1
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Shen SM, Appendino G, Guo YW. Pitfalls in the structural elucidation of small molecules. A critical analysis of a decade of structural misassignments of marine natural products. Nat Prod Rep 2022; 39:1803-1832. [PMID: 35770685 DOI: 10.1039/d2np00023g] [Citation(s) in RCA: 28] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Covering: July 2010 to August 2021This article summarizes more than 200 cases of misassigned marine natural products reported between July 2010 and August 2021, sorting out errors according to the structural elements. Based on a comparative analysis of the original and the revised structures, major pitfalls still plaguing the structural elucidation of small molecules were identified, emphasizing the role of total synthesis, crystallography, as well as chemical- and biosynthetic logic to complement spectroscopic data. Distinct "trends" in natural product misassignment are evident between compounds of marine and plant origin, with an overall much lower incidence of "impossible" structures within misassigned marine natural products.
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Affiliation(s)
- Shou-Mao Shen
- State Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China. .,School of Chinese Materia Medica, Nanjing University of Chinese Medicine, Nanjing 210023, China
| | - Giovanni Appendino
- Dipartimento di Scienze del Farmaco, Universitá degli Studi del Piemonte Orientale, Largo Donegani 2, 28100 Novara, Italy
| | - Yue-Wei Guo
- State Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China. .,Drug Discovery Shandong Laboratory, Bohai Rim Advanced Research Institute for Drug Discovery, Yantai, Shandong 264117, China
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2
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Lavinda O, Witt CH, Woerpel KA. Origin of High Diastereoselectivity in Reactions of Seven-Membered-Ring Enolates. Angew Chem Int Ed Engl 2022; 61:e202114183. [PMID: 35076978 PMCID: PMC8940697 DOI: 10.1002/anie.202114183] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2021] [Indexed: 11/10/2022]
Abstract
Unlike many reactions of their six-membered-ring counterparts, the reactions of chiral seven-membered-ring enolates are highly diastereoselective. Diastereoselectivity was observed for a range of substrates, including lactam, lactone, and cyclic ketone derivatives. The stereoselectivity arises from torsional and steric interactions that develop when electrophiles approach the diastereotopic π-faces of the enolates, which are distinguished by subtle differences in the orientation of nearby atoms of the ring.
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Affiliation(s)
- Olga Lavinda
- Department of Chemistry, New York University, 100 Washington Square East, New York, NY 10003, USA
| | - Collin H Witt
- Department of Chemistry, New York University, 100 Washington Square East, New York, NY 10003, USA
| | - K A Woerpel
- Department of Chemistry, New York University, 100 Washington Square East, New York, NY 10003, USA
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3
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Abstract
Covering: 2020This review covers the literature published in 2020 for marine natural products (MNPs), with 757 citations (747 for the period January to December 2020) referring to compounds isolated from marine microorganisms and phytoplankton, green, brown and red algae, sponges, cnidarians, bryozoans, molluscs, tunicates, echinoderms, mangroves and other intertidal plants and microorganisms. The emphasis is on new compounds (1407 in 420 papers for 2020), together with the relevant biological activities, source organisms and country of origin. Pertinent reviews, biosynthetic studies, first syntheses, and syntheses that led to the revision of structures or stereochemistries, have been included. A meta analysis of bioactivity data relating to new MNPs reported over the last five years is also presented.
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Affiliation(s)
- Anthony R Carroll
- School of Environment and Science, Griffith University, Gold Coast, Australia. .,Griffith Institute for Drug Discovery, Griffith University, Brisbane, Australia
| | - Brent R Copp
- School of Chemical Sciences, University of Auckland, Auckland, New Zealand
| | - Rohan A Davis
- Griffith Institute for Drug Discovery, Griffith University, Brisbane, Australia.,School of Enivironment and Science, Griffith University, Brisbane, Australia
| | - Robert A Keyzers
- Centre for Biodiscovery, School of Chemical and Physical Sciences, Victoria University of Wellington, Wellington, New Zealand
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4
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Lavinda O, Witt CH, Woerpel KA. Origin of High Diastereoselectivity in Reactions of Seven‐Membered‐Ring Enolates. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202114183] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Olga Lavinda
- Department of Chemistry New York University 100 Washington Square East New York NY 10003 USA
| | - Collin H. Witt
- Department of Chemistry New York University 100 Washington Square East New York NY 10003 USA
| | - K. A. Woerpel
- Department of Chemistry New York University 100 Washington Square East New York NY 10003 USA
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5
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Hai Y, Cai ZM, Li PJ, Wei MY, Wang CY, Gu YC, Shao CL. Trends of antimalarial marine natural products: progresses, challenges and opportunities. Nat Prod Rep 2022; 39:969-990. [DOI: 10.1039/d1np00075f] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
This review provides an overview of the antimalarial marine natural products, focusing on their chemistry, malaria-related targets and mechanisms, and highlighting their potential for drug development.
