1
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Micheletti C, Chubak I, Orlandini E, Smrek J. Topology-Based Detection and Tracking of Deadlocks Reveal Aging of Active Ring Melts. ACS Macro Lett 2024:124-129. [PMID: 38198592 PMCID: PMC10883035 DOI: 10.1021/acsmacrolett.3c00567] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2024]
Abstract
Connecting the viscoelastic behavior of stressed ring melts to the various forms of entanglement that can emerge in such systems is still an open challenge. Here, we consider active ring melts, where stress is generated internally, and introduce a topology-based method to detect and track consequential forms of ring entanglements, namely, deadlocks. We demonstrate that, as stress accumulates, more and more rings are co-opted in a growing web of deadlocks that entrap many other rings by threading, bringing the system to a standstill. The method ought to help the study of topological aging in more general polymer contexts.
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Affiliation(s)
- Cristian Micheletti
- Scuola Internazionale Superiore di Studi Avanzati (SISSA), Via Bonomea 265, I-34136 Trieste, Italy
| | - Iurii Chubak
- Sorbonne Université CNRS, Physico-Chimie des électrolytes et Nanosystèmes Interfaciaux, F-75005 Paris, France
| | - Enzo Orlandini
- Università degli studi di Padova, Dipartimento di Fisica "G. Galilei", Via Marzolo 8, I-35100 Padova, Italy
| | - Jan Smrek
- Faculty of Physics, University of Vienna, Boltzmanngasse 5, A-1090 Vienna, Austria
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2
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Ghosh S, Vemparala S, Chaudhuri P. Onset of glassiness in two-dimensional ring polymers: Interplay of stiffness and crowding. J Chem Phys 2024; 160:014906. [PMID: 38180251 DOI: 10.1063/5.0160097] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2023] [Accepted: 11/26/2023] [Indexed: 01/06/2024] Open
Abstract
The effect of ring stiffness and pressure on the glassy dynamics of a thermal assembly of two-dimensional ring polymers is investigated using extensive coarse-grained molecular dynamics simulations. In all cases, dynamical slowing down is observed with increasing pressure, and thereby, a phase space for equilibrium dynamics is identified in the plane of the obtained monomer density and ring stiffness. When the rings are highly flexible, i.e., have low ring stiffness, glassiness sets in via the crowding of crumpled polymers, which take on a globular form. In contrast, at large ring stiffness, when the rings tend to have large asphericity under compaction, we observe the emergence of local domains having orientational ordering at high pressures. Therefore, our simulations highlight how varying the deformability of rings leads to contrasting mechanisms in driving the system toward the glassy regime.
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Affiliation(s)
- Sayantan Ghosh
- The Institute of Mathematical Sciences, C.I.T. Campus, Taramani, Chennai 600113, India
- Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai 400094, India
| | - Satyavani Vemparala
- The Institute of Mathematical Sciences, C.I.T. Campus, Taramani, Chennai 600113, India
- Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai 400094, India
| | - Pinaki Chaudhuri
- The Institute of Mathematical Sciences, C.I.T. Campus, Taramani, Chennai 600113, India
- Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai 400094, India
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3
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Goto S, Kim K, Matubayasi N. Unraveling the Glass-like Dynamic Heterogeneity in Ring Polymer Melts: From Semiflexible to Stiff Chain. ACS POLYMERS AU 2023; 3:437-446. [PMID: 38107414 PMCID: PMC10722566 DOI: 10.1021/acspolymersau.3c00013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/24/2023] [Revised: 08/08/2023] [Accepted: 08/08/2023] [Indexed: 12/19/2023]
Abstract
Ring polymers are an intriguing class of polymers with unique physical properties, and understanding their behavior is important for developing accurate theoretical models. In this study, we investigate the effect of chain stiffness and monomer density on the static and dynamic behaviors of ring polymer melts using molecular dynamics simulations. Our first focus is on the non-Gaussian parameter of center-of-mass displacement as a measure of dynamic heterogeneity, which is commonly observed in glass-forming liquids. We find that the non-Gaussianity in the displacement distribution increases with the monomer density and stiffness of the polymer chains, suggesting that excluded volume interactions between centers of mass have a strong effect on the dynamics of ring polymers. We then analyze the relationship between the radius of gyration and monomer density for semiflexible and stiff ring polymers. Our results indicate that the relationship between the two varies with chain stiffness, which can be attributed to the competition between repulsive forces inside the ring and from adjacent rings. Finally, we study the dynamics of bond-breakage virtually connected between the centers of mass of rings to analyze the exchanges of intermolecular networks of bonds. Our results demonstrate that the dynamic heterogeneity of bond-breakage is coupled with the non-Gaussianity in ring polymer melts, highlighting the importance of the bond-breaking method in determining the intermolecular dynamics of ring polymer melts. Overall, our study sheds light on the factors that govern the dynamic behaviors of ring polymers.
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Affiliation(s)
- Shota Goto
- Division of Chemical Engineering, Department
of Materials Engineering Science, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
| | - Kang Kim
- Division of Chemical Engineering, Department
of Materials Engineering Science, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
| | - Nobuyuki Matubayasi
- Division of Chemical Engineering, Department
of Materials Engineering Science, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
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4
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Sposini V, Likos CN, Camargo M. Glassy phases of the Gaussian core model. SOFT MATTER 2023. [PMID: 38050434 DOI: 10.1039/d3sm01314f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/06/2023]
Abstract
We present results from molecular dynamics simulations exploring the supercooled dynamics of the Gaussian Core Model in the low- and intermediate-density regimes. In particular, we analyse the transition from the low-density hard-sphere-like glassy dynamics to the high-density one. The dynamics at low densities is well described by the caging mechanism, giving rise to intermittent dynamics. At high densities, the particles undergo a more continuous motion in which the concept of cage loses its meaning. We elaborate on the idea that these different supercooled dynamics are in fact the precursors of two different glass states.
