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Zdaniauskienė A, Charkova T, Ignatjev I, Melvydas V, Garjonytė R, Matulaitienė I, Talaikis M, Niaura G. Shell-isolated nanoparticle-enhanced Raman spectroscopy for characterization of living yeast cells. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2020; 240:118560. [PMID: 32526402 DOI: 10.1016/j.saa.2020.118560] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/09/2020] [Revised: 05/25/2020] [Accepted: 05/25/2020] [Indexed: 05/13/2023]
Abstract
Studying the biochemistry of yeast cells has enabled scientists to understand many essential cellular processes in human cells. Further development of biotechnological and medical progress requires revealing surface chemistry in living cells by using a non-destructive and molecular structure sensitive technique. In this study shell-isolated nanoparticle-enhanced Raman spectroscopy (SHINERS) was applied for probing the molecular structure of Metschnikowia pulcherrima yeast cells. Important function of studied cells is the ability to eliminate iron from growth media by precipitating the insoluble pigment pulcherrimin. Comparative SERS and SHINERS analysis of the yeast cells in combination with bare Au and shell-isolated Au@SiO2 nanoparticles were performed. It was observed that additional bands, such as adenine ring-related vibrational modes appear due to interaction with bare Au nanoparticles; the registered spectra do not coincide with the spectra where Au@SiO2 nanoparticles were used. SHINERS spectra of M. pulcherrima were significantly enhanced comparing to the Raman spectra. Based on first-principles calculations and 830-nm excited Raman analysis of pulcherrimin, the SHINERS signatures of iron pigment in yeast cells were revealed. Being protected from direct interaction of metal with adsorbate, Au@SiO2 nanoparticles yield reproducible and reliable vibrational signatures of yeast cell wall constituents.
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Affiliation(s)
- Agnė Zdaniauskienė
- Department of Organic Chemistry, Center for Physical Sciences and Technology (FTMC), Saulėtekio Ave. 3, LT-10257 Vilnius, Lithuania
| | - Tatjana Charkova
- Department of Organic Chemistry, Center for Physical Sciences and Technology (FTMC), Saulėtekio Ave. 3, LT-10257 Vilnius, Lithuania
| | - Ilja Ignatjev
- Department of Organic Chemistry, Center for Physical Sciences and Technology (FTMC), Saulėtekio Ave. 3, LT-10257 Vilnius, Lithuania
| | | | - Rasa Garjonytė
- Department of Organic Chemistry, Center for Physical Sciences and Technology (FTMC), Saulėtekio Ave. 3, LT-10257 Vilnius, Lithuania
| | - Ieva Matulaitienė
- Department of Organic Chemistry, Center for Physical Sciences and Technology (FTMC), Saulėtekio Ave. 3, LT-10257 Vilnius, Lithuania
| | - Martynas Talaikis
- Department of Bioelectrochemistry and Biospectroscopy, Institute of Biochemistry, Life Sciences Center, Vilnius University, Saulėtekio av. 7, LT-10257 Vilnius, Lithuania
| | - Gediminas Niaura
- Department of Organic Chemistry, Center for Physical Sciences and Technology (FTMC), Saulėtekio Ave. 3, LT-10257 Vilnius, Lithuania.
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Majeed SA. Combining microextraction methods with surface-enhanced Raman spectroscopy towards more selective and sensitive analyte detection by plasmonic metal nanoparticles. Analyst 2020; 145:6744-6752. [DOI: 10.1039/d0an01304h] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
Raman signals of analytes can be enhanced on the surface of noble nanoparticles by generating SERS signals, which can be further enhanced using microextraction (ME) techniques.
