1
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Artigas P, Meyer DJ, Young VC, Spontarelli K, Eastman J, Strandquist E, Rui H, Roux B, Birk MA, Nakanishi H, Abe K, Gatto C. A Na pump with reduced stoichiometry is up-regulated by brine shrimp in extreme salinities. Proc Natl Acad Sci U S A 2023; 120:e2313999120. [PMID: 38079564 PMCID: PMC10756188 DOI: 10.1073/pnas.2313999120] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2023] [Accepted: 10/27/2023] [Indexed: 12/18/2023] Open
Abstract
Brine shrimp (Artemia) are the only animals to thrive at sodium concentrations above 4 M. Salt excretion is powered by the Na+,K+-ATPase (NKA), a heterodimeric (αβ) pump that usually exports 3Na+ in exchange for 2 K+ per hydrolyzed ATP. Artemia express several NKA catalytic α-subunit subtypes. High-salinity adaptation increases abundance of α2KK, an isoform that contains two lysines (Lys308 and Lys758 in transmembrane segments TM4 and TM5, respectively) at positions where canonical NKAs have asparagines (Xenopus α1's Asn333 and Asn785). Using de novo transcriptome assembly and qPCR, we found that Artemia express two salinity-independent canonical α subunits (α1NN and α3NN), as well as two β variants, in addition to the salinity-controlled α2KK. These β subunits permitted heterologous expression of the α2KK pump and determination of its CryoEM structure in a closed, ion-free conformation, showing Lys758 residing within the ion-binding cavity. We used electrophysiology to characterize the function of α2KK pumps and compared it to that of Xenopus α1 (and its α2KK-mimicking single- and double-lysine substitutions). The double substitution N333K/N785K confers α2KK-like characteristics to Xenopus α1, and mutant cycle analysis reveals energetic coupling between these two residues, illustrating how α2KK's Lys308 helps to maintain high affinity for external K+ when Lys758 occupies an ion-binding site. By measuring uptake under voltage clamp of the K+-congener 86Rb+, we prove that double-lysine-substituted pumps transport 2Na+ and 1 K+ per catalytic cycle. Our results show how the two lysines contribute to generate a pump with reduced stoichiometry allowing Artemia to maintain steeper Na+ gradients in hypersaline environments.
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Affiliation(s)
- Pablo Artigas
- Department of Cell Physiology and Molecular Biophysics, Center for Membrane Protein Research, Texas Tech University Health Sciences Center, Lubbock, TX79430
| | - Dylan J. Meyer
- Department of Cell Physiology and Molecular Biophysics, Center for Membrane Protein Research, Texas Tech University Health Sciences Center, Lubbock, TX79430
| | - Victoria C. Young
- Department of Cell Physiology and Molecular Biophysics, Center for Membrane Protein Research, Texas Tech University Health Sciences Center, Lubbock, TX79430
| | - Kerri Spontarelli
- Department of Cell Physiology and Molecular Biophysics, Center for Membrane Protein Research, Texas Tech University Health Sciences Center, Lubbock, TX79430
| | - Jessica Eastman
- Department of Cell Physiology and Molecular Biophysics, Center for Membrane Protein Research, Texas Tech University Health Sciences Center, Lubbock, TX79430
| | - Evan Strandquist
- School of Biological Sciences, Illinois State University, Normal, IL61790
| | - Huan Rui
- Department of Biochemistry and Molecular Biology, The University of Chicago, Chicago, IL60637
| | - Benoît Roux
- Department of Biochemistry and Molecular Biology, The University of Chicago, Chicago, IL60637
| | - Matthew A. Birk
- Department of Biology, Saint Francis University, Loretto, PA15940
| | - Hanayo Nakanishi
- Department of Basic Medical Sciences, Cellular and Structural Physiology Institute, Graduate School of Pharmaceutical Sciences, Nagoya University, Nagoya464-8601, Japan
| | - Kazuhiro Abe
- Department of Basic Medical Sciences, Cellular and Structural Physiology Institute, Graduate School of Pharmaceutical Sciences, Nagoya University, Nagoya464-8601, Japan
| | - Craig Gatto
- School of Biological Sciences, Illinois State University, Normal, IL61790
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2
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Galarza-Muñoz G, Soto-Morales SI, Jiao S, Holmgren M, Rosenthal JJC. Molecular determinants for cold adaptation in an Antarctic Na +/K +-ATPase. Proc Natl Acad Sci U S A 2023; 120:e2301207120. [PMID: 37782798 PMCID: PMC10576127 DOI: 10.1073/pnas.2301207120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2023] [Accepted: 07/28/2023] [Indexed: 10/04/2023] Open
Abstract
Enzymes from ectotherms living in chronically cold environments have evolved structural innovations to overcome the effects of temperature on catalysis. Cold adaptation of soluble enzymes is driven by changes within their primary structure or the aqueous milieu. For membrane-embedded enzymes, like the Na+/K+-ATPase, the situation is different because changes to the lipid bilayer in which they operate may also be relevant. Although much attention has been focused on thermal adaptation within lipid bilayers, relatively little is known about the contribution of structural changes within membrane-bound enzymes themselves. The identification of specific mutations that confer temperature compensation is complicated by the presence of neutral mutations, which can be more numerous. In the present study, we identified specific amino acids in a Na+/K+-ATPase from an Antarctic octopus that underlie cold resistance. Our approach was to generate chimeras between an Antarctic clone and a temperate ortholog and then study their temperature sensitivities in Xenopus oocytes using an electrophysiological approach. We identified 12 positions in the Antarctic Na+/K+-ATPase that, when transferred to the temperate ortholog, were sufficient to confer cold tolerance. Furthermore, although all 12 Antarctic mutations were required for the full phenotype, a single leucine in the third transmembrane segment (M3) imparted most of it. Mutations that confer cold resistance are mostly in transmembrane segments, at positions that face the lipid bilayer. We propose that the interface between a transmembrane enzyme and the lipid bilayer is a critical determinant of temperature sensitivity and, accordingly, has been a prime evolutionary target for thermal adaptation.
