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Effect of Life-History Traits and Habitat Condition on Genetic Diversity between Invasive and Native Plant Populations. DIVERSITY 2022. [DOI: 10.3390/d14121025] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Abstract
Plant invasions have a huge impact on the health of ecosystems and human well-being. The invasion risk varies with the introduction pathway, the propagule pressure, and the genetic diversity of the founding population. We performed a systematic review and meta-analysis of 30 studies reporting the genetic diversity of 31 plant species in their invasive and native ranges. We evaluated if patterns of genetic diversity differ between ranges and whether these responses are influenced by life-history traits, hybridization, polyploidization, and habitat condition. We found that invasive populations had significantly lower genetic diversity and higher inbreeding than native populations. In fragmented and degraded habitats, the genetic diversity of invaders was lower, but inbreeding was not affected. Polyploid invaders with hybrid capacity also showed lower genetic diversity. Invasive herbs with vegetative propagation were more sensitive to the loss of genetic diversity and had higher levels of inbreeding. Our synthesis showed that the genetic response in the invaded range could result from historical processes, such as founder and bottleneck events. Traits such as selfing are more likely to preserve the signatures of founder events and influence the genetic diversity in invasive populations. Additionally, clonality seems to be the predominant reproduction system in the invaded range.
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Cisternas‐Fuentes A, Jogesh T, Broadhead GT, Raguso RA, Skogen KA, Fant JB. Evolution of selfing syndrome and its influence on genetic diversity and inbreeding: A range-wide study in Oenothera primiveris. AMERICAN JOURNAL OF BOTANY 2022; 109:789-805. [PMID: 35596689 PMCID: PMC9320852 DOI: 10.1002/ajb2.1861] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/04/2021] [Revised: 03/09/2022] [Accepted: 03/11/2022] [Indexed: 06/15/2023]
Abstract
PREMISE To avoid inbreeding depression, plants have evolved diverse breeding systems to favor outcrossing, such as self-incompatibility. However, changes in biotic and abiotic conditions can result in selective pressures that lead to a breakdown in self-incompatibility. The shift to increased selfing is commonly associated with reduced floral features, lower attractiveness to pollinators, and increased inbreeding. We tested the hypothesis that the loss of self-incompatibility, a shift to self-fertilization (autogamy), and concomitant evolution of the selfing syndrome (reduction in floral traits associated with cross-fertilization) will lead to increased inbreeding and population differentiation in Oenothera primiveris. Across its range, this species exhibits a shift in its breeding system and floral traits from a self-incompatible population with large flowers to self-compatible populations with smaller flowers. METHODS We conducted a breeding system assessment, evaluated floral traits in the field and under controlled conditions, and measured population genetic parameters using RADseq data. RESULTS Our results reveal a bimodal transition to the selfing syndrome from the west to the east of the range of O. primiveris. This shift includes variation in the breeding system and the mating system, a reduction in floral traits (flower diameter, herkogamy, and scent production), a shift to greater autogamy, reduced genetic diversity, and increased inbreeding. CONCLUSIONS The observed variation highlights the importance of range-wide studies to understand breeding system variation and the evolution of the selfing syndrome within populations and species.
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Affiliation(s)
- Anita Cisternas‐Fuentes
- Negaunee Institute for Plant Conservation Science and ActionChicago Botanic Garden1000 Lake Cook RoadGlencoeIllinois60035USA
- Plant Biology and ConservationNorthwestern University2205 Tech DriveEvanstonIllinois60208USA
- Department of Biological ScienceClemson University132 Long HallClemsonSouth Carolina29631USA
| | - Tania Jogesh
- Negaunee Institute for Plant Conservation Science and ActionChicago Botanic Garden1000 Lake Cook RoadGlencoeIllinois60035USA
| | - Geoffrey T. Broadhead
- Department of Entomology and NematologyUniversity of Florida1881 Natural Area DriveGainesvilleFlorida32611USA
| | - Robert A. Raguso
- Department of Neurobiology and BehaviorCornell UniversityW361 Mudd HallIthacaNew York14853USA
| | - Krissa A. Skogen
- Negaunee Institute for Plant Conservation Science and ActionChicago Botanic Garden1000 Lake Cook RoadGlencoeIllinois60035USA
- Plant Biology and ConservationNorthwestern University2205 Tech DriveEvanstonIllinois60208USA
| | - Jeremie B. Fant
- Negaunee Institute for Plant Conservation Science and ActionChicago Botanic Garden1000 Lake Cook RoadGlencoeIllinois60035USA
- Plant Biology and ConservationNorthwestern University2205 Tech DriveEvanstonIllinois60208USA
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Parveen S, Singh N, Adit A, Kumaria S, Tandon R, Agarwal M, Jagannath A, Goel S. Contrasting Reproductive Strategies of Two Nymphaea Species Affect Existing Natural Genetic Diversity as Assessed by Microsatellite Markers: Implications for Conservation and Wetlands Restoration. FRONTIERS IN PLANT SCIENCE 2022; 13:773572. [PMID: 35371128 PMCID: PMC8965595 DOI: 10.3389/fpls.2022.773572] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/10/2021] [Accepted: 02/03/2022] [Indexed: 06/14/2023]
Abstract
Nymphaea, commonly known as water lily, is the largest and most widely distributed genus in the order Nymphaeales. The importance of Nymphaea in wetland ecosystems and their increased vulnerability make them a great choice for conservation and management. In this work, we studied genetic diversity in a collection of 90 N. micrantha and 92 N. nouchali individuals from six different states of India, i.e., Assam, Manipur, Meghalaya, Maharashtra, Goa, and Kerala, using simple sequence repeat (SSR) markers developed by low throughput Illumina sequencing (10X coverage of genome) of N. micrantha. Nymphaea nouchali is native to India, whereas N. micrantha is suggested to be introduced to the country for its aesthetic and cultural values. The study revealed extensive polymorphism in N. nouchali, while in N. micrantha, no apparent genetic divergence was detected prompting us to investigate the reason(s) by studying the reproductive biology of the two species. The study revealed that N. micrantha predominantly reproduces asexually which has impacted the genetic diversity of the species to a great extent. This observation is of immense importance for a successful re-establishment of Nymphaea species during restoration programs of wetlands. The information generated on reproductive behaviors and their association with genotypic richness can help in strategizing genetic resource conservation, especially for species with limited distribution. The study has also generated 22,268 non-redundant microsatellite loci, out of which, 143 microsatellites were tested for polymorphism and polymorphic markers were tested for transferability in five other Nymphaea species, providing genomic resources for further studies on this important genus.
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Affiliation(s)
- Seema Parveen
- Department of Botany, University of Delhi, New Delhi, India
| | - Nutan Singh
- Department of Botany, North-Eastern Hill University, Shillong, India
| | - Arjun Adit
- Department of Botany, University of Delhi, New Delhi, India
| | - Suman Kumaria
- Department of Botany, North-Eastern Hill University, Shillong, India
| | - Rajesh Tandon
- Department of Botany, University of Delhi, New Delhi, India
| | - Manu Agarwal
- Department of Botany, University of Delhi, New Delhi, India
| | - Arun Jagannath
- Department of Botany, University of Delhi, New Delhi, India
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Urquía D, Gutierrez B, Pozo G, Pozo MJ, Torres MDL. Origin and dispersion pathways of guava in the Galapagos Islands inferred through genetics and historical records. Ecol Evol 2021; 11:15111-15131. [PMID: 34765164 PMCID: PMC8571588 DOI: 10.1002/ece3.8193] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2021] [Revised: 07/07/2021] [Accepted: 09/16/2021] [Indexed: 11/23/2022] Open
Abstract
Guava (Psidium guajava) is an aggressive invasive plant in the Galapagos Islands. Determining its provenance and genetic diversity could explain its adaptability and spread, and how this relates to past human activities. With this purpose, we analyzed 11 SSR markers in guava individuals from Isabela, Santa Cruz, San Cristobal, and Floreana islands in the Galapagos, as well as from mainland Ecuador. The mainland guava population appeared genetically differentiated from the Galapagos populations, with higher genetic diversity levels found in the former. We consistently found that the Central Highlands region of mainland Ecuador is one of the most likely origins of the Galapagos populations. Moreover, the guavas from Isabela and Floreana show a potential genetic input from southern mainland Ecuador, while the population from San Cristobal would be linked to the coastal mainland regions. Interestingly, the proposed origins for the Galapagos guava coincide with the first human settlings of the archipelago. Through approximate Bayesian computation, we propose a model where San Cristobal was the first island to be colonized by guava from the mainland, and then, it would have spread to Floreana and finally to Santa Cruz; Isabela would have been seeded from Floreana. An independent trajectory could also have contributed to the invasion of Floreana and Isabela. The pathway shown in our model agrees with the human colonization history of the different islands in the Galapagos. Our model, in conjunction with the clustering patterns of the individuals (based on genetic distances), suggests that guava introduction history in the Galapagos archipelago was driven by either a single event or a series of introduction events in rapid succession. We thus show that genetic analyses supported by historical sources can be used to track the arrival and spread of invasive species in novel habitats and the potential role of human activities in such processes.