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Affiliation(s)
- Vittoria Sposini
- Faculty of Physics, University of Vienna, Boltzmanngasse 5, 1090 Vienna, Austria.
| | - Christos N Likos
- Faculty of Physics, University of Vienna, Boltzmanngasse 5, 1090 Vienna, Austria.
| | - Manuel Camargo
- Facultad de Ciencias & CICBA, Universidad Antonio Nariño-Campus Farallones, Km 18 via Cali-Jamundí, 760030 Cali, Colombia
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5
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Staňo R, Smrek J, Likos CN. Cluster Formation in Solutions of Polyelectrolyte Rings. ACS NANO 2023; 17:21369-21382. [PMID: 37729077 PMCID: PMC10655244 DOI: 10.1021/acsnano.3c06083] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/04/2023] [Accepted: 09/13/2023] [Indexed: 09/22/2023]
Abstract
We use molecular dynamics simulations to explore concentrated solutions of semiflexible polyelectrolyte ring polymers, akin to the DNA mini-circles, with counterions of different valences. We find that the assembly of rings into nanoscopic cylindrical stacks is a generic feature of the systems, but the morphology and dynamics of such a cluster can be steered by the counterion conditions. In general, a small addition of trivalent ions can stabilize the emergence of clusters due to the counterion condensation, which mitigates the repulsion between the like-charged rings. Stoichiometric addition of trivalent ions can even lead to phase separation of the polyelectrolyte ring phase due to the ion-bridging effects promoting otherwise entropically driven clustering. On the other hand, monovalent counterions cause the formation of stacks to be re-entrant with density. The clusters are stable within a certain window of concentration, while above the window the polyelectrolytes undergo an osmotic collapse, disfavoring ordering. The cluster phase exhibits characteristic cluster glass dynamics with arrest of collective degrees of freedom but not the self-ones. On the other hand, the collapsed phase shows arrest on both the collective and single level, suggesting an incipient glass-to-glass transition, from a cluster glass of ring clusters to a simple glass of rings.
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Affiliation(s)
- Roman Staňo
- Faculty
of Physics, University of Vienna, Boltzmanngasse 5, 1090 Vienna, Austria
- Vienna
Doctoral School in Physics, University of
Vienna, Boltzmanngasse
5, 1090 Vienna, Austria
| | - Jan Smrek
- Faculty
of Physics, University of Vienna, Boltzmanngasse 5, 1090 Vienna, Austria
| | - Christos N. Likos
- Faculty
of Physics, University of Vienna, Boltzmanngasse 5, 1090 Vienna, Austria
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6
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Li J, Zhang B, Li Y. Glass Formation in Mechanically Interlocked Ring Polymers: The Role of Induced Chain Stiffness. Macromolecules 2023. [DOI: 10.1021/acs.macromol.2c01368] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Affiliation(s)
- Jian Li
- Department of Physics and Electronic Engineering, Heze University, Heze274015, China
| | - Bokai Zhang
- School of Physical Science and Technology, Southwest University, Chongqing400715, China
- Department of Physics, Zhejiang Sci-Tech University, Hangzhou310018, China
| | - Yushan Li
- Department of Physics and Electronic Engineering, Heze University, Heze274015, China
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7
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Staňo R, Likos CN, Smrek J. To thread or not to thread? Effective potentials and threading interactions between asymmetric ring polymers. SOFT MATTER 2022; 19:17-30. [PMID: 36477247 PMCID: PMC9768673 DOI: 10.1039/d2sm01177h] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/31/2022] [Accepted: 11/22/2022] [Indexed: 06/17/2023]
Abstract
We use computer simulations to study a system of two unlinked ring polymers, whose length and bending stiffness are systematically varied. We derive the effective potentials between the rings, calculate the areas of minimal surfaces of the same, and characterize the threading between them. When the two rings are of the same kind, threading of a one ring through the surface of the other is immanent for small ring-ring separations. Flexible rings pierce the surface of the other ring several times but only shallowly, as compared to the stiff rings which pierce less frequently but deeply. Typically, the ring that is being threaded swells and flattens up into an oblate-like conformation, while the ring that is threading the other takes a shape of an elongated prolate. The roles of the threader and the threaded ring are being dynamically exchanged. If, on the other hand, the rings are of different kinds, the symmetry is broken and the rings tend to take up roles of the threader and the threaded ring with unequal probabilities. We propose a method how to predict these probabilities based on the parameters of the individual rings. Ultimately, our work captures the interactions between ring polymers in a coarse-grained fashion, opening the way to large-scale modelling of materials such as kinetoplasts, catenanes or topological brushes.
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Affiliation(s)
- Roman Staňo
- Faculty of Physics, University of Vienna, Boltzmanngasse 5, 1090 Vienna, Austria.
- Vienna Doctoral School in Physics, University of Vienna, Boltzmanngasse 5, 1090 Vienna, Austria
| | - Christos N Likos
- Faculty of Physics, University of Vienna, Boltzmanngasse 5, 1090 Vienna, Austria.
| | - Jan Smrek
- Faculty of Physics, University of Vienna, Boltzmanngasse 5, 1090 Vienna, Austria.
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8
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Hagita K, Murashima T, Sakata N, Shimokawa K, Deguchi T, Uehara E, Fujiwara S. Molecular Dynamics of Topological Barriers on the Crystallization Behavior of Ring Polyethylene Melts with Trefoil Knots. Macromolecules 2022. [DOI: 10.1021/acs.macromol.2c01843] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Katsumi Hagita
- Department of Applied Physics, National Defense Academy, 1-10-20, Hashirimizu, Yokosuka239-8686, Japan
| | - Takahiro Murashima
- Department of Physics, Tohoku University, 6-3, Aramaki-aza-Aoba, Aoba-ku, Sendai980-8578, Japan
| | - Naoki Sakata
- Department of Mathematics, Saitama University, 255, Shimo-Okubo, Sakura-ku, Saitama338-8570, Japan
- Department of Physics, Ochanomizu University, 2-1-1, Otsuka, Bunkyo-ku, Tokyo112-8610, Japan
| | - Koya Shimokawa
- Department of Mathematics, Saitama University, 255, Shimo-Okubo, Sakura-ku, Saitama338-8570, Japan
- Department of Mathematics, Ochanomizu University, 2-1-1, Otsuka, Bunkyo-ku, Tokyo112-8610, Japan
| | - Tetsuo Deguchi
- Department of Physics, Ochanomizu University, 2-1-1, Otsuka, Bunkyo-ku, Tokyo112-8610, Japan
| | - Erica Uehara
- Department of Physics, Ochanomizu University, 2-1-1, Otsuka, Bunkyo-ku, Tokyo112-8610, Japan
| | - Susumu Fujiwara
- Faculty of Materials Science and Engineering, Kyoto Institute of Technology, Matsugasaki,
Sakyo-ku, Kyoto606-8585, Japan
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9
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Roy PK, Chaudhuri P, Vemparala S. Effect of ring stiffness and ambient pressure on the dynamical slowdown in ring polymers. SOFT MATTER 2022; 18:2959-2967. [PMID: 35348146 DOI: 10.1039/d1sm01754c] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Using extensive molecular dynamics simulations, we investigate the slowdown of dynamics in a 3D system of ring polymers by varying the ambient pressure and the stiffness of the rings. Our study demonstrates that the stiffness of the rings determines the dynamics of the ring polymers, leading to glassiness at lower pressures for stiffer rings. The threading of the ring polymers, a unique feature that emerges only due to the topological nature of such polymers in three dimensions, is shown to be the determinant feature of dynamical slowdown, albeit only in a certain stiffness range. Our results suggest a possible framework for exploring the phase space spanned by ring stiffness and pressure to obtain spontaneously emerging topologically constrained polymer glasses.