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Affiliation(s)
- Gaddiel Galarza-Muñoz
- Institute of Neurobiology, University of Puerto Rico, Medical Sciences Campus, San Juan, PR00901
| | - Sonia I. Soto-Morales
- Institute of Neurobiology, University of Puerto Rico, Medical Sciences Campus, San Juan, PR00901
| | - Song Jiao
- National Institute of Neurological Disorders and Stroke, NIH, Bethesda, MD20892
| | - Miguel Holmgren
- National Institute of Neurological Disorders and Stroke, NIH, Bethesda, MD20892
| | - Joshua J. C. Rosenthal
- Institute of Neurobiology, University of Puerto Rico, Medical Sciences Campus, San Juan, PR00901
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3
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Moreno C, Jiao S, Yano S, Holmgren M. Disease mutations of human α3 Na +/K +-ATPase define extracellular Na + binding/occlusion kinetics at ion binding site III. PNAS NEXUS 2022; 1:pgac205. [PMID: 36304555 PMCID: PMC9585393 DOI: 10.1093/pnasnexus/pgac205] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/03/2022] [Accepted: 09/23/2022] [Indexed: 11/06/2022]
Abstract
Na+/K+-ATPase, which creates transmembrane electrochemical gradients by exchanging 3 Na+ for 2 K+, is central to the pathogenesis of neurological diseases such as alternating hemiplegia of childhood. Although Na+/K+-ATPase has 3 distinct ion binding sites I-III, the difficulty of distinguishing ion binding events at each site from the others hinders kinetic study of these transitions. Here, we show that binding of Na+ at each site in the human α3 Na+/K+-ATPase can be resolved using extracellular Na+-mediated transient currents. When Na+/K+-ATPase is constrained to bind and release only Na+, three kinetic components: fast, medium, and slow, can be isolated, presumably corresponding to the protein dynamics associated with the binding (or release depending on the voltage step direction) and the occlusion (or deocclusion) of each of the 3 Na+. Patient-derived mutations of residues which coordinate Na+ at site III exclusively impact the slow component, demonstrating that site III is crucial for deocclusion and release of the first Na+ into the extracellular milieu. These results advance understanding of Na+/K+-ATPase mutation pathogenesis and provide a foundation for study of individual ions' binding kinetics.
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Affiliation(s)
- Cristina Moreno
- Molecular Neurophysiology Section, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD 20892, USA
| | - Song Jiao
- Molecular Neurophysiology Section, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD 20892, USA
| | - Sho Yano
- Molecular Neurophysiology Section, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD 20892, USA,Medical Genetics and Genomic Medicine Training Program, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA
| | - Miguel Holmgren
- Correspondence should be addressed: Miguel Holmgren, Ph.D. Molecular Neurophysiology Section, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD 20892, USA. Tel: +1-(301) 451-6259; E-mail:
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4
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Moreno C, Yano S, Bezanilla F, Latorre R, Holmgren M. Transient Electrical Currents Mediated by the Na +/K +-ATPase: A Tour from Basic Biophysics to Human Diseases. Biophys J 2020; 119:236-242. [PMID: 32579966 PMCID: PMC7376075 DOI: 10.1016/j.bpj.2020.06.006] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2020] [Revised: 04/06/2020] [Accepted: 06/03/2020] [Indexed: 01/14/2023] Open
Abstract
The Na+/K+-ATPase is a chemical molecular machine responsible for the movement of Na+ and K+ ions across the cell membrane. These ions are moved against their electrochemical gradients, so the protein uses the free energy of ATP hydrolysis to transport them. In fact, the Na+/K+-ATPase is the single largest consumer of energy in most cells. In each pump cycle, the protein sequentially exports 3Na+ out of the cell, then imports 2K+ into the cell at an approximate rate of 200 cycles/s. In each half cycle of the transport process, there is a state in which ions are stably trapped within the permeation pathway of the protein by internal and external gates in their closed states. These gates are required to open alternately; otherwise, passive ion diffusion would be a wasteful end of the cell's energy. Once one of these gates open, ions diffuse from their binding sites to the accessible milieu, which involves moving through part of the electrical field across the membrane. Consequently, ions generate transient electrical currents first discovered more than 30 years ago. They have been studied in a variety of preparations, including native and heterologous expression systems. Here, we review three decades' worth of work using these transient electrical signals to understand the kinetic transitions of the movement of Na+ and K+ ions through the Na+/K+-ATPase and propose the significance that this work might have to the understanding of the dysfunction of human pump orthologs responsible for some newly discovered neurological pathologies.
