Visual pigment of the coelacanth

The cone-specific visual cycle

Cone photoreceptors mediate our daytime vision and function under bright and rapidly-changing light conditions. As their visual pigment is destroyed in the process of photoactivation, the continuous function of cones imposes the need for rapid recycling of their chromophore and regeneration of their pigment. The canonical retinoid visual cycle through the retinal pigment epithelium cells recycles chromophore and supplies it to both rods and cones. However, shortcomings of this pathway, including its slow rate and competition with rods for chromophore, have led to the suggestion that cones might use a separate mechanism for recycling of chromophore. In the past four decades biochemical studies have identified enzymatic activities consistent with recycling chromophore in the retinas of cone-dominant animals, such as chicken and ground squirrel. These studies have led to the hypothesis of a cone-specific retina visual cycle. The physiological relevance of these studies was controversial for a long time and evidence for the function of this visual cycle emerged only in very recent studies and will be the focus of this review. The retina visual cycle supplies chromophore and promotes pigment regeneration only in cones but not in rods. This pathway is independent of the pigment epithelium and instead involves the Müller cells in the retina, where chromophore is recycled and supplied selectively to cones. The rapid supply of chromophore through the retina visual cycle is critical for extending the dynamic range of cones to bright light and for their rapid dark adaptation following exposure to light. The importance of the retina visual cycle is emphasized also by its preservation through evolution as its function has now been demonstrated in species ranging from salamander to zebrafish, mouse, primate, and human.

Light responses and light adaptation in rat retinal rods at different temperatures

Rod responses to brief pulses of light were recorded as electroretinogram (ERG) mass potentials across isolated, aspartate-superfused rat retinas at different temperatures and intensities of steady background light. The objective was to clarify to what extent differences in sensitivity, response kinetics and light adaptation between mammalian and amphibian rods can be explained by temperature and outer-segment size without assuming functional differences in the phototransduction molecules. Corresponding information for amphibian rods from the literature was supplemented by new recordings from toad retina. All light intensities were expressed as photoisomerizations per rod (Rh*). In the rat retina, an estimated 34% of incident photons at the wavelength of peak sensitivity caused isomerizations in rods, as the (hexagonally packed) outer segments measured 1.7 microm x 22 microm and had specific absorbance of 0.016 microm(-1) on average. Fractional sensitivity (S) in darkness increased with cooling in a similar manner in rat and toad rods, but the rat function as a whole was displaced to a ca 0.7 log unit higher sensitivity level. This difference can be fully explained by the smaller dimensions of rat rod outer segments, since the same rate of phosphodiesterase (PDE) activation by activated rhodopsin will produce a faster drop in cGMP concentration, hence a larger response in rat than in toad. In the range 15-25 degrees C, the waveform and absolute time scale of dark-adapted dim-flash photoresponses at any given temperature were similar in rat and toad, although the overall temperature dependence of the time to peak (t(p)) was somewhat steeper in rat (Q(10) approximately 4 versus 2-3). Light adaptation was similar in rat and amphibian rods when measured at the same temperature. The mean background intensity that depressed S by 1 log unit at 12 degrees C was in the range 20-50 Rh* s(-1) in both, compared with ca 4500 Rh* s(-1) in rat rods at 36 degrees C. We conclude that it is not necessary to assume major differences in the functional properties of the phototransduction molecules to account for the differences in response properties of mammalian and amphibian rods.

Molecular evolution of vertebrate visual pigments

Dramatic improvement of our understanding of the genetic basis of vision was brought by the molecular characterization of the bovine rhodopsin gene and the human rhodopsin and color opsin genes (Nathans and Hogness, 1983; Nathans et al., 1984, 1986a,b). The availability of cDNA clones from these studies has facilitated the isolation of retinal and nonretinal opsin genes and cDNA clones from a large variety of species. Today, the number of genomic and cDNA clones of opsin genes isolated from different vertebrate species exceeds 100 and is increasing rapidly. The opsin gene sequences reveal the importance of the origin and differentiation of various opsins and visual pigments. To understand the molecular genetic basis of spectral tuning of visual pigments, it is essential to establish correlations between a series of the sequences of visual pigments and their lambda(max) values. The potentially important amino acid changes identified in this way have to be tested whether they are in fact responsible for the lambda(max)-shifts using site-directed mutagenesis and cultured cells. A major goal of molecular evolutionary genetics is to understand the molecular mechanisms involved in functional adaptations of organisms to different environments, including the mechanisms of the regulation of the spectral absorption. Therefore, both molecular evolutionary analyses of visual pigments and vision science have an important common goal.

Adaptive evolution of color vision of the Comoran coelacanth (Latimeria chalumnae)

The coelacanth, a "living fossil," lives near the coast of the Comoros archipelago in the Indian Ocean. Living at a depth of about 200 m, the Comoran coelacanth receives only a narrow range of light, at about 480 nm. To detect the entire range of "color" at this depth, the coelacanth appears to use only two closely related paralogous RH1 and RH2 visual pigments with the optimum light sensitivities (lambdamax) at 478 nm and 485 nm, respectively. The lambdamax values are shifted about 20 nm toward blue compared with those of the corresponding orthologous pigments. Mutagenesis experiments show that each of these coadapted changes is fully explained by two amino acid replacements.