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Affiliation(s)
- Projesh Kumar Roy
- The Institute of Mathematical Sciences, C. I. T. Campus, Taramani, Chennai 600113, India.
- Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai 400094, India
| | - Pinaki Chaudhuri
- The Institute of Mathematical Sciences, C. I. T. Campus, Taramani, Chennai 600113, India.
- Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai 400094, India
| | - Satyavani Vemparala
- The Institute of Mathematical Sciences, C. I. T. Campus, Taramani, Chennai 600113, India.
- Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai 400094, India
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10
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Bakhshandeh A, Segala M, Escobar Colla T. Equilibrium Conformations and Surface Charge Regulation of Spherical Polymer Brushes in Stretched Regimes. Macromolecules 2021. [DOI: 10.1021/acs.macromol.1c02077] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Affiliation(s)
- Amin Bakhshandeh
- Instituto de Física, Universidade Federal do Rio Grande do Sul, 91501-970 Porto Alegre, Rio Grande do Sul, Brazil
- Departamento de Físico-Química, Instituto de Química, Universidade Federal do Rio Grande do Sul, 91501-970 Porto Alegre, Rio Grande do Sul, Brazil
| | - Maximiliano Segala
- Instituto de Física, Universidade Federal de Ouro Preto, 35400-000 Ouro Preto, Minas Gerais, Brazil
- Departamento de Físico-Química, Instituto de Química, Universidade Federal do Rio Grande do Sul, 91501-970 Porto Alegre, Rio Grande do Sul, Brazil
| | - Thiago Escobar Colla
- Instituto de Física, Universidade Federal de Ouro Preto, 35400-000 Ouro Preto, Minas Gerais, Brazil
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11
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Moghimi E, Chubak I, Founta D, Ntetsikas K, Polymeropoulos G, Hadjichristidis N, Likos CN, Vlassopoulos D. The influence of arm composition on the self-assembly of low-functionality telechelic star polymers in dilute solutions. Colloid Polym Sci 2021. [DOI: 10.1007/s00396-020-04742-0] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
AbstractWe combine synthesis, physical experiments, and computer simulations to investigate self-assembly patterns of low-functionality telechelic star polymers (TSPs) in dilute solutions. In particular, in this work, we focus on the effect of the arm composition and length on the static and dynamic properties of TSPs, whose terminal blocks are subject to worsening solvent quality upon reducing the temperature. We find two populations, single stars and clusters, that emerge upon worsening the solvent quality of the outer block. For both types of populations, their spatial extent decreases with temperature, with the specific details (such as temperature at which the minimal size is reached) depending on the coupling between inter- and intra-molecular associations as well as their strength. The experimental results are in very good qualitative agreement with coarse-grained simulations, which offer insights into the mechanism of thermoresponsive behavior of this class of materials.
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12
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Tan J, Afify ND, Ferreiro-Rangel CA, Fan X, Sweatman MB. Cluster formation in symmetric binary SALR mixtures. J Chem Phys 2021; 154:074504. [PMID: 33607890 DOI: 10.1063/5.0036046] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023] Open
Abstract
The equilibrium cluster fluid state of a symmetric binary mixture of particles interacting through short-ranged attractive and long-ranged repulsive interactions is investigated through Monte Carlo simulations. We find that the clustering behavior of this system is controlled by the cross-interaction between the two types of particles. For a weak cross-attraction, the system displays a behavior that is a composite of the behavior of individual components, i.e., the two components can both form giant clusters independently and the clusters distribute evenly in the system. For a strong cross-attraction, we instead find that the resulting clusters are mixtures of both components. Between these limits, both components can form relatively pure clusters, but unlike clusters can join at their surfaces to form composite clusters. These insights should help to understand the mechanisms for clustering in experimental binary mixture systems and help tailor the properties of novel nanomaterials.
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Affiliation(s)
- Jiazheng Tan
- School of Engineering, The University of Edinburgh, The King's Buildings, Sanderson Building, Mayfield Road, Edinburgh EH9 3JL, United Kingdom
| | - Nasser D Afify
- School of Engineering, The University of Edinburgh, The King's Buildings, Sanderson Building, Mayfield Road, Edinburgh EH9 3JL, United Kingdom
| | - Carlos A Ferreiro-Rangel
- School of Engineering, The University of Edinburgh, The King's Buildings, Sanderson Building, Mayfield Road, Edinburgh EH9 3JL, United Kingdom
| | - Xianfeng Fan
- School of Engineering, The University of Edinburgh, The King's Buildings, Sanderson Building, Mayfield Road, Edinburgh EH9 3JL, United Kingdom
| | - Martin B Sweatman
- School of Engineering, The University of Edinburgh, The King's Buildings, Sanderson Building, Mayfield Road, Edinburgh EH9 3JL, United Kingdom
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13
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Liebetreu M, Likos CN. Cluster prevalence in concentrated ring-chain mixtures under shear. SOFT MATTER 2020; 16:8710-8719. [PMID: 32996544 DOI: 10.1039/d0sm01309a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Semiflexible ring polymers are known to exhibit clustering behavior and form stacks in concentrated solutions. Recently, weak shear was suggested to re-orient these stacks with flow, a phenomenon more easily visible in more concentrated solutions [Liebetreu et al., ACS Appl. Polym. Mater., 2020, 2(8), 3505-3517, DOI: 10.1021/acsapm.0c00522]. In this work, we investigate the impact of mixing linear chains and rings in a similar system under shear, studying clustering in the presence of semiflexible, rod-like chains. We present a correlation between chain monomer fraction and clustering behavior as linear chains take up less space, thus decreasing the system's effective density and, subsequently, clustering. However, we suggest mixtures with a low chain concentration to maintain or potentially enhance clustering at equilibrium while this effect is destroyed under shear. The mixing of chains and rings may therefore be used to create more strongly organized structures susceptible to reorientation via weak shear.