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Affiliation(s)
- Yang Hai
- Key Laboratory of Marine Drugs, The Ministry of Education of China, School of Medicine and Pharmacy, Ocean University of China, Qingdao, 266003, China
| | - Zi-Mu Cai
- Key Laboratory of Marine Drugs, The Ministry of Education of China, School of Medicine and Pharmacy, Ocean University of China, Qingdao, 266003, China
| | - Peng-Jie Li
- Key Laboratory of Marine Drugs, The Ministry of Education of China, School of Medicine and Pharmacy, Ocean University of China, Qingdao, 266003, China
| | - Mei-Yan Wei
- Key Laboratory of Marine Drugs, The Ministry of Education of China, School of Medicine and Pharmacy, Ocean University of China, Qingdao, 266003, China
- College of Food Science and Engineering, Ocean University of China, Qingdao, 266003, China
| | - Chang-Yun Wang
- Key Laboratory of Marine Drugs, The Ministry of Education of China, School of Medicine and Pharmacy, Ocean University of China, Qingdao, 266003, China
- Laboratory for Marine Drugs and Bioproducts, Pilot National Laboratory for Marine Science and Technology (Qingdao), Qingdao, 266237, China
| | - Yu-Cheng Gu
- Syngenta Jealott's Hill International Research Centre, Bracknell, Berkshire, RG42 6EY, UK
| | - Chang-Lun Shao
- Key Laboratory of Marine Drugs, The Ministry of Education of China, School of Medicine and Pharmacy, Ocean University of China, Qingdao, 266003, China
- Laboratory for Marine Drugs and Bioproducts, Pilot National Laboratory for Marine Science and Technology (Qingdao), Qingdao, 266237, China
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6
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Costa FLP, de Albuquerque ACF, Fiorot RG, Lião LM, Martorano LH, Mota GVS, Valverde AL, Carneiro JWM, dos Santos Junior FM. Structural characterisation of natural products by means of quantum chemical calculations of NMR parameters: new insights. Org Chem Front 2021. [DOI: 10.1039/d1qo00034a] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
In this review, we focus in all aspects of NMR simulation of natural products, from the fundamentals to the new computational toolboxes available, combining advanced quantum chemical calculations with upstream data processing and machine learning.
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Affiliation(s)
| | - Ana C. F. de Albuquerque
- Departamento de Química Orgânica
- Instituto de Química
- Universidade Federal Fluminense
- Niterói-RJ
- Brazil
| | - Rodolfo G. Fiorot
- Departamento de Química Orgânica
- Instituto de Química
- Universidade Federal Fluminense
- Niterói-RJ
- Brazil
| | - Luciano M. Lião
- Instituto de Química
- Universidade Federal de Goiás
- 74690-900 Goiânia-GO
- Brazil
| | - Lucas H. Martorano
- Departamento de Química Orgânica
- Instituto de Química
- Universidade Federal Fluminense
- Niterói-RJ
- Brazil
| | - Gunar V. S. Mota
- Faculdade de Ciências Naturais/Instituto de Ciências Exatas e Naturais
- Universidade Federal do Pará
- Belém-PA
- Brazil
| | - Alessandra L. Valverde
- Departamento de Química Orgânica
- Instituto de Química
- Universidade Federal Fluminense
- Niterói-RJ
- Brazil
| | - José W. M. Carneiro
- Departamento de Química Inorgânica
- Instituto de Química
- Universidade Federal Fluminense
- Niterói-RJ
- Brazil
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7
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Holt TA, Reddy DS, Huple DB, West LM, Rodríguez AD, Crimmins MT, Kutateladze AG. The Discreet Structural Diversity of Briarellins: DU8+ Guided Multiple Structure Revisions Yielded Two Unknown Structural Types. J Org Chem 2020; 85:6201-6205. [PMID: 32323536 DOI: 10.1021/acs.joc.0c00555] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Briarellins, a subset of C2-C11 cyclized cembranoids, were proposed to contain a C3-C14 ether or lactone bridge, similar to asbestinins. However, the total synthesis of the proposed structure of briarellin J revealed a misassignment. We revisited briarellins, computationally, with the help of a recently developed hybrid DFT/parametric method, DU8+, and revised the structures of briarellin C14-C3 ε-lactones to new structural types containing either a C14-C11 or C14-C12 lactone bridge. The original structures of briarellin and asbestinin ethers were confirmed.
