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De Saeger J, Park J, Chung HS, Hernalsteens JP, Van Lijsebettens M, Inzé D, Van Montagu M, Depuydt S. Agrobacterium strains and strain improvement: Present and outlook. Biotechnol Adv 2020; 53:107677. [PMID: 33290822 DOI: 10.1016/j.biotechadv.2020.107677] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2020] [Revised: 11/03/2020] [Accepted: 11/28/2020] [Indexed: 12/12/2022]
Abstract
Almost 40 years ago the first transgenic plant was generated through Agrobacterium tumefaciens-mediated transformation, which, until now, remains the method of choice for gene delivery into plants. Ever since, optimized Agrobacterium strains have been developed with additional (genetic) modifications that were mostly aimed at enhancing the transformation efficiency, although an optimized strain also exists that reduces unwanted plasmid recombination. As a result, a collection of very useful strains has been created to transform a wide variety of plant species, but has also led to a confusing Agrobacterium strain nomenclature. The latter is often misleading for choosing the best-suited strain for one's transformation purposes. To overcome this issue, we provide a complete overview of the strain classification. We also indicate different strain modifications and their purposes, as well as the obtained results with regard to the transformation process sensu largo. Furthermore, we propose additional improvements of the Agrobacterium-mediated transformation process and consider several worthwhile modifications, for instance, by circumventing a defense response in planta. In this regard, we will discuss pattern-triggered immunity, pathogen-associated molecular pattern detection, hormone homeostasis and signaling, and reactive oxygen species in relationship to Agrobacterium transformation. We will also explore alterations that increase agrobacterial transformation efficiency, reduce plasmid recombination, and improve biocontainment. Finally, we recommend the use of a modular system to best utilize the available knowledge for successful plant transformation.
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Affiliation(s)
- Jonas De Saeger
- Laboratory of Plant Growth Analysis, Ghent University Global Campus, Incheon 406-840, South Korea; Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium; Center for Plant Systems Biology, VIB, 9052 Ghent, Belgium
| | - Jihae Park
- Laboratory of Plant Growth Analysis, Ghent University Global Campus, Incheon 406-840, South Korea; Department of Marine Sciences, Incheon National University, Incheon 406-840, South Korea
| | - Hoo Sun Chung
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium; Center for Plant Systems Biology, VIB, 9052 Ghent, Belgium
| | | | - Mieke Van Lijsebettens
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium; Center for Plant Systems Biology, VIB, 9052 Ghent, Belgium
| | - Dirk Inzé
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium; Center for Plant Systems Biology, VIB, 9052 Ghent, Belgium
| | - Marc Van Montagu
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium; Center for Plant Systems Biology, VIB, 9052 Ghent, Belgium
| | - Stephen Depuydt
- Laboratory of Plant Growth Analysis, Ghent University Global Campus, Incheon 406-840, South Korea; Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium; Center for Plant Systems Biology, VIB, 9052 Ghent, Belgium.
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Lacroix B, Citovsky V. A Functional Bacterium-to-Plant DNA Transfer Machinery of Rhizobium etli. PLoS Pathog 2016; 12:e1005502. [PMID: 26968003 PMCID: PMC4788154 DOI: 10.1371/journal.ppat.1005502] [Citation(s) in RCA: 41] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2014] [Accepted: 02/22/2016] [Indexed: 11/19/2022] Open
Abstract
Different strains and species of the soil phytopathogen Agrobacterium possess the ability to transfer and integrate a segment of DNA (T-DNA) into the genome of their eukaryotic hosts, which is mainly mediated by a set of virulence (vir) genes located on the bacterial Ti-plasmid that also contains the T-DNA. To date, Agrobacterium is considered to be unique in its capacity to mediate genetic transformation of eukaryotes. However, close homologs of the vir genes are encoded by the p42a plasmid of Rhizobium etli; this microorganism is related to Agrobacterium, but known only as a symbiotic bacterium that forms nitrogen-fixing nodules in several species of beans. Here, we show that R. etli can mediate functional DNA transfer and stable genetic transformation of plant cells, when provided with a plasmid containing a T-DNA segment. Thus, R. etli represents another bacterial species, besides Agrobacterium, that encodes a protein machinery for DNA transfer to eukaryotic cells and their subsequent genetic modification.