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Affiliation(s)
- Maximilian Liebetreu
- Faculty of Physics, University of Vienna, Boltzmanngasse 5, 1090 Vienna, Austria.
| | - Christos N Likos
- Faculty of Physics, University of Vienna, Boltzmanngasse 5, 1090 Vienna, Austria.
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14
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Zhou X, Guo F, Li K, He L, Zhang L. Entropy-induced Separation of Binary Semiflexible Ring Polymer Mixtures in Spherical Confinement. Polymers (Basel) 2019; 11:E1992. [PMID: 31810347 PMCID: PMC6960585 DOI: 10.3390/polym11121992] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2019] [Revised: 11/24/2019] [Accepted: 11/27/2019] [Indexed: 11/25/2022] Open
Abstract
Coarse-grained molecular dynamics simulations are used to investigate the conformations of binary semiflexible ring polymers (SRPs) of two different lengths confined in a hard sphere. Segregated structures of SRPs in binary mixtures are strongly dependent upon the number density of system (ρ), the bending energy of long SRPs (Kb, long), and the chain length ratio of long to short SRPs (α). With a low ρ or a weak Kb, long at a small ratio α, long SRPs are immersed randomly in the matrix of short SRPs. As ρ and bending energy of long SRPs (Kb, long) are increased up to a certain value for a large ratio α, a nearly complete segregation between long and short SRPs is observed, which can be further characterized by the ratio of tangential and radial components of long SRPs velocity. These explicit segregated structures of the two components in spherical confinement are induced by a delicate competition between the entropic excluded volume (depletion) effects and bending contributions.
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Affiliation(s)
- Xiaolin Zhou
- Department of Physics, Zhejiang University, Hangzhou 310027, Zhejiang, China; (X.Z.); (F.G.); (K.L.)
| | - Fuchen Guo
- Department of Physics, Zhejiang University, Hangzhou 310027, Zhejiang, China; (X.Z.); (F.G.); (K.L.)
| | - Ke Li
- Department of Physics, Zhejiang University, Hangzhou 310027, Zhejiang, China; (X.Z.); (F.G.); (K.L.)
| | - Linli He
- Department of Physics, Wenzhou University, Wenzhou 325035, Zhejiang, China
| | - Linxi Zhang
- Department of Physics, Zhejiang University, Hangzhou 310027, Zhejiang, China; (X.Z.); (F.G.); (K.L.)
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15
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Gruziel-Słomka M, Kondratiuk P, Szymczak P, Ekiel-Jeżewska ML. Stokesian dynamics of sedimenting elastic rings. SOFT MATTER 2019; 15:7262-7274. [PMID: 31486465 DOI: 10.1039/c9sm00598f] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
We consider elastic microfilaments which form closed loops. We investigate how the loops change shape and orientation while settling under gravity in a viscous fluid. Loops are circular at the equilibrium. Their dynamics are investigated numerically based on the Stokes equations for the fluid motion and the bead-spring model of the microfilament. The Rotne-Prager approximation for the bead mobility is used. We demonstrate that the relevant dimensionless parameter is the ratio of the bending resistance of the filament to the gravitation force corrected for buoyancy. The inverse of this ratio, called the elasto-gravitation number B, is widely used in the literature for sedimenting elastic linear filaments. We assume that B is of the order of 104-106, which corresponds to easily deformable loops. We find out that initially tilted circles evolve towards different sedimentation modes, depending on B. Very stiff or stiff rings attain almost planar, oval shapes, which are vertical or tilted, respectively. More flexible loops deform significantly and converge towards one of several characteristic periodic motions. These sedimentation modes are also detected when starting from various shapes, and for different loop lengths. In general, multi-stability is observed: an elastic ring converges to one of several sedimentation modes, depending on the initial conditions. This effect is pronounced for very elastic loops. The surprising diversity of long-lasting periodic motions and shapes of elastic rings found in this work gives a new perspective for the dynamics of more complex deformable objects at micrometer and nanometer scales, sedimenting under gravity or rotating in a centrifuge, such as red blood cells, ring polymers or circular DNA.
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Affiliation(s)
- Magdalena Gruziel-Słomka
- Institute of Fundamental Technological Research, Polish Academy of Sciences, Paw-ińskiego 5B, 02-106, Warsaw, Poland.
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16
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Liu Y, Liu G, Zhang W, Du C, Wesdemiotis C, Cheng SZD. Cooperative Soft-Cluster Glass in Giant Molecular Clusters. Macromolecules 2019. [DOI: 10.1021/acs.macromol.9b00549] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- Yuchu Liu
- Center for Advanced Low-Dimension Materials, State Key Laboratory for Modification of Chemical Fibers and Polymer Materials, College of Material Science and Engineering, Donghua University, Shanghai 201620, China
- South China Advanced Institute for Soft Matter Science and Technology, School of Molecular Science and Engineering, South China University of Technology, Guangzhou 510640, China
- College of Polymer Science and Polymer Engineering, Department of Polymer Science, The University of Akron, Akron, Ohio 44325, United States
| | - GengXin Liu
- Center for Advanced Low-Dimension Materials, State Key Laboratory for Modification of Chemical Fibers and Polymer Materials, College of Material Science and Engineering, Donghua University, Shanghai 201620, China
| | - Wei Zhang
- South China Advanced Institute for Soft Matter Science and Technology, School of Molecular Science and Engineering, South China University of Technology, Guangzhou 510640, China
| | - Chen Du
- South China Advanced Institute for Soft Matter Science and Technology, School of Molecular Science and Engineering, South China University of Technology, Guangzhou 510640, China
| | - Chrys Wesdemiotis
- South China Advanced Institute for Soft Matter Science and Technology, School of Molecular Science and Engineering, South China University of Technology, Guangzhou 510640, China
| | - Stephen Z. D. Cheng
- Center for Advanced Low-Dimension Materials, State Key Laboratory for Modification of Chemical Fibers and Polymer Materials, College of Material Science and Engineering, Donghua University, Shanghai 201620, China
- South China Advanced Institute for Soft Matter Science and Technology, School of Molecular Science and Engineering, South China University of Technology, Guangzhou 510640, China
- College of Polymer Science and Polymer Engineering, Department of Polymer Science, The University of Akron, Akron, Ohio 44325, United States
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17
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Miyazaki R, Kawasaki T, Miyazaki K. Slow dynamics coupled with cluster formation in ultrasoft-potential glasses. J Chem Phys 2019; 150:074503. [PMID: 30795681 DOI: 10.1063/1.5086379] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
We numerically investigate the slow dynamics of a binary mixture of ultrasoft particles interacting with the generalized Hertzian potential. If the softness parameter, α, is small, the particles at high densities start penetrating each other, form clusters, and eventually undergo the glass transition. We find multiple cluster-glass phases characterized by a different number of particles per cluster, whose boundary lines are sharply separated by the cluster size. Anomalous logarithmic slow relaxation of the density correlation functions is observed in the vicinity of these glass-glass phase boundaries, which hints the existence of the higher-order dynamical singularities predicted by the mode-coupling theory. Deeply in the cluster glass phases, it is found that the dynamics of a single particle is decoupled from that of the collective fluctuations.
