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Adam A, Mehrparvar S, Haberhauer G. An azobenzene container showing a definite folding - synthesis and structural investigation. Beilstein J Org Chem 2019; 15:1534-1544. [PMID: 31354872 PMCID: PMC6633880 DOI: 10.3762/bjoc.15.156] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2019] [Accepted: 06/25/2019] [Indexed: 12/21/2022] Open
Abstract
The combination of photo-switchable units with macrocycles is a very interesting field in supramolecular chemistry. Here, we present the synthesis of a foldable container consisting of two different types of Lissoclinum macrocyclic peptides which are connected via two azobenzene units. The container is controllable by light: irradiation with UV light causes a switching process to the compact cis,cis-isomer, whereas by the use of visible light the stretched trans,trans-isomer is formed. By means of quantum chemical calculations and CD spectroscopy we could show that the trans→cis isomerization is spatially directed; that means that one of the two different macrocycles performs a definite clockwise rotation to the other, caused by irradiation with UV light. For the cis→trans isomerization counterclockwise rotations are found. Furthermore, quantum chemical calculations reveal that the energy of the cis,cis-isomer is only slightly higher than the energy of the cis,trans-isomer. This effect can be explained by the high dispersion energy in the compact cis,cis-isomer.
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Affiliation(s)
- Abdulselam Adam
- Institut für Organische Chemie, Universität Duisburg-Essen, Universitätsstr. 7, D-45117 Essen, Germany
| | - Saber Mehrparvar
- Institut für Organische Chemie, Universität Duisburg-Essen, Universitätsstr. 7, D-45117 Essen, Germany
| | - Gebhard Haberhauer
- Institut für Organische Chemie, Universität Duisburg-Essen, Universitätsstr. 7, D-45117 Essen, Germany
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6
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Asano A, Minoura K, Yamada T, Doi M. Conformational transformation of ascidiacyclamide analogues induced by incorporating enantiomers of phenylalanine, 1-naphthylalanine or 2-naphthylalanine. J Pept Sci 2016; 22:156-65. [DOI: 10.1002/psc.2853] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2015] [Revised: 12/08/2015] [Accepted: 12/17/2015] [Indexed: 11/07/2022]
Affiliation(s)
- Akiko Asano
- Osaka University of Pharmaceutical Sciences; 4-20-1, Nasahara, Takatsuki Osaka 569-1094 Japan
| | - Katsuhiko Minoura
- Osaka University of Pharmaceutical Sciences; 4-20-1, Nasahara, Takatsuki Osaka 569-1094 Japan
| | - Takeshi Yamada
- Osaka University of Pharmaceutical Sciences; 4-20-1, Nasahara, Takatsuki Osaka 569-1094 Japan
| | - Mitsunobu Doi
- Osaka University of Pharmaceutical Sciences; 4-20-1, Nasahara, Takatsuki Osaka 569-1094 Japan
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8
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Nielsen DS, Hoang HN, Lohman RJ, Diness F, Fairlie DP. Total synthesis, structure, and oral absorption of a thiazole cyclic peptide, sanguinamide A. Org Lett 2012; 14:5720-3. [PMID: 23130644 DOI: 10.1021/ol3027347] [Citation(s) in RCA: 51] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The first total synthesis and three-dimensional solution structure are reported for sanguinamide A, a thiazole-containing cyclic peptide from the sea slug H. sanguineus. Solution phase fragment synthesis, solid phase fragment assembly, and solution macrocyclization were combined to give (1) in 10% yield. Spectral properties were identical for the natural product, requiring revision of its structure from (2) to (1). Intramolecular transannular hydrogen bonds help to bury polar atoms, which enables oral absorption from the gut.
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Affiliation(s)
- Daniel S Nielsen
- Division of Chemistry and Structural Biology, Institute for Molecular Bioscience, The University of Queensland, Brisbane, Qld 4072, Australia
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9
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Dong Y, Loong DT, Yuen AK, Black RJ, O'Malley S, Clegg JK, Lindoy LF, Jolliffe KA. Molecular capsules and coordination polymers from a backbone-modified cyclic peptide bearing pyridyl arms. Supramol Chem 2012. [DOI: 10.1080/10610278.2012.688128] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
Affiliation(s)
- Ying Dong
- a School of Chemistry, The University of Sydney , 2006 NSW , Australia
| | - David T.J. Loong
- a School of Chemistry, The University of Sydney , 2006 NSW , Australia
| | - Alex K.L. Yuen
- a School of Chemistry, The University of Sydney , 2006 NSW , Australia
| | - Richard J. Black
- a School of Chemistry, The University of Sydney , 2006 NSW , Australia
| | - Shane O'Malley
- a School of Chemistry, The University of Sydney , 2006 NSW , Australia
| | - Jack K. Clegg
- a School of Chemistry, The University of Sydney , 2006 NSW , Australia
| | - Leonard F. Lindoy
- a School of Chemistry, The University of Sydney , 2006 NSW , Australia
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14
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Beyer RL, Singh Y, Fairlie DP. Cyclooligomerization of a helix-bearing template into macrocycles bearing multiple helices. Org Lett 2008; 10:3481-4. [PMID: 18620416 DOI: 10.1021/ol801040c] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Cyclooligomerization was investigated for separating and spatially arranging helical peptides as discontinuous surfaces. Tetrapeptide H-[Ile-Ser-Lys(Ox)]-OH, containing a turn-inducing oxazole constraint, was connected through its lysine side chain via a beta-alanine linker to the C-terminus of a two-turn helical nonapeptide Ac-(cyclo-4,8)-LRL [KARAD](Aib). The resulting helix-appended template was self-condensed and cyclized to a library of macrocycles ( n = 2-6) containing multiple (2-6) helices. An NMR structure shows retention of alpha helicity in the cyclotrimer ( n = 3).