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Affiliation(s)
- Tina A Holt
- Department of Chemistry and Biochemistry, University of Denver, Denver, Colorado 80208, United States
| | - D Sai Reddy
- Department of Chemistry and Biochemistry, University of Denver, Denver, Colorado 80208, United States
| | - Deepak B Huple
- Department of Chemistry and Biochemistry, University of Denver, Denver, Colorado 80208, United States
| | - Lyndon M West
- Department of Chemistry and Biochemistry, Florida Atlantic University, Boca Raton, Florida 33431, United States
| | - Abimael D Rodríguez
- Molecular Science Research Center, University of Puerto Rico, 1390 Ponce de León Avenue, San Juan, 00926, Puerto Rico
| | - Michael T Crimmins
- Department of Chemistry, University of North Carolina, Chapel Hill, North Carolina 27599-3290, United States
| | - Andrei G Kutateladze
- Department of Chemistry and Biochemistry, University of Denver, Denver, Colorado 80208, United States
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8
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Campbell A, Som IM, Wilson C, Clark JS. Total Syntheses of 11-Acetoxy-4-deoxyasbestinin D, 4-Deoxyasbestinin C, Asbestinin-10, -20, -21 and -23. Chemistry 2020; 26:1155-1160. [PMID: 31710141 PMCID: PMC7027880 DOI: 10.1002/chem.201904998] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2019] [Indexed: 11/30/2022]
Abstract
Six members of the asbestinin family of marine diterpene natural products have been synthesized in an efficient and stereoselective manner from a single oxa‐bridged intermediate. Five of these natural products have not been synthesized previously and the structures of four of them have been confirmed as those proposed originally or following revisions to the original structures. The fifth natural product—asbestinin‐21—has been shown to be a diastereomer of the compound that had been proposed previously.
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Affiliation(s)
- Angus Campbell
- School of Chemistry, Joseph Black Building, University of Glasgow, University Avenue, Glasgow, G12 8QQ, UK
| | - Ian Mat Som
- School of Chemistry, Joseph Black Building, University of Glasgow, University Avenue, Glasgow, G12 8QQ, UK
| | - Claire Wilson
- School of Chemistry, Joseph Black Building, University of Glasgow, University Avenue, Glasgow, G12 8QQ, UK
| | - J Stephen Clark
- School of Chemistry, Joseph Black Building, University of Glasgow, University Avenue, Glasgow, G12 8QQ, UK
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9
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Li G, Dickschat JS, Guo YW. Diving into the world of marine 2,11-cyclized cembranoids: a summary of new compounds and their biological activities. Nat Prod Rep 2020; 37:1367-1383. [DOI: 10.1039/d0np00016g] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
This review summarises new marine 2,11-cyclized cembranoids from the past decade in a structured presentation according to their hypothetical biosynthesis.