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Affiliation(s)
- Cristina Moreno
- Molecular Neurophysiology Section, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, Maryland
| | - Sho Yano
- Medical Genetics and Genomic Medicine Training Program, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland
| | - Francisco Bezanilla
- Department of Biochemistry and Molecular Biology, University of Chicago, Gordon Center for Integrative Sciences, Chicago, Illinois
| | - Ramon Latorre
- Centro Interdisciplinario de Neurociencia de Valparaíso, Universidad de Valparaíso, Valparaíso, Chile
| | - Miguel Holmgren
- Molecular Neurophysiology Section, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, Maryland.
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5
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Pedersen JT, Palmgren M. Why do plants lack sodium pumps and would they benefit from having one? FUNCTIONAL PLANT BIOLOGY : FPB 2017; 44:473-479. [PMID: 32480580 DOI: 10.1071/fp16422] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/09/2016] [Accepted: 01/31/2017] [Indexed: 05/26/2023]
Abstract
The purpose of this minireview is to discuss the feasibility of creating a new generation of salt-tolerant plants that express Na+/K+-ATPases from animals or green algae. Attempts to generate salt-tolerant plants have focussed on increase the expression of or introducing salt stress-related genes from plants, bryophytes and yeast. Even though these approaches have resulted in plants with increased salt tolerance, plant growth is decreased under salt stress and often also under normal growth conditions. New strategies to increase salt tolerance are therefore needed. Theoretically, plants transformed with an animal-type Na+/K+-ATPase should not only display a high degree of salt tolerance but should also reduce the stress response exhibited by the first generation of salt-tolerant plants under both normal and salt stress conditions. The biological feasibility of such a strategy of producing transgenic plants that display improved growth on saline soil but are indistinguishable from wild-type plants under normal growth conditions, is discussed.
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Affiliation(s)
- Jesper T Pedersen
- Center for Membrane Pumps in Cells and Disease, Danish National Research Foundation, Department of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, DK-1871 Frederiksberg C, Denmark
| | - Michael Palmgren
- Center for Membrane Pumps in Cells and Disease, Danish National Research Foundation, Department of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, DK-1871 Frederiksberg C, Denmark
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6
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Abstract
The vital gradients of Na+ and K+ across the plasma membrane of animal cells are maintained by the Na,K-ATPase, an αβ enzyme complex, whose α subunit carries out the ion transport and ATP hydrolysis. The specific roles of the β subunit isoforms are less clear, though β2 is essential for motor physiology in mammals. Here, we show that compared to β1 and β3, β2 stabilizes the Na+-occluded E1P state relative to the outward-open E2P state, and that the effect is mediated by its transmembrane domain. Molecular dynamics simulations further demonstrate that the tilt angle of the β transmembrane helix correlates with its functional effect, suggesting that the relative orientation of β modulates ion binding at the α subunit. β2 is primarily expressed in granule neurons and glomeruli in the cerebellum, and we propose that its unique functional characteristics are important to respond appropriately to the cerebellar Na+ and K+ gradients.
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7
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Hu MY, Guh YJ, Shao YT, Kuan PL, Chen GL, Lee JR, Jeng MS, Tseng YC. Strong Ion Regulatory Abilities Enable the Crab Xenograpsus testudinatus to Inhabit Highly Acidified Marine Vent Systems. Front Physiol 2016; 7:14. [PMID: 26869933 PMCID: PMC4734175 DOI: 10.3389/fphys.2016.00014] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2015] [Accepted: 01/11/2016] [Indexed: 12/21/2022] Open
Abstract
Hydrothermal vent organisms have evolved physiological adaptations to cope with extreme abiotic conditions including temperature and pH. To date, acid-base regulatory abilities of vent organisms are poorly investigated, although this physiological feature is essential for survival in low pH environments. We report the acid-base regulatory mechanisms of a hydrothermal vent crab, Xenograpsus testudinatus, endemic to highly acidic shallow-water vent habitats with average environment pH-values ranging between 5.4 and 6.6. Within a few hours, X. testudinatus restores extracellular pH (pHe) in response to environmental acidification of pH 6.5 (1.78 kPa pCO2) accompanied by an increase in blood HCO3- levels from 8.8 ± 0.3 to 31 ± 6 mM. Branchial Na+/K+-ATPase (NKA) and V-type H+-ATPase (VHA), the major ion pumps involved in branchial acid-base regulation, showed dynamic increases in response to acidified conditions on the mRNA, protein and activity level. Immunohistochemical analyses demonstrate the presence of NKA in basolateral membranes, whereas the VHA is predominantly localized in cytoplasmic vesicles of branchial epithelial- and pillar-cells. X. testudinatus is closely related to other strong osmo-regulating brachyurans, which is also reflected in the phylogeny of the NKA. Accordingly, our results suggest that the evolution of strong ion regulatory abilities in brachyuran crabs that allowed the occupation of ecological niches in euryhaline, freshwater, and terrestrial habitats are probably also linked to substantial acid-base regulatory abilities. This physiological trait allowed X. testudinatus to successfully inhabit one of the world's most acidic marine environments.
