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Wang M, Grason G. Thermal stability and secondary aggregation of self-limiting, geometrically frustrated assemblies: Chain assembly of incommensurate polybricks. Phys Rev E 2024; 109:014608. [PMID: 38366461 DOI: 10.1103/physreve.109.014608] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2023] [Accepted: 12/21/2023] [Indexed: 02/18/2024]
Abstract
In geometrically frustrated assemblies, equilibrium self-limitation manifests in the form of a minimum in the free energy per subunit at a finite, multisubunit size which results from the competition between the elastic costs of frustration within an assembly and the surface energy at its boundaries. Physical realizations-from ill-fitting particle assemblies to self-twisting protein superstructures-are capable of multiple mechanisms of escaping the cumulative costs of frustration, resulting in unlimited equilibrium assembly, including elastic modes of "shape flattening" and the formation of weak, defective bonds that screen intra-assembly stresses. Here we study a model of one-dimensional chain assembly of incommensurate "polybricks" and determine its equilibrium assembly as a function of temperature, concentration, degree of shape frustration, elasticity, and interparticle binding, notably focusing on how weakly cohesive, defective bonds give rise to strongly temperature-dependent assembly. Complex assembly behavior derives from the competition between multiple distinct local minima in the free-energy landscape, including self-limiting chains, weakly bound aggregates of self-limiting chains, and strongly bound, elastically defrustrated assemblies. We show that this scenario, in general, gives rise to anomalous multiple aggregation behavior, in which disperse subunits (stable at low concentration and high temperature) first exhibit a primary aggregation transition to self-limiting chains (at intermediate concentration and temperature) which are ultimately unstable to condensation into unlimited assembly of finite-chains through weak binding beyond a secondary aggregation transition (at low temperature and high concentration). We show that window of stable self-limitation is determined both by the elastic costs of frustration in the assembly as well as energetic and entropic features of intersubunit binding.
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Affiliation(s)
- Michael Wang
- Department of Polymer Science and Engineering, University of Massachusetts, Amherst, Massachusetts 01003, USA
| | - Gregory Grason
- Department of Polymer Science and Engineering, University of Massachusetts, Amherst, Massachusetts 01003, USA
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2
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Boccardo F, Pierre-Louis O. Controlling the Shape of Small Clusters with and without Macroscopic Fields. PHYSICAL REVIEW LETTERS 2022; 128:256102. [PMID: 35802436 DOI: 10.1103/physrevlett.128.256102] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2021] [Accepted: 05/09/2022] [Indexed: 06/15/2023]
Abstract
Despite major advances in the understanding of the formation and dynamics of nanoclusters in the past decades, theoretical bases for the control of their shape are still lacking. We investigate strategies for driving fluctuating few-particle clusters to an arbitrary target shape in minimum time with or without an external field. This question is recast into a first passage problem, solved numerically, and discussed within a high temperature expansion. Without field, large-enough low-energy target shapes exhibit an optimal temperature at which they are reached in minimum time. We then compute the optimal way to set an external field to minimize the time to reach the target, leading to a gain of time that grows when increasing cluster size or decreasing temperature. This gain can shift the optimal temperature or even create one. Our results could apply to clusters of atoms at equilibrium, and colloidal or nanoparticle clusters under thermo- or electrophoresis.
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Affiliation(s)
- Francesco Boccardo
- Institut Lumière Matière, UMR5306 Université Lyon 1-CNRS, 69622 Villeurbanne, France
| | - Olivier Pierre-Louis
- Institut Lumière Matière, UMR5306 Université Lyon 1-CNRS, 69622 Villeurbanne, France
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3
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Jamali SB, Khaskheli MA, Abro MI, Chand R, Rekik N, Affan H, Ikram R. Confirming the SERS enhancement at large mapping area using self-assembly of silver nanocube at liquid-liquid cyclohexane/water interface. J Mol Liq 2021. [DOI: 10.1016/j.molliq.2021.115365] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
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4
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Self-Assembly of Human Serum Albumin: A Simplex Phenomenon. Biomolecules 2017; 7:biom7030069. [PMID: 28930179 PMCID: PMC5618250 DOI: 10.3390/biom7030069] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2017] [Revised: 09/14/2017] [Accepted: 09/14/2017] [Indexed: 12/01/2022] Open
Abstract
Spontaneous self-assemblies of biomolecules can generate geometrical patterns. Our findings provide an insight into the mechanism of self-assembled ring pattern generation by human serum albumin (HSA). The self-assembly is a process guided by kinetic and thermodynamic parameters. The generated protein ring patterns display a behavior which is geometrically related to a n-simplex model and is explained through thermodynamics and chemical kinetics.
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5
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Ribbon-Like Nanopattern Formed on Nitrogen-Adsorbed Vicinal Cu(001). E-JOURNAL OF SURFACE SCIENCE AND NANOTECHNOLOGY 2016. [DOI: 10.1380/ejssnt.2016.43] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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6
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Gupta T, Hannon JB, Tersoff J, Tromp RM, Ott JA, Bruley J, Steingart DA. Strain-driven mound formation of substrate under epitaxial nanoparticles. NANO LETTERS 2015; 15:34-38. [PMID: 25506710 DOI: 10.1021/nl502516y] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
We observe the growth of crystalline SiC nanoparticles on Si(001) at 900 °C using in situ electron microscopy. Following nucleation and growth of the SiC, there is a massive migration of Si, forming a crystalline Si mound underneath each nanoparticle that lifts it 4-5 nm above the initial growth surface. The volume of the Si mounds is roughly five to seven times the volume of the SiC nanoparticles. We propose that relaxation of strain drives the mound formation. This new mechanism for relieving interfacial strain, which involves a dramatic restructuring of the substrate, is in striking contrast to the familiar scenario in which only the deposited material restructures to relieve strain.