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Affiliation(s)
- Diego Urquía
- Laboratorio de Biotecnología VegetalUniversidad San Francisco de Quito (USFQ)QuitoEcuador
| | - Bernardo Gutierrez
- Laboratorio de Biotecnología VegetalUniversidad San Francisco de Quito (USFQ)QuitoEcuador
- Department of ZoologyUniversity of OxfordOxfordUK
| | - Gabriela Pozo
- Laboratorio de Biotecnología VegetalUniversidad San Francisco de Quito (USFQ)QuitoEcuador
| | - Maria Jose Pozo
- Laboratorio de Biotecnología VegetalUniversidad San Francisco de Quito (USFQ)QuitoEcuador
| | - Maria de Lourdes Torres
- Laboratorio de Biotecnología VegetalUniversidad San Francisco de Quito (USFQ)QuitoEcuador
- Galapagos Science CenterUniversidad San Francisco de Quito and University of North Carolina at Chapel HillGalapagosEcuador
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Roux C, Pannell JR. The opposing effects of genetic drift and Haldane's sieve on floral-morph frequencies in tristylous metapopulations. THE NEW PHYTOLOGIST 2019; 224:1229-1240. [PMID: 31505031 PMCID: PMC6856859 DOI: 10.1111/nph.16187] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/21/2019] [Accepted: 08/01/2019] [Indexed: 06/10/2023]
Abstract
Tristyly is a genetic floral polymorphism in which three floral morphs are maintained at equal frequencies by negative frequency-dependent selection on alleles at two interacting loci. Because dominant alleles at these loci are maintained at a lower frequency than their recessive counterparts, they are more likely to be lost by founder events and genetic drift. Here we examine the hypothesis that dominant alleles under negative frequency-dependent selection should also be more likely to re-invade populations than recessive alleles, due to Haldane's Sieve, because recessive alleles not expressed in a heterozygote state cannot benefit from positive selection when rare. We used computer simulations of tristylous metapopulations to verify that Haldane's Sieve acting on migrants into occupied demes can indeed reverse the bias in allele frequencies expected for small single tristylous populations, particularly in situations of rapid population growth following colonisation. This effect is manifest both locally and at the metapopulation level. Our study illustrates the potential effect of Haldane's Sieve in the novel context of an iconic plant sexual-system polymorphism under the influence of metapopulation dynamics.
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Affiliation(s)
- Camille Roux
- CNRSUMR 8198 – Evo‐Eco‐PaleoUniv. LilleLilleF‐59000France
| | - John R. Pannell
- Department of Ecology and EvolutionUniversity of LausanneLausanne1015Switzerland
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Husband BC, Barrett SCH. EFFECTIVE POPULATION SIZE AND GENETIC DRIFT IN TRISTYLOUSEICHHORNIA PANICULATA(PONTEDERIACEAE). Evolution 2017; 46:1875-1890. [DOI: 10.1111/j.1558-5646.1992.tb01175.x] [Citation(s) in RCA: 58] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/1991] [Accepted: 02/22/1992] [Indexed: 10/19/2022]
Affiliation(s)
- Brian C. Husband
- Department of Botany; University of Toronto; Toronto Ontario M5S 3B2 Canada
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8
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Latta R, Ritland K. THE RELATIONSHIP BETWEEN INBREEDING DEPRESSION AND PRIOR INBREEDING AMONG POPULATIONS OF FOUR MIMULUS
TAXA. Evolution 2017; 48:806-817. [DOI: 10.1111/j.1558-5646.1994.tb01363.x] [Citation(s) in RCA: 47] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/1992] [Accepted: 07/12/1993] [Indexed: 11/28/2022]
Affiliation(s)
- Robert Latta
- Department of Botany; University of Toronto; Toronto Ontario M5S 3B2 Canada
| | - Kermit Ritland
- Department of Botany; University of Toronto; Toronto Ontario M5S 3B2 Canada
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Ingvarsson PK, Giles BE. KIN-STRUCTURED COLONIZATION AND SMALL-SCALE GENETIC DIFFERENTIATION IN SILENE DIOICA. Evolution 2017; 53:605-611. [DOI: 10.1111/j.1558-5646.1999.tb03795.x] [Citation(s) in RCA: 47] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/1998] [Accepted: 12/07/1998] [Indexed: 11/27/2022]
Affiliation(s)
- Par K. Ingvarsson
- Department of Zoology; University of British Columbia; Vancouver British Columbia V6T 1Z4 Canada
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Genetic and allelopathic differences between populations of daisy fleabane Erigeron annuus (L.) Pers. (Asteraceae) from disturbed and stable habitats. BIOCHEM SYST ECOL 2017. [DOI: 10.1016/j.bse.2016.12.015] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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Zhu BR, Barrett SCH, Zhang DY, Liao WJ. Invasion genetics of Senecio vulgaris: loss of genetic diversity characterizes the invasion of a selfing annual, despite multiple introductions. Biol Invasions 2016. [DOI: 10.1007/s10530-016-1277-0] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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12
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Cornille A, Salcedo A, Kryvokhyzha D, Glémin S, Holm K, Wright SI, Lascoux M. Genomic signature of successful colonization of Eurasia by the allopolyploid shepherd's purse (Capsella bursa-pastoris). Mol Ecol 2016; 25:616-29. [PMID: 26607306 DOI: 10.1111/mec.13491] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2015] [Revised: 11/18/2015] [Accepted: 11/19/2015] [Indexed: 12/29/2022]
Abstract
Polyploidization is a dominant feature of flowering plant evolution. However, detailed genomic analyses of the interpopulation diversification of polyploids following genome duplication are still in their infancy, mainly because of methodological limits, both in terms of sequencing and computational analyses. The shepherd's purse (Capsella bursa-pastoris) is one of the most common weed species in the world. It is highly self-fertilizing, and recent genomic data indicate that it is an allopolyploid, resulting from hybridization between the ancestors of the diploid species Capsella grandiflora and Capsella orientalis. Here, we investigated the genomic diversity of C. bursa-pastoris, its population structure and demographic history, following allopolyploidization in Eurasia. To that end, we genotyped 261 C. bursa-pastoris accessions spread across Europe, the Middle East and Asia, using genotyping-by-sequencing, leading to a total of 4274 SNPs after quality control. Bayesian clustering analyses revealed three distinct genetic clusters in Eurasia: one cluster grouping samples from Western Europe and Southeastern Siberia, the second one centred on Eastern Asia and the third one in the Middle East. Approximate Bayesian computation (ABC) supported the hypothesis that C. bursa-pastoris underwent a typical colonization history involving low gene flow among colonizing populations, likely starting from the Middle East towards Europe and followed by successive human-mediated expansions into Eastern Asia. Altogether, these findings bring new insights into the recent multistage colonization history of the allotetraploid C. bursa-pastoris and highlight ABC and genotyping-by-sequencing data as promising but still challenging tools to infer demographic histories of selfing allopolyploids.
