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Diem Ferreira Xavier MC, Hartwig D, Lima Valente LC, Silva MS. Ditelluride-Catalyzed synthesis of phosphoramidates: A design of experiment approach. Tetrahedron 2022. [DOI: 10.1016/j.tet.2022.132879] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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2
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Nori V, Sinibaldi A, Giorgianni G, Pesciaioli F, Di Donato F, Cocco E, Biancolillo A, Landa A, Carlone A. DoE-Driven Development of an Organocatalytic Enantioselective Addition of Acetaldehyde to Nitrostyrenes in Water. Chemistry 2022; 28:e202104524. [PMID: 35230722 PMCID: PMC9313880 DOI: 10.1002/chem.202104524] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2021] [Indexed: 12/26/2022]
Abstract
The development of an enantioselective enamine‐catalysed addition of masked acetaldehyde to nitroalkenes via a rational approach helped to move away from the use of chloroform. The presented research allows the use of water as a reaction medium, therefore improving the industrial relevance of a protocol to access very important pharmaceutical intermediates. Critical to the success is the use of chemometrics‐assisted ‘Design of Experiments’ (DoE) optimisation during the development of the presented new synthetic approach, which allows to investigate the chemical space in a rational way.
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Affiliation(s)
- Valeria Nori
- Department of Physical and Chemical Sciences, Università degli Studi dell'Aquila, via Vetoio, 67100, L'Aquila, Italy
| | - Arianna Sinibaldi
- Department of Physical and Chemical Sciences, Università degli Studi dell'Aquila, via Vetoio, 67100, L'Aquila, Italy
| | - Giuliana Giorgianni
- Department of Physical and Chemical Sciences, Università degli Studi dell'Aquila, via Vetoio, 67100, L'Aquila, Italy
| | - Fabio Pesciaioli
- Department of Physical and Chemical Sciences, Università degli Studi dell'Aquila, via Vetoio, 67100, L'Aquila, Italy
| | - Francesca Di Donato
- Department of Physical and Chemical Sciences, Università degli Studi dell'Aquila, via Vetoio, 67100, L'Aquila, Italy
| | - Emanuele Cocco
- Department of Physical and Chemical Sciences, Università degli Studi dell'Aquila, via Vetoio, 67100, L'Aquila, Italy
| | - Alessandra Biancolillo
- Department of Physical and Chemical Sciences, Università degli Studi dell'Aquila, via Vetoio, 67100, L'Aquila, Italy
| | - Aitor Landa
- Departamento de Química Orgánica I, Universidad del País Vasco, Manuel Lardizabal 3, 20018 -, San Sebastián, Spain
| | - Armando Carlone
- Department of Physical and Chemical Sciences, Università degli Studi dell'Aquila, via Vetoio, 67100, L'Aquila, Italy
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3
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Fath V, Kockmann N, Otto J, Röder T. Self-optimising processes and real-time-optimisation of organic syntheses in a microreactor system using Nelder–Mead and design of experiments. REACT CHEM ENG 2020. [DOI: 10.1039/d0re00081g] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Comparing an enhanced simplex algorithm with model-free design of experiments, this work presents a flexible platform for multi-objective, real-time optimisation.
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Affiliation(s)
- Verena Fath
- Department of Biochemical and Chemical Engineering
- Equipment Design
- TU Dortmund University
- 44227 Dortmund
- Germany
| | - Norbert Kockmann
- Department of Biochemical and Chemical Engineering
- Equipment Design
- TU Dortmund University
- 44227 Dortmund
- Germany
| | - Jürgen Otto
- Institute for Applied Thermo- and Fluid Dynamics
- Mannheim University of Applied Sciences
- 68163 Mannheim
- Germany
| | - Thorsten Röder
- Institute of Chemical Process Engineering
- Mannheim University of Applied Sciences
- 68163 Mannheim
- Germany
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4
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Choi A, Coldham I. Three-component couplings for the synthesis of pyrroloquinoxalinones by azomethine ylide 1,3-dipolar cycloaddition chemistry. Tetrahedron Lett 2019. [DOI: 10.1016/j.tetlet.2019.151023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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5
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McWilliams JC, Sidler DR, Sun Y, Mathre DJ. Applying Statistical Design of Experiments and Automation to the Rapid Optimization of Metal-Catalyzed Processes in Process Development. ACTA ACUST UNITED AC 2017. [DOI: 10.1016/j.jala.2005.09.012] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Abstract
The application of automation in conjunction with DoE designs towards the rapid discovery and optimization of metal-catalyzed reactions used in the synthetic preparation of clinical drug candidates at Merck Process Research is demonstrated with three examples. A description of the software and hardware is provided, followed by three examples highlighting these applications. The first example highlights a DoE optimization of a platinum-catalyzed chemoselective hydrogenation of a nitroaromatic nitrile. In the second example, automated screening is employed to discover a highly efficient palladium catalyst that affects nitrostyrene cyclization under a carbon monoxide reducing atmosphere. In the last example, a rapid discovery and DoE optimization of a rhodium-catalyzed diastereoselective hydrogenation of an unsaturated ester is detailed.
