miller
- Department of Chemistry, University of Otago, P.O. Box 56, Dunedin, New Zealand
| | - Lin Du
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen Ø, Denmark
| | - Thomas J. Steel
- Department of Chemistry, University of Otago, P.O. Box 56, Dunedin, New Zealand
| | - Allanah J. Paul
- Department of Chemistry, University of Otago, P.O. Box 56, Dunedin, New Zealand
| | - A. Helena Södergren
- Department of Chemistry, University of Otago, P.O. Box 56, Dunedin, New Zealand
| | - Joseph R. Lane
- Department of Chemistry, University of Waikato, Private Bag 3105, Hamilton 3240, New Zealand
| | - Bryan R. Henry
- Department of Chemistry, University of Guelph, N1G 2W1, Guelph, Ontario, Canada
| | - Henrik G. Kjaergaard
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen Ø, Denmark
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26
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FT-IR, FT-Raman, vibrational assignments, and density functional studies of 1,2,4-triazole-3-carboxylic acid, and its tautomers, dimers. Struct Chem 2011. [DOI: 10.1007/s11224-011-9868-y] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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27
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Avcı D, Atalay Y, Cömert H, Dinçer M. DFT Calculations on the Molecular Structure, Vibrational and Chemical Shift Assignments of 4-Allyl-2-(morpholin-4-ylmethyl)-5-(pyridin-4-yl)-2,4-Dihydro-3H-1,2,4-Triazole-3-Thione. ARABIAN JOURNAL FOR SCIENCE AND ENGINEERING 2011. [DOI: 10.1007/s13369-011-0059-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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28
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Three forms of squaric acid with pyrazine and pyridine derivatives: an experimental and theoretical study. Struct Chem 2011. [DOI: 10.1007/s11224-011-9819-7] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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29
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Yuksektepe C, Saracoglu H, Caliskan N, Yilmaz I, Cukurovali A. Experimental and ab initio Computational Studies on Dimethyl-(4-{4-{3-methyl-3-phenyl-cyclobutyl)-thiazol-2-yl]-hydrazonomethyl}-phenyl)-amine. B KOREAN CHEM SOC 2010. [DOI: 10.5012/bkcs.2010.31.12.3553] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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30
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Molecular structure and vibrational and chemical shift assignments of 3,5-bis-(4-methylbenzoyl)-2,6-bis(4-methylphenyl)-4H-pyran-4-one: A combined experimental and theoretical analysis. J Mol Struct 2010. [DOI: 10.1016/j.molstruc.2010.04.029] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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31
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Gökce H, Bahçeli S. Analysis of molecular structure and vibrational spectra of 1(2H)-phthalazinone. J Mol Struct 2010. [DOI: 10.1016/j.molstruc.2009.12.035] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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32
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Avci D, Atalay Y, Sekerci M, Dinçer M. Molecular structure and vibrational and chemical shift assignments of 3-(2-hydroxyphenyl)-4-phenyl-1H-1,2,4-triazole-5-(4H)-thione by DFT and ab initio HF calculations. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2009; 73:212-217. [PMID: 19264542 DOI: 10.1016/j.saa.2009.01.020] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2008] [Revised: 01/07/2009] [Accepted: 01/20/2009] [Indexed: 05/27/2023]
Abstract
The molecular geometry, vibrational frequencies, gauge including atomic orbital (GIAO) 1H and 13C chemical shift values and several thermodynamic parameters of 3-(2-Hydroxyphenyl)-4-phenyl-1H-1,2,4-triazole-5-(4H)-thione in the ground state have been calculated by using the Hartree-Fock (HF) and density functional methods (BLYP and B3LYP) with 6-31G(d) basis set. The results of the optimized molecular structure are presented and compared with the experimental X-ray diffraction. The molecule contains one O-H...N and one C-H...pi (phenyl) intramolecular interactions. The computed vibrational frequencies are used to determine the types of molecular motions associated with each of the experimental bands observed. Data of the title compound display significant structure-correlation and provide the basis for future design of efficient materials having the derivatives of 1,2,4-triazole. Also, calculated 1H chemical shift values compared with the experimental ones.