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Affiliation(s)
- A Cornille
- Department of Ecology and Genetics, Evolutionary Biology Centre, Science for life Laboratory, Uppsala University, Uppsala 75236, Sweden
| | - A Salcedo
- Department of Ecology and Evolutionary Biology, University of Toronto, 25 Willcocks St., Toronto, ON M6R 1M3, Canada
| | - D Kryvokhyzha
- Department of Ecology and Genetics, Evolutionary Biology Centre, Science for life Laboratory, Uppsala University, Uppsala 75236, Sweden
| | - S Glémin
- Department of Ecology and Genetics, Evolutionary Biology Centre, Science for life Laboratory, Uppsala University, Uppsala 75236, Sweden
| | - K Holm
- Department of Ecology and Genetics, Evolutionary Biology Centre, Science for life Laboratory, Uppsala University, Uppsala 75236, Sweden
| | - S I Wright
- Department of Ecology and Evolutionary Biology, University of Toronto, 25 Willcocks St., Toronto, ON M6R 1M3, Canada
| | - M Lascoux
- Department of Ecology and Genetics, Evolutionary Biology Centre, Science for life Laboratory, Uppsala University, Uppsala 75236, Sweden
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López-Vinyallonga S, Soriano I, Susanna A, Montserra JM, Roquet C, Garcia-Jacas N. The Polyploid Series of the Achillea millefolium Aggregate in the Iberian Peninsula Investigated Using Microsatellites. PLoS One 2015; 10:e0129861. [PMID: 26091537 PMCID: PMC4474640 DOI: 10.1371/journal.pone.0129861] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2014] [Accepted: 05/13/2015] [Indexed: 12/02/2022] Open
Abstract
The Achillea millefolium aggregate is one of the most diverse polyploid complexes of the Northern hemisphere and has its western Eurasian boundary in the Iberian Peninsula. Four ploidy levels have been detected in A. millefolium, three of which have already been found in Iberia (diploid, hexaploid and octoploid), and a fourth (tetraploid) reported during the preparation of this paper. We collected a sample from 26 Iberian populations comprising all ploidy levels, and we used microsatellite markers analyzed as dominant in view of the high ploidy levels. Our goals were to quantify the genetic diversity of A. millefolium in the Iberian Peninsula, to elucidate its genetic structure, to investigate the differences in ploidy levels, and to analyse the dispersal of the species. The lack of spatial genetic structure recovered is linked to both high levels of gene flow between populations and to the fact that most genetic variability occurs within populations. This in turn suggests the existence of a huge panmictic yarrow population in the Iberian Peninsula. This is consistent with the assumption that recent colonization and rapid expansion occurred throughout this area. Likewise, the low levels of genetic variability recovered suggest that bottlenecks and/or founder events may have been involved in this process, and clonal reproduction may have played an important role in maintaining this genetic impoverishment. Indeed, the ecological and phenologic uniformity present in the A. millefolium agg. in Iberia compared to Eurasia and North America may be responsible for the low number of representatives of this complex of species present in the Iberian Peninsula. The low levels of genetic differentiation between ploidy levels recovered in our work suggest the absence of barriers between them.
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Affiliation(s)
| | - Ignasi Soriano
- Department of Plant Biology, University of Barcelona, Barcelona, Spain
| | - Alfonso Susanna
- Botanic Institute of Barcelona (IBB-CSIC-ICUB), Pg. del Migdia, Barcelona, Spain
- * E-mail:
| | - Josep Maria Montserra
- Barcelona Botanical Garden (Consortium of the Museum of Natural History of Barcelona), Barcelona, Spain
| | - Cristina Roquet
- Laboratoire d'Ecologie Alpine, CNRS UMR 5553, Université Grenoble Alpes, Grenoble, France
| | - Núria Garcia-Jacas
- Botanic Institute of Barcelona (IBB-CSIC-ICUB), Pg. del Migdia, Barcelona, Spain
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Ferrero V, Barrett SCH, Castro S, Caldeirinha P, Navarro L, Loureiro J, Rodríguez-Echeverría S. Invasion genetics of the Bermuda buttercup (Oxalis pes-caprae): complex intercontinental patterns of genetic diversity, polyploidy and heterostyly characterize both native and introduced populations. Mol Ecol 2015; 24:2143-55. [DOI: 10.1111/mec.13056] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2014] [Revised: 12/15/2014] [Accepted: 12/20/2014] [Indexed: 01/16/2023]
Affiliation(s)
- Victoria Ferrero
- Department of Ecology and Evolutionary Biology; University of Toronto; 25 Willcocks Street M5S 3B2 Toronto ON Canada
- Department of Plant Biology; Faculty of Science; University of Vigo; As Lagoas-Marcosende 36200 Vigo Spain
| | - Spencer C. H. Barrett
- Department of Ecology and Evolutionary Biology; University of Toronto; 25 Willcocks Street M5S 3B2 Toronto ON Canada
| | - Sílvia Castro
- CFE, Centre for Functional Ecology; Department of Life Sciences; Faculty of Sciences and Technology; University of Coimbra; Calçada Martim de Freitas 3000-456 Coimbra Portugal
| | - Patrícia Caldeirinha
- CFE, Centre for Functional Ecology; Department of Life Sciences; Faculty of Sciences and Technology; University of Coimbra; Calçada Martim de Freitas 3000-456 Coimbra Portugal
| | - Luis Navarro
- Department of Plant Biology; Faculty of Science; University of Vigo; As Lagoas-Marcosende 36200 Vigo Spain
| | - João Loureiro
- CFE, Centre for Functional Ecology; Department of Life Sciences; Faculty of Sciences and Technology; University of Coimbra; Calçada Martim de Freitas 3000-456 Coimbra Portugal
| | - Susana Rodríguez-Echeverría
- CFE, Centre for Functional Ecology; Department of Life Sciences; Faculty of Sciences and Technology; University of Coimbra; Calçada Martim de Freitas 3000-456 Coimbra Portugal
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Barrett SCH. Foundations of invasion genetics: the Baker and Stebbins legacy. Mol Ecol 2015; 24:1927-41. [DOI: 10.1111/mec.13014] [Citation(s) in RCA: 84] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2014] [Revised: 11/17/2014] [Accepted: 11/19/2014] [Indexed: 11/30/2022]
Affiliation(s)
- Spencer C. H. Barrett
- Department of Ecology and Evolutionary Biology; University of Toronto; 25 Willcocks Street Toronto Ontario Canada M5S 3B2
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Matesanz S, Theiss KE, Holsinger KE, Sultan SE. Genetic diversity and population structure in Polygonum cespitosum: insights to an ongoing plant invasion. PLoS One 2014; 9:e93217. [PMID: 24695495 PMCID: PMC3973574 DOI: 10.1371/journal.pone.0093217] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2013] [Accepted: 03/01/2014] [Indexed: 01/28/2023] Open
Abstract
Molecular markers can help elucidate how neutral evolutionary forces and introduction history contribute to genetic variation in invaders. We examined genetic diversity, population structure and colonization patterns in the invasive Polygonum cespitosum, a highly selfing, tetraploid Asian annual introduced to North America. We used nine diploidized polymorphic microsatellite markers to study 16 populations in the introduced range (northeastern North America), via the analyses of 516 individuals, and asked the following questions: 1) Do populations have differing levels of within-population genetic diversity? 2) Do populations form distinct genetic clusters? 3) Does population structure reflect either geographic distances or habitat similarities? We found low heterozygosity in all populations, consistent with the selfing mating system of P. cespitosum. Despite the high selfing levels, we found substantial genetic variation within and among P. cespitosum populations, based on the percentage of polymorphic loci, allelic richness, and expected heterozygosity. Inferences from individual assignment tests (Bayesian clustering) and pairwise FST values indicated high among-population differentiation, which indicates that the effects of gene flow are limited relative to those of genetic drift, probably due to the high selfing rates and the limited seed dispersal ability of P. cespitosum. Population structure did not reflect a pattern of isolation by distance nor was it related to habitat similarities. Rather, population structure appears to be the result of the random movement of propagules across the introduced range, possibly associated with human dispersal. Furthermore, the high population differentiation, genetic diversity, and fine-scale genetic structure (populations founded by individuals from different genetic sources) in the introduced range suggest that multiple introductions to this region may have occurred. High genetic diversity may further contribute to the invasive success of P. cespitosum in its introduced range.