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Ozaki Y. Recent Advances in Molecular Spectroscopy of Electronic and Vibrational Transitions in Condensed Phase and Its Application to Chemistry. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2019. [DOI: 10.1246/bcsj.20180319] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Yukihiro Ozaki
- School of Science and Technology, Kwansei Gakuin University, Sanda, Hyogo 669-1337, Japan
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Membrane damage mechanism contributes to inhibition of trans-cinnamaldehyde on Penicillium italicum using Surface-Enhanced Raman Spectroscopy (SERS). Sci Rep 2019; 9:490. [PMID: 30679585 PMCID: PMC6345780 DOI: 10.1038/s41598-018-36989-7] [Citation(s) in RCA: 37] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2018] [Accepted: 11/30/2018] [Indexed: 01/18/2023] Open
Abstract
The antifungal mechanism of essential oils against fungi remains in the shallow study. In this paper, antifungal mechanism of trans-cinnamaldehyde against Penicillium italicum was explored. Trans-cinnamaldehyde exhibited strong mycelial growth inhibition against Penicillium italicum, with minimum inhibitory concentration of 0.313 μg/mL. Conventional analytical tests showed that trans-cinnamaldehyde changed the cell membrane permeability, which led to the leakage of some materials. Meanwhile, the membrane integrity and cell wall integrity also changed. Surface-enhanced Raman spectroscopy, an ultrasensitive and fingerprint method, was served as a bran-new method to study the antifungal mechanism. Characteristic peaks of supernatant obviously changed at 734, 1244, 1330, 1338 and 1466 cm-1. The Raman intensity represented a strong correlation with results from conventional methods, which made SERS an alternative to study antifungal process. All evidences implied that trans-cinnamaldehyde exerts its antifungal capacity against Penicillium italicum via membrane damage mechanism.
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Yu S, Liu Z, Wang W, Jin L, Xu W, Wu Y. Disperse magnetic solid phase microextraction and surface enhanced Raman scattering (Dis-MSPME-SERS) for the rapid detection of trace illegally chemicals. Talanta 2018; 178:498-506. [DOI: 10.1016/j.talanta.2017.09.054] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2017] [Revised: 09/14/2017] [Accepted: 09/17/2017] [Indexed: 12/25/2022]
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Uusitalo S, Popov A, Ryabchikov YV, Bibikova O, Alakomi HL, Juvonen R, Kontturi V, Siitonen S, Kabashin A, Meglinski I, Hiltunen J, Laitila A. Surface-enhanced Raman spectroscopy for identification and discrimination of beverage spoilage yeasts using patterned substrates and gold nanoparticles. J FOOD ENG 2017. [DOI: 10.1016/j.jfoodeng.2017.05.007] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Kitahama Y, Hayashi H, Itoh T, Ozaki Y. Measurement of pH-dependent surface-enhanced hyper-Raman scattering at desired positions on yeast cells via optical trapping. Analyst 2017; 142:3967-3974. [DOI: 10.1039/c7an00265c] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
At desired positions on yeast, pH-dependent surface-enhanced hyper-Raman scattering (SEHRS) spectra were recorded by focusing a near-infrared laser beam while silver nanoparticles (AgNPs) with 4-mercaptobenzoic acid (p-MBA) were simultaneously optically trapped.
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Affiliation(s)
- Yasutaka Kitahama
- Department of Chemistry
- School of Science and Technology
- Kwansei Gakuin University
- Sanda
- Japan
| | - Hiroaki Hayashi
- Department of Chemistry
- School of Science and Technology
- Kwansei Gakuin University
- Sanda
- Japan
| | - Tamitake Itoh
- Nano-Bioanalysis Research Group
- Health Research Institute
- National Institute of Advanced Industrial Science and Technology (AIST)
- Takamatsu
- Japan
| | - Yukihiro Ozaki
- Department of Chemistry
- School of Science and Technology
- Kwansei Gakuin University
- Sanda
- Japan
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Itoh T, Yamamoto YS. Recent topics on single-molecule fluctuation analysis using blinking in surface-enhanced resonance Raman scattering: clarification by the electromagnetic mechanism. Analyst 2016; 141:5000-9. [DOI: 10.1039/c6an00936k] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Abstract
Fluctuating single sp2carbon clusters at single hotspots of silver nanoparticle dimers investigated by surface-enhanced Raman scattering (SERS), indicating that SERS has become an ultrasensitive tool for clarifying molecular functions on plasmonic metal nanoparticles (NPs).