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Affiliation(s)
- Marian Y Hu
- Institute of Cellular and Organismic Biology, Academia SinicaTaipei, Taiwan; Institute of Physiology, Christian-Albrechts University KielKiel, Germany
| | - Ying-Jey Guh
- Institute of Biological Chemistry, Academia Sinica Taipei, Taiwan
| | - Yi-Ta Shao
- Institute of Marine Biology, National Taiwan Ocean University Keelung, Taiwan
| | - Pou-Long Kuan
- Department of Life Science, National Taiwan Normal University Taipei, Taiwan
| | - Guan-Lin Chen
- Department of Life Science, National Taiwan Normal University Taipei, Taiwan
| | - Jay-Ron Lee
- Institute of Cellular and Organismic Biology, Academia Sinica Taipei, Taiwan
| | - Ming-Shiou Jeng
- Biodiversity Research Center, Academia Sinica Taipei, Taiwan
| | - Yung-Che Tseng
- Department of Life Science, National Taiwan Normal University Taipei, Taiwan
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8
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Thabet R, Rouault JD, Ayadi H, Leignel V. Structural analysis of the α subunit of Na(+)/K(+) ATPase genes in invertebrates. Comp Biochem Physiol B Biochem Mol Biol 2016; 196-197:11-18. [PMID: 26812300 DOI: 10.1016/j.cbpb.2016.01.007] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2015] [Revised: 01/20/2016] [Accepted: 01/21/2016] [Indexed: 01/18/2023]
Abstract
The Na(+)/K(+) ATPase is a ubiquitous pump coordinating the transport of Na(+) and K(+) across the membrane of cells and its role is fundamental to cellular functions. It is heteromer in eukaryotes including two or three subunits (α, β and γ which is specific to the vertebrates). The catalytic functions of the enzyme have been attributed to the α subunit. Several complete α protein sequences are available, but only few gene structures were characterized. We identified the genomic sequences coding the α-subunit of the Na(+)/K(+) ATPase, from the whole-genome shotgun contigs (WGS), NCBI Genomes (chromosome), Genomic Survey Sequences (GSS) and High Throughput Genomic Sequences (HTGS) databases across distinct phyla. One copy of the α subunit gene was found in Annelida, Arthropoda, Cnidaria, Echinodermata, Hemichordata, Mollusca, Placozoa, Porifera, Platyhelminthes, Urochordata, but the nematodes seem to possess 2 to 4 copies. The number of introns varied from 0 (Platyhelminthes) to 26 (Porifera); and their localization and length are also highly variable. Molecular phylogenies (Maximum Likelihood and Maximum Parsimony methods) showed some clusters constituted by (Chordata/(Echinodermata/Hemichordata)) or (Plathelminthes/(Annelida/Mollusca)) and a basal position for Porifera. These structural analyses increase our knowledge about the evolutionary events of the α subunit genes in the invertebrates.
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Affiliation(s)
- Rahma Thabet
- University of Sfax, Laboratory of Biodiversity and Aquatic Ecosystems UR/11ES72, Ecology and Planktonology, Department of Life Sciences, Road Soukra Km 3.5, BP1171, 3000, Sfax, Tunisia
| | - J-D Rouault
- Laboratoire Evolution, Genomes et Speciation, UPR9034, CNRS, 91198 Gif-sur-Yvette, France
| | - Habib Ayadi
- University of Sfax, Laboratory of Biodiversity and Aquatic Ecosystems UR/11ES72, Ecology and Planktonology, Department of Life Sciences, Road Soukra Km 3.5, BP1171, 3000, Sfax, Tunisia
| | - Vincent Leignel
- Université du Maine, Laboratoire Mer Molecule Sante EA 2160 FR-CNRS 3473 IUML, 72085 Le Mans, France.
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9
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Hu MY, Hwang PP, Tseng YC. Recent advances in understanding trans-epithelial acid-base regulation and excretion mechanisms in cephalopods. Tissue Barriers 2015; 3:e1064196. [PMID: 26716070 DOI: 10.1080/21688370.2015.1064196] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2015] [Revised: 06/09/2015] [Accepted: 06/15/2015] [Indexed: 01/17/2023] Open
Abstract
Cephalopods have evolved complex sensory systems and an active lifestyle to compete with fish for similar resources in the marine environment. Their highly active lifestyle and their extensive protein metabolism has led to substantial acid-base regulatory abilities enabling these organisms to cope with CO2 induced acid-base disturbances. In convergence to teleost, cephalopods possess an ontogeny-dependent shift in ion-regulatory epithelia with epidermal ionocytes being the major site of embryonic acid-base regulation and ammonia excretion, while gill epithelia take these functions in adults. Although the basic morphology and excretory function of gill epithelia in cephalopods were outlined almost half a century ago, modern immunohistological and molecular techniques are bringing new insights to the mechanistic basis of acid-base regulation and excretion of nitrogenous waste products (e.g. NH3/NH4 (+)) across ion regulatory epithelia of cephalopods. Using cephalopods as an invertebrate model, recent findings reveal partly conserved mechanisms but also novel aspects of acid-base regulation and nitrogen excretion in these exclusively marine animals. Comparative studies using a range of marine invertebrates will create a novel and exciting research direction addressing the evolution of pH regulatory and excretory systems.