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Affiliation(s)
- Benoît Lacroix
- Department of Biochemistry and Cell Biology, Stony Brook University, Stony Brook, New York, United States of America
| | - Vitaly Citovsky
- Department of Biochemistry and Cell Biology, Stony Brook University, Stony Brook, New York, United States of America
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de Oliveira RS, Oliveira-Neto OB, Moura HFN, de Macedo LLP, Arraes FBM, Lucena WA, Lourenço-Tessutti IT, de Deus Barbosa AA, da Silva MCM, Grossi-de-Sa MF. Transgenic Cotton Plants Expressing Cry1Ia12 Toxin Confer Resistance to Fall Armyworm (Spodoptera frugiperda) and Cotton Boll Weevil (Anthonomus grandis). FRONTIERS IN PLANT SCIENCE 2016; 7:165. [PMID: 26925081 PMCID: PMC4759279 DOI: 10.3389/fpls.2016.00165] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/17/2015] [Accepted: 01/31/2016] [Indexed: 05/21/2023]
Abstract
Gossypium hirsutum (commercial cooton) is one of the most economically important fibers sources and a commodity crop highly affected by insect pests and pathogens. Several transgenic approaches have been developed to improve cotton resistance to insect pests, through the transgenic expression of different factors, including Cry toxins, proteinase inhibitors, and toxic peptides, among others. In the present study, we developed transgenic cotton plants by fertilized floral buds injection (through the pollen-tube pathway technique) using an DNA expression cassette harboring the cry1Ia12 gene, driven by CaMV35S promoter. The T0 transgenic cotton plants were initially selected with kanamycin and posteriorly characterized by PCR and Southern blot experiments to confirm the genetic transformation. Western blot and ELISA assays indicated the transgenic cotton plants with higher Cry1Ia12 protein expression levels to be further tested in the control of two major G. hirsutum insect pests. Bioassays with T1 plants revealed the Cry1Ia12 protein toxicity on Spodoptera frugiperda larvae, as evidenced by mortality up to 40% and a significant delay in the development of the target insects compared to untransformed controls (up to 30-fold). Also, an important reduction of Anthonomus grandis emerging adults (up to 60%) was observed when the insect larvae were fed on T1 floral buds. All the larvae and adult insect survivors on the transgenic lines were weaker and significantly smaller compared to the non-transformed plants. Therefore, this study provides GM cotton plant with simultaneous resistance against the Lepidopteran (S. frugiperda), and the Coleopteran (A. grandis) insect orders, and all data suggested that the Cry1Ia12 toxin could effectively enhance the cotton transgenic plants resistance to both insect pests.