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Affiliation(s)
- Tamitake Itoh
- Nano-Bioanalysis Research Group
- Health Research Institute
- National Institute of Advanced Industrial Science and Technology (AIST)
- Takamatsu
- Japan
| | - Yuko S. Yamamoto
- Research Fellow of the Japan Society for the Promotion of Science
- Chiyoda
- Japan
- Department of Advanced Materials Sciences
- Faculty of Engineering
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Gold nanoprobes-based resonance Rayleigh scattering assay platform: Sensitive cytosensing of breast cancer cells and facile monitoring of folate receptor expression. Biosens Bioelectron 2015; 74:165-9. [DOI: 10.1016/j.bios.2015.06.012] [Citation(s) in RCA: 47] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2015] [Revised: 06/01/2015] [Accepted: 06/07/2015] [Indexed: 12/11/2022]
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Snopok B, Naumenko D, Serviene E, Bruzaite I, Stogrin A, Kulys J, Snitka V. Evanescent-field-induced Raman scattering for bio-friendly fingerprinting at sub-cellular dimension. Talanta 2014; 128:414-21. [PMID: 25059180 DOI: 10.1016/j.talanta.2014.04.015] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2014] [Revised: 04/02/2014] [Accepted: 04/05/2014] [Indexed: 10/25/2022]
Abstract
Evanescent field induced chemical imaging concept has been realized in analytical platform based on the µ-tip-enhanced Raman scattering spectroscopy (µ-TERS). The technique aimed to minimize thermal decomposition of dried biological sample as the result of huge concentration of optical field near the tip by increasing the size of an aperture-less "excitation source". µ-TERS technique is similar to classical biosensor systems based on propagating surface plasmon resonance phenomenon but with sensitive elements a few micrometers in size that can be targeted to the area of interest. The utility of the concept is exemplified by the analysis of dried single cell envelope of genetically modified Saccharomyces cerevisiae yeast cells, which do not have any heat-removing pathways, by water as in the case of the living cell. Practical excitation conditions effective for µ-TERS Raman observation of single layer dried biological samples without photodamage-related spectral distortion have been determined - the allowable limit is above 30s at 13 µW/µm(2). Finally, potential of µ-TERS spectroscopy as new bio-friendly instrumental platform for chemical fingerprinting and analytical characterization of buried nanoscale features is discussed.
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Affiliation(s)
- Boris Snopok
- Kaunas University of Technology, Research Centre for Microsystems and Nanotechnology, Studentu 65, 51369 Kaunas, Lithuania; Vilnius University, Institute of Biochemistry, Mokslininkų 12, 08662 Vilnius, Lithuania; V. Ye. Lashkaryov Institute of Semiconductor Physics, National Academy of Sciences of Ukraine, Prospekt Nauky, 41, Kyiv 03028, Ukraine
| | - Denys Naumenko
- Kaunas University of Technology, Research Centre for Microsystems and Nanotechnology, Studentu 65, 51369 Kaunas, Lithuania
| | - Elena Serviene
- Vilnius Gediminas Technical University, Department of Chemistry and Bioengineering, Sauletekio al. 11, LT-10223 Vilnius, Lithuania; Nature Research Centre, Akademijos 2, 08412 Vilnius, Lithuania
| | - Ingrida Bruzaite
- Vilnius Gediminas Technical University, Department of Chemistry and Bioengineering, Sauletekio al. 11, LT-10223 Vilnius, Lithuania
| | - Andrius Stogrin
- Kaunas University of Technology, Research Centre for Microsystems and Nanotechnology, Studentu 65, 51369 Kaunas, Lithuania
| | - Juozas Kulys
- Vilnius University, Institute of Biochemistry, Mokslininkų 12, 08662 Vilnius, Lithuania; Vilnius Gediminas Technical University, Department of Chemistry and Bioengineering, Sauletekio al. 11, LT-10223 Vilnius, Lithuania
| | - Valentinas Snitka
- Kaunas University of Technology, Research Centre for Microsystems and Nanotechnology, Studentu 65, 51369 Kaunas, Lithuania
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Volpati D, Aoki PHB, Alessio P, Pavinatto FJ, Miranda PB, Constantino CJL, Oliveira ON. Vibrational spectroscopy for probing molecular-level interactions in organic films mimicking biointerfaces. Adv Colloid Interface Sci 2014; 207:199-215. [PMID: 24530000 DOI: 10.1016/j.cis.2014.01.014] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2013] [Revised: 11/28/2013] [Accepted: 01/13/2014] [Indexed: 01/26/2023]
Abstract
Investigation into nanostructured organic films has served many purposes, including the design of functionalized surfaces that may be applied in biomedical devices and tissue engineering and for studying physiological processes depending on the interaction with cell membranes. Of particular relevance are Langmuir monolayers, Langmuir-Blodgett (LB) and layer-by-layer (LbL) films used to simulate biological interfaces. In this review, we shall focus on the use of vibrational spectroscopy methods to probe molecular-level interactions at biomimetic interfaces, with special emphasis on three surface-specific techniques, namely sum frequency generation (SFG), polarization-modulated infrared reflection absorption spectroscopy (PM-IRRAS) and surface-enhanced Raman scattering (SERS). The two types of systems selected for exemplifying the potential of the methods are the cell membrane models and the functionalized surfaces with biomolecules. Examples will be given on how SFG and PM-IRRAS can be combined to determine the effects from biomolecules on cell membrane models, which include determination of the orientation and preservation of secondary structure. Crucial information for the action of biomolecules on model membranes has also been obtained with PM-IRRAS, as is the case of chitosan removing proteins from the membrane. SERS will be shown as promising for enabling detection limits down to the single-molecule level. The strengths and limitations of these methods will also be discussed, in addition to the prospects for the near future.