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Affiliation(s)
- Renée L Beyer
- Centre for Drug Design and Development, Institute for Molecular Bioscience, University of Queensland, Brisbane QLD 4072, Australia
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15
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Alfonso I, Bolte M, Bru M, Burguete MI, Luis SV, Rubio J. Supramolecular Control for the Modular Synthesis of Pseudopeptidic Macrocycles through an Anion-Templated Reaction. J Am Chem Soc 2008; 130:6137-44. [DOI: 10.1021/ja710132c] [Citation(s) in RCA: 91] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Ignacio Alfonso
- Departamento de Química Orgánica Biológica, Instituto de Investigaciones Químicas y Ambientales de Barcelona, Consejo Superior de Investigaciones Científicas (IIQAB-CSIC), Jordi Girona, 18-26, E-08034, Barcelona, Spain, Institut für Anorganische Chemie, J. W. Goethe-Universität Frankfurt, Max-von-Laue-Strasse 7, 60438, Frankfurt am Main, Germany, Departamento de Química Inorgánica y Orgánica, UAMOA, Universidad Jaume I/CSIC, Campus del Riu Sec, Avenida Sos Baynat, s/n, E-12071, Castellón, Spain
| | - Michael Bolte
- Departamento de Química Orgánica Biológica, Instituto de Investigaciones Químicas y Ambientales de Barcelona, Consejo Superior de Investigaciones Científicas (IIQAB-CSIC), Jordi Girona, 18-26, E-08034, Barcelona, Spain, Institut für Anorganische Chemie, J. W. Goethe-Universität Frankfurt, Max-von-Laue-Strasse 7, 60438, Frankfurt am Main, Germany, Departamento de Química Inorgánica y Orgánica, UAMOA, Universidad Jaume I/CSIC, Campus del Riu Sec, Avenida Sos Baynat, s/n, E-12071, Castellón, Spain
| | - Miriam Bru
- Departamento de Química Orgánica Biológica, Instituto de Investigaciones Químicas y Ambientales de Barcelona, Consejo Superior de Investigaciones Científicas (IIQAB-CSIC), Jordi Girona, 18-26, E-08034, Barcelona, Spain, Institut für Anorganische Chemie, J. W. Goethe-Universität Frankfurt, Max-von-Laue-Strasse 7, 60438, Frankfurt am Main, Germany, Departamento de Química Inorgánica y Orgánica, UAMOA, Universidad Jaume I/CSIC, Campus del Riu Sec, Avenida Sos Baynat, s/n, E-12071, Castellón, Spain
| | - M. Isabel Burguete
- Departamento de Química Orgánica Biológica, Instituto de Investigaciones Químicas y Ambientales de Barcelona, Consejo Superior de Investigaciones Científicas (IIQAB-CSIC), Jordi Girona, 18-26, E-08034, Barcelona, Spain, Institut für Anorganische Chemie, J. W. Goethe-Universität Frankfurt, Max-von-Laue-Strasse 7, 60438, Frankfurt am Main, Germany, Departamento de Química Inorgánica y Orgánica, UAMOA, Universidad Jaume I/CSIC, Campus del Riu Sec, Avenida Sos Baynat, s/n, E-12071, Castellón, Spain
| | - Santiago V. Luis
- Departamento de Química Orgánica Biológica, Instituto de Investigaciones Químicas y Ambientales de Barcelona, Consejo Superior de Investigaciones Científicas (IIQAB-CSIC), Jordi Girona, 18-26, E-08034, Barcelona, Spain, Institut für Anorganische Chemie, J. W. Goethe-Universität Frankfurt, Max-von-Laue-Strasse 7, 60438, Frankfurt am Main, Germany, Departamento de Química Inorgánica y Orgánica, UAMOA, Universidad Jaume I/CSIC, Campus del Riu Sec, Avenida Sos Baynat, s/n, E-12071, Castellón, Spain
| | - Jenifer Rubio
- Departamento de Química Orgánica Biológica, Instituto de Investigaciones Químicas y Ambientales de Barcelona, Consejo Superior de Investigaciones Científicas (IIQAB-CSIC), Jordi Girona, 18-26, E-08034, Barcelona, Spain, Institut für Anorganische Chemie, J. W. Goethe-Universität Frankfurt, Max-von-Laue-Strasse 7, 60438, Frankfurt am Main, Germany, Departamento de Química Inorgánica y Orgánica, UAMOA, Universidad Jaume I/CSIC, Campus del Riu Sec, Avenida Sos Baynat, s/n, E-12071, Castellón, Spain
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