Synthesis of a Triply-Bridged Molecular Gyroscope by a Directed Meridional Cyclization Strategy

Bulky selenium ligand stabilized trans-palladium dichloride complexes as catalyst for silver-free decarboxylative coupling of coumarin-3-carboxylic acids

This report describes synthesis of three new trans -palladium dichloride complexes of bulky selenium ligands. These complexes possess a Cl-Pd-Cl rotor spoke attached to a Se-Pd-Se axle. The new ligands and palladium complexes ( C1 - C3 ) were characterized with the help of NMR, HRMS, UV-Vis., IR, and elemental analysis. The single crystal structure of metal complex C2 confirmed a square planer geometry of complex with trans -orientation. The X-ray structure revealed intramolecular secondary interactions (SeCH---Cl) between chlorine of PdCl 2 and CH 2 proton of selenium ligand. Variable temperature NMR data shows coalescence of diastereotopic protons, which indicates pyramidal inversion of selenium atom at elevated temperature. The relaxed potential energy scan of C2 suggests a rotational barrier of ~12.5 kcal/mol for rotation of chlorine atom through Cl-Pd-Cl rotor. The complex C3 possess dual intramolecular secondary interactions (OCH 2 ---Cl and SeCH 2 ---Cl) with stator ligand. Molecular rotor C2 was found to be most efficient catalyst for the decarboxylative Heck-coupling under mild reaction conditions. The protocol is applicable to a broad range of substrates with large functional group tolerance and low catalyst loading (2.5 mol %). The mechanism of decarboxylative Heck-coupling reaction was investigated through experimental and computational studies. Importantly the reaction works under silver-free conditions which reduces the cost of overall protocol. Further, the catalyst also worked for decarboxylative arylation and decarboxylative Suzuki-Miyaura coupling reactions with good yields of the coupled products.

Synthesis and Surface Behaviour of NDI Chromophores Mounted on a Tripodal Scaffold: Towards Self-Decoupled Chromophores for Single-Molecule Electroluminescence

This paper reports the efficient synthesis, absorption and emission spectra, and the electrochemical properties of a series of 2,6-disubstituted naphthalene-1,4,5,8-tetracarboxdiimide (NDI) tripodal molecules with thioacetate anchors for their surface investigations. Our studies showed that, in particular, the pyrrolidinyl group with its strong electron-donating properties enhanced the fluorescence of such core-substituted NDI chromophores and caused a significant bathochromic shift in the absorption spectrum with a correspondingly narrowed bandgap of 1.94 eV. Cyclic voltammetry showed the redox properties of NDIs to be influenced by core substituents. The strong electron-donating character of pyrrolidine substituents results in rather high HOMO and LUMO levels of -5.31 and -3.37 eV when compared with the parental unsubstituted NDI. UHV-STM measurements of a sub-monolayer of the rigid tripodal NDI chromophores spray deposited on Au(111) show that these molecules mainly tend to adsorb flat in a pairwise fashion on the surface and form unordered films. However, the STML experiments also revealed a few molecular clusters, which might consist of upright oriented molecules protruding from the molecular island and show electroluminescence photon spectra with high electroluminescence yields of up to 6×10-3 . These results demonstrate the promising potential of the NDI tripodal chromophores for the fabrication of molecular devices profiting from optical features of the molecular layer.

Encapsulating N-Heterocyclic Carbene Binuclear Transition-Metal Complexes as a New Platform for Molecular Rotation in Crystalline Solid-State