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Affiliation(s)
- Davut Avci
- Sakarya University, Faculty of Art and Science, Department of Physics, 54140, Adapazari, Turkey
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33
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Experimental and theoretical investigation of the molecular and electronic structure of 5-(4-aminophenyl)-4-(3-methyl-3-phenylcyclobutyl)thiazol-2-amine. J Mol Model 2009; 15:1435-45. [DOI: 10.1007/s00894-009-0509-y] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2009] [Accepted: 03/23/2009] [Indexed: 10/20/2022]
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34
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FT-IR spectra, vibrational assignments, and density functional calculations of imidazo[1,2-a]pyridine molecule and its Zn(II) halide complexes. Struct Chem 2009. [DOI: 10.1007/s11224-009-9433-0] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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35
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Dai Y, Blaisten-Barojas E. Energetics, structure, and charge distribution of reduced and oxidized n-pyrrole oligomers: a density functional approach. J Chem Phys 2009; 129:164903. [PMID: 19045310 DOI: 10.1063/1.2996297] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Polypyrrole is a conjugated polymer prototype of conducting polymers. The energetically preferred spatial conformation of n-pyrrole oligomers (n=1-24) in both the reduced and oxidized phases is obtained and analyzed in this paper within the hybrid density functional theory. Binding energies, gap energies, radius of gyration, end-to-end distance, and vibrational frequencies are reported as functions of oligomer length. Reduced n-pyrrole are bent chains for all sizes showing a dramatic departure from planarity. Vibrational spectra of n-pyrrole oligomers indicate the presence of two fairly size-insensitive frequency regions, which increase in intensity with increasing oligomer size. Several oxidation levels were analyzed for n-pyrrole through the distribution of the carbon-carbon bond orders and single/double bond lengths. It is shown that the oxidation level is directly related to the way positive charge localizes along the n-pyrrole oligomer chain. If charge/n<13, the oligomers are bent and charge is delocalized; if charge/n>/=13, the oligomers are planar and charge notoriously localizes in n/charge regions along the backbone. Calculations with electronegative dopants show that charge localizes in the neighborhood of the dopant. It is demonstrated that one localized state in the gap between the highest occupied and lowest-unoccupied states appears for every +2e in the oxidation level. The band structure of infinite reduced polypyrrole gives a band gap energy in excellent agreement with experiment. The evolution of the band gap and the charge-localized band as a function of polypyrrole oxidation level is reported.
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Affiliation(s)
- Yafei Dai
- Computational Materials Science Center and Department of Computational and Data Sciences, George Mason University, Fairfax, Virginia 22030, USA
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36
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Sun S, Tang H, Wu P. Tracing dynamic self-disassociation behavior of pyrrole with novel T-shaped hydrogen bonding. Phys Chem Chem Phys 2009; 11:7611-8. [DOI: 10.1039/b906773f] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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37
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Atalay Y, Avci D, Başoğlu A. Molecular structure, vibrational and chemical shift assignments of 8-hydroxy-1-methylquinolinium iodide hydrate by density functional theory (DFT) and ab initio Hartree-Fock (HF) calculations. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2008; 71:760-765. [PMID: 18358768 DOI: 10.1016/j.saa.2008.01.037] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/25/2007] [Accepted: 01/28/2008] [Indexed: 05/26/2023]
Abstract
The molecular geometry, the normal mode frequencies and corresponding vibrational assignments, (1)H and (13)C NMR chemical shift values of 8-hydroxy-1-methylquinolinium iodide monohydrate [(C(10)H(10)NO)(+)I(-)H(2)O] in the ground state were performed by HF and B3LYP levels of theory using the LanL2DZ basis set. The optimized bond lengths and bond angles are in good agreement with the X-ray data. The vibrational spectra of the title compound which is calculated by HF and DFT methods, reproduces vibrational wave numbers and intensities with an accuracy which allows reliable vibrational assignments. The title compound [(C(10)H(10)NO)(+)I(-)H(2)O] have been studied theoretically in the 4, 000-200 cm(-1) region and the assignment of all the observed bands were made. The analysis of the infrared spectra indicates that there are some structure-spectra correlations. These methods are proposed as a tool to be applied in the structural characterization of 8-hydroxy-1-methylquinolinium iodide monohydrate [(C(10)H(10)NO)(+)I(-)H(2)O], and thus providing useful support in the interpretation of experimental NMR data.