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Affiliation(s)
| | | | - Yongkui Sun
- Department of Process Research, Merck & Co., Rahway, NJ
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6
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Murray PM, Bellany F, Benhamou L, Bučar DK, Tabor AB, Sheppard TD. The application of design of experiments (DoE) reaction optimisation and solvent selection in the development of new synthetic chemistry. Org Biomol Chem 2015; 14:2373-84. [PMID: 26699438 DOI: 10.1039/c5ob01892g] [Citation(s) in RCA: 87] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
This article outlines the benefits of using 'Design of Experiments' (DoE) optimisation during the development of new synthetic methodology. A particularly important factor in the development of new chemical reactions is the choice of solvent which can often drastically alter the efficiency and selectivity of a process. Whilst solvent optimisation is usually done in a non-systematic way based upon a chemist's intuition and previous laboratory experience, we illustrate how optimisation of the solvent for a reaction can be carried out by using a 'map of solvent space' in a DoE optimisation. A new solvent map has been developed specifically for optimisation of new chemical reactions using principle component analysis (PCA) incorporating 136 solvents with a wide range of properties. The new solvent map has been used to identify safer alternatives to toxic/hazardous solvents, and also in the optimisation of an S(N)Ar reaction.
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Affiliation(s)
- Paul M Murray
- Paul Murray Catalysis Consulting Ltd, 67 Hudson Close, Yate, BS37 4NP, UK.
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7
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Chen J, Przyuski K, Roemmele R, Bakale RP. Improved Continuous Flow Processing: Benzimidazole Ring Formation via Catalytic Hydrogenation of an Aromatic Nitro Compound. Org Process Res Dev 2013. [DOI: 10.1021/op400179f] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Affiliation(s)
- Jian Chen
- Chemical Process Research and Development, Teva Pharmaceuticals, 383 Phoenixville Pike, Malvern,
Pennsylvania 19355, United States
| | - Katrin Przyuski
- Chemical Process Research and Development, Teva Pharmaceuticals, 383 Phoenixville Pike, Malvern,
Pennsylvania 19355, United States
| | - Renee Roemmele
- Chemical Process Research and Development, Teva Pharmaceuticals, 383 Phoenixville Pike, Malvern,
Pennsylvania 19355, United States
| | - Roger P. Bakale
- Chemical Process Research and Development, Teva Pharmaceuticals, 383 Phoenixville Pike, Malvern,
Pennsylvania 19355, United States
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8
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Morrill LC, Lebl T, Slawin AMZ, Smith AD. Catalytic asymmetric α-amination of carboxylic acids using isothioureas. Chem Sci 2012. [DOI: 10.1039/c2sc20171b] [Citation(s) in RCA: 88] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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9
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Han X, Civiello RL, Mercer SE, Macor JE, Dubowchik GM. Syntheses of aza and fluorine-substituted 3-(piperidin-4-yl)-4,5-dihydro-1H-benzo[d][1,3]diazepin-2(3H)-ones. Tetrahedron Lett 2009. [DOI: 10.1016/j.tetlet.2008.11.012] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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10
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Abstract
The frequently overlooked benefits that considerably simplify and enrich our standard of living are most often hinged upon chemical synthesis. From the development of drugs in the ongoing fight against disease to the more aesthetic aspects of society with the preparation of perfumes and cosmetics, synthetic chemistry is the pivotally involved science. Furthermore, the quality and quantity of our food supply relies heavily upon synthesised products, as do almost all aspects of our modern society ranging from paints, pigments and dyestuffs to plastics, polymers and other man-made materials. However, the demands being made on chemists are changing at an unprecedented pace and synthesis, or molecular assembly, must continue to evolve in response to the new challenges and opportunities that arise. Responding to this need for improved productivity and efficiency chemists have started to explore new approaches to compound synthesis. Flow-based synthesis incorporating solid supported reagents and scavengers has emerged as a powerful way of manipulating chemical entities and is envisaged to become a core laboratory technology of the future.