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Affiliation(s)
- Tanya Gupta
- Department of Mechanical and Aerospace Engineering and the Andlinger Center for Energy and The Environment and ‡IBM Research Division, T. J. Watson Research Center , Yorktown Heights, New York 10598, United States
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7
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Hershberger MT, Hupalo M, Thiel PA, Wang CZ, Ho KM, Tringides MC. Nonclassical "explosive" nucleation in Pb/Si(111) at low temperatures. PHYSICAL REVIEW LETTERS 2014; 113:236101. [PMID: 25526139 DOI: 10.1103/physrevlett.113.236101] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/07/2014] [Indexed: 06/04/2023]
Abstract
Classically, the onset of nucleation is defined in terms of a critical cluster of the condensed phase, which forms from the gradual aggregation of randomly diffusing adatoms. Experiments in Pb/Si(111) at low temperature have discovered a dramatically different type of nucleation, with perfect crystalline islands emerging "explosively" out of the compressed wetting layer after a critical coverage Θ_{c}=1.22 ML is reached. The unexpectedly high island growth rates, the directional correlations in the growth of neighboring islands and the persistence in time of where mass is added in individual islands, suggest that nucleation is a result of the highly coherent motion of the wetting layer, over mesoscopic distances.
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Affiliation(s)
- M T Hershberger
- Ames Laboratory-U.S. Department of Energy, Iowa State University, Ames, Iowa 50011, USA and Department of Physics and Astronomy, Iowa State University, Ames, Iowa 50011, USA
| | - M Hupalo
- Ames Laboratory-U.S. Department of Energy, Iowa State University, Ames, Iowa 50011, USA
| | - P A Thiel
- Ames Laboratory-U.S. Department of Energy, Iowa State University, Ames, Iowa 50011, USA and Department of Chemistry, Iowa State University, Ames, Iowa 50011, USA and Department of Materials Science and Engineering, Iowa State University, Ames, Iowa 50011, USA
| | - C Z Wang
- Ames Laboratory-U.S. Department of Energy, Iowa State University, Ames, Iowa 50011, USA
| | - K M Ho
- Ames Laboratory-U.S. Department of Energy, Iowa State University, Ames, Iowa 50011, USA and Department of Physics and Astronomy, Iowa State University, Ames, Iowa 50011, USA
| | - M C Tringides
- Ames Laboratory-U.S. Department of Energy, Iowa State University, Ames, Iowa 50011, USA and Department of Physics and Astronomy, Iowa State University, Ames, Iowa 50011, USA
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8
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Schuman AW, Bsaibes TS, Schlossman ML. Microphase formation at a 2D solid-gas phase transition. SOFT MATTER 2014; 10:7353-7360. [PMID: 25088351 DOI: 10.1039/c4sm01197j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
Density modulated micro-separated phases (microphases) occur at 2D liquid interfaces in the form of alternating regions of high and low density domains. Brewster angle microscopy (BAM) images demonstrate the existence of microphases in cluster, stripe, and mosaic morphologies at the buried interface between hexane and water with fluoro-alkanol surfactant dissolved in the bulk hexane. At high temperature, the surfactant assembles at the interface in a 2D gaseous state. As the system is cooled additional surfactants condense onto the interface, which undergoes a 2D gas-solid phase transition. Microphase structure is observed within a few degrees of this transition in the form of clusters and labyrinthine stripes. Microphases have been observed previously in a number of other systems; nevertheless, we demonstrate that adsorption transitions at the liquid-liquid interface provide a convenient way to observe a full sequence of temperature-dependent 2D phases, from gas to cluster to stripe to mosaic to inverted stripe phases, as well as coexistence between some of these microphases. Cracking and fracture of the clusters reveal that they are a solid microphase. Theories of microphases often predict a single length scale for cluster and stripe phases as a result of the competition between an attractive and a repulsive interaction. Our observation that two characteristic length scales are required to describe clusters whose diameter is much larger than the stripe period, combined with the solid nature of the clusters, suggests that a long-range elastic interaction is relevant. These results complement earlier X-ray measurements on the same system.
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Affiliation(s)
- Adam W Schuman
- Department of Physics, University of Illinois at Chicago, Chicago, IL 60607, USA.
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9
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Webb EB, Shi B. Early stage spreading: Mechanisms of rapid contact line advance. Curr Opin Colloid Interface Sci 2014. [DOI: 10.1016/j.cocis.2014.10.001] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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10
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Duffy MF, Selvarajah SA, Josling GA, Petter M. Epigenetic regulation of the Plasmodium falciparum genome. Brief Funct Genomics 2013; 13:203-16. [PMID: 24326119 DOI: 10.1093/bfgp/elt047] [Citation(s) in RCA: 45] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Recent research has highlighted some unique aspects of chromatin biology in the malaria parasite Plasmodium falciparum. During its erythrocytic lifecycle P. falciparum maintains its genome primarily as unstructured euchromatin. Indeed there is no clear role for chromatin-mediated silencing of the majority of the developmentally expressed genes in P. falciparum. However discontinuous stretches of heterochromatin are critical for variegated expression of contingency genes that mediate key pathogenic processes in malaria. These range from invasion of erythrocytes and antigenic variation to solute transport and growth adaptation in response to environmental changes. Despite lack of structure within euchromatin the nucleus maintains functional compartments that regulate expression of many genes at the nuclear periphery, particularly genes with clonally variant expression. The typical components of the chromatin regulatory machinery are present in P. falciparum; however, some of these appear to have evolved novel species-specific functions, e.g. the dynamic regulation of histone variants at virulence gene promoters. The parasite also appears to have repeatedly acquired chromatin regulatory proteins through lateral transfer from endosymbionts and from the host. P. falciparum chromatin regulators have been successfully targeted with multiple drugs in laboratory studies; hopefully their functional divergence from human counterparts will allow the development of parasite-specific inhibitors.
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11
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Matetskiy AV, Bondarenko LV, Gruznev DV, Zotov AV, Saranin AA, Tringides MC. Structural transformations in Pb/Si(111) phases induced by C₆₀ adsorption. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2013; 25:395006. [PMID: 24013200 DOI: 10.1088/0953-8984/25/39/395006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
Structural transformations at the Pb/Si(111) surface occurring upon C₆₀ adsorption onto Pb/Si(111)1 × 1 phase at room temperature and Pb/Si(111)[Formula: see text] at low temperatures between 30 and 210 K, have been studied using scanning tunneling microscopy and low-energy electron diffraction observations. Typically, C₆₀ fullerenes agglomerate into random molecular islands nucleated at the surface defects. C₆₀ island formation is accompanied by expelling Pb atoms to the surrounding surface area where more dense Pb/Si(111) phases form. Productivity of C₆₀-induced expelling of Pb atoms is controlled by surface defects and is suppressed dramatically when regular ('crystalline') C₆₀ islands self-assemble at the defect-free Pb/Si(111) surface. When Pb atoms are ejected by the random C₆₀ islands, extended structural transformations involving reordering of numerous Pb atoms are fully completed at the surface within the shortest possible time (a few dozen seconds) to reapproach and image the surface after C₆₀ deposition. Estimations show that the observed transformations cannot be controlled by random walk diffusion of Pb adatoms, which implies a highly correlated motion of the Pb atom displacements within the layer.