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Affiliation(s)
- Silvia Matesanz
- Área de Biodiversidad y Conservación. Departamento de Biología y Geología, Universidad Rey Juan Carlos, Móstoles, Spain
- * E-mail:
| | - Kathryn E. Theiss
- Biology Department, Willamette University, Salem, Oregon, United States of America
- Department of Ecology & Evolutionary Biology, University of Connecticut, Storrs, Connecticut, United States of America
| | - Kent E. Holsinger
- Department of Ecology & Evolutionary Biology, University of Connecticut, Storrs, Connecticut, United States of America
| | - Sonia E. Sultan
- Biology Department, Wesleyan University, Middletown, Connecticut, United States of America
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Clonal structure and reduced diversity of the invasive alien plant Erigeron annuus in Lithuania. Open Life Sci 2013. [DOI: 10.2478/s11535-013-0206-9] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
AbstractThe alien species Erigeron annuus (L.) Pers. is in an intensive spreading phase in Lithuania. Random amplified polymorphic DNA (RAPDs) and inter-simple sequence repeats (ISSRs) assays were used to study the genetic structure of old and new invasive populations and to determine the most spread genotypes of this species in Lithuania. Pairwise genetic distances between populations established using RAPD and ISSR markers significantly correlated (r=0.91, P<0.05). Our study indicates that there are two genetically different types of E. annuus populations. The first type is represented by a widely spread main clone and related monomorphic populations. The second type is represented by polymorphic populations, some of them present at sites where E. annuus has not been previously observed. Main clone predominates in nine populations and is from the region where this species was first described in natural ecosystems of Lithuania. UPGMA cluster analysis revealed genetic relationships between the main clone and accessions from old cemeteries where E. annuus has been grown as an ornamental plant. We found high genetic differentiation among populations (G
ST=0.58 for RAPDs, G
ST=0.64 for ISSRs). Taken together, our results will contribute to the monitoring of E. annuus spread in Lithuania.
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Santos-Gally R, Pérez-Barrales R, Simón VI, Arroyo J. The role of short-tongued insects in floral variation across the range of a style-dimorphic plant. ANNALS OF BOTANY 2013; 111:317-28. [PMID: 23223205 PMCID: PMC3555527 DOI: 10.1093/aob/mcs261] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/26/2012] [Accepted: 11/07/2012] [Indexed: 05/08/2023]
Abstract
BACKGROUND AND AIMS Heterostyly and related style polymorphisms are suitable model systems to evaluate the importance of functional pollinators in the maintenance of population variability. In Narcissus papyraceus different functional pollinators, incompatibility system and flower morphology have been proposed to influence the maintenance of polymorphism through their effect on disassortative mating. Here a test is done to find out if the visitation rate of long- versus short-tongued pollinators correlates with the morph ratio and if the latter is related to other flower traits of the species across its main geographic range. METHODS Floral traits from 34 populations in the south-west of the Iberian Peninsula and in north-west Africa were measured, perianth variation was described and a comparison was made of allometric relationships between sex organs and floral tube. Correlations between pollinator guilds, stigma-anther separation of reciprocal morphs (our proxy for disassortative mating) and morph-ratio variation were analysed. Finally, the incompatibility system of the species in the northern and southern borders of its distribution are described. KEY RESULTS Flowers from southern populations were significantly larger than flowers from centre and northern populations. The abundance of short-styled plants decreased gradually with increasing distance from the core region (the Strait of Gibraltar), with these disappearing only in the northern range. Although there was a significant difference in stigma-anther separation among populations, morph ratio was not associated with reciprocity or floral tube length. Long-style morph frequency increased with short-tongued pollinator visitation rate. Populations from both edges of the distribution range were self-incompatible and within- and between-morph compatible. CONCLUSIONS The style morph ratio changed gradually, whereas perianth trait variation showed abrupt changes with two morphotypes across the range. The positive relationship between the visitation rate of short-tongued pollinators and the decrease of the short-style morph supports our initial hypothesis. The results highlight the importance of different pollinators in determining the presence of style polymorphism.
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Affiliation(s)
- Rocío Santos-Gally
- Departamento de Biología Vegetal y Ecología, Universidad de Sevilla, Sevilla, Spain.
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Meeus S, Honnay O, Jacquemyn H. Strong differences in genetic structure across disjunct, edge, and core populations of the distylous forest herb Pulmonaria officinalis (Boraginaceae). AMERICAN JOURNAL OF BOTANY 2012; 99:1809-1818. [PMID: 23092991 DOI: 10.3732/ajb.1200223] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
PREMISE OF THE STUDY Populations at the edge of a species' distribution area are often small and have low levels of gene flow resulting in lower genetic variation and higher differentiation compared to core populations. This study examined genetic variation among populations of the distylous temperate forest herb Pulmonaria officinalis located in the core, the edge, and outside the species' main distribution range. METHODS We compared patterns of genetic variation for eight microsatellite loci between disjunct (Belgium), edge (western Germany), and core (eastern Germany) populations of P. officinalis. KEY RESULTS Disjunct populations contained only a subset of alleles found in edge and core populations and had significantly lower within-population genetic variation. No significant differences, however, in within-population genetic variation were found between edge and core populations, except for allelic and genotypic richness. Genetic differentiation was highest among disjunct (F(ST) = 0.11) and lowest among core populations (F(ST) = 0.03). Significant (P < 0.01) isolation by distance was found for disjunct and edge populations (r(M) = 0.29 and 0.50, respectively), but not for core populations (r(M) = 0.18). CONCLUSIONS The results are best interpreted from a "dynamic range" point of view in which the observed low levels of genetic diversity and high genetic differentiation in disjunct populations are best explained through historical processes, most likely the introduction of the species in medieval times. Lower levels of gene flow caused by the pronounced fragmentation of forests in Belgium may further have contributed to the genetic structure of P. officinalis in these disjunct populations.
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Affiliation(s)
- Sofie Meeus
- Plant Conservation and Population Biology, Biology Department, University of Leuven, Kasteelpark Arenberg 31, 3001 Heverlee, Belgium. sofi
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Wang T, Chen G, Zan Q, Wang C, Su YJ. AFLP genome scan to detect genetic structure and candidate loci under selection for local adaptation of the invasive weed Mikania micrantha. PLoS One 2012; 7:e41310. [PMID: 22829939 PMCID: PMC3400595 DOI: 10.1371/journal.pone.0041310] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2011] [Accepted: 06/25/2012] [Indexed: 11/18/2022] Open
Abstract
Why some species become successful invaders is an important issue in invasive biology. However, limited genomic resources make it very difficult for identifying candidate genes involved in invasiveness. Mikania micrantha H.B.K. (Asteraceae), one of the world's most invasive weeds, has adapted rapidly in response to novel environments since its introduction to southern China. In its genome, we expect to find outlier loci under selection for local adaptation, critical to dissecting the molecular mechanisms of invasiveness. An explorative amplified fragment length polymorphism (AFLP) genome scan was used to detect candidate loci under selection in 28 M. micrantha populations across its entire introduced range in southern China. We also estimated population genetic parameters, bottleneck signatures, and linkage disequilibrium. In binary characters, such as presence or absence of AFLP bands, if all four character combinations are present, it is referred to as a character incompatibility. Since character incompatibility is deemed to be rare in populations with extensive asexual reproduction, a character incompatibility analysis was also performed in order to infer the predominant mating system in the introduced M. micrantha populations. Out of 483 AFLP loci examined using stringent significance criteria, 14 highly credible outlier loci were identified by Dfdist and Bayescan. Moreover, remarkable genetic variation, multiple introductions, substantial bottlenecks and character compatibility were found to occur in M. micrantha. Thus local adaptation at the genome level indeed exists in M. micrantha, and may represent a major evolutionary mechanism of successful invasion. Interactions between genetic diversity, multiple introductions, and reproductive modes contribute to increase the capacity of adaptive evolution.