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18
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Zhou X, Liu L, Chen J, Zhang L. Unusual conformations of semiflexible ring polymers confined in two parallel surfaces. POLYMER 2018. [DOI: 10.1016/j.polymer.2018.10.039] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
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19
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Chremos A, Douglas JF. A comparative study of thermodynamic, conformational, and structural properties of bottlebrush with star and ring polymer melts. J Chem Phys 2018; 149:044904. [PMID: 30068167 PMCID: PMC11446256 DOI: 10.1063/1.5034794] [Citation(s) in RCA: 41] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023] Open
Abstract
Thermodynamic, conformational, and structural properties of bottlebrush polymer melts are investigated with molecular dynamics simulations and compared to linear, regular star, and unknotted ring polymer melts to gauge the influence of molecular topology on polymer melt properties. We focus on the variation of the backbone chain length, the grafting density along the backbone, and the length of the side chains at different temperatures above the melt glass transition temperature. Based on these comparisons, we find that the segmental density, isothermal compressibility, and isobaric thermal expansion of bottlebrush melts are quantitatively similar to unknotted ring polymer melts and star polymer melts having a moderate number ( f = 5 to 6) of arms. These similarities extend to the mass scaling of the chain radius of gyration. Our results together indicate that the configurational properties of bottlebrush polymers in their melt state are more similar to randomly branched polymers than linear polymer chains. We also find that the average shape of bottlebrush polymers having short backbone chains with respect to the side chain length is also rather similar to the unknotted ring and moderately branched star polymers in their melt state. As a general trend, the molecular shape of bottlebrush polymers becomes more spherically symmetric when the length of the side chains has a commensurate length as the backbone chain. Finally, we calculate the partial static structure factor of the backbone segments and we find the emergence of a peak at the length scales that characterizes the average distance between the backbone chains. This peak is absent when we calculate the full static structure factor. We characterize the scaling of this peak with parameters characterizing the bottlebrush molecular architecture to aid in the experimental characterization of these molecules by neutron scattering.
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Affiliation(s)
- Alexandros Chremos
- Materials Science and Engineering Division, National Institute of Standards and Technology, Gaithersburg, MD
| | - Jack F. Douglas
- Materials Science and Engineering Division, National Institute of Standards and Technology, Gaithersburg, MD
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20
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Baumketner A, Stelmakh A, Cai W. Cluster Crystals Stabilized by Hydrophobic and Electrostatic Interactions. J Phys Chem B 2018; 122:2669-2682. [PMID: 29432018 DOI: 10.1021/acs.jpcb.7b11662] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Abstract
Cluster crystals are crystalline materials in which each site is occupied by multiple identical particles, atoms, colloids, or polymers. There are two classes of systems that make cluster crystals. One is composed of particles that interact via potentials that are bound at the origin and thus are able to penetrate each other. The other consists of non-interpenetrating particles whose interaction potential diverges at the origin. The goal of this work is to find which systems of the second class can make cluster crystals that are stable at room temperature. First, the general properties of the required potentials are established using an analytical model and Monte Carlo simulations. Next, we ask how such potentials can be constructed by combining hydrophobic attraction and electrostatic repulsion. A colloid model with a hard-sphere core and a repulsive wall is introduced to mimic the hydrophobic interaction. Charge is added to create long-range repulsion. A search in the parameter space of the colloid size, counterion type, and charge configuration uncovers several models for which effective colloid-colloid interaction, determined in explicit solvent as a potential of mean force, has the necessary shape. For the effective potential, cluster crystals are confirmed as low free-energy configurations in replica-exchange molecular dynamics simulations, which also generate the respective transition temperature. The model that exhibits a transition above room temperature is further studied in explicit solvent. Simulations on a 10 ns time scale show that crystalline conformations are stable below the target temperature but disintegrate rapidly above it, supporting the idea that hydrophobic and electrostatic interactions are sufficient to induce an assembly of cluster crystals. Finally, we discuss which physical systems are good candidates for experimental observations of cluster crystals.
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Affiliation(s)
- A Baumketner
- Institute for Condensed Matter Physics , NAS of Ukraine , 1 Svientsistsky Street , Lviv 79011 , Ukraine
| | - A Stelmakh
- Department of Chemistry , Ivan Franko Lviv National University , 6 Kyrylo and Mefodii Street , Lviv 79005 , Ukraine
| | - W Cai
- Department of Mathematics , Southern Methodist University , Dallas , Texas 75252 , United States
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21
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Douglas JF. Weak and Strong Gels and the Emergence of the Amorphous Solid State. Gels 2018; 4:E19. [PMID: 30674795 PMCID: PMC6318627 DOI: 10.3390/gels4010019] [Citation(s) in RCA: 36] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2017] [Revised: 02/14/2018] [Accepted: 02/17/2018] [Indexed: 01/03/2023] Open
Abstract
Gels are amorphous solids whose macroscopic viscoelastic response derives from constraints in the material that serve to localize the constituent molecules or particles about their average positions in space. These constraints may either be local in nature, as in chemical cross-linking and direct physical associations, or non-local, as in case of topological "entanglement" interactions between highly extended fiber or sheet structures in the fluid. Either of these interactions, or both combined, can lead to "gelation" or "amorphous solidification". While gels are often considered to be inherently non-equilibrium materials, and correspondingly termed "soft glassy matter", this is not generally the case. For example, the formation of vulcanized rubbers by cross-linking macromolecules can be exactly described as a second order phase transition from an equilibrium fluid to an equilibrium solid state, and amorphous solidification also arises in diverse physical gels in which molecular and particle localization occurs predominantly through transient molecuar associations, or even topological interactions. As equilibrium, or near equilibrium systems, such gels can be expected to exhibit universal linear and non-linear viscoelastic properties, especially near the "critical" conditions at which the gel state first emerges. In particular, a power-law viscoelastic response is frequently observed in gel materials near their "gelation" or "amorphous solidification" transition. Another basic property of physical gels of both theoretical and practical interest is their response to large stresses at constant shear rate or under a fixed macrocopic strain. In particular, these materials are often quite sensitive to applied stresses that can cause the self-assembled structure to progressively break down under flow or deformation. This disintegration of gel structure can lead to "yield" of the gel material, i.e., a fluidization transition, followed by shear thinning of the resulting heterogeneous "jelly-like" fluid. When the stress is removed, however, the material can relax back to its former equilibrium gel state, i.e., gel rejuvenation. In constrast, a non-equilibrium material will simply change its form and properties in a way that depends on processing history. Physical gels are thus unique self-healing materials in which the existence of equilibrium ensures their eventual recovery. The existence of equilibrium also has implications for the nature of both the linear and non-linear rheological response of gel materials, and the present paper explores this phenomenon based on simple scaling arguments of the kind frequently used in describing phase transitions and the properties of polymer solutions.