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Affiliation(s)
- Geng Li
- State Key Laboratory of Drug Research
- Shanghai Institute of Materia Medica
- Chinese Academy of Sciences
- Shanghai 201203
- China
| | - Jeroen S. Dickschat
- Kekulé-Institute for Organic Chemistry and Biochemistry
- University of Bonn
- 53121 Bonn
- Germany
| | - Yue-Wei Guo
- State Key Laboratory of Drug Research
- Shanghai Institute of Materia Medica
- Chinese Academy of Sciences
- Shanghai 201203
- China
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10
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Crimmins MT, Zhang Y, Williams PS. Approach to the Synthesis of Briarane Diterpenes through a Dianionic Claisen Rearrangement and Ring-Closing Metathesis. Org Lett 2017; 19:3907-3910. [DOI: 10.1021/acs.orglett.7b01806] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Michael T. Crimmins
- Kenan, Caudill, Venable,
and Murray Laboratories of Chemistry University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, United States
| | - Yan Zhang
- Kenan, Caudill, Venable,
and Murray Laboratories of Chemistry University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, United States
| | - Philip S. Williams
- Kenan, Caudill, Venable,
and Murray Laboratories of Chemistry University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, United States
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11
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Welford AJ, Caldwell JJ, Liu M, Richards M, Brown N, Lomas C, Tizzard GJ, Pitak MB, Coles SJ, Eccles SA, Raynaud FI, Collins I. Synthesis and Evaluation of a 2,11-Cembranoid-Inspired Library. Chemistry 2016; 22:5657-64. [PMID: 26929153 PMCID: PMC4869678 DOI: 10.1002/chem.201505093] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2015] [Indexed: 01/22/2023]
Abstract
The 2,11-cembranoid family of natural products has been used as inspiration for the synthesis of a structurally simplified, functionally diverse library of octahydroisobenzofuran-based compounds designed to augment a typical medicinal chemistry library screen. Ring-closing metathesis, lactonisation and SmI2 -mediated methods were exemplified and applied to the installation of a third ring to mimic the nine-membered ring of the 2,11-cembranoids. The library was assessed for aqueous solubility and permeability, with a chemical-space analysis performed for comparison to the family of cembranoid natural products and a sample set of a screening library. Preliminary investigations in cancer cells showed that the simpler scaffolds could recapitulate the reported anti-migratory activity of the natural products.
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Affiliation(s)
- Amanda J Welford
- Division of Cancer Therapeutics, The Institute of Cancer Research, London, SM2 5NG, UK
| | - John J Caldwell
- Division of Cancer Therapeutics, The Institute of Cancer Research, London, SM2 5NG, UK.
| | - Manjuan Liu
- Division of Cancer Therapeutics, The Institute of Cancer Research, London, SM2 5NG, UK
| | - Meirion Richards
- Division of Cancer Therapeutics, The Institute of Cancer Research, London, SM2 5NG, UK
| | - Nathan Brown
- Division of Cancer Therapeutics, The Institute of Cancer Research, London, SM2 5NG, UK
| | - Cara Lomas
- Division of Cancer Therapeutics, The Institute of Cancer Research, London, SM2 5NG, UK
| | - Graham J Tizzard
- UK National Crystallography Service, University of Southampton, Southampton, SO17 1BJ, UK
| | - Mateusz B Pitak
- UK National Crystallography Service, University of Southampton, Southampton, SO17 1BJ, UK
| | - Simon J Coles
- UK National Crystallography Service, University of Southampton, Southampton, SO17 1BJ, UK
| | - Suzanne A Eccles
- Division of Cancer Therapeutics, The Institute of Cancer Research, London, SM2 5NG, UK
| | - Florence I Raynaud
- Division of Cancer Therapeutics, The Institute of Cancer Research, London, SM2 5NG, UK
| | - Ian Collins
- Division of Cancer Therapeutics, The Institute of Cancer Research, London, SM2 5NG, UK
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12