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Affiliation(s)
- A V Matetskiy
- Institute of Automation and Control Processes FEB RAS, 690041 Vladivostok, Russia. School of Natural Sciences, Far Eastern Federal University, 690950 Vladivostok, Russia
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12
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Zhang G, Sun J, Jin Y, Zang K, Guo F, Yang X. A Compact Low Energy Electron Microscope for Surface Analysis. CHINESE J CHEM PHYS 2013. [DOI: 10.1063/1674-0068/26/04/369-373] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
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13
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Schumacher S, Förster DF, Rösner M, Wehling TO, Michely T. Strain in epitaxial graphene visualized by intercalation. PHYSICAL REVIEW LETTERS 2013; 110:086111. [PMID: 23473177 DOI: 10.1103/physrevlett.110.086111] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/11/2012] [Indexed: 06/01/2023]
Abstract
Intercalation of Eu under graphene on Ir(111) results in patterns oriented along the graphene moiré and quantized in size by its unit mesh. The patterns are formed by stripes, compact islands, and channels. Over a wide range of intercalated amounts the step concentration of the pattern has a rather constant saturation value. These findings are explained by the chemically modulated binding of graphene to the substrate and the preexisting strain in graphene due to its cooldown from the growth temperature. Local variations in the intercalation step density appear to reflect local variations in the preexisting strain.
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Affiliation(s)
- Stefan Schumacher
- II Physikalisches Institut, Universität zu Köln, Zülpicher Straße 77, 50937 Köln, Germany.
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14
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Man KL, Tringides MC, Loy MMT, Altman MS. Superdiffusive motion of the Pb wetting layer on the Si(111) surface. PHYSICAL REVIEW LETTERS 2013; 110:036104. [PMID: 23373939 DOI: 10.1103/physrevlett.110.036104] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2012] [Indexed: 06/01/2023]
Abstract
Mass transport in the Pb wetting layer on the Si(111) surface is investigated by observing nonequilibrium coverage profile evolution with low energy electron microscopy and microlow energy electron diffraction. Equilibration of an initial coverage step profile occurs by the exchange of mass between oppositely directed steep coverage gradients that each move with unperturbed shape. The bifurcation of the initial profile, the shape of the profile between the two moving edges, and the time dependence of equilibration are all at odds with expectations for classical diffusion behavior. These observations signal a very unusual coverage dependence of diffusion or may even reveal an exceptional collective superdiffusive mechanism.
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Affiliation(s)
- K L Man
- Department of Physics, Hong Kong University of Science and Technology, Kowloon, Hong Kong, China
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15
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Lin CL, Wu AW, Wang YC, Tseng YC, Tsay JS. Spin reorientation transitions and structures of electrodeposited Ni/Cu(100) ultrathin films with and without Pb additives. Phys Chem Chem Phys 2013; 15:2360-7. [PMID: 23295646 DOI: 10.1039/c2cp42833d] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Magnetic properties and surface structures of Ni/Cu(100) ultrathin films are studied by means of magneto-optical Kerr effect and in situ scanning tunneling microscopy in combination with cyclic voltammetry. At the initial stage of Ni deposition on a Cu(100) electrode, nickel atoms attach onto the steps and the surface shows single atomic steps corresponding to a layer-by-layer growth. For thicker Ni/Cu(100) films, nanometer-size clusters are randomly distributed on the surface showing a three-dimensional island growth. For thinner Ni layers in the coherent region, the magnetic anisotropy energy of the Cl-electrolyte/Ni interface is small. The reduction of squareness of the hysteresis loops is related to the inhomogeneous growth of the Ni layers. For thicker Ni layers in the incoherent region, the negative value of interface anisotropy for the Cl-electrolyte/Ni interface has a strong impact on perpendicular magnetic anisotropy and plays an important role on the reduction of the Ni thickness for spin reorientation transition in the electrolyte condition. By adding Pb additives, the deposition of a Pb wetting layer causes a defaceting phenomenon and the hydrogen evolution reaction is reduced. As the Ni thickness increases, the growth of Ni changes from layer-by-layer to quasi-two-dimensional islands with a flat top layer. With a Pb additive, the spin reorientation transitions of the Ni/Cu(100) system are not significantly influenced. However, due to the change of the growth mode by Pb atoms as a surfactant, the squareness of the hysteresis loops is enhanced for all the Ni thicknesses.
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Affiliation(s)
- Chun-Liang Lin
- Department of Physics, National Taiwan Normal University, 88, Section 4, Ting-Chou Road, Taipei 11677, Taiwan
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16
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van Gastel R, Kaminski D, Vlieg E, Poelsema B. Phase transition driven discontinuity in thermodynamic size selection. PHYSICAL REVIEW LETTERS 2012; 109:195501. [PMID: 23215397 DOI: 10.1103/physrevlett.109.195501] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2012] [Indexed: 06/01/2023]
Abstract
We show how an order-disorder phase transition in a two-dimensional system can discontinuously alter the shape and size of stress-stabilized self-assembled nanostructures. Low energy electron microscopy was used to study the dealloying of the Cu(111)-sqrt[3]×sqrt[3]-R30°-Bi surface alloy. The gradual expulsion of embedded bismuth from the alloy with increasing temperature induces a hard-hexagon-type order-disorder transition in the surface alloy. Our low energy electron microscopy results demonstrate how the loss of long-range order induces enormous changes in the domain patterns that the alloy forms with a Bi overlayer phase. We propose that the occurrence of phase transitions in one of the two surface phases that constitute a self-assembled domain pattern, provides a general, largely unexplored, mechanism that can be used to influence the morphological details of two-dimensional nanostructures.
