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Procházka K, Limpouchová Z, Štěpánek M, Šindelka K, Lísal M. DPD Modelling of the Self- and Co-Assembly of Polymers and Polyelectrolytes in Aqueous Media: Impact on Polymer Science. Polymers (Basel) 2022; 14:404. [PMID: 35160394 PMCID: PMC8838752 DOI: 10.3390/polym14030404] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2021] [Revised: 01/17/2022] [Accepted: 01/18/2022] [Indexed: 02/04/2023] Open
Abstract
This review article is addressed to a broad community of polymer scientists. We outline and analyse the fundamentals of the dissipative particle dynamics (DPD) simulation method from the point of view of polymer physics and review the articles on polymer systems published in approximately the last two decades, focusing on their impact on macromolecular science. Special attention is devoted to polymer and polyelectrolyte self- and co-assembly and self-organisation and to the problems connected with the implementation of explicit electrostatics in DPD numerical machinery. Critical analysis of the results of a number of successful DPD studies of complex polymer systems published recently documents the importance and suitability of this coarse-grained method for studying polymer systems.
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Affiliation(s)
- Karel Procházka
- Department of Physical and Macromolecular Chemistry, Faculty of Science, Charles University, Hlavova 8, 128 43 Prague, Czech Republic; (Z.L.); (M.Š.)
| | - Zuzana Limpouchová
- Department of Physical and Macromolecular Chemistry, Faculty of Science, Charles University, Hlavova 8, 128 43 Prague, Czech Republic; (Z.L.); (M.Š.)
| | - Miroslav Štěpánek
- Department of Physical and Macromolecular Chemistry, Faculty of Science, Charles University, Hlavova 8, 128 43 Prague, Czech Republic; (Z.L.); (M.Š.)
| | - Karel Šindelka
- Department of Molecular and Mesoscopic Modelling, Institute of Chemical Process Fundamentals, Czech Academy of Sciences, Rozvojová 135, 165 02 Prague, Czech Republic; (K.Š.); (M.L.)
| | - Martin Lísal
- Department of Molecular and Mesoscopic Modelling, Institute of Chemical Process Fundamentals, Czech Academy of Sciences, Rozvojová 135, 165 02 Prague, Czech Republic; (K.Š.); (M.L.)
- Department of Physics, Faculty of Science, Jan Evangelista Purkyně University in Ústí nad Labem, Pasteurova 3632, 400 96 Ústí n. Labem, Czech Republic
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Šindelka K, Limpouchová Z, Procházka K. Solubilization of Charged Porphyrins in Interpolyelectrolyte Complexes: A Computer Study. Polymers (Basel) 2021; 13:502. [PMID: 33562022 PMCID: PMC7915837 DOI: 10.3390/polym13040502] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2021] [Revised: 01/29/2021] [Accepted: 02/03/2021] [Indexed: 11/21/2022] Open
Abstract
Using coarse-grained dissipative particle dynamics (DPD) with explicit electrostatics, we performed (i) an extensive series of simulations of the electrostatic co-assembly of asymmetric oppositely charged copolymers composed of one (either positively or negatively charged) polyelectrolyte (PE) block A and one water-soluble block B and (ii) studied the solubilization of positively charged porphyrin derivatives (P+) in the interpolyelectrolyte complex (IPEC) cores of co-assembled nanoparticles. We studied the stoichiometric mixtures of 137 A10+B25 and 137 A10-B25 chains with moderately hydrophobic A blocks (DPD interaction parameter aAS=35) and hydrophilic B blocks (aBS=25) with 10 to 120 P+ added (aPS=39). The P+ interactions with other components were set to match literature information on their limited solubility and aggregation behavior. The study shows that the moderately soluble P+ molecules easily solubilize in IPEC cores, where they partly replace PE+ and electrostatically crosslink PE- blocks. As the large P+ rings are apt to aggregate, P+ molecules aggregate in IPEC cores. The aggregation, which starts at very low loadings, is promoted by increasing the number of P+ in the mixture. The positively charged copolymers repelled from the central part of IPEC core partially concentrate at the core-shell interface and partially escape into bulk solvent depending on the amount of P+ in the mixture and on their association number, AS. If AS is lower than the ensemble average ⟨AS⟩n, the copolymer chains released from IPEC preferentially concentrate at the core-shell interface, thus increasing AS, which approaches ⟨AS⟩n. If AS>⟨AS⟩n, they escape into the bulk solvent.