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Affiliation(s)
- Yusuf Atalay
- Sakarya Universitesi, Fen Edebiyat Fakültesi, Fizik Bölümü, Sakarya 54100, Turkey.
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38
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Dinçer M, Özdemir N, Çukurovalı A, Büyükgüngör O. Experimental and ab initio computational studies on 5-(4-aminophenyl)-4-(3-methyl-3-phenylcyclobutyl)thiazol-2-amine. Struct Chem 2008. [DOI: 10.1007/s11224-008-9387-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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39
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Song Y, Zhang L, Shi D, Xie J, Zhao G. Theoretical study on the geometry and vibration of 1-[6-(4-Chlorophenyl)-1-[(6-chloropyridin-3-yl)methyl]-2-[(6-chloropyridin-3-yl)methylsulfanyl]-4-methyl-1,6-dihydropyrimidin-5-yl]ethanone. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2008; 70:943-952. [PMID: 18343716 DOI: 10.1016/j.saa.2008.01.029] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2007] [Revised: 01/15/2008] [Accepted: 01/22/2008] [Indexed: 05/26/2023]
Abstract
The solid phase FT-IR and FT-Raman spectra of 1-[6-(4-chlorophenyl)-1-[(6-chloropyridin-3-yl)methyl]-2-[(6-chloropyridin-3-yl)methylsulfanyl]-4-methyl-1,6-dihydropyrimidin-5-yl]ethanone (C25H21Cl3N4OS) were recorded in the region 4000-400 and 3500-100cm(-1), respectively. The vibrational spectra have been computed using density functional theory (B3LYP) and ab initio molecular orbital calculation (HF) with 6-31G(d, p) basis sets. A close agreement was achieved between the observed and calculated frequency by employing normal coordinate calculations. The observed and simulated spectra were found to be well comparable.
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Affiliation(s)
- Yuanzhi Song
- Key Laboratory for Chemistry of Low-Dimensional Materials, Jiangsu Province, Chemistry Department, Huaiyin Teachers College, Huaian 223300, People's Republic of China.
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Dinçer M, Avcı D, Şekerci M, Atalay Y. Molecular structure and vibrational and chemical shift assignments of 5-(2-Hydroxyphenyl)-4-(p-tolyl)-2,4-dihydro-1,2,4-triazole-3-thione by DFT and ab initio HF calculations. J Mol Model 2008; 14:823-32. [DOI: 10.1007/s00894-008-0324-x] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2007] [Accepted: 05/26/2008] [Indexed: 11/30/2022]
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41
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Theoretical and experimental study of molecular structure and vibrational spectra of N-(2-pyridylmethyl)-2-pyrazinecarboxamide. MONATSHEFTE FUR CHEMIE 2008. [DOI: 10.1007/s00706-007-0830-z] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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42
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Atalay Y, Başoğlu A, Avci D. Molecular structure, IR and NMR spectra of 2,6 distyrylpyridine by density functional theory and ab initio Hartree-Fock calculations. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2008; 69:460-6. [PMID: 17540615 DOI: 10.1016/j.saa.2007.04.022] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/10/2006] [Accepted: 04/19/2007] [Indexed: 05/15/2023]
Abstract
Vibrational frequencies and gauge including atomic orbital (GIAO) 13C NMR and 1H NMR chemical shift values of 2,6 distyrylpyridine (C21H17N) in the ground state have been calculated by using the Hartree-Fock (HF) and density functional method (B3LYP) with 6-31G(d) basis set. These methods are proposed as a tool to be applied in the structural characterization of 2,6 distyrylpyridine (C21H17N). The title compound has C2v point group, thus providing useful support in the interpretation of experimental IR data. In addition, obtained results were related to the linear correlation plot of experimental 13C NMR, 1H NMR chemical shifts values and IR data.
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Affiliation(s)
- Y Atalay
- Sakarya Universitesi, Esentepe Kampüsü, Fen-Edebiyat Fakültesi Fizik Bölümü, Sakarya 54140, Turkey.