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Affiliation(s)
- R van Gastel
- Physics of Interfaces and Nanomaterials, MESA Institute for Nanotechnology, University of Twente, PO Box 217, 7500 AE Enschede, The Netherlands
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17
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Zhao Z, Lu W. Spontaneous propagation of self-assembly in a continuous medium. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2012; 85:041124. [PMID: 22680436 DOI: 10.1103/physreve.85.041124] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2012] [Indexed: 06/01/2023]
Abstract
We report a mechanism in which self-assembly propagates spontaneously in a continuous medium, enabling the delivery of local order information to distance. In a large stable system a locally self-assembled structure as a precursor destabilizes its surrounding areas through a dipole interaction. The newly formed structures inherit the same order information from the precursor and further activate the self-assembly of their neighbors. This process causes spatial extension of self-assembly and replication of the order, producing extremely long-range ordered superlattice without defects.
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Affiliation(s)
- Zhouzhou Zhao
- Department of Mechanical Engineering, University of Michigan, Ann Arbor, Michigan 48109, USA
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18
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Vlachos DG. Multiscale modeling for emergent behavior, complexity, and combinatorial explosion. AIChE J 2012. [DOI: 10.1002/aic.13803] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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19
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Chen W, Dalach P, Schneider WF, Wolverton C. Interplay between subsurface ordering, surface segregation, and adsorption on Pt-Ti(111) near-surface alloys. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2012; 28:4683-4693. [PMID: 22352380 DOI: 10.1021/la204843q] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
Using the first-principles cluster expansion (CE) method, we studied the subsurface ordering of Pt/Pt-Ti(111) surface alloys and the effect of this ordering on segregation and adsorption behavior. The clusters included in the CE are optimized by a genetic algorithm to better describe the interactions between Pt and Ti atoms in the subsurface layer. Similar to bulk Pt-Ti alloys, Pt-Ti(111) subsurface alloys show a strong ordering tendency. A series of stable ordered Pt-Ti subsurface structures are identified from the two-dimensional (2D) CE. As an indication of the connection between the 2D and the bulk ordering, the CE predicts a ground-state Pt(8)Ti structure in the (111) subsurface layer, which is the same ordering as the close-packed plane of the bulk Pt(8)Ti compound. We carried out Monte Carlo simulations (MC) using the CE Hamiltonian to study the finite temperature stability of the Pt-Ti subsurface structures. The MC results show that subsurface structures in the Pt-rich range have higher order-disorder transition temperatures than their Ti-rich subsurface counterparts. We calculate the binding energy of different adsorbates (O, S, H, and NO) on Pt-terminated and Ti-segregated surfaces of ordered PtTi and Pt(8)Ti subsurface alloys. The binding of these adsorbates is generally stronger on Ti-segregated surfaces than Pt-terminated surfaces. The adsorption-induced Ti surface segregation is determined by two factors: (i) the unfavorable energy penalty for the Ti atom to segregate to the clean surface and (ii) the favorable energy decrease from stronger adsorbate binding on the Ti-segregated surface. The two factors introduce similar magnitude in energy change for the S and NO adsorption on Ti-segregated surfaces of PtTi subsurface alloys. We predict an adsorption-induced Ti surface segregation that is dependent on the atomic configurations of the Ti-segregated surfaces resulting from the competition of the two factors.
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Affiliation(s)
- Wei Chen
- Department of Materials Science and Engineering, Northwestern University, Evanston, Illinois 60208, United States.
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20
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Abukhdeir NM, Vlachos DG. Nanoscale surface pattern evolution in heteroepitaxial bimetallic films. ACS NANO 2011; 5:7168-7175. [PMID: 21819095 DOI: 10.1021/nn201979q] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
Nanoscale self-assembly dynamics of submonolayer bimetallic films was studied through simulation of a coarse-grained mesoscopic model. Simulations predict a phase transition sequence (hexagonal→stripe→inverse hexagonal) consistent with experimental observations of Pb/Cu(111) heteroepitaxial growth. Post-transition ordering dynamics of hexagonal and inverse hexagonal patterns was simulated and quantified in order to predict pattern quality and evolution mechanisms. Correlation length scaling laws and nanoscale evolution mechanisms were predicted through simulation of experimentally relevant length (≈1 μm(2)) and time scales, with findings supporting evidence of universal pattern behavior with other hexagonal systems. Results provide detailed dynamics and structure of this novel self-assembly process applicable to the design and optimization of functional bimetallic materials, such as bimetallic catalysts.
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Abstract
Understanding electronic structure at the nanoscale is crucial to untangling fundamental physics puzzles such as phase separation and emergent behavior in complex magnetic oxides. Probes with the ability to see beyond surfaces on nanometer length and subpicosecond time scales can greatly enhance our understanding of these systems and will undoubtedly impact development of future information technologies. Polarized X-rays are an appealing choice of probe due to their penetrating power, elemental and magnetic specificity, and high spatial resolution. The resolution of traditional X-ray microscopes is limited by the nanometer precision required to fabricate X-ray optics. Here we present a novel approach to lensless imaging of an extended magnetic nanostructure, in which a scanned series of dichroic coherent diffraction patterns is recorded and numerically inverted to map its magnetic domain configuration. Unlike holographic methods, it does not require a reference wave or precision optics. In addition, it enables the imaging of samples with arbitrarily large spatial dimensions, at a spatial resolution limited solely by the coherent X-ray flux, wavelength, and stability of the sample with respect to the beam. It can readily be extended to nonmagnetic systems that exhibit circular or linear dichroism. We demonstrate this approach by imaging ferrimagnetic labyrinthine domains in a Gd/Fe multilayer with perpendicular anisotropy and follow the evolution of the domain structure through part of its magnetization hysteresis loop. This approach is scalable to imaging with diffraction-limited resolution, a prospect rapidly becoming a reality in view of the new generation of phenomenally brilliant X-ray sources.
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22
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Zhao Z, Lu W. Growing large nanostructured superlattices from a continuum medium by sequential activation of self-assembly. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2011; 83:041610. [PMID: 21599178 DOI: 10.1103/physreve.83.041610] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/18/2010] [Revised: 02/23/2011] [Indexed: 05/30/2023]
Abstract
We propose a mechanism to grow a large superlattice of phase domains from a continuum homogenous binary film by sequential activation of self-assembly. Self-assembly was initiated in a small mobile region (where atoms could diffuse) to form a seed pattern, and then the mobile region was shifted gradually. This process led to a long-range ordered superlattice regardless whether the seed was perfect or not, since the pattern quickly improved to a perfect superlattice along with the sequential activation. At a bistable state the scanning velocity controlled the type of superlattice. Further exploration led to an intriguing finding that we call the self-activation of self-assembly, a domino effect where the self-assembly in a small region causes a long-range interaction that destabilizes its homogeneous neighbor and triggers the propagation of self-assembly to the entire system.