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Affiliation(s)
- Jack F Douglas
- Materials Science and Engineering Division, National Institute of Standards and Technology, Gaithersburg, MD 20899, USA.
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22
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23
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Zhou X, Jiang Y, Deng Z, Zhang L. Glassy dynamics of nanoparticles in semiflexible ring polymer nanocomposite melts. Sci Rep 2017; 7:44325. [PMID: 28290546 PMCID: PMC5349566 DOI: 10.1038/srep44325] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2016] [Accepted: 02/06/2017] [Indexed: 12/03/2022] Open
Abstract
By employing molecular dynamics simulations, we explore the dynamics of NPs in semiflexible ring polymer nanocomposite melts. A novel glass transition is observed for NPs in semiflexible ring polymer melts as the bending energy (Kb) of ring polymers increases. For NPs in flexible ring polymer melts (Kb = 0), NPs move in the classic diffusive behavior. However, for NPs in semiflexible ring polymer melts with large bending energy, NPs diffuse very slowly and exhibit the glassy state in which the NPs are all irreversibly caged be the neighbouring semiflexible ring polymers. This glass transition occurs well above the classical glass transition temperature at which microscopic mobility is lost, and the topological interactions of semiflexible ring polymers play an important role in this non-classical glass transition. This investigation can help us understand the nature of the glass transition in polymer systems.
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Affiliation(s)
- Xiaolin Zhou
- Department of Physics, Zhejiang University, Hangzhou, 310027, China
| | - Yangwei Jiang
- Department of Physics, Zhejiang University, Hangzhou, 310027, China
| | - Zhenyu Deng
- Department of Physics, Zhejiang University, Hangzhou, 310027, China
| | - Linxi Zhang
- Department of Physics, Zhejiang University, Hangzhou, 310027, China
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24
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Coil-helix-globule transition for self-attractive semiflexible ring chains. POLYMER 2017. [DOI: 10.1016/j.polymer.2016.12.075] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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25
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Du P, Li A, Li X, Zhang Y, Do C, He L, Rick SW, John VT, Kumar R, Zhang D. Aggregation of cyclic polypeptoids bearing zwitterionic end-groups with attractive dipole–dipole and solvophobic interactions: a study by small-angle neutron scattering and molecular dynamics simulation. Phys Chem Chem Phys 2017; 19:14388-14400. [DOI: 10.1039/c7cp01602f] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The aggregation behavior of cyclic polypeptoids has been studied using experiments and simulations.
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Affiliation(s)
- Pu Du
- Department of Chemistry and Macromolecular Studies Group
- Louisiana State University
- Baton Rouge
- USA
| | - Ang Li
- Department of Chemistry and Macromolecular Studies Group
- Louisiana State University
- Baton Rouge
- USA
| | - Xin Li
- Department of Chemistry and Macromolecular Studies Group
- Louisiana State University
- Baton Rouge
- USA
| | - Yueheng Zhang
- Department of Chemical and Biomolecular Engineering
- Tulane University
- New Orleans
- USA
| | - Changwoo Do
- Biology and Soft Matter Division
- Neutron Sciences Directorate
- Oak Ridge National Laboratory
- Oak Ridge
- USA
| | - Lilin He
- Biology and Soft Matter Division
- Neutron Sciences Directorate
- Oak Ridge National Laboratory
- Oak Ridge
- USA
| | - Steven W. Rick
- Department of Chemistry
- University of New Orleans
- New Orleans
- USA
| | - Vijay T. John
- Department of Chemical and Biomolecular Engineering
- Tulane University
- New Orleans
- USA
| | - Revati Kumar
- Department of Chemistry and Macromolecular Studies Group
- Louisiana State University
- Baton Rouge
- USA
| | - Donghui Zhang
- Department of Chemistry and Macromolecular Studies Group
- Louisiana State University
- Baton Rouge
- USA
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26
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Chremos A, Douglas JF. Self-assembly of polymer-grafted nanoparticles in solvent-free conditions. SOFT MATTER 2016; 12:9527-9537. [PMID: 27841418 PMCID: PMC5341081 DOI: 10.1039/c6sm02063a] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
Grafting of polymer chains onto the surface of spherical nanoparticles leads to a hybrid type of fluid that exhibits properties of both particle suspensions and melts of star polymers-these properties being controlled by the relative dimensions of the grafted polymer chains to the nanoparticle diameter, D, and the number of the number of chains grafted on the nanoparticle surface, f. While polymer-grafted nanoparticles (GNP) of this kind typically have a spherical average shape after grafting even a moderate number of chains, their instantaneous molecular shape can fluctuate significantly due to the deformation of the grafted chains. Both simulations and measurements have previously revealed that these "conformationally polarizable" particles can exhibit self-assembly into large scale polymeric structures in both solution and in polymer melts, and we simulate polymer-grafted nanoparticles with D and temperature (T) variations without a dispersing solvent to better understand the nature of this self-assembly process. We observe a reversible self-assembly into linear and branched dynamic GNP structures, where the extent of the assembly and geometry depend on D and T, and we constructed a map capturing the GNP structural behavior with D and T variations. Since the shape of the GNPs appeared to be correlated with the occurrence of the GNP self-assembly, we quantified the average shape and a measure of shape fluctuations to better understand how molecular shape influences their propensity to self-assemble into different structural forms. Based on this framework, we describe the clustering process of the GNPs as an equilibrium polymerization phenomenon and we calculate the order parameter governing the dynamic clustering behavior of GNPs, the average mass of the clusters, size distribution, and the apparent fractal dimension of the clusters.