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43
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Yang L, Feng JK, Ren AM. Theoretical study on electronic structure and optical properties of novel donor–acceptor conjugated copolymers derived from benzothiadiazole and benzoselenadiazole. ACTA ACUST UNITED AC 2007. [DOI: 10.1016/j.theochem.2007.04.014] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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44
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Feki H, Fourati N, Abid Y, Minot C. The molecular structure and vibrational spectra of 3-acetyl-4-[N-(2'-aminopyridinyl)-3-amino]-3-buten-2-one by Hartree-Fock and density functional theory calculations. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2007; 67:1201-5. [PMID: 17113822 DOI: 10.1016/j.saa.2006.10.008] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2006] [Accepted: 10/05/2006] [Indexed: 05/12/2023]
Abstract
The molecular structure and vibrational spectra of 3-acetyl-4-[N-(2'-aminopyridinyl)-3-amino]-3-buten-2-one (C(11)H(13)N(3)O(2)) in the ground state have been investigated by Hartree-Fock and density functional method (B3LYP and BLYP) with 6-31G(d) basis set. The optimized geometric bond lengths and bond angles obtained by using HF and DFT show the best agreement with the experimental data. Comparison of the observed fundamental vibrational frequencies of title compound and calculated results by HF and DFT methods indicate that B3LYP is superior to the scaled HF approach for molecular problems.
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Affiliation(s)
- H Feki
- Laboratoire de Physique appliquée, Faculté des Sciences 3018, BP 802, Sfax, Tunisia.
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45
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Atalay Y, Avci D. Theoretical studies of molecular structure and vibrational spectra of melaminium citrate. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2007; 67:327-33. [PMID: 16965934 DOI: 10.1016/j.saa.2006.07.022] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/24/2006] [Revised: 05/30/2006] [Accepted: 07/14/2006] [Indexed: 05/11/2023]
Abstract
The molecular geometry and vibrational frequencies of melaminium citrate in the ground state have been calculated using the Hartree-Fock (HF) and density functional method (B3LYP) with 6-31G(d) basis set. The optimized geometric bond lengths and bond angles obtained by using HF and density functional theory (DFT, B3LYP) show the best agreement with the experimental data. Comparison of the observed fundamental vibrational frequencies of melaminium citrate and calculated results by density functional B3LYP and Hartree-Fock methods indicate that B3LYP is superior to the scaled Hartree-Fock approach for molecular vibrational problems.
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Affiliation(s)
- Y Atalay
- Sakarya Universitesi Fen Edebiyat Fakültesi Fizik Bölümü, Sakarya 54100, Turkey.
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46
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Sekerci M, Atalay Y, Yakuphanoglu F, Avci D, Başoğlu A. A theoretical study on 1-(thiophen-2-yl-methyl)-2-(thiophen-2-yl)-1H-benzimidazole. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2007; 67:503-8. [PMID: 17142090 DOI: 10.1016/j.saa.2006.08.007] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/02/2005] [Revised: 08/03/2006] [Accepted: 08/07/2006] [Indexed: 05/12/2023]
Abstract
The molecular geometry and vibrational frequencies of 1-(thiophen-2-yl-methyl)-2-(thiophen-2-yl)-1H-benzimidazole (C(16)H(12)N(2)S(2)) in the ground state has been calculated using the Hartree-Fock (HF) and density functional method (B3LYP) with 6-31G(d) basis set. The optimized geometric bond lengths and bond angles obtained by using HF and DFT (B3LYP) show the best agreement with the experimental data. Comparison of the observed fundamental vibrational frequencies of 1-(thiophen-2-yl-methyl)-2-(thiophen-2-yl)-1H-benzimidazole (C(16)H(12)N(2)S(2)) and calculated results by density functional B3LYP and Hartree-Fock methods indicate that B3LYP is superior to the scaled Hartree-Fock approach for molecular vibrational problems.
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Affiliation(s)
- M Sekerci
- Firat University, Faculty of Arts and Sciences, Department of Chemistry, Elazig, Turkey
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47
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Yakuphanoglu F, Atalay Y, Sekerci M. A theoretical study on N-phenyl-N'-(2-thienylmethylene)hydrazine. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2007; 66:438-41. [PMID: 16859978 DOI: 10.1016/j.saa.2006.03.019] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/07/2006] [Revised: 03/07/2006] [Accepted: 03/22/2006] [Indexed: 05/11/2023]
Abstract
The molecular geometry and vibrational frequencies of N-phenyl-N'-(2-thienylmethylene)hydrazine (C11H10N2S) have been calculated using Hartree-Fock and density functional method (B3LYP) with 6-31G(d) basis set. The optimized geometric bond lengths and angles obtained using HF and DFT (B3LYP) are in agreement with the experimental data. B3LYP method seems to be appropriate than HF method for the calculation of vibrational frequencies and geometrical parameters of the (C11H10N2S) compound.