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Affiliation(s)
- Ting Wang
- CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, China
| | - Guopei Chen
- CAS Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, China
- State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, China
| | - Qijie Zan
- Shenzhen Wildlife Rescue and Rehabilitation Center, Shenzhen, China
| | - Chunbo Wang
- State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, China
| | - Ying-juan Su
- State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, Guangzhou, China
- * E-mail:
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Busch JW, Delph LF. The relative importance of reproductive assurance and automatic selection as hypotheses for the evolution of self-fertilization. ANNALS OF BOTANY 2012; 109:553-62. [PMID: 21937484 PMCID: PMC3278291 DOI: 10.1093/aob/mcr219] [Citation(s) in RCA: 123] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/22/2011] [Accepted: 06/24/2011] [Indexed: 05/23/2023]
Abstract
BACKGROUND The field of plant mating-system evolution has long been interested in understanding why selfing evolves from outcrossing. Many possible mechanisms drive this evolutionary trend, but most research has focused upon the transmission advantage of selfing and its ability to provide reproductive assurance when cross-pollination is uncertain. We discuss the shared conceptual framework of these ideas and their empirical support that is emerging from tests of their predictions over the last 25 years. SCOPE These two hypotheses are derived from the same strategic framework. The transmission advantage hypothesis involves purely gene-level selection, with reproductive assurance involving an added component of individual-level selection. Support for both of these ideas has been garnered from population-genetic tests of their predictions. Studies in natural populations often show that selfing increases seed production, but it is not clear if this benefit is sufficient to favour the evolution of selfing, and the ecological agents limiting outcross pollen are often not identified. Pollen discounting appears to be highly variable and important in systems where selfing involves multiple floral adaptations, yet seed discounting has rarely been investigated. Although reproductive assurance appears likely as a leading factor facilitating the evolution of selfing, studies must account for both seed and pollen discounting to adequately test this hypothesis. CONCLUSIONS The transmission advantage and reproductive assurance ideas describe components of gene transmission that favour selfing. Future work should move beyond their dichotomous presentation and focus upon understanding whether selection through pollen, seed or both explains the spread of selfing-rate modifiers in plant populations.
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Affiliation(s)
- Jeremiah W Busch
- School of Biological Sciences, Washington State University, Pullman, WA 99164, USA.
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Distinct invasion sources of common ragweed (Ambrosia artemisiifolia) in Eastern and Western Europe. Biol Invasions 2010. [DOI: 10.1007/s10530-010-9880-y] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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Zhang YY, Zhang DY, Barrett SCH. Genetic uniformity characterizes the invasive spread of water hyacinth (Eichhornia crassipes), a clonal aquatic plant. Mol Ecol 2010; 19:1774-86. [PMID: 20529068 DOI: 10.1111/j.1365-294x.2010.04609.x] [Citation(s) in RCA: 143] [Impact Index Per Article: 10.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Aquatic plant invasions are often associated with long-distance dispersal of vegetative propagules and prolific clonal reproduction. These reproductive features combined with genetic bottlenecks have the potential to severely limit genetic diversity in invasive populations. To investigate this question we conducted a global scale population genetic survey using amplified fragment length polymorphism markers of the world's most successful aquatic plant invader -Eichhornia crassipes (water hyacinth). We sampled 1140 ramets from 54 populations from the native (South America) and introduced range (Asia, Africa, Europe, North America, Central America and the Caribbean). Although we detected 49 clones, introduced populations exhibited very low genetic diversity and little differentiation compared with those from the native range, and approximately 80% of introduced populations were composed of a single clone. A widespread clone ('W') detected in two Peruvian populations accounted for 70.9% of the individuals sampled and dominated in 74.5% of the introduced populations. However, samples from Bangladesh and Indonesia were composed of different genotypes, implicating multiple introductions to the introduced range. Nine of 47 introduced populations contained clonal diversity suggesting that sexual recruitment occurs in some invasive sites where environmental conditions favour seedling establishment. The global patterns of genetic diversity in E. crassipes likely result from severe genetic bottlenecks during colonization and prolific clonal propagation. The prevalence of the 'W' genotype throughout the invasive range may be explained by stochastic sampling, or possibly because of pre-adaptation of the 'W' genotype to tolerate low temperatures.
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Affiliation(s)
- Yuan-Ye Zhang
- MOE Key Laboratory for Biodiversity Science and Ecological Engineering, Beijing Normal University, Beijing 100875, China
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Budde KB, Gallo L, Marchelli P, Mosner E, Liepelt S, Ziegenhagen B, Leyer I. Wide spread invasion without sexual reproduction? A case study on European willows in Patagonia, Argentina. Biol Invasions 2010. [DOI: 10.1007/s10530-010-9785-9] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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Mating-system variation, demographic history and patterns of nucleotide diversity in the Tristylous plant Eichhornia paniculata. Genetics 2009; 184:381-92. [PMID: 19917767 DOI: 10.1534/genetics.109.110130] [Citation(s) in RCA: 71] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022] Open
Abstract
Inbreeding in highly selfing populations reduces effective size and, combined with demographic conditions associated with selfing, this can erode genetic diversity and increase population differentiation. Here we investigate the role that variation in mating patterns and demographic history play in shaping the distribution of nucleotide variation within and among populations of the annual neotropical colonizing plant Eichhornia paniculata, a species with wide variation in selfing rates. We sequenced 10 EST-derived nuclear loci in 225 individuals from 25 populations sampled from much of the geographic range and used coalescent simulations to investigate demographic history. Highly selfing populations exhibited moderate reductions in diversity but there was no significant difference in variation between outcrossing and mixed mating populations. Population size interacted strongly with mating system and explained more of the variation in diversity within populations. Bayesian structure analysis revealed strong regional clustering and selfing populations were highly differentiated on the basis of an analysis of F(st). There was no evidence for a significant loss of within-locus linkage disequilibrium within populations, but regional samples revealed greater breakdown in Brazil than in selfing populations from the Caribbean. Coalescent simulations indicate a moderate bottleneck associated with colonization of the Caribbean from Brazil approximately 125,000 years before the present. Our results suggest that the recent multiple origins of selfing in E. paniculata from diverse outcrossing populations result in higher diversity than expected under long-term equilibrium.
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Barrett SCH, Ness RW, Vallejo-Marín M. Evolutionary pathways to self-fertilization in a tristylous plant species. THE NEW PHYTOLOGIST 2009; 183:546-556. [PMID: 19594695 DOI: 10.1111/j.1469-8137.2009.02937.x] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
Evolutionary transitions from outcrossing to selfing occur commonly in heterostylous genera. The morphological polymorphisms that characterize heterostyly provide opportunities for different pathways for selfing to evolve. Here, we investigate the origins and pathways by which selfing has evolved in tristylous Eichhornia paniculata by providing new evidence based on morphology, DNA sequences and genetic analysis. The primary pathway from outcrossing to selfing involves the stochastic loss of the short-styled morph (S-morph) from trimorphic populations, followed by the spread of selfing variants of the mid-styled morph (M-morph). However, the discovery of selfing variants of the long-styled morph (L-morph) in Central America indicates a secondary pathway and distinct origin for selfing. Comparisons of multi-locus nucleotide sequences from 27 populations sampled from throughout the geographical range suggest multiple transitions to selfing. Genetic analysis of selfing variants of the L- and M-morphs demonstrates recessive control of the loss of herkogamy, although the number of factors appears to differ between the forms. Early stages in the establishment of selfing involve developmental instability in the formation of flowers capable of autonomous self-pollination. The relatively simple genetic control of herkogamy reduction and frequent colonizing episodes may often create demographic conditions favouring transitions to selfing in E. paniculata.