Adaptations of visual pigments to the photic environment of the deep sea

This is a summary of studies that bear on the problems of the adaptation of visual pigments to the photic environment of the deep sea. The results suggest that the spectral absorption of these retinal pigments is shifted toward the blue in order to match the dim, blue-green downwelling light and/or the bioluminescence of organisms that are critical to the life of the species. Through such a spectral match, greater visual sensitivity is achieved for life in the special photic condition of their habitat. This adaptation has been found for chimaerid fishes, for elasmobranchs, for teleosts, for mammals, and for certain crustaceans and cephalopods. The most convincing evidence for such an adaptive match has been found in teleosts that have red-emitting photophores. In these fishes a photopigment with absorbance shifted toward the red has been found by extraction and microspectrophotometry. A few exceptions to this idea of an adaptive match have appeared in the literature, the cone pigments, especially, being examples of such offset pigments. The malacosteid fishes have been shown to have a red-shifted retinal pigment with 11-cis-3-dehydroretinal as the chromophore and some invertebrates have also adopted this molecule to adjust the spectral absorption to the photic environment or to the bioluminescence. These studies are beginning to reveal that visual biochemistry is basically the same in vertebrates and invertebrates and that the visual pigment protein arose early in phylogeny and has been retained, with appropraite modifications, to the present.

The visual pigment sensitivity hypothesis: further evidence from fishes of varying habitats

Visual pigments were extracted from the retinas of 8 species of marine teleosts and 4 species of elasmobranchs and a comparison was made of the pigment properties from these fishes, some inhabiting surface waters, others from the mesopelagic zone, and a few migrating vertically between these two environments. An association was found between the spectral position of the absorbance curve and the habitat depth or habitat behavior, with the blue-shifted chrysopsins being the pigments of the twilight zone fishes and the rhodopsins with fishes living near the surface. The retina of the swell shark (Cephaloscyllium ventriosum) yielded extracts with two photopigments; one, a rhodopsin at 498 nm; the second, a chrysopsin at 478 nm. This fish has been reported to practice seasonal vertical migrations between the surface and the mesopelagic waters. In addition to the spectral absorbance, several properties of these visual pigments were examined, including the meta-III product of photic bleaching, regeneration with added 11-cis and 9-cis retinals, and the chromophoric photosensitivity. The chrysopsin properties were found to be fundamentally similar to those of typical vertebrate rhodopsins. Correlating the spectral data with the habitat and habitat behavior of our fishes gives us confidence in the idea that the scotopic pigments have evolved as adaptations to those aspects of their color environment that are critical to the survival of the species.

The choroidal tapetum lucidum of Latimeria chalumnae

The choroidal tapetum of Latimeria chalumnae has been examined by optical, and by transmission and scanning electron microscopy. The retinal epithelium, which contains no pigment, is separated from the tapetum by Bruch’s membrane and the well-developed choriocapillaris. The tapetum itself consists of cells containing stacks of flat hexagonal crystals, shown by paper chromatography to be guanine. The crystals are arranged parallel within each cell; most are also parallel to those in neighbouring cells, though the crystals in some cells make a large angle with the general crystal plane. In the main the crystals lie so that their plane is approximately perpendicular to the optic axis of the eye. Owing to the retinal curvature, the angle of the crystal plane varies with position in the eye. The conditions for reflexion by constructive interference are fulfilled. Few choroidal melanocytes lie among the cells of the tapetum, which is not occlusible.

Retinal structure in Latimeria chalumnae

The retina of Latimeria chalumnae contains four types of visual cells; most are rods, and there are three types of cones. Rod outer segments are cylindrical and appearances at their bases suggest that they may be renewed discontinuously from the inner segment. The rods have simple synaptic spherules, each bearing a single basal filament ending in a club-shaped expansion. Type 1 cones contain an oil droplet, and have a complex synaptic pedicle bearing about 12 basal filaments. Type 2 cones have no droplet, and a pedicle bearing about six basal filaments and of complexity between that of rods and type 1 cones. Type 3 cones resemble type 2, except that they have a clear vacuole, but not an oil droplet, in the inner segment. The pigment epithelium contains abundant phagosomes, but pigment granules are absent where the epithelium overlies the choroidal tapetum lucidum. Regular arrays of tubules occur in the cytoplasm, some of which appear to be formed from three interlacing hexagonal nets. Two types of bipolar cell are present. Most are displaced bipolars, with nuclei in the outer nuclear layer. The rest are large, with nuclei in the horizontal cell layer. Both types bear Landolt’s clubs, which penetrate the outer limiting membrane. Their endings contain a cilium complex, and a single large mitochondrion. Some contain 60 nm vesicles, which are also found near disrupted club endings. Two types of horizontal cell are present. A few dark-staining cells with extensive web-like processes occur next to the outer plexiform layer. The expansions of rod basal filaments make contact with these cells. More voluminous pale staining cells with long cylindrical processes occur vitread to the dark cells. Presumed amacrine cells form a layer vitread to the horizontal cells; they and the inner plexiform layer were not well fixed. Sparse ganglion cells occur at the same level as the nerve fibre bundles. Radial fibres penetrate the horizontal cell layer as compact columns. They do not contribute to the outer plexiform or horizontal cell layers, but elsewhere spread amongst the other retinal elements. Their expansions determine the inner contour of the retina. Cells, probably microglial, which contain lysosomes are scattered amongst the other elements. 143000 myelinated fibres are present in the optic nerve, which also contains non-myelinated fibres. Retinal cell counts are given.