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Hooper JF, James NC, Bozkurt E, Aviyente V, White JM, Holland MC, Gilmour R, Holmes AB, Houk KN. Medium-Ring Effects on the Endo/Exo Selectivity of the Organocatalytic Intramolecular Diels–Alder Reaction. J Org Chem 2015; 80:12058-75. [DOI: 10.1021/acs.joc.5b02037] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Joel F. Hooper
- School
of Chemistry, Bio21 Institute, The University of Melbourne, 30 Flemington
Road, Melbourne, Victoria 3010, Australia
| | - Natalie C. James
- Department
of Chemistry and Biochemistry, University of California, Los Angeles, California 90095, United States
| | - Esra Bozkurt
- Laboratory
of Computational Chemistry and Biochemistry, Ecole Polytechnique Fédérale de Lausanne (EPFL), 1015 Lausanne, Switzerland
| | - Viktorya Aviyente
- Department
of Chemistry, Boğaziçi University, Bebek 34342, Istanbul, Turkey
| | - Jonathan M. White
- School
of Chemistry, Bio21 Institute, The University of Melbourne, 30 Flemington
Road, Melbourne, Victoria 3010, Australia
| | - Mareike C. Holland
- Department
of Chemistry and Biochemistry, University of California, Los Angeles, California 90095, United States
- Organisch-Chemisches
Institut, Westfälische Wilhelms-Universität Münster, 48149 Münster, Germany
| | - Ryan Gilmour
- Organisch-Chemisches
Institut, Westfälische Wilhelms-Universität Münster, 48149 Münster, Germany
| | - Andrew B. Holmes
- School
of Chemistry, Bio21 Institute, The University of Melbourne, 30 Flemington
Road, Melbourne, Victoria 3010, Australia
| | - K. N. Houk
- Department
of Chemistry and Biochemistry, University of California, Los Angeles, California 90095, United States
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13
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Ishmuratov GY, Vydrina VA, Galkina YA, Yakovleva MP, Ishmuratova NM, Tolstikov AG. Natural Seven-Membered Terpene Lactones: Synthesis and Biological Activity. Chem Nat Compd 2015. [DOI: 10.1007/s10600-015-1483-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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14
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Efficient Total Synthesis of Bioactive Natural Products: A Personal Record. CHEM REC 2014; 14:606-22. [DOI: 10.1002/tcr.201402015] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2014] [Indexed: 11/07/2022]
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15
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Crimmins MT, Knight JD, Williams PS, Zhang Y. Stereoselective synthesis of quaternary carbons via the dianionic Ireland-Claisen rearrangement. Org Lett 2014; 16:2458-61. [PMID: 24735235 PMCID: PMC4018138 DOI: 10.1021/ol5008422] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2014] [Indexed: 01/02/2023]
Abstract
A dianionic Ireland-Claisen rearrangement of chiral, nonracemic α-methyl-β-hydroxy allylic esters has been developed that proceeds with high diastereoselectivity and provides products containing three contiguous stereogenic carbons, including a quaternary center. The potential utility of the rearrangement for complex molecule synthesis is also demonstrated.
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Affiliation(s)
- Michael T. Crimmins
- Kenan, Caudill, Murray and
Venable Laboratories of Chemistry University
of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, United States
| | - John D. Knight
- Kenan, Caudill, Murray and
Venable Laboratories of Chemistry University
of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, United States
| | - Philip S. Williams
- Kenan, Caudill, Murray and
Venable Laboratories of Chemistry University
of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, United States
| | - Yan Zhang
- Kenan, Caudill, Murray and
Venable Laboratories of Chemistry University
of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, United States
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16
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Yue G, Zhang Y, Fang L, Li CC, Luo T, Yang Z. Collective Synthesis of Cladiellins Based on the Gold-Catalyzed Cascade Reaction of 1,7-Diynes. Angew Chem Int Ed Engl 2014. [DOI: 10.1002/ange.201309449] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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17