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Affiliation(s)
- Karel Šindelka
- Department of Molecular and Mesoscopic Modelling, Czech Academy of Sciences, Institute of Chemical Process Fundamentals, Rozvojová 1, 165 02 Prague, Czech Republic;
| | - Zuzana Limpouchová
- Department of Physical Chemistry, Faculty of Science, Charles University, Hlavova 8, 128 00 Prague, Czech Republic;
| | - Karel Procházka
- Department of Physical Chemistry, Faculty of Science, Charles University, Hlavova 8, 128 00 Prague, Czech Republic;
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Raya RK, Štěpánek M, Limpouchová Z, Procházka K, Svoboda M, Lísal M, Pavlova E, Skandalis A, Pispas S. Onion Micelles with an Interpolyelectrolyte Complex Middle Layer: Experimental Motivation and Computer Study. Macromolecules 2020. [DOI: 10.1021/acs.macromol.0c00560] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Affiliation(s)
- Rahul Kumar Raya
- Department of Physical and Macromolecular Chemistry, Faculty of Science, Charles University in Prague, Hlavova 2030, 12840 Prague 2, Czech Republic
| | - Miroslav Štěpánek
- Department of Physical and Macromolecular Chemistry, Faculty of Science, Charles University in Prague, Hlavova 2030, 12840 Prague 2, Czech Republic
| | - Zuzana Limpouchová
- Department of Physical and Macromolecular Chemistry, Faculty of Science, Charles University in Prague, Hlavova 2030, 12840 Prague 2, Czech Republic
| | - Karel Procházka
- Department of Physical and Macromolecular Chemistry, Faculty of Science, Charles University in Prague, Hlavova 2030, 12840 Prague 2, Czech Republic
| | - Martin Svoboda
- Department of Physics, Faculty of Science, J. E. Purkinje University, České mládeže 8, 400 96 Ústí n. Lab., Czech Republic
- Department of Molecular and Mesoscopic Modelling, Institute of Chemical Process Fundamentals of the CAS, Rozvojová 135/1, 165 02 Prague 6, Suchdol, Czech Republic
| | - Martin Lísal
- Department of Physics, Faculty of Science, J. E. Purkinje University, České mládeže 8, 400 96 Ústí n. Lab., Czech Republic
- Department of Molecular and Mesoscopic Modelling, Institute of Chemical Process Fundamentals of the CAS, Rozvojová 135/1, 165 02 Prague 6, Suchdol, Czech Republic
| | - Ewa Pavlova
- Department of Polymer Morphology, Institute of Macromolecular Chemistry of the CAS, Heyrovský Square 2, 160 00 Prague 6, Czech Republic
| | - Athanasios Skandalis
- Theoretical & Physical Chemistry Institute, National Hellenic Research Foundation, 48 Vassileos Constantinou Avenue, 11635 Athens, Greece
| | - Stergios Pispas
- Theoretical & Physical Chemistry Institute, National Hellenic Research Foundation, 48 Vassileos Constantinou Avenue, 11635 Athens, Greece
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Lísal M, Šindelka K, Suchá L, Limpouchová Z, Procházka K. Dissipative particle dynamics simulations of polyelectrolyte self-assemblies. Methods with explicit electrostatics. POLYMER SCIENCE SERIES C 2017. [DOI: 10.1134/s1811238217010052] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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Wang X, Limpouchová Z, Procházka K. Computer study of chromatographic separation of mixtures of H-shaped and linear polymers in good and θ-solvents. POLYMER 2016. [DOI: 10.1016/j.polymer.2016.09.086] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Nowicki W, Nowicka G, Narkiewicz-Michałek J. Influence of confinement on conformational entropy of a polymer chain and structure of polymer–nanoparticles complexes. POLYMER 2009. [DOI: 10.1016/j.polymer.2009.02.044] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Jelínek K, Uhlík F, Limpouchová Z, Procházka K. Mean-Field Study of Poly(methacrylic acid) Shells in Partly Hydrophobically Modified Amphiphilic Block Copolymer Micelles in Polar Solvents. J Phys Chem B 2003. [DOI: 10.1021/jp0224463] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Karel Jelínek
- Department of Physical and Macromolecular Chemistry and Laboratory of Specialty Polymers, School of Science, Charles University in Prague, Albertov 6, 128 43 Prague 2, Czech Republic
| | - Filip Uhlík
- Department of Physical and Macromolecular Chemistry and Laboratory of Specialty Polymers, School of Science, Charles University in Prague, Albertov 6, 128 43 Prague 2, Czech Republic
| | - Zuzana Limpouchová
- Department of Physical and Macromolecular Chemistry and Laboratory of Specialty Polymers, School of Science, Charles University in Prague, Albertov 6, 128 43 Prague 2, Czech Republic
| | - Karel Procházka
- Department of Physical and Macromolecular Chemistry and Laboratory of Specialty Polymers, School of Science, Charles University in Prague, Albertov 6, 128 43 Prague 2, Czech Republic
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Štěpánek M, Humpolíčková J, Procházka K, Hof M, Tuzar Z, Špírková M, Wolff T. Light Scattering, Atomic Force Microscopy and Fluorescence Correlation Spectroscopy Studies of Polystyrene-block-poly(2-vinylpyridine)-block-poly(ethylene oxide) Micelles. ACTA ACUST UNITED AC 2003. [DOI: 10.1135/cccc20032120] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Polymeric nanoparticles formed by triblock copolymer polystyrene-block-poly(2-vinylpyridine)-block-poly(ethylene oxide), PS-PVP-PEO, in aqueous media were studied by a combination of fluorescence correlation spectroscopy with other fluorescence techniques, light scattering and atomic force microscopy. The studied polymeric nanoparticles exist in the form of (i) core/shell micelles in acid solution at pH lower than 4.8 and (ii) three-layer onion micelles at higher pH. Since water is a very strong precipitant for PS, both types of micelles have kinetically frozen spherical PS cores. The cores of micelles in acid media are surrounded by soluble shells formed by partly protonated PVP and PEO, while the cores of micelles in alkaline media are surrounded by compact insoluble layers of deprotonated PVP and soluble PEO shells. The micellization behavior of PS-PVP-PEO micelles is accompanied by secondary aggregation of micelles, which is provoked by stirring, shaking and also by filtration of micellar solutions. Therefore fluorescence correlation spectroscopy (FCS), which, in contrast to light scattering techniques, does not require filtration, was used as the main experimental technique for the characterization of non-aggregated micelles. The binding of a fluorescence probe, octadecylrhodamine B (ORB), to polymeric micelles, was studied before the FCS study of micelles.