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Affiliation(s)
- Raquel S. de Oliveira
- Catholic University of BrasiliaBrasilia, Brazil
- Pest-Plant Molecular Interaction Laboratory, Embrapa Genetic Resources and Biotechnology, Brazilian Research Agricultural CorporationBrasilia, Brazil
| | - Osmundo B. Oliveira-Neto
- Pest-Plant Molecular Interaction Laboratory, Embrapa Genetic Resources and Biotechnology, Brazilian Research Agricultural CorporationBrasilia, Brazil
- UNIEURO – University CenterBrasília, Brazil
| | - Hudson F. N. Moura
- Pest-Plant Molecular Interaction Laboratory, Embrapa Genetic Resources and Biotechnology, Brazilian Research Agricultural CorporationBrasilia, Brazil
- Biology Institute, Brasilia UniversityBrasilia, Brazil
| | - Leonardo L. P. de Macedo
- Pest-Plant Molecular Interaction Laboratory, Embrapa Genetic Resources and Biotechnology, Brazilian Research Agricultural CorporationBrasilia, Brazil
| | - Fabrício B. M. Arraes
- Pest-Plant Molecular Interaction Laboratory, Embrapa Genetic Resources and Biotechnology, Brazilian Research Agricultural CorporationBrasilia, Brazil
- Federal University of Rio Grande do SulPorto Alegre, Brazil
| | - Wagner A. Lucena
- Pest-Plant Molecular Interaction Laboratory, Embrapa Genetic Resources and Biotechnology, Brazilian Research Agricultural CorporationBrasilia, Brazil
- Embrapa CottonCampina Grande, Brazil
| | - Isabela T. Lourenço-Tessutti
- Pest-Plant Molecular Interaction Laboratory, Embrapa Genetic Resources and Biotechnology, Brazilian Research Agricultural CorporationBrasilia, Brazil
| | - Aulus A. de Deus Barbosa
- Pest-Plant Molecular Interaction Laboratory, Embrapa Genetic Resources and Biotechnology, Brazilian Research Agricultural CorporationBrasilia, Brazil
| | - Maria C. M. da Silva
- Pest-Plant Molecular Interaction Laboratory, Embrapa Genetic Resources and Biotechnology, Brazilian Research Agricultural CorporationBrasilia, Brazil
| | - Maria F. Grossi-de-Sa
- Catholic University of BrasiliaBrasilia, Brazil
- Pest-Plant Molecular Interaction Laboratory, Embrapa Genetic Resources and Biotechnology, Brazilian Research Agricultural CorporationBrasilia, Brazil
- *Correspondence: Maria F. Grossi-de-Sa,
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Numata K. Poly(amino acid)s/polypeptides as potential functional and structural materials. Polym J 2015. [DOI: 10.1038/pj.2015.35] [Citation(s) in RCA: 74] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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Lakshmanan M, Kodama Y, Yoshizumi T, Sudesh K, Numata K. Rapid and efficient gene delivery into plant cells using designed peptide carriers. Biomacromolecules 2013; 14:10-6. [PMID: 23215041 DOI: 10.1021/bm301275g] [Citation(s) in RCA: 66] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Abstract
To develop a new easy and quick gene delivery system for any types of plants, we prepared ionic complexes of plasmid DNA with designed peptide carriers, each of which combined a cell-penetrating peptide (Bp100 or Tat(2)) with a polycation (nona-arginine or a copolymer of histidine and lysine). The present system via the designed peptides demonstrated rapid and efficient transient transfections into intact leaf cells of Nicotiana benthamiana and Arabidopsis thaliana without protoplast preparations. The designed peptides demonstrated significantly higher transfection efficiency in comparison to the nonfusion peptides (Bp100, Tat2, nona-arginine, and copolymer of histidine and lysine), indicating that the combination of functional peptides was a key to develop an efficient peptide-based gene delivery system. On the basis of the results, we exhibited the versatility of the designed peptide-based gene delivery system, which will explore the application of plant biotechnology.