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Yue G, Zhang Y, Fang L, Li CC, Luo T, Yang Z. Collective Synthesis of Cladiellins Based on the Gold-Catalyzed Cascade Reaction of 1,7-Diynes. Angew Chem Int Ed Engl 2014; 53:1837-40. [DOI: 10.1002/anie.201309449] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2013] [Indexed: 11/07/2022]
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18
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19
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Clark JS, Berger R, Hayes ST, Senn HM, Farrugia LJ, Thomas LH, Morrison AJ, Gobbi L. Total Syntheses of Multiple Cladiellin Natural Products by Use of a Completely General Strategy. J Org Chem 2012; 78:673-96. [DOI: 10.1021/jo302542h] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- J. Stephen Clark
- WestCHEM, School of Chemistry,
Joseph Black Building, University of Glasgow, University Avenue, Glasgow G12 8QQ, United Kingdom
| | - Raphaëlle Berger
- WestCHEM, School of Chemistry,
Joseph Black Building, University of Glasgow, University Avenue, Glasgow G12 8QQ, United Kingdom
| | - Stewart T. Hayes
- School of Chemistry, University of Nottingham, University Park, Nottingham
NG7 2RD, United Kingdom
| | - Hans Martin Senn
- WestCHEM, School of Chemistry,
Joseph Black Building, University of Glasgow, University Avenue, Glasgow G12 8QQ, United Kingdom
| | - Louis J. Farrugia
- WestCHEM, School of Chemistry,
Joseph Black Building, University of Glasgow, University Avenue, Glasgow G12 8QQ, United Kingdom
| | - Lynne H. Thomas
- WestCHEM, School of Chemistry,
Joseph Black Building, University of Glasgow, University Avenue, Glasgow G12 8QQ, United Kingdom
| | | | - Luca Gobbi
- Discovery Chemistry (PRCB), F. Hoffmann-La Roche Ltd. Pharmaceuticals Division,
CH-4070 Basel, Switzerland
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20
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Goto A, Otake K, Kubo O, Sawama Y, Maegawa T, Fujioka H. Effects of phosphorus substituents on reactions of α-alkoxyphosphonium salts with nucleophiles. Chemistry 2012; 18:11423-32. [PMID: 22829528 DOI: 10.1002/chem.201200480] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2012] [Revised: 07/05/2012] [Indexed: 11/06/2022]
Abstract
The effects of phosphorus substituents on the reactivity of α-alkoxyphosphonium salts with nucleophiles has been explored. Reactions of α-alkoxyphosphonium salts, prepared from various acetals and tris(o-tolyl)phosphine, with a variety of nucleophiles proceeded efficiently. These processes represent the first examples of high-yielding nucleophilic substitution reactions of α-alkoxyphosphonium salts. The reactivity of these salts was determined by a balance between steric and electronic factors, respectively, represented by cone angles θ and CO stretching frequencies ν (steric and electronic parameters, respectively). In addition, a novel reaction of α-alkoxyphosphonium salts derived from Ph(3)P with Grignard reagents was observed to take place in the presence of O(2) to afford alcohols in good yields. A radical mechanism is proposed for this process that has gained support from isotope-labeling and radical-inhibition experiments.
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Affiliation(s)
- Akihiro Goto
- Graduate School of Pharmaceutical Sciences, Osaka University, 1-6 Yamada-oka, Suita, Osaka, 565-0871 Japan
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21
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Abstract
Covering: 2010. Previous review: Nat. Prod. Rep., 2011, 28, 196. This review covers the literature published in 2010 for marine natural products, with 895 citations (590 for the period January to December 2010) referring to compounds isolated from marine microorganisms and phytoplankton, green, brown and red algae, sponges, cnidarians, bryozoans, molluscs, tunicates, echinoderms, mangroves and other intertidal plants and microorganisms. The emphasis is on new compounds (1003 for 2010), together with the relevant biological activities, source organisms and country of origin. Biosynthetic studies, first syntheses, and syntheses that lead to the revision of structures or stereochemistries, have been included.
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Affiliation(s)
- John W Blunt
- Department of Chemistry, University of Canterbury, Christchurch, New Zealand.