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Affiliation(s)
- Alexandros Chremos
- Materials Science and Engineering Division, National Institute of Standards and Technology, Gaithersburg, Maryland 20899, USA.
| | - Jack F Douglas
- Materials Science and Engineering Division, National Institute of Standards and Technology, Gaithersburg, Maryland 20899, USA.
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27
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Miyazaki R, Kawasaki T, Miyazaki K. Cluster Glass Transition of Ultrasoft-Potential Fluids at High Density. PHYSICAL REVIEW LETTERS 2016; 117:165701. [PMID: 27792362 DOI: 10.1103/physrevlett.117.165701] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/19/2016] [Indexed: 06/06/2023]
Abstract
Using molecular dynamics simulation, we investigate the slow dynamics of a supercooled binary mixture of soft particles interacting with a generalized Hertzian potential. At low density, it displays typical slow dynamics near its glass transition temperature. At higher densities, particles bond together, forming clusters, and the clusters undergo the glass transition. The number of particles in a cluster increases one by one as the density increases. We demonstrate that there exist multiple cluster-glass phases characterized by a different number of particles per cluster, each of which is separated by distinct minima. Surprisingly, a so-called higher order singularity of the mode-coupling theory signaled by a logarithmic relaxation is observed in the vicinity of the boundaries between monomer and cluster glass phases. The system also exhibits rich and anomalous dynamics in the cluster glass phases, such as the decoupling of the self- and collective dynamics.
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Affiliation(s)
- Ryoji Miyazaki
- Department of Physics, Nagoya University, Nagoya 464-8602, Japan
| | - Takeshi Kawasaki
- Department of Physics, Nagoya University, Nagoya 464-8602, Japan
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28
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Poier P, Egorov SA, Likos CN, Blaak R. Concentration-induced planar-to-homeotropic anchoring transition of stiff ring polymers on hard walls. SOFT MATTER 2016; 12:7983-7994. [PMID: 27714380 DOI: 10.1039/c6sm01453d] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
We study the structure and interfacial ordering of stiff ring polymers close to repulsive walls. For this purpose, we employ an anisotropic effective model in which the rings are pictured as soft, penetrable discs [P. Poier, C. N. Likos, A. J. Moreno and R. Blaak, Macromolecules, 2015, 48, 4983]. We have studied this model in the bulk and in the presence of a wall, employing Density Functional Theory and computer simulations. While the Ornstein-Zernike equation in combination with the Hypernetted Chain Approximation gives results that are in quantitative agreement with computer simulations, a simple Mean Field approximation strongly overestimates the interaction between the effective particles in the bulk. We discover that by increasing density one can induce a reorientation of the effective rings in the vicinity of a wall, which prefer to orient themselves parallel to the surface (face-on or planar) for low densities ρ and reorient orthogonal to the wall (edge-on or homeotropic) for higher values of ρ. This transition in the surface-structure can be observed in both computer simulations, as well as in an appropriate density functional theory. We trace its physical origin in the penetrable character of the rings, which allows for a reduction of the surface tension contribution due to ring-ring interactions upon the emergence of homeotropic ordering on the wall and increasing the density of the system.
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Affiliation(s)
- Peter Poier
- Faculty of Physics, University of Vienna, Boltzmanngasse 5, A-1090, Vienna, Austria.
| | - Sergei A Egorov
- Department of Chemistry, University of Virgina, McCormick Road, P.O. Box 400319, Charlottesville, VA, USA and Erwin Schrödinger International Institute for Mathematics and Physics, University of Vienna, Boltzmanngasse 9, A-1090 Vienna, Austria
| | - Christos N Likos
- Faculty of Physics, University of Vienna, Boltzmanngasse 5, A-1090, Vienna, Austria. and Erwin Schrödinger International Institute for Mathematics and Physics, University of Vienna, Boltzmanngasse 9, A-1090 Vienna, Austria
| | - Ronald Blaak
- Faculty of Physics, University of Vienna, Boltzmanngasse 5, A-1090, Vienna, Austria.
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29
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Abstract
In order to quantify the effect of mutual threading on conformations and dynamics of unconcatenated and unknotted rings in the melt we computationally examine their minimal surfaces. We found a linear scaling of the surface area with the ring length. Minimal surfaces allow for an unambiguous algorithmic definition of mutual threading between rings. Based on it, we found that, although ring threading is frequent, majority of cases correspond to short loops. These findings explain why approximate theories that neglect threading are so unexpectedly successful despite having no small parameter justification. We also examine threading dynamics and identify the threading order parameter that reflects the ring diffusivity.
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Affiliation(s)
- Jan Smrek
- Center
for Soft Matter Research
and Department of Physics, New York University, New York, New York 10003, United States
| | - Alexander Y. Grosberg
- Center
for Soft Matter Research
and Department of Physics, New York University, New York, New York 10003, United States
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30
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Poier P, Bačová P, Moreno AJ, Likos CN, Blaak R. Anisotropic effective interactions and stack formation in mixtures of semiflexible ring polymers. SOFT MATTER 2016; 12:4805-4820. [PMID: 27117080 DOI: 10.1039/c6sm00430j] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
By means of extensive computer simulations, we investigate the formation of columnar structures (stacks) in concentrated solutions of semiflexible ring polymers. To characterize the stacks we employ an algorithm that identifies tube-like structures in the simulation cell. Stacks are found both in the real system and in the fluid of soft disks interacting through the effective anisotropic pair potential derived for the rings [P. Poier et al., Macromolecules, 2015, 48, 4983-4997]. Furthermore, we investigate binary mixtures of cluster-forming and non-cluster-forming rings. We find that monodispersity is not a requirement for stack formation. The latter is found for a broad range of mixture compositions, though the columns in the mixtures exhibit important differences to those observed in the monodisperse case. We extend the anisotropic effective model to mixtures. We show that it correctly predicts stack formation and constitutes a significant improvement with respect to the usual isotropic effective description based only on macromolecular centers-of-mass.