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Affiliation(s)
- Manoj Lakshmanan
- Enzyme Research Team, RIKEN Biomass Engineering Program, RIKEN, 2-1 Hirosawa, Wako-shi, Saitama 351-0198, Japan
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Wendt T, Doohan F, Winckelmann D, Mullins E. Gene transfer into Solanum tuberosum via Rhizobium spp. Transgenic Res 2010; 20:377-86. [PMID: 20582626 DOI: 10.1007/s11248-010-9423-4] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2009] [Accepted: 06/15/2010] [Indexed: 10/19/2022]
Abstract
Agrobacterium tumefaciens-mediated transformation (ATMT) is the preferred technique for gene transfer into crops. A major disadvantage of the technology remains the complexity of the patent landscape that surrounds ATMT which restricts its use for commercial applications. An alternative system has been described (Broothaerts et al. in Nature 433:629-633, 2005) detailing the propensity of three rhizobia to transform the model crop Arabidopsis thaliana, the non-food crop Nicotiana tabacum and, at a very low frequency, the monocotyledonous crop Oryza sativa. In this report we describe for the first time the genetic transformation of Solanum tuberosum using the non-Agrobacterium species Sinorhizobium meliloti, Rhizobium sp. NGR234 and Mesorhizobium loti. This was achieved by combining an optimal bacterium and host co-cultivation period with a low antibiotic regime during the callus and shoot induction stages. Using this optimized protocol the transformation frequency (calculated as % of shoots equipped with root systems with the ability to grow in rooting media supplemented with 25 μg/ml hygromycin) of the rhizobia strains was calculated at 4.72, 5.85 and 1.86% for S. meliloti, R. sp. NGR234 and M. loti respectively, compared to 47.6% for the A. tumefaciens control. Stable transgene integration and expression was confirmed via southern hybridisation, quantitative PCR analysis and histochemical screening of both leaf and/or tuber tissue. In light of the rapid advances in potato genomics, combined with the sequencing of the potato genome, the ability of alternative bacteria species to genetically transform this major food crop will provide a novel resource to the Solanaceae community as it continues to develop potato as both a food and non-food crop.
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Affiliation(s)
- Toni Wendt
- Teagasc Crops Research Centre, Plant Biotechnology Unit, Oak Park, Carlow, Ireland
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Rommens CM. Barriers and paths to market for genetically engineered crops. PLANT BIOTECHNOLOGY JOURNAL 2010; 8:101-111. [PMID: 19968823 DOI: 10.1111/j.1467-7652.2009.00464.x] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
Each year, billions of dollars are invested in efforts to improve crops through genetic engineering (GE). These activities have resulted in a surge of publications and patents on technologies and genes: a momentum in basic research that, unfortunately, is not sustained throughout the subsequent phases of product development. After more than two decades of intensive research, the market for transgenic crops is still dominated by applications of just a handful of methods and genes. This discrepancy between research and development reflects difficulties in understanding and overcoming seven main barriers-to-entry: (1) trait efficacy in the field, (2) critical product concepts, (3) freedom-to-operate, (4) industry support, (5) identity preservation and stewardship, (6) regulatory approval and (7) retail and consumer acceptance. In this review, I describe the various roadblocks to market for transgenic crops and also discuss methods and approaches on how to overcome these, especially in the United States.
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Diogo LC, Fernandes RS, Marcussi S, Menaldo DL, Roberto PG, Matrangulo PVF, Pereira PS, França SC, Giuliatti S, Soares AM, Lourenço MV. Inhibition of Snake Venoms and Phospholipases A2by Extracts from Native and Genetically ModifiedEclipta alba: Isolation of Active Coumestans. Basic Clin Pharmacol Toxicol 2009; 104:293-9. [DOI: 10.1111/j.1742-7843.2008.00350.x] [Citation(s) in RCA: 56] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Chen CP, Chou JC, Liu BR, Chang M, Lee HJ. Transfection and expression of plasmid DNA in plant cells by an arginine-rich intracellular delivery peptide without protoplast preparation. FEBS Lett 2007; 581:1891-7. [PMID: 17433309 DOI: 10.1016/j.febslet.2007.03.076] [Citation(s) in RCA: 52] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2007] [Revised: 03/01/2007] [Accepted: 03/21/2007] [Indexed: 01/18/2023]
Abstract
The delivery and expression of exogenous genes in plant cells have been of particular interest for plant research and biotechnology. Here, we present results demonstrating a simple DNA transfection system in plants. Short arginine-rich intracellular delivery peptide, a protein transduction domain, was capable of delivering plasmid DNA into living plant cells non-covalently. This peptide-mediated DNA delivery conferred several advantages, such as nuclear targeting, non-toxic effect, and ease of preparation without protoplast formulation. Thus, this novel technology shall provide a powerful tool to investigate gene function in vivo, and lay the foundation for the production of transgenic plants in future.
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Affiliation(s)
- Chung-Pin Chen
- Department of Life Science, National Dong Hwa University, Hualien 97401, Taiwan
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