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22
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Lu P, Bach T. Totalsynthese von (+)-Lactiflorin durch intramolekulare [2+2]-Photocycloaddition. Angew Chem Int Ed Engl 2011. [DOI: 10.1002/ange.201106889] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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23
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Lu P, Bach T. Total synthesis of (+)-lactiflorin by an intramolecular [2+2] photocycloaddition. Angew Chem Int Ed Engl 2011; 51:1261-4. [PMID: 22190295 DOI: 10.1002/anie.201106889] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2011] [Revised: 10/24/2011] [Indexed: 11/10/2022]
Affiliation(s)
- Ping Lu
- Lehrstuhl für Organische Chemie I, Technische Universität München, Lichtenbergstrasse 4, 85747 Garching, Germany
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24
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Suyama TL, Gerwick WH, McPhail KL. Survey of marine natural product structure revisions: a synergy of spectroscopy and chemical synthesis. Bioorg Med Chem 2011; 19:6675-701. [PMID: 21715178 PMCID: PMC3205310 DOI: 10.1016/j.bmc.2011.06.011] [Citation(s) in RCA: 135] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2011] [Revised: 05/09/2011] [Accepted: 06/02/2011] [Indexed: 11/16/2022]
Abstract
The structural assignment of new natural product molecules supports research in a multitude of disciplines that may lead to new therapeutic agents and or new understanding of disease biology. However, reports of numerous structural revisions, even of recently elucidated natural products, inspired the present survey of techniques used in structural misassignments and subsequent revisions in the context of constitutional or configurational errors. Given the comparatively recent development of marine natural products chemistry, coincident with modern spectroscopy, it is of interest to consider the relative roles of spectroscopy and chemical synthesis in the structure elucidation and revision of those marine natural products that were initially misassigned. Thus, a tabulated review of all marine natural product structural revisions from 2005 to 2010 is organized according to structural motif revised. Misassignments of constitution are more frequent than perhaps anticipated by reliance on HMBC and other advanced NMR experiments, especially when considering the full complement of all natural products. However, these techniques also feature prominently in structural revisions, specifically of marine natural products. Nevertheless, as is the case for revision of relative and absolute configuration, total synthesis is a proven partner for marine, as well as terrestrial, natural products structure elucidation. It also becomes apparent that considerable 'detective work' remains in structure elucidation, in spite of the spectacular advances in spectroscopic techniques.
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Affiliation(s)
- Takashi L. Suyama
- Department of Pharmaceutical Sciences, 203 Pharmacy Building, Oregon State University, Corvallis OR 97331, U.S.A
| | - William H. Gerwick
- Scripps Institution of Oceanography and Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla CA 92093-0212, U.S.A
| | - Kerry L. McPhail
- Department of Pharmaceutical Sciences, 203 Pharmacy Building, Oregon State University, Corvallis OR 97331, U.S.A
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Welford AJ, Collins I. The 2,11-cyclized cembranoids: cladiellins, asbestinins, and briarellins (period 1998-2010). JOURNAL OF NATURAL PRODUCTS 2011; 74:2318-2328. [PMID: 21970540 DOI: 10.1021/np200125v] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
The 2,11-cyclized cembranoids are isolated from marine invertebrates of Octocorallia species. They are a very interesting class of natural products sharing a common oxatricyclo[6.6.1.0(2,7)]pentadecane core and carrying a varied substituent pattern. This review presents their structural diversity along with the reported biological activities. The 2,11-cyclized cembranoids were comprehensively reviewed previously in 1998, and this contribution will serve as an update of that work. Since 1998 a number of structural assignments of the isolated products have been revised, some as a result of total synthesis efforts. The chemical reactivity of several of the natural compounds has been studied, and the relevance of these findings to the biosynthesis or the generation of isolation artifacts is discussed. The wide range of biological activities displayed by the 2,11-cyclized cembranoids justifies the interest shown within the synthetic chemistry community and suggests that this class of natural products remains a fruitful area for future synthetic and biological research.
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Affiliation(s)
- Amanda J Welford
- Cancer Research UK Cancer Therapeutics Unit, Institute of Cancer Research, 15 Cotswold Road, Sutton, Surrey SM2 5NG, UK
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26
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Abstract
The total syntheses of (+)-vigulariol and (-)-sclerophytin A are reported in 15 steps and 16 steps, respectively, from a known compound. The flexible, readily scalable synthetic strategy allows for rapid construction of a critical tricyclic intermediate and is demonstrated via the synthesis of these two marine natural products. A key reaction in this synthetic protocol is a combination Wittig/intramolecular Diels-Alder cycloaddition.
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Affiliation(s)
- Michael T Crimmins
- Kenan Laboratory of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599, USA.
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27
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Fujioka H, Goto A, Otake K, Kubo O, Sawama Y, Maegawa T. An unusual reaction of α-alkoxyphosphonium salts with Grignard reagents under an O2 atmosphere. Chem Commun (Camb) 2011; 47:9894-6. [PMID: 21814703 DOI: 10.1039/c1cc13919c] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Affiliation(s)
- Hiromichi Fujioka
- Graduate School of Pharmaceutical Sciences, Osaka University, Suita, Osaka, Japan.
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