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Affiliation(s)
- Spencer C H Barrett
- Department of Ecology and Evolutionary Biology, University of Toronto, 25 Willcocks St, Toronto, Ontario, Canada, M5S 3B2
| | - Rob W Ness
- Department of Ecology and Evolutionary Biology, University of Toronto, 25 Willcocks St, Toronto, Ontario, Canada, M5S 3B2
| | - Mario Vallejo-Marín
- Department of Ecology and Evolutionary Biology, University of Toronto, 25 Willcocks St, Toronto, Ontario, Canada, M5S 3B2
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Marrs RA, Sforza R, Hufbauer RA. Evidence for multiple introductions of Centaurea stoebe micranthos (spotted knapweed, asteraceae) to North America. Mol Ecol 2009; 17:4197-208. [PMID: 19378400 DOI: 10.1111/j.1365-294x.2008.03903.x] [Citation(s) in RCA: 57] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Invasive species' success may depend strongly on the genetic resources they maintain through the invasion process. We ask how many introductions have occurred in the North American weed Centaurea stoebe micranthos (Asteraceae), and explore whether genetic diversity and population structure have changed as a result of introduction. We surveyed individuals from 15 European native range sites and 11 North American introduced range sites at six polymorphic microsatellite loci. No significant difference existed in the total number of alleles or in the number of private alleles found in each range. Shannon-Weaver diversity of phenotype frequencies was also not significantly different between the ranges, while expected heterozygosity was significantly higher in the invasive range. Population structure was similar between the native range and the invasive range, and isolation by distance was not significant in either range. Traditional assignment methods did not allocate any North American individuals to the sampled European populations, while Bayesian assignment methods grouped individuals into nine genetic clusters, with three of them shared between North America and Europe. Invasive individuals tended to have genetically admixed profiles, while natives tended to assign more strongly to a single cluster. Many North American individuals share assignment with Romania and Bulgaria, suggesting two separate invasions that have undergone gene flow in North America. Samples from three other invasive range sites were genetically distinct, possibly representing three other unique introductions. Multiple introductions and the maintenance of high genetic diversity through the introduction process may be partially responsible for the invasive success of C. stoebe micranthos.
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Affiliation(s)
- R A Marrs
- Department of Bioagricultural Sciences and Pest Management, Campus Delivery 1177, Colorado State University, Fort Collins, CO 80523, USA.
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Henry P, Le Lay G, Goudet J, Guisan A, Jahodová S, Besnard G. Reduced genetic diversity, increased isolation and multiple introductions of invasive giant hogweed in the western Swiss Alps. Mol Ecol 2009; 18:2819-31. [PMID: 19500248 DOI: 10.1111/j.1365-294x.2009.04237.x] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The giant hogweed (Heracleum mantegazzianum) has successfully invaded 19 European countries as well as parts of North America. It has become a problematic species due to its ability to displace native flora and to cause public health hazards. Applying population genetics to species invasion can help reconstruct invasion history and may promote more efficient management practice. We thus analysed levels of genetic variation and population genetic structure of H. mantegazzianum in an invaded area of the western Swiss Alps as well as in its native range (the Caucasus), using eight nuclear microsatellite loci together with plastid DNA markers and sequences. On both nuclear and plastid genomes, native populations exhibited significantly higher levels of genetic diversity compared to invasive populations, confirming an important founder event during the invasion process. Invasive populations were also significantly more differentiated than native populations. Bayesian clustering analysis identified five clusters in the native range that corresponded to geographically and ecologically separated groups. In the invaded range, 10 clusters occurred. Unlike native populations, invasive clusters were characterized by a mosaic pattern in the landscape, possibly caused by anthropogenic dispersal of the species via roads and direct collection for ornamental purposes. Lastly, our analyses revealed four main divergent groups in the western Swiss Alps, likely as a consequence of multiple independent establishments of H. mantegazzianum.
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Affiliation(s)
- P Henry
- Department of Ecology and Evolution, Biophore, University of Lausanne, 1015 Lausanne, Switzerland.
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The role of intraspecific hybridization in the evolution of invasiveness: a case study of the ornamental pear tree Pyrus calleryana. Biol Invasions 2008. [DOI: 10.1007/s10530-008-9386-z] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Affre L, Thompson JD. Population genetic structure and levels of inbreeding depression in the Mediterranean island endemic Cyclamen creticum (Primulaceae). Biol J Linn Soc Lond 2008. [DOI: 10.1111/j.1095-8312.1997.tb01511.x] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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SAKAI SHOKO, WRIGHT SJOSEPH. Reproductive ecology of 21 coexisting Psychotria species (Rubiaceae): when is heterostyly lost? Biol J Linn Soc Lond 2007. [DOI: 10.1111/j.1095-8312.2007.00890.x] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Kudoh H, Nakayama M, Lihová J, Marhold K. Does invasion involve alternation of germination requirements? A comparative study between native and introduced strains of an annual Brassicaceae, Cardamine hirsuta. Ecol Res 2007. [DOI: 10.1007/s11284-007-0417-5] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Besnard G, Henry P, Wille L, Cooke D, Chapuis E. On the origin of the invasive olives (Olea europaea L., Oleaceae). Heredity (Edinb) 2007; 99:608-19. [PMID: 17687251 DOI: 10.1038/sj.hdy.6801037] [Citation(s) in RCA: 63] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Abstract
The olive tree (Olea europaea) has successfully invaded several regions in Australia and Pacific islands. Two olive subspecies (subspp. europaea and cuspidata) were first introduced in these areas during the nineteenth century. In the present study, we determine the origin of invasive olives and investigate the importance of historical effects on the genetic diversity of populations. Four invasive populations from Australia and Hawaii were characterized using eight nuclear DNA microsatellites, plastid DNA markers as well as ITS-1 sequences. Based on these data, their genetic similarity with native populations was investigated, and it was determined that East Australian and Hawaiian populations (subsp. cuspidata) have originated from southern Africa while South Australian populations (subsp. europaea) have mostly derived from western or central Mediterranean cultivars. Invasive populations of subsp. cuspidata showed significant loss of genetic diversity in comparison to a putative source population, and a recent bottleneck was evidenced in Hawaii. Conversely, invasive populations of subsp. europaea did not display significant loss of genetic diversity in comparison to a native Mediterranean population. Different histories of invasion were inferred for these two taxa with multiple cultivars introduced restoring gene diversity for europaea and a single successful founder event and sequential introductions to East Australia and then Hawaii for cuspidata. Furthermore, one hybrid (cuspidata x europaea) was identified in East Australia. The importance of hybridizations in the future evolution of the olive invasiveness remains to be investigated.
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Affiliation(s)
- G Besnard
- Department of Ecology and Evolution, Biophore, University of Lausanne, Lausanne, Switzerland.
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Valliant MT, Mack RN, Novak SJ. Introduction history and population genetics of the invasive grass Bromus tectorum (Poaceae) in Canada. AMERICAN JOURNAL OF BOTANY 2007; 94:1156-1169. [PMID: 21636483 DOI: 10.3732/ajb.94.7.1156] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
The invasive annual Bromus tectorum (cheatgrass) is distributed in Canada primarily south of 52° N latitude in two diffuse ranges separated by the extensive coniferous forest in western Ontario. The grass was likely introduced independently to eastern and western Canada post-1880. We detected regional variation in the grass's genetic diversity using starch gel electrophoresis to analyze genetic diversity at 25 allozyme loci in 60 populations collected across Canada. The Pgm-1a & Pgm-2a multilocus genotype, which occurs in the grass's native range in Eastern Europe, is prevalent in eastern Canada but occurs at low frequency in western Canada. In contrast, the Got-4c multilocus genotype, found in the native range in Central Europe, is widespread in populations from western Canada. Overall genetic diversity of B. tectorum is much higher in eastern Canada than in the eastern U.S., while the genetic diversity in populations in western North America is similar between Canada and the U.S. The distribution of genetic diversity across Canada strongly suggests multiple introduction events. Heterozygous individuals, which are exceedingly rare in B. tectorum, were detected in three Canadian populations. Formation of novel genotypes through occasional outcrossing events could spark adaptive evolution and further range expansion across Canada of this exceedingly damaging grass.
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Affiliation(s)
- Morgan T Valliant
- School of Biological Sciences, Washington State University, Pullman, Washington 99164 USA
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Genton BJ, Shykoff JA, Giraud T. High genetic diversity in French invasive populations of common ragweed, Ambrosia artemisiifolia, as a result of multiple sources of introduction. Mol Ecol 2005; 14:4275-85. [PMID: 16313592 DOI: 10.1111/j.1365-294x.2005.02750.x] [Citation(s) in RCA: 253] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Ambrosia artemisiifolia is an aggressive North American annual weed, found particularly in sunflower and corn fields. Besides its economic impact on crop yield, it represents a major health problem because of its strongly allergenic pollen. Ragweed was imported inadvertently to Europe in the 18th century and has become invasive in several countries, notably in the Rhône Valley of France. It has recently expanded in both the Provence-Alpes-Côte-d'Azur and Bourgogne regions. As first steps towards understanding the causes and mechanisms of ragweed invasion, genetic variability of French and North American populations was analysed using microsatellites. Overall genetic variability was similar in North America and in the Rhône-Alpes region, but within-population levels of genetic variability were surprisingly lower in native than in invasive French populations. French populations also exhibited lower among-population differentiation. A significant pattern of isolation by distance was detected among North American populations but not among French populations. Assignment tests and distribution of rare alleles did not point to a single origin for all French populations, nor for all individuals within populations and private alleles from different North American populations were found in the same French populations. Indeed, within all French populations, individual plants were roughly equally assigned to the different North American populations. Altogether, these results suggest that the French invasive populations include plants from a mixture of sources. Reduced diversity in populations distant from the original area of introduction indicated that ragweed range expansion probably occurred through sequential bottlenecks from the original populations, and not from subsequent new introductions.