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Affiliation(s)
- Zhouzhou Zhao
- Department of Mechanical Engineering, University of Michigan, Ann Arbor, Michigan 48109, USA
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23
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Altman MS. Trends in low energy electron microscopy. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2010; 22:084017. [PMID: 21389393 DOI: 10.1088/0953-8984/22/8/084017] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
Low energy electron microscopy (LEEM) and spin polarized LEEM (SPLEEM) are two powerful in situ techniques for the study of surfaces, thin films and other surface-supported nanostructures. Their real-time imaging and complementary diffraction capabilities allow the study of structure, morphology, magnetism and dynamic processes with high spatial and temporal resolution. Progress in methods, instrumentation and understanding of novel contrast mechanisms that derive from the wave nature and spin degree of freedom of the electron continue to advance applications of LEEM and SPLEEM in these areas and beyond. We review here the basic imaging principles and recent developments that demonstrate the current capabilities of these techniques and suggest potential future directions.
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Affiliation(s)
- M S Altman
- Department of Physics, Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong
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24
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Saratz N, Lichtenberger A, Portmann O, Ramsperger U, Vindigni A, Pescia D. Experimental phase diagram of perpendicularly magnetized ultrathin ferromagnetic films. PHYSICAL REVIEW LETTERS 2010; 104:077203. [PMID: 20366912 DOI: 10.1103/physrevlett.104.077203] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2009] [Indexed: 05/29/2023]
Abstract
We image the domain patterns in perpendicularly magnetized ultrathin Fe films on Cu(100) as a function of the temperature T and the applied magnetic field H. Between the low-field stripe phase and the high-field uniform phase we find a bubble phase, consisting of reversed circular domains in a homogeneous background. The curvature of the transition lines in the H-T parameter space is in contrast to the general expectations. The pattern transformations show yet undetected scaling properties.
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Affiliation(s)
- N Saratz
- Laboratory for Solid State Physics, ETH Zurich, 8093 Zurich, Switzerland
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25
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Czeizler E, Kari L. Geometrical tile design for complex neighborhoods. Front Comput Neurosci 2009; 3:20. [PMID: 19956398 PMCID: PMC2786297 DOI: 10.3389/neuro.10.020.2009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2009] [Accepted: 09/22/2009] [Indexed: 11/21/2022] Open
Abstract
Recent research has showed that tile systems are one of the most suitable theoretical frameworks for the spatial study and modeling of self-assembly processes, such as the formation of DNA and protein oligomeric structures. A Wang tile is a unit square, with glues on its edges, attaching to other tiles and forming larger and larger structures. Although quite intuitive, the idea of glues placed on the edges of a tile is not always natural for simulating the interactions occurring in some real systems. For example, when considering protein self-assembly, the shape of a protein is the main determinant of its functions and its interactions with other proteins. Our goal is to use geometric tiles, i.e., square tiles with geometrical protrusions on their edges, for simulating tiled paths (zippers) with complex neighborhoods, by ribbons of geometric tiles with simple, local neighborhoods. This paper is a step toward solving the general case of an arbitrary neighborhood, by proposing geometric tile designs that solve the case of a “tall” von Neumann neighborhood, the case of the f-shaped neighborhood, and the case of a 3 × 5 “filled” rectangular neighborhood. The techniques can be combined and generalized to solve the problem in the case of any neighborhood, centered at the tile of reference, and included in a 3 × (2k + 1) rectangle.
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Affiliation(s)
- Eugen Czeizler
- Department of Computer Science, University of Western Ontario London, ON, Canada.
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Shi F, Sharma P, Gunaratne GH. Creating perfectly ordered quantum dot arrays via self-assembly. CHAOS (WOODBURY, N.Y.) 2009; 19:033141. [PMID: 19792021 DOI: 10.1063/1.3227643] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
Several applications involving quantum dots require perfect long-range ordered arrays. Unfortunately, self-assembly (the choice method to fabricate quantum dots) leads to patterns that, although short range ordered, exhibit defects equivalent to grain boundaries and dislocations on a large scale. We note that rotational invariance of film growth is one reason for formation of defects, and hence study an anisotropic model of quantum dot formation. However, nonlinear stability analysis shows that even in the extreme limit of anisotropy, square arrays whose orientations are in a finite range are linearly stable; consequently structures created in the film continue to have defects. Building on insights developed by the authors earlier on a simpler monolayer self-assembly model, we propose controlling the deposition through a mask to generate ordered quantum dots arrays. General principles to estimate geometrical characteristics of the mask are given. Numerical integration of the model shows that perfectly ordered square arrays of quantum dots can indeed be created using masked deposition.
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Affiliation(s)
- Feng Shi
- Department of Mechanical Engineering, University of Houston, Houston, Texas 77204, USA
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27
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Shi F, Sharma P, Kouri DJ, Hussain F, Gunaratne GH. Nanostructures with long-range order in monolayer self-assembly. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2008; 78:025203. [PMID: 18850882 DOI: 10.1103/physreve.78.025203] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2008] [Revised: 07/10/2008] [Indexed: 05/26/2023]
Abstract
A key ingredient for continued expansion of nanotechnologies is the ability to create perfectly ordered arrays on a small scale with both site and size control. Self-assembly-i.e., the spontaneous formation of nanostructures-is a highly promising alternative to traditional fabrication methods. However, efforts to obtain perfect long-range order via self-assembly have been frustrated in practice as ensuing patterns contain defects. We use an idea based on the fundamental physics of pattern formation to introduce a strategy to consistently obtain perfect patterns.
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Affiliation(s)
- Feng Shi
- Department of Mechanical Engineering, University of Houston, Houston, Texas 77204, USA
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28
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Weber S, Biehl M, Kotrla M, Kinzel W. Simulation of self-assembled nanopatterns in strained 2D alloys on the face centered cubic (111) surface. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2008; 20:265004. [PMID: 21694353 DOI: 10.1088/0953-8984/20/26/265004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
We investigate the formation of nanostructures in 2D strained alloys on face centered cubic (111) surfaces by means of equilibrium Monte Carlo simulations. In the framework of an off-lattice model, we consider one monolayer of two bulk-immiscible adsorbates A and B with negative and positive misfit relative to the substrate, respectively. Simulations show that the adsorbates partly self-organize into island or stripe-like patterns. We show how these structures depend on the relative misfits, interaction, and concentration of components. The morphology is quite different for phase separation and intermixing regimes.