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Uhlík F, Limpouchová Z, Matějíček P, Procházka K, Tuzar Z, Webber SE. Nonradiative Excitation Energy Transfer in Hydrophobically Modified Amphiphilic Block Copolymer Micelles. Theoretical Model and Monte Carlo Simulations,. Macromolecules 2002. [DOI: 10.1021/ma012073o] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Filip Uhlík
- Department of Physical and Macromolecular Chemistry & Laboratory of Specialty Polymers, School of Science, Charles University in Prague, Albertov 6, 128 43 Prague 2, Czech Republic
| | - Zuzana Limpouchová
- Department of Physical and Macromolecular Chemistry & Laboratory of Specialty Polymers, School of Science, Charles University in Prague, Albertov 6, 128 43 Prague 2, Czech Republic
| | - Pavel Matějíček
- Department of Physical and Macromolecular Chemistry & Laboratory of Specialty Polymers, School of Science, Charles University in Prague, Albertov 6, 128 43 Prague 2, Czech Republic
| | - Karel Procházka
- Department of Physical and Macromolecular Chemistry & Laboratory of Specialty Polymers, School of Science, Charles University in Prague, Albertov 6, 128 43 Prague 2, Czech Republic
| | - Zdeněk Tuzar
- Institute of Macromolecular Chemistry, Czech Academy of Sciences, Heyrovský Square 2, 162 06 Prague 6, Czech Republic
| | - Stephen E. Webber
- Department of Chemistry and Biochemistry, University of Texas at Austin, Austin, Texas 78712
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Matějíček P, Uhlík F, Limpouchová Z, Procházka K, Tuzar Z, Webber SE. Hydrophobically Modified Amphiphilic Block Copolymer Micelles in Non-Aqueous Polar Solvents. Fluorometric, Light Scattering and Computer-Based Monte Carlo Study. ACTA ACUST UNITED AC 2002. [DOI: 10.1135/cccc20020531] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
The micellization behavior of a hydrophobically modified polystyrene-block-poly(methacrylic acid) diblock copolymer, PS-N-PMA-A, tagged with naphthalene between blocks and with anthracene at the end of the PMA block, was studied in 1,4-dioxane-methanol mixtures by light scattering and fluorescence techniques. The behavior of a single-tagged sample, PS-N-PMA, and low-molar-mass analogues was studied for comparison. Methanol-rich mixtures with 1,4-dioxane are strong selective precipitants for PS. Multimolecular micelles with compact PS cores and PMA shells may be prepared indirectly by dialysis from 1,4-dioxane-rich mixtures, or by a slow titration of copolymer solutions in 1,4-dioxane-rich solvents with methanol under vigorous stirring. In tagged micelles, the naphthalene tag is trapped in nonpolar and fairly viscous core/shell interfacial region. In hydrophobically modified PS-N-PMA-A micelles, the hydrophobic anthracene at the ends of PMA blocks tends to avoid the bulk polar solvent and buries in the shell. The distribution of anthracene tags in the shell is a result of the enthalpy-to-entropy interplay. The measurements of direct nonradiative excitation energy transfer were performed to estimate the distribution of anthracene-tagged PMA ends in the shell. The experimental fluorometric data show that anthracene tags penetrate into the inner shell in methanol-rich solvents. Monte Carlo simulations were performed on model systems to get reference data for analysis of time-resolved fluorescence decay curves. A comparison of experimental and simulated decays indicates that hydrophobic traps return significantly deep into the shell (although not as deep as in aqueous media). The combined light scattering, fluorometric and computer simulation study shows that the conformational behavior of shell-forming PMA blocks in non-aqueous media is less affected by the presence of nonpolar traps than that in aqueous media.
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Viduna D, Limpouchová Z, Procházka K. Monte Carlo simulation of polymer brushes in narrow pores. J Chem Phys 2001. [DOI: 10.1063/1.1405444] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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