In crystalline solids, molecules generally have limited mobility due to their densely packed environment. However, structural information at the molecular level may be used to design amphidynamic crystals with rotating elements linked to rigid, lattice-forming parts, which may lead to molecular rotary motions and changes in conformation that determine the physical properties of the solid-state materials. Here, we report a novel design of emissive crystalline molecular rotors with a central pyrazine rotator connected by implanted transition metals (Cu or Au) to a readily accessible enclosure formed by two N-heterocyclic carbenes (NHC) in discrete binuclear complexes. The activation energies for the rotation could be tuned by changing the implanted metal. Exchanging Cu to Au resulted in an ∼4.0 kcal/mol reduction in the rotational energy barrier as a result of lower steric demand by elongation of the axle with the noble metal, and a stronger electronic stabilization in the rotational transition state by enhancement of the d-π* interactions between the metal centers and the pyrazine rotator. The Cu(I) rotor complex showed a greater electronic delocalization than the Au(I) rotor complex, causing a red-shifted solid-state emission. Molecular rotation-induced emission quenching was observed in both crystals. The enclosing NHC rotors are easy to prepare, and their rotational motion should be less dependent on packing structures, which are often crucial for many previously documented amphidynamic molecular crystals. The platform from the encapsulating NHC cationic metal complexes and the metal-centered rotation-axis provide a promising scaffold for a novel design of crystalline molecular rotors, including manipulation of rotary dynamics and solid-state emission.

Molecular motion of halogenated ethylammonium/[18]crown-6 supramolecular ions in nickel dithiolate magnetic crystals

Supramolecular cations, consisting of ethylammonium derivatives (X–CH₂CH₂–NH₃⁺) complexed with [18]crown-6, were incorporated into [Ni(dmit)₂]⁻ crystals in order to promote molecular motion.

A selenium-coordinated palladium(ii) trans-dichloride molecular rotor as a catalyst for site-selective annulation of 2-arylimidazo[1,2-a]pyridines

This report describes the synthesis of a new class of secondary interaction (SeCHCl)-controlled molecular rotor having a Cl-Pd-Cl rotor spoke attached onto a Se-Pd-Se axle. NMR data acquired at various temperatures established ΔG/ΔG values of 15.5 and 17.2 kcal mol^-1 for a roughly 4.5 Å-long rotor. The molecular rotor showed excellent catalytic activity with reverse regioselectivity for annulation of 2-arylimidazo[1,2-a]pyridines (yields: ∼53-78%) with only 1.5 mol% catalyst loading.

Fluorophoric [2]rotaxanes: post-synthetic functionalization, conformational fluxionality and metal ion chelation

Fluorophoric [2]rotaxanes form an exciplex upon interpenetration and the exciplex signals are used to monitor the chelation properties of the interlocked systems.

Kinetic Stabilization of Carbazole Nitroxides by Inclusion in a Macrocage and Their Electron Spin Resonance Characterization

Some nitroxides, for example, tetramethylpyridiniumoxide, are known as stable radicals; however, carbazole nitroxide is less stable. The kinetic stabilization of labile radicals by introduction of bulky substituents is usually effective to investigate intrinsic properties of the molecule because of small electronic perturbation induced by the substituents. In this study, macrocage molecules with a carbazole nitroxide connected by covalent bonds were newly designed as kinetically stabilized carbazole nitroxides. The nitroxides were prepared and characterized by electron spin resonance spectroscopy. The caged nitroxides presented long half-lives (∼50 h) by kinetic analysis.

Vibrational spectroscopic characterization of cyclic and acyclic molecular rotors with 1,4-diethynylphenylene-d4 rotators

The synthesis and characterization of acyclic and cyclic molecular rotors with 1,4-diethynylphenylene-d₄ rotators are described. The ATR-FTIR and Raman spectra of acyclic rotor 3 and cyclic rotor 5E were measured and interpreted. A feature of ATR-FTIR spectrum of rotor 5E is a strong two-component band around 1730cm^-1 attributed to symmetric and asymmetric stretching vibration of the carbonyl group, while this is not observed in rotor 3. Raman investigation in the wide temperature range of 350 - 10K was carried out. The splitting of Raman bands in the region of stretching vibration of CC double and triple bonds at 170 and 260K for rotor 5E is observed. The splitting of bands is due to changes in molecular structure.

A crystalline molecular gyrotop with a biphenylene dirotor and its temperature-dependent birefringence

A crystalline molecular gyrotop with a biphenylene dirotor showed a reduction in the birefringence with increasing temperature.