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Affiliation(s)
- S Weber
- Institut für Theoretische Physik und Astrophysik, Universität Würzburg, Am Hubland, 97074 Würzburg, Germany
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29
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Amin M, Frey S, Ozanam F, Chazalviel JN. Macromorphologies in electrochemically formed porous silica. Electrochim Acta 2008. [DOI: 10.1016/j.electacta.2008.01.034] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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30
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Duan JX, Wang H, Huang XT. Synthesis and Characterization of ZnO Ellipsoid-like Nanostructures. CHINESE J CHEM PHYS 2007. [DOI: 10.1088/1674-0068/20/06/613-618] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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31
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Systems tasks in nanotechnology via hierarchical multiscale modeling: Nanopattern formation in heteroepitaxy. Chem Eng Sci 2007. [DOI: 10.1016/j.ces.2006.12.049] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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32
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Yakes M, Hupalo M, Zaluska-Kotur MA, Gortel ZW, Tringides MC. Low-temperature ultrafast mobility in systems with long-range repulsive interactions: Pb/Si(111). PHYSICAL REVIEW LETTERS 2007; 98:135504. [PMID: 17501213 DOI: 10.1103/physrevlett.98.135504] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2006] [Indexed: 05/15/2023]
Abstract
A realization of the numerous phases predicted in systems with long-range repulsive interactions was recently found in Pb/Si(111). Surprisingly, these numerous phases can be grown at low temperatures approximately 40 K over macroscopic distances. This unusual observation can be explained from theoretical calculations of the collective diffusion coefficient D(c) in systems with long-range repulsive interactions. Instead of a gradual dependence of D(c) on coverage, it was found that D(c) has sharp maxima at low temperatures for every stable phase (i.e., for every rational value of the coverage theta=p/q) in agreement with the experiment.
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Affiliation(s)
- M Yakes
- Department of Physics, Iowa State University, Ames, IA 50011, USA
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33
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Helveg S, Li WX, Bartelt NC, Horch S, Laegsgaard E, Hammer B, Besenbacher F. Role of surface elastic relaxations in an O-induced nanopattern on Pt(110)-(1 x 2). PHYSICAL REVIEW LETTERS 2007; 98:115501. [PMID: 17501062 DOI: 10.1103/physrevlett.98.115501] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/2006] [Indexed: 05/15/2023]
Abstract
Scanning tunneling microscopy shows that a nanopattern forms as the Pt(110)-(1 x 2) surface is exposed to oxygen at room temperature or above. The nanopattern consists of [11[over]0] oriented O-induced stripes assembling into a (11 x 2) superstructure at high O coverage. The stripes form because the O adsorption energy increases by expanding the Pt lattice along the ridges of the surface as compared to the bulk. From interplay with density functional theory calculations, we show that the O-induced nanoscale periodicity is caused by short-ranged elastic relaxations confined to the surface.
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Affiliation(s)
- S Helveg
- Department of Physics and Astronomy, Interdisciplinary Nanoscience Center (iNANO), University of Aarhus, DK-8000 Aarhus C, Denmark
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34
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Anderson ML, Bartelt NC, Feibelman PJ, Swartzentruber BS, Kellogg GL. How Pb-overlayer islands move fast enough to self-assemble on Pb-Cu surface alloys. PHYSICAL REVIEW LETTERS 2007; 98:096106. [PMID: 17359178 DOI: 10.1103/physrevlett.98.096106] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2006] [Indexed: 05/14/2023]
Abstract
Low-energy electron microscopy reveals that two-dimensional, approximately 50 000 atom, Pb-overlayer and vacancy islands both have diffusion coefficients of 25.6+/-0.8 nm2/sec at 400 degrees C on Pb-Cu surface alloys. This high mobility, key to self-assembly in this system, results from the fast transport of Pb atoms on the surface alloy and of Cu through the Pb overlayer. A high Pb vacancy concentration, predicted by ab initio calculations, facilitates the latter.
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Affiliation(s)
- M L Anderson
- Sandia National Laboratories, Albuquerque, New Mexico 87185, USA
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35
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Liu X, Lu B, Iimori T, Nakatsuji K, Komori F. Self-assembled MnN superstructure. PHYSICAL REVIEW LETTERS 2007; 98:066103. [PMID: 17358959 DOI: 10.1103/physrevlett.98.066103] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/03/2006] [Indexed: 05/14/2023]
Abstract
Self-assembled MnN nanoislands have been prepared on Cu(001) substrate. The nanoislands show a square shape and a well-defined size. They are regularly arrayed with a periodicity of (3.5+/-0.1) nanometer and form a two-dimensional square superstructure. The MnN island superstructure is stabilized by a short-range mechanism. A structural model has been proposed to explain the self-assembly and the high quality of the superstructure.
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Affiliation(s)
- Xiangdong Liu
- ISSP, University of Tokyo, Kashiwanoha 5-1-5, Kashiwashi, Chiba 277-8581, Japan.
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36
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Tkatchenko A, Batina N. Classification of hexagonal adlayer arrangements by means of collective geometrical properties. J Chem Phys 2006; 125:164702. [PMID: 17092115 DOI: 10.1063/1.2360530] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Unequal-sphere packing model is applied for the simulation of large number of hexagonal adlayer structures with surface coverage between theta=13 and theta=1 on the hexagonal substrate, with atomic radius of the adsorbate and substrate atoms as the only input. Each structure is characterized with respect to collective adlayer properties: the average adlayer height and the adlayer roughness. The distribution of hexagonal arrangements is presented in a special plot, which can be used for identification and characterization of hexagonal adlayers of different surface coverages and atomic registries. The most likely structures are related to the extreme values of our model parameters. The usefulness of this methodology is successfully demonstrated by comparison with some real adsorbate-substrate systems, i.e., halogens and rare gases adsorbed on (111) surface. Besides the agreement with experimental results, our model offers new insight into the formation of atomic adlayers and detailed analysis of the atomic registry. We believe that our approach will be of use for identification of probable structures among the large number of combinatorial possibilities in theoretical studies and for better interpretation of experimental results (i.e., scanning-tunneling microscopy images of atomic adlayers).