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Affiliation(s)
- B J Genton
- Laboratoire Ecologie, Systématique et Evolution, UMR CNRS-UPS-ENGREF 8079, Université Paris-Sud, Bâtiment 360, 91 405 Orsay cedex, France
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Bossdorf O, Auge H, Lafuma L, Rogers WE, Siemann E, Prati D. Phenotypic and genetic differentiation between native and introduced plant populations. Oecologia 2005; 144:1-11. [PMID: 15891837 DOI: 10.1007/s00442-005-0070-z] [Citation(s) in RCA: 542] [Impact Index Per Article: 28.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2004] [Accepted: 02/22/2005] [Indexed: 11/25/2022]
Abstract
Plant invasions often involve rapid evolutionary change. Founder effects, hybridization, and adaptation to novel environments cause genetic differentiation between native and introduced populations and may contribute to the success of invaders. An influential idea in this context has been the Evolution of Increased Competitive Ability (EICA) hypothesis. It proposes that after enemy release plants rapidly evolve to be less defended but more competitive, thereby increasing plant vigour in introduced populations. To detect evolutionary change in invaders, comparative studies of native versus introduced populations are needed. Here, we review the current empirical evidence from: (1) comparisons of phenotypic variation in natural populations; (2) comparisons of molecular variation with neutral genetic markers; (3) comparisons of quantitative genetic variation in a common environment; and (4) comparisons of phenotypic plasticity across different environments. Field data suggest that increased vigour and reduced herbivory are common in introduced plant populations. In molecular studies, the genetic diversity of introduced populations was not consistently different from that of native populations. Multiple introductions of invasive plants appear to be the rule rather than the exception. In tests of the EICA hypothesis in a common environment, several found increased growth or decreased resistance in introduced populations. However, few provided a full test of the EICA hypothesis by addressing growth and defence in the same species. Overall, there is reasonable empirical evidence to suggest that genetic differentiation through rapid evolutionary change is important in plant invasions. We discuss conceptual and methodological issues associated with cross-continental comparisons and make recommendations for future research. When testing for EICA, greater emphasis should be put on competitive ability and plant tolerance. Moreover, it is important to address evolutionary change in characteristics other than defence and growth that could play a role in plant invasions.
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Affiliation(s)
- Oliver Bossdorf
- Department of Community Ecology, UFZ-Centre for Environmental Research Leipzig-Halle, Theodor-Lieser-Str. 4, 06120, Halle, Germany.
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Dewalt SJ, Hamrick JL. Genetic variation of introduced Hawaiian and native Costa Rican populations of an invasive tropical shrub, Clidemia hirta (Melastomataceae). AMERICAN JOURNAL OF BOTANY 2004; 91:1155-1162. [PMID: 21653471 DOI: 10.3732/ajb.91.8.1155] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
Clidemia hirta is one of the most common woody invasive plants in mesic to wet forests in Hawaii, where it was introduced around 1940. The species is relatively uncommon by comparison in its native range of Central and South America and some Caribbean Islands. We examined genetic variation in allozymes of 20 C. hirta populations on four Hawaiian Islands to determine the introduction history. For comparison, we measured genetic variation in 20 native populations across Costa Rica. Mean levels of genetic variation in Hawaiian and Costa Rican populations were low compared to other woody or introduced plants (11.5-12.5% polymorphic loci, 2.05-2.50 alleles per polymorphic locus, and 0.045-0.063 expected heterozygosity). Most genetic diversity was held within rather than among populations in both areas (G(ST) = 0.120 and 0.271 in Hawaii and Costa Rica, respectively). Hawaiian populations had a high degree of genetic similarity, and no genetic differentiation was found among the four Hawaiian Islands sampled. These patterns of genetic variation in Hawaii suggest that no intraspecific hybridization of genotypes from different parts of the native range has occurred and that introductions to the different islands came from the same or similar source populations. The low levels of genetic diversity in parts of both the native and introduced ranges suggest that genetic variation is unrelated to invasiveness in C. hirta.
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Affiliation(s)
- Saara J Dewalt
- Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana 70803 USA
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Barrett SCH. Mating strategies in flowering plants: the outcrossing-selfing paradigm and beyond. Philos Trans R Soc Lond B Biol Sci 2003; 358:991-1004. [PMID: 12831464 PMCID: PMC1693196 DOI: 10.1098/rstb.2003.1301] [Citation(s) in RCA: 328] [Impact Index Per Article: 15.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Comparisons of the causes and consequences of cross- and self-fertilization have dominated research on plant mating since Darwin's seminal work on plant reproduction. Here, I provide examples of these accomplishments, but also illustrate new approaches that emphasize the role of floral design and display in pollen dispersal and fitness gain through male function. Wide variation in outcrossing rate characterizes animal-pollinated plants. In species with large floral displays, part of the selfing component of mixed mating can arise from geitonogamy and be maladaptive because of strong inbreeding depression and pollen discounting. Floral strategies that separate the benefits of floral display from the mating costs associated with geitonogamy can resolve these conflicts by reducing lost mating opportunities through male function. The results from experiments with marker genes and floral manipulations provide evidence for the function of herkogamy and dichogamy in reducing self-pollination and promoting pollen dispersal. Evidence is also presented indicating that increased selfing resulting from changes to floral design, or geitonogamy in large clones, can act as a stimulus for the evolution of dioecy. The scope of future research on mating strategies needs to be broadened to include investigations of functional links among flowers, inflorescences and plant architecture within the framework of life-history evolution.
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Affiliation(s)
- Spencer C H Barrett
- Department of Botany, University of Toronto, 25 Willcocks Street, Toronto, Ontario M5S 3B2, Canada.
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Mavárez J, Pointier JP, David P, Delay B, Jarne P. Genetic differentiation, dispersal and mating system in the schistosome-transmitting freshwater snail Biomphalaria glabrata. Heredity (Edinb) 2002; 89:258-65. [PMID: 12242641 DOI: 10.1038/sj.hdy.6800127] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2002] [Accepted: 06/23/2002] [Indexed: 11/09/2022] Open
Abstract
Biomphalaria glabrata is the main intermediate host of Schistosoma mansoni in America and one of the most intensely studied species of freshwater snail, yet very little is known about its population biology. Here, we used seven highly polymorphic microsatellite loci to analyse genetic diversity in populations from three regions (Lesser Antilles, Venezuela and southern Brazil). Considerable genetic variation was detected, with an average (s.d.) H(0) = 0.32 (0.24). More diversity per population was found in the Valencia lake basin in Central Venezuela, which suggests an influence of dispersal (via inter-population connectivity) on the restoring of genetic diversity after the demographic bottlenecks recurrently experienced by populations. A marked population structure was detected and there seems to be a relationship between mean differentiation and genetic diversity within regions. There is also a significant isolation-by-distance pattern. The Lesser Antilles populations appear clearly differentiated from the rest, which suggests a single colonisation event followed by local radiation within these islands or multiple colonisation events from the same source area. Our results indicate that B. glabrata essentially cross-fertilises, with little variation in selfing rates among populations. However, significant deficits in heterozygotes and linkage disequilibria were detected in two Venezuelan populations suggesting a mixture of at least two different genetic entities, probably with differences in their respective mating systems.
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Affiliation(s)
- J Mavárez
- Centre d'Ecologie Fonctionnelle et Evolutive, Centre National de la Recherche Scientifique, 1919 route de Mende, 34293 Montpellier cedex, France.