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Affiliation(s)
- Peter Poier
- Faculty of Physics, University of Vienna, Boltzmanngasse 5, A-1090, Vienna, Austria.
| | - Petra Bačová
- Centro de Física de Materiales (CSIC-UPV/EHU) and Materials Physics Center MPC, Paseo Manuel de Lardizabal 5, E-20018 San Sebastián, Spain and Institute of Applied and Computational Mathematics (IACM), Foundation for Research and Technology Hellas (FORTH), GR-71110 Heraklion, Greece
| | - Angel J Moreno
- Centro de Física de Materiales (CSIC-UPV/EHU) and Materials Physics Center MPC, Paseo Manuel de Lardizabal 5, E-20018 San Sebastián, Spain and Donostia International Physics Center, Paseo Manuel de Lardizabal 4, E-20018 San Sebastián, Spain
| | - Christos N Likos
- Faculty of Physics, University of Vienna, Boltzmanngasse 5, A-1090, Vienna, Austria.
| | - Ronald Blaak
- Faculty of Physics, University of Vienna, Boltzmanngasse 5, A-1090, Vienna, Austria.
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31
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Yamamoto T, Tezuka Y. Cyclic polymers revealing topology effects upon self-assemblies, dynamics and responses. SOFT MATTER 2015; 11:7458-7468. [PMID: 26264187 DOI: 10.1039/c5sm01557j] [Citation(s) in RCA: 99] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
A variety of single- and multicyclic polymers having programmed chemical structures with guaranteed purity have now become obtainable owing to a number of synthetic breakthroughs achieved in recent years. Accordingly, a broadening range of studies has been undertaken to gain updated insights on fundamental polymer properties of cyclic polymers in either solution or bulk, in either static or dynamic states, and in self-assemblies, leading to unusual properties and functions of polymer materials based on their cyclic topologies. In this article, we review recent studies aiming to achieve distinctive properties and functions by cyclic polymers unattainable by their linear or branched counterparts. We focus, in particular, on selected examples of unprecedented topology effects of cyclic polymers upon self-assemblies, dynamics and responses, to highlight current progress in Topological Polymer Chemistry.
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Affiliation(s)
- Takuya Yamamoto
- Department of Organic and Polymeric Materials, Graduate School of Science and Engineering, Tokyo Institute of Technology, Tokyo, 152-8552, Japan.
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32
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Ye X, Zhou Z, Nie Y, Ma P, Hao T, Yang W, Lu H. Comparative Study on Dynamical Heterogeneity of Ring and Linear Polymers. MACROMOL THEOR SIMUL 2015. [DOI: 10.1002/mats.201500042] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Xubo Ye
- School of Materials Science and Engineering; Jiangsu University; 301 Xuefu Road Zhenjiang 212013 China
| | - Zhiping Zhou
- School of Materials Science and Engineering; Jiangsu University; 301 Xuefu Road Zhenjiang 212013 China
| | - Yijing Nie
- School of Materials Science and Engineering; Jiangsu University; 301 Xuefu Road Zhenjiang 212013 China
| | - Ping Ma
- School of Materials Science and Engineering; Jiangsu University; 301 Xuefu Road Zhenjiang 212013 China
| | - Tongfan Hao
- School of Materials Science and Engineering; Jiangsu University; 301 Xuefu Road Zhenjiang 212013 China
| | - Wenming Yang
- School of Materials Science and Engineering; Jiangsu University; 301 Xuefu Road Zhenjiang 212013 China
| | - Haifeng Lu
- School of Materials Science and Engineering; Jiangsu University; 301 Xuefu Road Zhenjiang 212013 China
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33
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Poier P, Likos CN, Moreno A, Blaak R. An Anisotropic Effective Model for the Simulation of Semiflexible Ring Polymers. Macromolecules 2015; 48:4983-4997. [PMID: 26240439 PMCID: PMC4519991 DOI: 10.1021/acs.macromol.5b00603] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2015] [Revised: 05/29/2015] [Indexed: 01/27/2023]
Abstract
We derive and introduce anisotropic effective pair potentials to coarse-grain solutions of semiflexible ring polymers of various lengths. The system has been recently investigated by means of full monomer-resolved computer simulations, revealing a host of unusual features and structure formation, which, however, cannot be captured by a rotationally averaged effective pair potential between the rings' centers of mass [Bernabei M.; Soft Matter2013, 9, 1287]. Our new coarse-graining strategy is to picture each ring as a soft, penetrable disk. We demonstrate that for the short- and intermediate-length rings the new model is quite capable of capturing the physics in a quantitative fashion, whereas for the largest rings, which resemble flexible ones, it fails at high densities. Our work opens the way for the physical justification of general, anisotropic penetrable interaction potentials.
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Affiliation(s)
- Peter Poier
- Faculty
of Physics, University of Vienna, Boltzmanngasse 5, A-1090 Vienna, Austria
| | - Christos N. Likos
- Faculty
of Physics, University of Vienna, Boltzmanngasse 5, A-1090 Vienna, Austria
| | - Angel
J. Moreno
- Centro de Física
de Materiales (CSIC-UPV/EHU) and Materials Physics Center (MPC), Paseo Manuel de Lardizabal 5, E-20018 San Sebastián, Spain
- Donostia International
Physics Center, Paseo Manuel de Lardizabal
4, E-20018 San Sebastián, Spain
| | - Ronald Blaak
- Faculty
of Physics, University of Vienna, Boltzmanngasse 5, A-1090 Vienna, Austria
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34
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Narros A, Likos CN, Moreno AJ, Capone B. Multi-blob coarse graining for ring polymer solutions. SOFT MATTER 2014; 10:9601-9614. [PMID: 25356818 DOI: 10.1039/c4sm01904k] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
We present a multi-scale molecular modeling of concentrated solutions of unknotted and non-concatenated ring polymers under good solvent conditions. The approach is based on a multi-blob representation of each ring polymer, which is capable of overcoming the shortcomings of single-blob approaches that lose their validity at concentrations exceeding the overlap density of the solution [A. Narros, A. J. Moreno, and C. N. Likos, Soft Matter, 2010, 6, 2435]. By means of a first principles coarse-graining strategy based on analytically determined effective pair potentials between the blobs, computed at zero density, we quantitatively reproduce the single molecule and solution properties of a system with well-defined topological constraints. Detailed comparisons with the underlying, monomer-resolved model demonstrate the validity of our approach, which employs fully transferable pair potentials between connected and unconnected blobs. We demonstrate that the pair structure between the centers of mass of the rings is accurately reproduced by the multi-blob approach, thus opening the way for simulation of arbitrarily long polymers. Finally, we show the importance of the topological constraint of non-concatenation on the structure of the concentrated solution and in particular on the size of the correlation hole and the shrinkage of the rings as melt concentrations are approached.
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Affiliation(s)
- Arturo Narros
- Faculty of Physics, University of Vienna, Boltzmanngasse 5, A-1090, Vienna, Austria.
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