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Affiliation(s)
- Marian Y Hu
- Institute of Physiology; Christian-Albrechts University Kiel ; Kiel, Germany ; Institute of Cellular and Organismic Biology; Academia Sinica ; Taipei City, Taiwan
| | - Pung-Pung Hwang
- Institute of Cellular and Organismic Biology; Academia Sinica ; Taipei City, Taiwan
| | - Yung-Che Tseng
- Department of Life Science; National Taiwan Normal University ; Taipei City, Taiwan
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10
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Clausen MV, Nissen P, Poulsen H. The α4 isoform of the Na⁺,K⁺-ATPase is tuned for changing extracellular environments. FEBS J 2015; 283:282-93. [PMID: 26476261 DOI: 10.1111/febs.13567] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2015] [Revised: 09/20/2015] [Accepted: 10/15/2015] [Indexed: 11/30/2022]
Abstract
In their journey from the male to the female reproductive tract, spermatozoa are confronted with a constantly changing environment. To cope with the associated challenges, spermatozoa express a distinct set of transporters, channels and pumps. One of the membrane proteins unique to spermatozoa is the α4 isoform of the Na(+) ,K(+) -ATPase. In addition to α4, spermatozoa express the ubiquous α1 variant. To get a detailed understanding of how α1 and α4 differ, and why spermatozoa need an additional Na(+) ,K(+) -ATPase, we have conducted an electrophysiological comparison of the rodent isoforms (rat α4 versus mouse α1-3) using the Xenopus oocyte expression system. We demonstrate isoform-specific differences in the voltage sensitivity of steady-state turnover, with α2 being the more sensitive, and α1 and α2 having faster Na(+) release kinetics than α3 and α4. Our data further show that the α1 and α2 turnover rates are fast compared with those of α3 and α4. Finally, α4 is less influenced by changes in extracellular Na(+) and temperature than α1. Based on these findings, we discuss the possibility that evolution has selected robust activity rather than rapid turnover for α4.
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Affiliation(s)
| | - Poul Nissen
- Department of Molecular Biology and Genetics, Aarhus University, Denmark
| | - Hanne Poulsen
- Department of Molecular Biology and Genetics, Aarhus University, Denmark
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11
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Abstract
The Na+/K+-ATPase restores sodium
(Na+) and potassium (K+)
electrochemical gradients dissipated by action potentials and ion-coupled transport
processes. As ions are transported, they become transiently trapped between
intracellular and extracellular gates. Once the external gate opens, three
Na+ ions are released, followed by the binding and
occlusion of two K+ ions. While the mechanisms of
Na+ release have been well characterized by the study of
transient Na+ currents, smaller and faster transient
currents mediated by external K+ have been more difficult to
study. Here we show that external K+ ions travelling to
their binding sites sense only a small fraction of the electric field as they
rapidly and simultaneously become occluded. Consistent with these results, molecular
dynamics simulations of a pump model show a wide water-filled access channel
connecting the binding site to the external solution. These results suggest a
mechanism of K+ gating different from that of
Na+ occlusion. During transport by the
Na+/K+-ATPase,
Na+ and K+ ions become occluded
between intra- and extracellular gates. Here Castillo et al. measure transient
electrical signals arising from K+ occlusion and use molecular
simulations to describe a K+ gating mechanism fundamentally
different to that of Na+.
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12
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A structural rearrangement of the Na+/K+-ATPase traps ouabain within the external ion permeation pathway. J Mol Biol 2015; 427:1335-1344. [PMID: 25637661 DOI: 10.1016/j.jmb.2015.01.011] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2014] [Revised: 12/30/2014] [Accepted: 01/18/2015] [Indexed: 02/04/2023]
Abstract
With the use of the energy of ATP hydrolysis, the Na+/K+-ATPase is able to transport across the cell membrane Na+ and K+ against their electrochemical gradients. The enzyme is strongly inhibited by ouabain and its derivatives, some that are therapeutically used for patients with heart failure (cardiotonic steroids). Using lanthanide resonance energy transfer, we trace here the conformational changes occurring on the external side of functional Na+/K+-ATPases induced by the binding of ouabain. Changes in donor/acceptor pair distances are mainly observed within the α subunit of the enzyme. To derive a structural model matching the experimental lanthanide resonance energy transfer distances measured with bound ouabain, we carried out molecular dynamics simulations with energy restraints applied simultaneously using a novel methodology with multiple non-interacting fragments. The restrained simulation, initiated from the X-ray structure of the E2(2K+) state, became strikingly similar to the X-ray structure of the sodium-bound state. The final model shows that ouabain is trapped within the external ion permeation pathway of the pump.
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13
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Thermal mechanisms of millimeter wave stimulation of excitable cells. Biophys J 2014; 104:2622-8. [PMID: 23790370 DOI: 10.1016/j.bpj.2013.05.014] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2013] [Revised: 04/30/2013] [Accepted: 05/07/2013] [Indexed: 11/22/2022] Open
Abstract
Interactions between millimeter waves (MMWs) and biological systems have received increasing attention due to the growing use of MMW radiation in technologies ranging from experimental medical devices to telecommunications and airport security. Studies have shown that MMW exposure alters cellular function, especially in neurons and muscles. However, the biophysical mechanisms underlying such effects are still poorly understood. Due to the high aqueous absorbance of MMW, thermal mechanisms are likely. However, nonthermal mechanisms based on resonance effects have also been postulated. We studied MMW stimulation in a simplified preparation comprising Xenopus laevis oocytes expressing proteins that underlie membrane excitability. Using electrophysiological recordings simultaneously with 60 GHz stimulation, we observed changes in the kinetics and activity levels of voltage-gated potassium and sodium channels and a sodium-potassium pump that are consistent with a thermal mechanism. Furthermore, we showed that MMW stimulation significantly increased the action potential firing rate in oocytes coexpressing voltage-gated sodium and potassium channels, as predicted by thermal terms in the Hodgkin-Huxley model of neurons. Our results suggest that MMW stimulation produces significant thermally mediated effects on excitable cells via basic thermodynamic mechanisms that must be taken into account in the study and use of MMW radiation in biological systems.