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Affiliation(s)
- I R Baxendale
- Innovative Technology Center (ACS), Department of Chemistry, University of Cambridge, Cambridge, UK
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11
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Sun Park Y, Kim Y, Hee Lee M, Ta Choi E, Sun No E. Diacetone-D-glucose-Mediated Asymmetric Syntheses of Dihydroquinoxalinones. HETEROCYCLES 2007. [DOI: 10.3987/com-06-10910] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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12
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Rubin AE, Tummala S, Both DA, Wang C, Delaney EJ. Emerging Technologies Supporting Chemical Process R&D and Their Increasing Impact on Productivity in the Pharmaceutical Industry. Chem Rev 2006; 106:2794-810. [PMID: 16836299 DOI: 10.1021/cr040674i] [Citation(s) in RCA: 82] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Affiliation(s)
- A Erik Rubin
- Process R&D Department, Bristol-Myers Squibb Company, One Squibb Drive, New Brunswick, New Jersey 09903, USA
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13
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Kotlyar V, Shahar L, Lellouche JP. A simple homemade reaction station for use in parallel solution-phase synthesis. Optimization of a regioselective one-step deprotective o-formylation reaction mediated by the Vilsmeier-Haack reagent POCl3.DMF. Mol Divers 2006; 10:255-64. [PMID: 16710806 DOI: 10.1007/s11030-005-9013-1] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2005] [Accepted: 12/03/2005] [Indexed: 10/24/2022]
Abstract
We report herein the fabrication of a simple and price-affordable portable reaction station for use in parallel solution-phase synthesis. This homemade device uses currently available laboratory components and equipment. Specifically designed to fit standard magnetic hotplates/stirrers, it can simultaneously hold up to 24 heated and magnetically stirred glass reactors of both 10 and 50 mL capacities. Glass reactors are connected by flexible 16-gauge metal needles to a central gas manifold equipped with an inlet/outlet for vacuum and inert gases. Reaction temperatures can be optimally varied from -78 ( composite function)C to 150 degrees C. Using a statistical screening DOE method, this parallel array reactor station has been successfully operated to optimize the one-step deprotective O-formylation of a sterically hindered bis-O-tert-butyldiphenylsilyl (O-TBDPS) aromatic diol. The latter transformation was mediated by the Vilsmeier-Haack reagent POCl3.DMF using a range of Lewis acid and metal salt promoters, including their binary combinations.
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Affiliation(s)
- Vadim Kotlyar
- Department of Chemistry, Bar-Ilan University, Ramat-Gan, 52900, Israel
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14
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McNamara CA, King F, Bradley M. Experimental design and the optimization of a polymer supported palladium complex for use in the Heck reaction. Tetrahedron Lett 2004. [DOI: 10.1016/j.tetlet.2004.09.016] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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15
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Van Arnum SD, Moffet H, Carpenter BK. Process Control Limits from a Laboratory Study on the Ni(0)-Mediated Coupling of Ethyl Acrylate with a C-22 Steroidal Iodide: A Case Study on the Role of Experimental Design in Highly Developed Processes. Org Process Res Dev 2004. [DOI: 10.1021/op049908q] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Susan D. Van Arnum
- Pharmaceutical Process Development, Hoffmann-La Roche, 340 Kingsland Street, Nutley, New Jersey 07110, U.S.A., and Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, U.S.A
| | - Harold Moffet
- Pharmaceutical Process Development, Hoffmann-La Roche, 340 Kingsland Street, Nutley, New Jersey 07110, U.S.A., and Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, U.S.A
| | - Barry K. Carpenter
- Pharmaceutical Process Development, Hoffmann-La Roche, 340 Kingsland Street, Nutley, New Jersey 07110, U.S.A., and Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853, U.S.A
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16
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Abstract
The use of 'design of experiments' (DoE) is a revolutionary approach to optimisation and screening of experimental parameters. Simple experimental designs and statistical tools for data analysis can provide much information about the system under investigation after only a few experiments. Such information can be key in decision-making for further experiments and can enable the development of robust and reliable protocols for chemical synthesis, analytical methods or biological assays. Coupling of design of experiments with modern high-throughput automation systems has the potential to maximise the capabilities of these systems and give increased productivity for many drug discovery applications.
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Affiliation(s)
- Heather Tye
- Evotec OAI, 151 Milton Park, Abingdon, Oxfordshire, UK, OX14 4SD.
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17
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Gooding OW. Process optimization using combinatorial design principles: parallel synthesis and design of experiment methods. Curr Opin Chem Biol 2004; 8:297-304. [PMID: 15183328 DOI: 10.1016/j.cbpa.2004.04.009] [Citation(s) in RCA: 46] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The use of parallel synthesis techniques with statistical design of experiment (DoE) methods is a powerful combination for the optimization of chemical processes. Advances in parallel synthesis equipment and easy to use software for statistical DoE have fueled a growing acceptance of these techniques in the pharmaceutical industry. As drug candidate structures become more complex at the same time that development timelines are compressed, these enabling technologies promise to become more important in the future.
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Affiliation(s)
- Owen W Gooding
- Argonaut Technologies, 1101 Chess Drive, Foster City, California 94404, USA.
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18
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Affiliation(s)
- Roland E Dolle
- Department of Chemistry, Adolor Corporation, 700 Pennsylvania Drive, Exton, PA 19341, USA.
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