Tuneable dynamics of a scandium nitride cluster inside an Ih-C80 cage

The internal clusters in metallofullerenes usually exhibit certain motion that is potentially usable in molecular gyroscopes and nano-machines. Based on (45)Sc NMR, the motion of the scandium nitride cluster within the C80 cage was investigated via varying the temperature and modifying the cage, and by changing the cluster size.

A pyrene-bridged macrocage showing no excimer fluorescence

A pyrene bridged macrocage shows fluorescence from a monomeric excited state without excimer due to cage effects.

Photochromic molecular gyroscope with solid state rotational states determined by an azobenzene bridge

We describe the synthesis, characterization, photochemical isomerization, and rotational dynamics of a crystalline molecular gyroscope containing an azobenzene bridge (trans-2) that spans from one end of the stator to other, with the intention of exploring its function as a molecular brake. While single crystal X-ray diffraction analysis of a photochemically inactive dichloromethane solvate was used to confirm the molecular and packing structures of trans-2, a nanocrystalline pseudopolymorph was shown to be photoactive, and it was analyzed by powder X-ray diffraction (PXRD), scanning electron microscopy, and variable temperature solid state (2)H NMR before and after photoisomerization. It was shown that the nanocrystalline suspension irradiated with λ = 340 nm reaches a photostationary state with 34% of cis-isomer, as compared to that observed in solution where the corresponding value is 74%. Line shape analysis of solid state (2)H NMR spectra of a phenylene-d4 isotopologue, obtained as a function of temperature, indicated that rotation in crystals of the trans-2 isomer, with a mean activation energy of 4.6 ± 0.6 kcal/mol and a pre-exponential factor exp(29.4 ± 1.7), is ten times faster than that of samples containing the cis-2 isomer, which has a higher mean activation energy of 5.1 ± 0.6 kcal/mol and a lower pre-exponential factor of exp(27.9 ± 1.3).

Ring-closing metathesis for the synthesis of a molecular gyrotop

A molecular gyrotop was synthesized by ring-closing metathesis (RCM) under reflux, indicating that the cage is a thermodynamically controlled product.

A crystalline molecular gyrotop with germanium junctions between a phenylene rotor and alkyl spokes

A molecular gyrotop with germanium junctions was synthesized, and the dynamics of the phenylene and the optical properties were discussed.

Thermal modulation of birefringence observed in a crystalline molecular gyrotop

Recently, functional organic materials have been put into practical use. The application of molecular motions has the potential to create new molecule-based materials. For this reason, considerable attention has been focused on the chemistry and properties of molecular machines in which mechanical motions of parts of the molecules are observed. In particular, phenylene rotation in the crystalline state has been investigated using framed molecular gyrotops having a phenylene rotor encased in three long alkyl spokes. In this study, we show thermal modulation of birefringence in a crystal due to the states of dynamic equilibrium of a novel molecular gyrotop. A macrocage molecule having a bridged phenylene rotor was synthesized as a novel molecular gyrotop. Rapid rotation of the phenylene rotor of the molecular gyrotop was confirmed by solid-state (2)H NMR spectroscopy that showed changes in the optical properties of a single crystal, i.e., the thermal modulation of birefringence. These results are the first application of the dynamic states in a crystal causing an optical change. These phenomena were also confirmed by control experiments using a molecular gyrotop with a nonrotating xylene rotor. We anticipate our finding to be a starting point for the creation of a new field of material chemistry that will make use of the dynamic states of molecules.

Chemistry of anthracene-acetylene oligomers XX: synthesis, structures, and self-association of anthracene-anthraquinone cyclic compounds with ethynylene linkers

We have synthesized anthracene-acetylene oligomers, which contained one 10-substituted anthracene unit and one anthraquinone unit, by cyclization with Sonogashira coupling. X-ray analysis revealed an almost-planar framework and significant out-of-plane deformation around the inner carbonyl moiety because of steric hindrance. These compounds underwent self-association in solution and their association constants for monomer-dimer exchange were determined by variable-concentration (1)H NMR measurements in CDCl(3): 8 mol(-1) L (10-substituent: isopropyl), <5 mol(-1) L (methoxy), and 19 mol(-1) L (octyloxy). These results were discussed on the basis of spectroscopic and molecular-orbital analysis. A linear molecular assembly of the octyloxy compound at a liquid/graphite interface was observed by STM measurements.