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14
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Bonnaud L, Franko D, Vouillot L, Bouteau F. A study of the electrical polarization of Sepia officinalis yolk envelope, a role for Na(+)/K(+)-ATPases in osmoregulation? Commun Integr Biol 2013; 6:e26035. [PMID: 24505501 PMCID: PMC3913672 DOI: 10.4161/cib.26035] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2013] [Revised: 08/02/2013] [Accepted: 08/03/2013] [Indexed: 01/24/2023] Open
Abstract
The cuttlefish Sepia officinalis mate and spawn in the intertidal zone where eggs are exposed during low tide to osmotic stress. Embryonic outer yolk sac is a putative site for osmoregulation of young S. officinalis embryos. By using electrophysiological recordings and immunostaining we showed, (i) that the chorion is only a passive barrier for ions, since large molecules could not pass through it, (ii) that a complex transepithelial potential difference occurs through the yolk epithelium, (iii) that ionocyte-like cells and Na+/K+-ATPases were localized in the yolk epithelium and (iv) that ouabain sensitive Na+/K+-ATPase activity could participate to this yolk polarization. These data warrant further study on the role of ion transport systems of this epithelium in the osmoregulation processes in S. officinalis embryos.
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Affiliation(s)
- Laure Bonnaud
- Muséum National d'Histoire Naturelle DMPA; UMR BOREA MNHN-CNRS 7208-IRD 207-UPMC; Paris, France ; Univ. Paris Diderot; Sorbonne Paris Cité; Paris, France
| | - Delphine Franko
- Muséum National d'Histoire Naturelle DMPA; UMR BOREA MNHN-CNRS 7208-IRD 207-UPMC; Paris, France ; Univ. Paris Diderot; Sorbonne Paris Cité; Paris, France
| | - Léna Vouillot
- Muséum National d'Histoire Naturelle DMPA; UMR BOREA MNHN-CNRS 7208-IRD 207-UPMC; Paris, France
| | - François Bouteau
- Univ. Paris Diderot; Sorbonne Paris Cité, Institut des Energies de Demain (FRE 3597); Paris, France
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15
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CO2-driven seawater acidification differentially affects development and molecular plasticity along life history of fish (Oryzias latipes). Comp Biochem Physiol A Mol Integr Physiol 2013; 165:119-30. [DOI: 10.1016/j.cbpa.2013.02.005] [Citation(s) in RCA: 61] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2012] [Revised: 02/04/2013] [Accepted: 02/06/2013] [Indexed: 01/09/2023]
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16
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Piironen J, Kiiskinen P, Huuskonen H, Heikura-Ovaskainen M, Vornanen M. Comparison of Smoltification in Atlantic Salmon (Salmo salar) from Anadromous and Landlocked Populations Under Common Garden Conditions. ANN ZOOL FENN 2013. [DOI: 10.5735/086.050.0101] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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17
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Energy landscape of the reactions governing the Na+ deeply occluded state of the Na+/K+-ATPase in the giant axon of the Humboldt squid. Proc Natl Acad Sci U S A 2011; 108:20556-61. [PMID: 22143771 DOI: 10.1073/pnas.1116439108] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
The Na(+)/K(+) pump is a nearly ubiquitous membrane protein in animal cells that uses the free energy of ATP hydrolysis to alternatively export 3Na(+) from the cell and import 2K(+) per cycle. This exchange of ions produces a steady-state outwardly directed current, which is proportional in magnitude to the turnover rate. Under certain ionic conditions, a sudden voltage jump generates temporally distinct transient currents mediated by the Na(+)/K(+) pump that represent the kinetics of extracellular Na(+) binding/release and Na(+) occlusion/deocclusion transitions. For many years, these events have escaped a proper thermodynamic treatment due to the relatively small electrical signal. Here, taking the advantages offered by the large diameter of the axons from the squid Dosidicus gigas, we have been able to separate the kinetic components of the transient currents in an extended temperature range and thus characterize the energetic landscape of the pump cycle and those transitions associated with the extracellular release of the first Na(+) from the deeply occluded state. Occlusion/deocclusion transition involves large changes in enthalpy and entropy as the ion is exposed to the external milieu for release. Binding/unbinding is substantially less costly, yet larger than predicted for the energetic cost of an ion diffusing through a permeation pathway, which suggests that ion binding/unbinding must involve amino acid side-chain rearrangements at the site.
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18
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DeGiorgis JA, Cavaliere KR, Burbach JPH. Identification of molecular motors in the Woods Hole squid, Loligo pealei: an expressed sequence tag approach. Cytoskeleton (Hoboken) 2011; 68:566-77. [PMID: 21913340 DOI: 10.1002/cm.20531] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2011] [Accepted: 08/26/2011] [Indexed: 12/31/2022]
Abstract
The squid giant axon and synapse are unique systems for studying neuronal function. While a few nucleotide and amino acid sequences have been obtained from squid, large scale genetic and proteomic information is lacking. We have been particularly interested in motors present in axons and their roles in transport processes. Here, to obtain genetic data and to identify motors expressed in squid, we initiated an expressed sequence tag project by single-pass sequencing mRNAs isolated from the stellate ganglia of the Woods Hole Squid, Loligo pealei. A total of 22,689 high quality expressed sequence tag (EST) sequences were obtained and subjected to basic local alignment search tool analysis. Seventy six percent of these sequences matched genes in the National Center for Bioinformatics databases. By CAP3 analysis this library contained 2459 contigs and 7568 singletons. Mining for motors successfully identified six kinesins, six myosins, a single dynein heavy chain, as well as components of the dynactin complex, and motor light chains and accessory proteins. This initiative demonstrates that EST projects represent an effective approach to obtain sequences of interest.