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Affiliation(s)
- F Yakuphanoglu
- Firat University, Faculty of Arts and Sciences, Department of Physics, Elazig, Turkey.
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McNaughton D, Godfrey PD, Brown RD, Thorwirth S. Millimetre wave spectroscopy of PANHs: phenanthridine. Phys Chem Chem Phys 2007; 9:591-5. [PMID: 17242740 DOI: 10.1039/b615485a] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The pure rotational spectrum of phenanthridine (C(13)H(9)N), a small polycyclic aromatic nitrogen heterocycle (PANH), has been measured from 48 to 85 GHz employing Stark modulated millimetre wave absorption spectroscopy of a supersonic rotationally cold molecular beam. Initial survey search scans were guided by rotational constants obtained through quantum chemical calculations performed at the B3LYP/cc-pVTZ level of theory. Close agreement--to well within 1%--is found between the calculated equilibrium and experimentally derived ground state rotational constants. From the moments of inertia a substantial negative inertial defect of Delta = -0.4688(44) amu Angstroms(2) is obtained which can be explained by the presence of several energetically low-lying out-of-plane vibrational modes. Corresponding density functional theory calculations of harmonic fundamental frequencies indeed yield four such low frequency modes with values as low as 96 cm(-1). The data presented here will also be useful for deep radio astronomical searches for PANHs employing large radio telescopes.
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Affiliation(s)
- Don McNaughton
- School of Chemistry, Monash University, Clayton, Victoria, Australia.
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49
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Atalay Y, Ucun F, Avci D, Başoğlu A. Vibrational spectra and molecular structure of chiral and racemic 4-phenyl-1,3-oxazolidin-2-one by density functional theory and ab initio Hartree-Fock calculations. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2006; 64:549-54. [PMID: 16442841 DOI: 10.1016/j.saa.2005.07.078] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2005] [Revised: 07/22/2005] [Accepted: 07/29/2005] [Indexed: 05/06/2023]
Abstract
The vibrational frequencies and molecular geometry of (R)- and (rac)-4-phenly-1,3-oxazolidin-2-one (4-POO) in the ground state have been calculated using the Hartree-Fock and density functional method (B3LYP) with 6-31G(d) basis set. The optimized geometric bond lengths are described better by HF while bond angles are reproduced more accurately by DFT (B3LYP). Comparison of the observed fundamental vibrational frequencies of (R)-POO and (rac)-4-POO and calculated results by density functional B3LYP and Hartree-Fock methods indicate that B3LYP is superior to the scaled Hartree-Fock approach for molecular vibrational problems.
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Affiliation(s)
- Y Atalay
- Sakarya Universitesi Fen-Edebiyat Fakültesi Fizik Bölümü, Sakarya 54100, Turkey.
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50
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Atalay Y, Yakuphanoglu F, Sekerci M, Avci D, Başoğlu A. Theoretical studies of molecular structure and vibrational spectra of 2-amino-5-phenyl-1,3,4-thiadiazole. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2006; 64:68-72. [PMID: 16095959 DOI: 10.1016/j.saa.2005.06.038] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/08/2005] [Accepted: 06/29/2005] [Indexed: 05/03/2023]
Abstract
The molecular geometry and vibrational frequencies of 2-amino-5-phenyl-1,3,4-thiadiazole (C8H7N3S) in the ground state has been calculated using the Hartree-Fock and density functional method (B3LYP) with 6-31G(d) basis set. The optimized geometric bond lengths and bond angles obtained by using HF and DFT (B3LYP) show the best agreement with the experimental data. Comparison of the observed fundamental vibrational frequencies of 2-amino-5-phenyl-1,3,4-thiadiazole (C8H7N3S) and calculated results by density functional B3LYP and Hartree-Fock methods indicate that B3LYP is superior to the scaled Hartree-Fock approach for molecular vibrational problems.
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Affiliation(s)
- Y Atalay
- Sakarya University, Faculty of Arts and Sciences, Department of Physics, Sakarya, Turkey
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