Dynamics of molecular rotors confined in two dimensions: transition from a 2D rotational glass to a 2D rotational fluid in a periodic mesoporous organosilica

The motional behavior of p-phenylene-d(4) rotators confined within the 2D layers of a hierarchically ordered periodic mesoporous p-divinylbenzenesilica has been elucidated to evaluate the effects of reduced dimensionality on the engineered dynamics of artificial molecular machines. The hybrid mesoporous material, characterized by a honeycomb lattice structure, has arrays of alternating p-divinylbenzene rotors and siloxane layers forming the molecularly ordered walls of the mesoscopic channels. The p-divinylbenzene rotors are strongly anchored between two adjacent siloxane sheets, so that the p-phenylene rotators are unable to experience translational diffusion and are allowed to rotate about only one fixed axis. Variable-temperature (2)H NMR experiments revealed that the p-phenylene rotators undergo an exchange process between sites related by 180° and a non-Arrhenius temperature dependence of the dynamics, with reorientational rates ranging from 10(3) to 10(8) Hz between 215 to 305 K. The regime of motion changes rapidly at about 280 K indicating the occurrence of a dynamical transition. The transition was also recognized by a steep change in the heat capacity at constant pressure. As a result of the robust lamellar architecture comprising the pore walls, the orientational dynamic disorder related to the phase transition is only realized in two dimensions within the layers, that is in the plane perpendicular to the channel axis. Thus, the aligned rotors that form the organic layers exhibit unique anisotropic dynamical properties as a result of the architecture's reduced dimensionality. The dynamical disorder restricted to two dimensions constitutes a highly mobile fluidlike rotational phase at room temperature, which upon cooling undergoes a transition to a more rigid glasslike phase. Activation energies of 5.9 and 9.5 kcal/mol respectively have been measured for the two dynamical regimes of rotation. Collectively, our investigation has led to the discovery of an orientationally disordered 2D rotational glass and its transition from rigid to soft at increasing temperature. The spectral narrowing observed in the (2)H NMR experiments at higher temperatures (310-420 K) is consistent with fast rotational dynamics, which remain anisotropic in nature within the robust lamellar architecture. This study suggests that exploiting reduced dimensionality in the design of solid-state artificial molecular machines and functional materials may yield access to behavior previously unrealized in 3D materials.

Multiple hindered rotators in a gyroscope-inspired tribenzylamine hemicryptophane

A gyroscope-inspired tribenzylamine hemicryptophane provides a vehicle for exploring the structure and properties of multiple p-phenylene rotators within one molecule. The hemicryptophane was synthesized in three steps in good overall yield using mild conditions. Three rotator-forming linkers were cyclized to form a rigid cyclotriveratrylene (CTV) stator framework, which was then closed with an amine. The gyroscope-like molecule was characterized by (1)H NMR and (13)C NMR spectroscopy, and the structure was solved by X-ray crystallography. The rigidity of the two-component CTV-trismethylamine stator was investigated by (1)H variable-temperature (VT) NMR experiments and molecular dynamics simulations. These techniques identified gyration of the three p-phenylene rotators on the millisecond time scale at -93 °C, with more dynamic but still hindered motion at room temperature (27 °C). The activation energy for the p-phenylene rotation was determined to be ~10 kcal mol(-1). Due to the propeller arrangement of the p-phenylenes, their rotation is hindered but not strongly correlated. The compact size, simple synthetic route, and molecular motions of this gyroscope-inspired tribenzylamine hemicryptophane make it an attractive starting point for controlling the direction and coupling of rotators within molecular systems.