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Affiliation(s)
- Joseph A DeGiorgis
- Department of Biology, Providence College, Providence, Rhode Island, USA.
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19
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Galarza-Muñoz G, Soto-Morales SI, Holmgren M, Rosenthal JJC. Physiological adaptation of an Antarctic Na+/K+-ATPase to the cold. ACTA ACUST UNITED AC 2011; 214:2164-74. [PMID: 21653810 DOI: 10.1242/jeb.048744] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Abstract
Because enzymatic activity is strongly suppressed by the cold, polar poikilotherms face significant adaptive challenges. For example, at 0°C the catalytic activity of a typical enzyme from a temperate organism is reduced by more than 90%. Enzymes embedded in the plasma membrane, such as the Na(+)/K(+)-ATPase, may be even more susceptible to the cold because of thermal effects on the lipid bilayer. Accordingly, adaptive changes in response to the cold may include adjustments to the enzyme or the surrounding lipid environment, or synergistic changes to both. To assess the contribution of the enzyme itself, we cloned orthologous Na(+)/K(+)-ATPase α-subunits from an Antarctic (Pareledone sp.; -1.8°C) and a temperate octopus (Octopus bimaculatus; ∼18°C), and compared their turnover rates and temperature sensitivities in a heterologous expression system. The primary sequences of the two pumps were found to be highly similar (97% identity), with most differences being conservative changes involving hydrophobic residues. The physiology of the pumps was studied using an electrophysiological approach in intact Xenopus oocytes. The voltage dependence of the pumps was equivalent. However, at room temperature the maximum turnover rate of the Antarctic pump was found to be 25% higher than that of the temperate pump. In addition, the Antarctic pump exhibited a lower temperature sensitivity, leading to significantly higher relative activity at lower temperatures. Orthologous Na(+)/K(+) pumps were then isolated from two tropical and two Arctic octopus. The temperature sensitivities of these pumps closely matched those of the temperate and Antarctic pumps, respectively. Thus, reduced thermal sensitivity appears to be a common mechanism driving cold adaptation in the Na(+)/K(+)-ATPase.
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Affiliation(s)
- Gaddiel Galarza-Muñoz
- Institute of Neurobiology, University of Puerto Rico-Medical Sciences Campus, San Juan, Puerto Rico
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20
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Sandtner W, Egwolf B, Khalili-Araghi F, Sánchez-Rodríguez JE, Roux B, Bezanilla F, Holmgren M. Ouabain binding site in a functioning Na+/K+ ATPase. J Biol Chem 2011; 286:38177-38183. [PMID: 21911500 DOI: 10.1074/jbc.m111.267682] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
The Na(+)/K(+) ATPase is an almost ubiquitous integral membrane protein within the animal kingdom. It is also the selective target for cardiotonic derivatives, widely prescribed inhibitors for patients with heart failure. Functional studies revealed that ouabain-sensitive residues distributed widely throughout the primary sequence of the protein. Recently, structural work has brought some consensus to the functional observations. Here, we use a spectroscopic approach to estimate distances between a fluorescent ouabain and a lanthanide binding tag (LBT), which was introduced at five different positions in the Na(+)/K(+) ATPase sequence. These five normally functional LBT-Na(+)/K(+) ATPase constructs were expressed in the cell membrane of Xenopus laevis oocytes, operating under physiological internal and external ion conditions. The spectroscopic data suggest two mutually exclusive distances between the LBT and the fluorescent ouabain. From the estimated distances and using homology models of the LBT-Na(+)/K(+) ATPase constructs, approximate ouabain positions could be determined. Our results suggest that ouabain binds at two sites along the ion permeation pathway of the Na(+)/K(+) ATPase. The external site (low apparent affinity) occupies the same region as previous structural findings. The high apparent affinity site is, however, slightly deeper toward the intracellular end of the protein. Interestingly, in both cases the lactone ring faces outward. We propose a sequential ouabain binding mechanism that is consistent with all functional and structural studies.
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Affiliation(s)
- Walter Sandtner
- Department of Pharmacology, Medical University of Vienna, Waehringer Strasse 13A, 1090 Vienna, Austria
| | - Bernhard Egwolf
- Department of Theoretical and Computational Biophysics, Max Planck Institute for Biophysical Chemistry, 37077 Göttingen, Germany
| | - Fatemeh Khalili-Araghi
- Department of Biochemistry and Molecular Biology, The University of Chicago Gordon Center for Integrative Science, Chicago, Illinois 60637
| | - Jorge E Sánchez-Rodríguez
- Department of Biochemistry and Molecular Biology, The University of Chicago Gordon Center for Integrative Science, Chicago, Illinois 60637
| | - Benoit Roux
- Department of Biochemistry and Molecular Biology, The University of Chicago Gordon Center for Integrative Science, Chicago, Illinois 60637.
| | - Francisco Bezanilla
- Department of Biochemistry and Molecular Biology, The University of Chicago Gordon Center for Integrative Science, Chicago, Illinois 60637.
| | - Miguel Holmgren
- Molecular Neurophysiology Section, Porter Neuroscience Research Center, NINDS, National Institutes of Health, Bethesda, Maryland 20892.