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Affiliation(s)
- Diogo Volpati
- São Carlos Institute of Physics, University of São Paulo, CP 369, São Carlos, SP 13560-970, Brazil
| | - Pedro H B Aoki
- Faculty of Science and Technology, UNESP, Presidente Prudente, CEP 19060-900 SP,Brazil
| | - Priscila Alessio
- Faculty of Science and Technology, UNESP, Presidente Prudente, CEP 19060-900 SP,Brazil
| | - Felippe J Pavinatto
- São Carlos Institute of Physics, University of São Paulo, CP 369, São Carlos, SP 13560-970, Brazil
| | - Paulo B Miranda
- São Carlos Institute of Physics, University of São Paulo, CP 369, São Carlos, SP 13560-970, Brazil
| | | | - Osvaldo N Oliveira
- São Carlos Institute of Physics, University of São Paulo, CP 369, São Carlos, SP 13560-970, Brazil.
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12
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In situ SERS probing of nano-silver coated individual yeast cells. Biosens Bioelectron 2013; 49:536-41. [DOI: 10.1016/j.bios.2013.05.053] [Citation(s) in RCA: 45] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2013] [Revised: 05/20/2013] [Accepted: 05/30/2013] [Indexed: 01/05/2023]
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13
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Stender AS, Marchuk K, Liu C, Sander S, Meyer MW, Smith EA, Neupane B, Wang G, Li J, Cheng JX, Huang B, Fang N. Single cell optical imaging and spectroscopy. Chem Rev 2013; 113:2469-527. [PMID: 23410134 PMCID: PMC3624028 DOI: 10.1021/cr300336e] [Citation(s) in RCA: 166] [Impact Index Per Article: 15.1] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
- Anthony S. Stender
- Department of Chemistry, Iowa State University and Ames Laboratory, U. S. Department of Energy, Ames, IA 50011, USA
| | - Kyle Marchuk
- Department of Chemistry, Iowa State University and Ames Laboratory, U. S. Department of Energy, Ames, IA 50011, USA
| | - Chang Liu
- Department of Chemistry, Iowa State University and Ames Laboratory, U. S. Department of Energy, Ames, IA 50011, USA
| | - Suzanne Sander
- Department of Chemistry, Iowa State University and Ames Laboratory, U. S. Department of Energy, Ames, IA 50011, USA
| | - Matthew W. Meyer
- Department of Chemistry, Iowa State University and Ames Laboratory, U. S. Department of Energy, Ames, IA 50011, USA
| | - Emily A. Smith
- Department of Chemistry, Iowa State University and Ames Laboratory, U. S. Department of Energy, Ames, IA 50011, USA
| | - Bhanu Neupane
- Department of Chemistry, North Carolina State University, Raleigh, NC 27695, USA
| | - Gufeng Wang
- Department of Chemistry, North Carolina State University, Raleigh, NC 27695, USA
| | - Junjie Li
- Weldon School of Biomedical Engineering, Purdue University, West Lafayette, IN 47907
| | - Ji-Xin Cheng
- Weldon School of Biomedical Engineering, Purdue University, West Lafayette, IN 47907
| | - Bo Huang
- Department of Pharmaceutical Chemistry and Department of Biochemistry and Biophysics, University of California, San Francisco, CA 94158
| | - Ning Fang
- Department of Chemistry, Iowa State University and Ames Laboratory, U. S. Department of Energy, Ames, IA 50011, USA
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