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Affiliation(s)
- Alexandre Tkatchenko
- Departamento de Química, División de Ciencias Básicas e Ingeniería, Universidad Autónoma Metropolitana-Iztapalapa, Avenida San Rafael Atlixco 186, Vicentina, AP 55-534, México, Distrito Federal 09340, Mexico
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37
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Vasiljevic N, Dimitrov N, Sieradzki K. Pattern organization on Cu(111) in perchlorate solutions. J Electroanal Chem (Lausanne) 2006. [DOI: 10.1016/j.jelechem.2006.06.013] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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38
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McCarty KF. Deterministic positioning of three-dimensional structures on a substrate by film growth. NANO LETTERS 2006; 6:858-61. [PMID: 16608298 DOI: 10.1021/nl060030l] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
A process to fabricate three-dimensional crystalline structures at controlled locations on a substrate during film growth and annealing is demonstrated. Low-energy electron microscopy reveals that silver is transported to regions on a tungsten surface with closely spaced atomic steps. By controlling the substrate topography using a focused ion beam to machine small holes, this general mechanism produces an array of cylinders as a silver film dewets the substrate.
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Affiliation(s)
- Kevin F McCarty
- Sandia National Laboratories, Livermore, California 94550, USA.
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39
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Choi BC, Ho J, Arnup G, Freeman MR. Nonequilibrium domain pattern formation in mesoscopic magnetic thin film elements assisted by thermally excited spin fluctuations. PHYSICAL REVIEW LETTERS 2005; 95:237211. [PMID: 16384343 DOI: 10.1103/physrevlett.95.237211] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/03/2005] [Indexed: 05/05/2023]
Abstract
The dynamic behavior in the evolving pattern of thermally assisted, nonequilibrium domains in magnetic thin-film elements undergoing ultrafast 180 degrees magnetization reversal was studied. Magnetization reversal enters a fully dynamic regime when the external field conditions are changed much faster than the sample is able to respond. The dynamic pathway develops a complexity not seen in quasistatic reversal but still retains a high level of order with well-developed dynamic domain patterns formed in response to subnanosecond transitions of the external applied magnetic field.
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Affiliation(s)
- B C Choi
- Department of Physics and Astronomy, University of Victoria, Victoria, BC, Canada
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40
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Asciutto E, Roland C, Sagui C. Self-assembled patterns and strain-induced instabilities for modulated systems. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2005; 72:021504. [PMID: 16196570 DOI: 10.1103/physreve.72.021504] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/24/2005] [Indexed: 05/04/2023]
Abstract
The self-assembled domain patterns of modulated systems are characteristic of a wide variety of chemical and physical systems, and are the result of competing interactions. From a technological point of view, there is considerable interest in these domain patterns, as they form suitable templates for the fabrication of nanostructures. We have analyzed the domains and instabilities that form in modulated systems, and show that a large variety of patterns--based on long-lived metastable or glassy states--may be formed as a compromise between the required equilibrium modulation period and the strain present in the system. The strain results from topologically constrained trajectories in phase space, that effectively preclude the equilibrium configuration.
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Affiliation(s)
- Eliana Asciutto
- Center for High Performance Simulations and Department of Physics, The North Carolina State University, Raleigh, North Carolina 27695-8202 USA
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41
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Lu W, Salac D. Patterning multilayers of molecules via self-organization. PHYSICAL REVIEW LETTERS 2005; 94:146103. [PMID: 15904081 DOI: 10.1103/physrevlett.94.146103] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2004] [Indexed: 05/02/2023]
Abstract
The electric dipole interaction among adsorbate molecules may cause them to form regular nanopatterns. In a multilayer system, the self-organization of each layer is also influenced by the underlying layers. This Letter develops a phase field model to simulate the molecular patterning process. The study reveals self-alignment, scaling down of size, and the effect of guided self-assembly with embedded electrodes.
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Affiliation(s)
- Wei Lu
- Department of Mechanical Engineering, University of Michigan, Ann Arbor, Michigan 48109, USA
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42
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Sagui C, Asciutto E, Roland C. New and exotic self-organized patterns for modulated nanoscale systems. NANO LETTERS 2005; 5:389-395. [PMID: 15794631 DOI: 10.1021/nl048224t] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
The self-assembled domain patterns of modulated systems are the result of competing short-range attractive and long-range repulsive interactions found in diverse physical and chemical systems. From an application point of view, there is considerable interest in these domain patterns, as they form templates suitable for the fabrication of nanostructures. In this work we have generated a variety of new and exotic patterns, which represent either metastable or glassy states. These patterns arise as a compromise between the required equilibrium modulation period and the strain resulting from topologically constrained trajectories in phase space that effectively preclude the equilibrium configuration.
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Affiliation(s)
- Celeste Sagui
- Center for High Performance Simulation and Department of Physics, The North Carolina State University, Raleigh, NC 27695-8202, USA.
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43
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Nakanishi S, Sakai SI, Nagai T, Nakato Y. Macroscopically Uniform Nanoperiod Alloy Multilayers Formed by Coupling of Electrodeposition with Current Oscillations. J Phys Chem B 2005; 109:1750-5. [PMID: 16851154 DOI: 10.1021/jp045876x] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The electrodeposition from an acidic solution containing Cu(2+), Sn(2+), and a cationic surfactant gave a negative differential resistance (NDR) and a current oscillation in a narrow potential region of about 20 mV lying slightly more negative than the onset potential for Sn-Cu alloy deposition. Scanning Auger microscopic inspection has indicated that alloy films deposited during the oscillation have a clear alternate multilayer structure composed of two alloy layers of different compositions. The multilayer had the period of thickness of 40-90 nm and was uniform over a macroscopically wide area of about 1 mm x 1 mm. Detailed investigations have revealed that the NDR arises from adsorption of a cationic surfactant (acting as an inhibitor for diffusion of metal ions) on the alloy surface, and the oscillation comes from coupling of the NDR with the ohmic drop in the electrolyte.
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Affiliation(s)
- Shuji Nakanishi
- Division of Chemistry, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
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44
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Schneider KS, Lu W, Owens TM, Fosnacht DR, Holl MMB, Orr BG. Monolayer pattern evolution via substrate strain-mediated spinodal decomposition. PHYSICAL REVIEW LETTERS 2004; 93:166104. [PMID: 15525009 DOI: 10.1103/physrevlett.93.166104] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/25/2003] [Indexed: 05/24/2023]
Abstract
Investigations of octylsilane (C8H17SiH3) monolayer pattern formation on Au(111) are reported. Scanning tunneling microscopy data display the evolution of a approximately 6 nm scale pattern of interwoven features concomitant with ejection of surface Au atoms and relaxation of the Au(111) 23xsqrt[3] surface reconstruction. Numerical simulations suggest the surface dynamics are governed by a substrate strain-mediated spinodal decomposition mechanism, novel to organic monolayer formation. Collectively, the experimental and theoretical data indicate strain-inducing Si-Au bond interactions drive the pattern formation and the alkyl chains play a negligible role.