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Amsellem L, Noyer JL, Hossaert-McKey M. Evidence for a switch in the reproductive biology of Rubus alceifolius (Rosaceae) towards apomixis, between its native range and its area of introduction. AMERICAN JOURNAL OF BOTANY 2001; 88:2243-2251. [PMID: 21669657 DOI: 10.2307/3558386] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
We compared the reproductive system of Rubus alceifolius in its native range in Southeast Asia, in Madagascar, where the plant was introduced apparently some centuries ago, and in La Réunion, an Indian Ocean island onto which R. alceifolius was introduced (from Madagascan source populations) around 1850. While tetraploidy makes it impossible to analyze variation in R. alceifolius using classical methods of population genetics, both the patterns of genetic diversity (as revealed by AFLP [amplified fragment length polymorphism] markers) and differences between half-sib progeny and their maternal parents (revealed by microsatellite markers) show that in the plant's native range in southeast Asia, seeds are produced sexually. In contrast, in Madagascar sexual reproduction cannot alone account for the genetic patterns observed with microsatellite markers. Over 85% of the half-sib progeny resulting from open pollination gave multilocus genotypes identical to those of their respective maternal parents, despite the fact that the latter had alleles that were rare in the population. The other progeny differed in having an allele with one motif more or less than that of the maternal parent. Seeds thus appear to be produced mostly or exclusively by apomixis in Madagascar. We present findings suggesting that Madagascan populations result from hybridization of introduced R. alceifolius and native populations of R. roridus, a closely related species of Rubus subgenus Malachobatus, and suggest that apomixis was a consequence of this hybridization. In Reunionese populations of R. alceifolius (derived from Madagascan populations), seeds obtained in controlled pollination experiments were all genetically identical to maternal parents. While genetic variation (microsatellite markers) in Reunionese populations was low, it was sufficient to allow us to demonstrate that seeds could not have resulted from fertilization by the pollen donors chosen for controlled pollinations, or from autogamy, and were produced exclusively by apomixis.
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Affiliation(s)
- L Amsellem
- CIRAD, Centre de Coopération Internationale de Recherche Agronomique pour le Développement, Avenue Agropolis, TA 74/0, 34 398 Montpellier Cedex 5, France; and
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Abstract
This paper presents a perspective of how inferred relatedness, based on genetic marker data such as microsatellites or amplified fragment length polymorphisms (AFLPs), can be used to demonstrate quantitative genetic variation in natural populations. Variation at two levels is considered: among pairs of individuals within populations, and among pairs of subpopulations within a population. In the former, inferred pairwise relatedness, combined with trait measures, allow estimates of heritability 'in the wild'. In the latter, estimates of QST are obtained, in the absence of known heritabilities, via estimates of pairwise FST. Estimators of relatedness based on the 'Kronecker operator' are given. Both methods require actual variation of relationship, a rarely studied aspect of population structure, and not necessarily present. Some conditions for appropriate population structures in the wild are identified, in part through a review of recent studies.
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Affiliation(s)
- K Ritland
- Department of Forest Sciences and, The Center for Applied Conservation Biology, Faculty of Forestry, University of British Columbia, Vancouver, British Columbia V6T 1Z4 Canada.
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Amsellem L, Noyer JL, Le Bourgeois T, Hossaert-McKey M. Comparison of genetic diversity of the invasive weed Rubus alceifolius poir. (Rosaceae) in its native range and in areas of introduction, using amplified fragment length polymorphism (AFLP) markers. Mol Ecol 2000; 9:443-55. [PMID: 10736047 DOI: 10.1046/j.1365-294x.2000.00876.x] [Citation(s) in RCA: 113] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
Theory predicts that colonization of new areas will be associated with population bottlenecks that reduce within-population genetic diversity and increase genetic differentiation among populations. This should be especially true for weedy plant species, which are often characterized by self-compatible breeding systems and vegetative propagation. To test this prediction, and to evaluate alternative scenarios for the history of introduction, the genetic diversity of Rubus alceifolius was studied with amplified fragment length polymorphism (AFLP) markers in its native range in southeast Asia and in several areas where this plant has been introduced and is now a serious weed (Indian Ocean islands, Australia). In its native range, R. alceifolius showed great genetic variability within populations and among geographically close populations (populations sampled ranging from northern Vietnam to Java). In Madagascar, genetic variability was somewhat lower than in its native range, but still considerable. Each population sampled in the other Indian Ocean islands (Mayotte, La Réunion, Mauritius) was characterized by a single different genotype of R. alceifolius for the markers studied, and closely related to individuals from Madagascar. Queensland populations also included only a single genotype, identical to that found in Mauritius. These results suggest that R. alceifolius was first introduced into Madagascar, perhaps on multiple occasions, and that Madagascan individuals were the immediate source of plants that colonized other areas of introduction. Successive nested founder events appear to have resulted in cumulative reduction in genetic diversity. Possible explanations for the monoclonality of R. alceifolius in many areas of introduction are discussed.
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Affiliation(s)
- L Amsellem
- Centre de Coopération Internationale de Recherche Agronomique pour le Développement, Avenue du Val de Montferrand, BP 5035, 34032 Montpellier Cedex 1, France
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Shapcott A. Comparison of the population genetics and densities of five pinanga palm species at kuala belalong, brunei. Mol Ecol 1999; 8:1641-54. [PMID: 10583828 DOI: 10.1046/j.1365-294x.1999.00749.x] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
This study investigated the effect of population density on the population genetic structure of five co-occurring congeneric understorey palm species: Pinanga aristata, P. sp. aff. brevipes, P. dumetosa, P. tenella var. tenella and P. veitchii, all endemic to northern Borneo. The average population densities of the study species varied across a wide spectrum, ranging from 343 (plants per ha) in P. tenella to 10 (plants per ha) in P. veitchii. All species of Pinanga palms studied had quite high levels of genetic diversity (HE: 0.379, 0.256, 0.294, 0.133, 0.352). Genetic diversity (HE) was correlated with population density (D; rs = - 0.433, P < 0.01) and the average distance to the nearest conspecific neighbour (NN; rs = 0.576, P < 0.001) such that the most-dense species had less genetic diversity and the less-dense species had greater genetic diversity. Gene flow (Nm) among populations approximately followed a gradient of increasing species density and abundance, such that the most common species P. dumestosa had the greatest gene flow (Nm = 2.268) between its populations and the rarest, most sparsely distributed species P. sp. aff. brevipes had the lowest (Nm = 0.698). All species of Pinanga were effectively inbred (F: 0.760, 0.856, 0.640, 0.753, 0.674). The amount of homozygosity and inbreeding (HO, F) were not correlated (P > 0.05) with population density (D) or the distance between nearest neighbouring plants of the same species (NN).
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Abstract
Island and mainland populations of plants often differ in their reproductive biology and genetics. The differences become more pronounced the further islands are from mainland sources. Altered pollination conditions have influenced the floral biology and mating systems of island plants in distinct ways. Insufficient pollination has favoured selection of floral traits promoting selfing. In contrast, inferior pollinator service resulting in selfing and inbreeding depression appears to be a factor involved in the evolution of sexual dimorphisms. Stochastic forces play a major role in governing patterns of genetic variation. Island populations are usually more differentiated and contain less diversity than comparable mainland samples. Many general issues in evolutionary biology can be addressed by studies of reproduction and genetics in island plants.
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Estimates of gene flow in Eichhornia paniculata (Pontederiaceae): effects of range substructure. Heredity (Edinb) 1995. [DOI: 10.1038/hdy.1995.174] [Citation(s) in RCA: 23] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022] Open
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Husband BC, Barrett SCH. Pollinator visitation in populations of tristylous Eichhornia paniculata in northeastern Brazil. Oecologia 1992; 89:365-371. [DOI: 10.1007/bf00317414] [Citation(s) in RCA: 27] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/1990] [Accepted: 09/20/1991] [Indexed: 10/24/2022]
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Heterostylous Genetic Polymorphisms: Model Systems for Evolutionary Analysis. EVOLUTION AND FUNCTION OF HETEROSTYLY 1992. [DOI: 10.1007/978-3-642-86656-2_1] [Citation(s) in RCA: 93] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/03/2022]
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