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Affiliation(s)
- Kevin S Schneider
- Chemistry Department, The University of Michigan, Ann Arbor, Michigan 48109-1055, USA
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45
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Mehrotra R, Kumar D. Patterns in melting snow and vapor deposited layers. PHYSICAL REVIEW LETTERS 2004; 92:254502. [PMID: 15245014 DOI: 10.1103/physrevlett.92.254502] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/27/2003] [Indexed: 05/24/2023]
Abstract
We have observed a natural periodic pattern occurring in partially melted snow lying on the ground under certain atmospheric conditions. We explain this phenomenon quantitatively by considering heat flow through this layer coexisting in two phases (snow and water). Our model equations exhibit a range of patterns depending on the average density of snow. Strikingly similar patterns have been observed by Plass and co-workers in monolayer depositions of Pb on heated PbCu substrates. We argue that the physics of the two phenomena, differing in length scales by 7 orders of magnitude, is similar.
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Affiliation(s)
- Ravi Mehrotra
- National Physical Laboratory, K. S. Krishnan Marg, New Delhi-110012, India.
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46
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Suo Z, Hong W. Programmable motion and patterning of molecules on solid surfaces. Proc Natl Acad Sci U S A 2004; 101:7874-9. [PMID: 15138299 PMCID: PMC419524 DOI: 10.1073/pnas.0308254101] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2003] [Indexed: 11/18/2022] Open
Abstract
Adsorbed on a solid surface, a molecule can migrate and carry an electric dipole moment. A nonuniform electric field can direct the motion of the molecule. A collection of the same molecules may aggregate into a monolayer island on the solid surface. Place such molecules on a dielectric substrate surface, beneath which an array of electrodes is buried. By varying the voltages of the electrodes individually, it is possible to program molecular patterning, direct an island to move in a desired trajectory, or merge several islands into a larger one. The dexterity may lead to new technologies, such as reconfigurable molecular patterning and programmable molecular cars. This paper develops a phase field model to simulate the molecular motion and patterning under the combined actions of dipole moments, intermolecular forces, entropy, and electrodes.
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Affiliation(s)
- Z Suo
- Division of Engineering and Applied Sciences, Harvard University, Cambridge, MA 02138, USA.
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47
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Li Q, Kwong KW, Ozkaya D, Cockayne DJH. Self-assembled periodical polycrystalline-ZnO/a-C nanolayers on Zn nanowire. PHYSICAL REVIEW LETTERS 2004; 92:186102. [PMID: 15169511 DOI: 10.1103/physrevlett.92.186102] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/17/2003] [Indexed: 05/24/2023]
Abstract
Zn nanowires with an epitaxial thin surface layer of zinc oxide were dispersed onto amorphous carbon films and stored at room temperature. After 1500 h, a self-organized equal-spaced zinc oxide (approximately 2 nm)/carbon (approximately 2.5 nm) multilayer structure was found to form outside the Zn nanowire, taking the place of the original ZnO surface layer. We carried a systematic study to clarify the self-formation mechanism of the periodical multilayers outside the Zn nanowire and found out that such a configuration originated from a chemical reaction between Zn and CO2 and were formed via a gas phase diffusion-interfacial chemical reaction-phase separation process.
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Affiliation(s)
- Quan Li
- Department of Physics, The Chinese University of Hong Kong, Shatin, New Territory, Hong Kong, China.
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48
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Schneider KS, Lu W, Fosnacht DR, Orr BG, Holl MMB. Dynamic in situ characterization of organic monolayer formation via a Novel substrate-mediated mechanism. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2004; 20:1258-1268. [PMID: 15803706 DOI: 10.1021/la0360916] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Ultrahigh vacuum scanning tunneling microscopy data investigating octylsilane (C8H17SiH3) monolayer pattern formation on Au(111) are presented. The irregular monolayer pattern exhibits a 60 A length scale. Formation of the octylsilane monolayer relaxes the Au(111) 23 x square root3 surface reconstruction and ejects surface Au atoms. Au adatom diffusion epitaxially extends the Au(111) crystal lattice via step edge growth and island formation. The chemisorbed monolayer covers the entire Au surface at saturation exposure. Theoretical and experimental data suggest the presence of two octylsilane molecular adsorption phases: an atop site yielding a pentacoordinate Si atom and a surface vacancy site yielding a tetracoordinate Si atom. Theoretical simulations investigating two-phase monolayer self-assembly dynamics on a solid surface suggest pattern formation results from strain-induced spinodal decomposition of the two adsorption phases. Collectively, the theoretical and experimental data indicate octylsilane monolayer pattern formation is a result of interfacial Au-Si interactions and the alkyl chains play a negligible role in the monolayer pattern formation mechanism.
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Affiliation(s)
- Kevin S Schneider
- Chemistry Department, The University of Michigan, Ann Arbor, Michigan 48109-1055, USA
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Webb EB, Grest GS, Heine DR. Precursor film controlled wetting of Pb on Cu. PHYSICAL REVIEW LETTERS 2003; 91:236102. [PMID: 14683202 DOI: 10.1103/physrevlett.91.236102] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2003] [Revised: 10/02/2003] [Indexed: 05/24/2023]
Abstract
Wetting in a system where the kinetics of drop spreading are controlled by the rate of formation of a precursor film is modeled for the first time at the atomistic scale. Molecular dynamics simulations of Pb(l) wetting Cu(111) and Cu(100) show that a precursor film of atomic thickness evolves and spreads diffusively. This precursor film spreads significantly faster on Cu(111) than on Cu(100). For Cu(100), the kinetics of drop spreading are dramatically decreased by slow advancement of the precursor film. Slow precursor film kinetics on Cu(100) are partly due to the formation of a surface alloy at the solid-liquid interface which does not occur on Cu(111).
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Affiliation(s)
- Edmund B Webb
- Sandia National Laboratories, Albuquerque, New Mexico 87185, USA
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