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21
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Colina C, Palavicini JP, Srikumar D, Holmgren M, Rosenthal JJC. Regulation of Na+/K+ ATPase transport velocity by RNA editing. PLoS Biol 2010; 8:e1000540. [PMID: 21124885 PMCID: PMC2990702 DOI: 10.1371/journal.pbio.1000540] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2010] [Accepted: 10/01/2010] [Indexed: 12/27/2022] Open
Abstract
Editing of Na+/K+ ATPase mRNAs modulates the Na+/K+ pump's turnover rate by selectively targeting the release of the final sodium to the outside. Because firing properties and metabolic rates vary widely, neurons require different transport rates from their Na+/K+ pumps in order to maintain ion homeostasis. In this study we show that Na+/K+ pump activity is tightly regulated by a novel process, RNA editing. Three codons within the squid Na+/K+ ATPase gene can be recoded at the RNA level, and the efficiency of conversion for each varies dramatically, and independently, between tissues. At one site, a highly conserved isoleucine in the seventh transmembrane span can be converted to a valine, a change that shifts the pump's intrinsic voltage dependence. Mechanistically, the removal of a single methyl group specifically targets the process of Na+ release to the extracellular solution, causing a higher turnover rate at the resting membrane potential. In order for excitable cells like neurons and muscles to generate electrical signals, they require ion gradients across their plasma membranes. For example, sodium concentrations are much lower inside a cell than outside, and for potassium it is the opposite case. The job of maintaining these ion gradients falls squarely on a single protein: the Na+/K+ pump. During each transport cycle, this enzyme moves three sodium ions out of the cell and imports two of potassium. Because this process is the foundation for so many physiological processes, the Na+/K+ pump is costly to operate, using ∼30% of the ATP generated by an organism. Proper regulation of its turnover rate is vital. In this work, we use the giant nerve cell of squid as a model to show that the Na+/K+ pump can be regulated by an unsuspected mechanism. Although the gene that codes for this enzyme can make a perfectly functional pump, sometimes its information changes as it passes through the messenger RNA. This is achieved by editing RNA and as a result subtly different versions of the pump can be made, differing at only three amino acids out of more than a thousand. We demonstrate that RNA editing modulates the Na+/K+ pump's turnover rate and sodium release.
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Affiliation(s)
- Claudia Colina
- Institute of Neurobiology, University of Puerto Rico–Medical Sciences Campus, San Juan, Puerto Rico
| | - Juan Pablo Palavicini
- Institute of Neurobiology, University of Puerto Rico–Medical Sciences Campus, San Juan, Puerto Rico
| | - Deepa Srikumar
- Molecular Neurophysiology Section, Porter Neuroscience Research Center, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, Maryland, United States of America
| | - Miguel Holmgren
- Molecular Neurophysiology Section, Porter Neuroscience Research Center, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, Maryland, United States of America
- * E-mail: (MH); (JJCR)
| | - Joshua J. C. Rosenthal
- Institute of Neurobiology, University of Puerto Rico–Medical Sciences Campus, San Juan, Puerto Rico
- Department of Biochemistry, University of Puerto Rico–Medical Sciences Campus, San Juan, Puerto Rico
- * E-mail: (MH); (JJCR)
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22
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The effect of holding potential on charge translocation by the Na+/K +-ATPase in the absence of potassium. J Membr Biol 2010; 236:203-14. [PMID: 20697887 DOI: 10.1007/s00232-010-9293-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2010] [Accepted: 07/20/2010] [Indexed: 10/19/2022]
Abstract
The Na(+)/K(+)-ATPase exports 3Na(+) and imports 2K(+) at the expense of the hydrolysis of 1 ATP. In the absence of K(+), it carries on electroneutral, Na(+)-dependent transient charge movement (also known as "electroneutral Na(+)/Na(+) exchange mode") and produces a transient current containing faster and slower components in response to a sudden voltage step. Components with different speeds represent sequential release of Na(+) ions from three binding sites. The effect of holding potential on slow charge movement was studied in the presence of different concentrations of ADP(i), Na (i) (+) and Na (o) (+) with the intention of improving our understanding of Na (i) (+) binding. However, the manipulation of [ADP](i) and [Na(+)](i) did not cause as pronounced changes as predicted in the magnitude of charge movement (Q (tot)), which indicated that our experimental conditions were not able to backwardly drive reaction across the energy barrier to Na (i) (+) release/rebinding steps. On the contrary, lowering [Na(+)](o) caused evident dependence of Q (tot) on holding potential, with characteristics suggesting that pumps were escaping from E2P through the uncoupled Na(+) efflux activity.
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23
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Hu MY, Sucré E, Charmantier-Daures M, Charmantier G, Lucassen M, Himmerkus N, Melzner F. Localization of ion-regulatory epithelia in embryos and hatchlings of two cephalopods. Cell Tissue Res 2010; 339:571-83. [PMID: 20127256 DOI: 10.1007/s00441-009-0921-8] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2009] [Accepted: 12/16/2009] [Indexed: 10/19/2022]
Abstract
The tissue distribution and ontogeny of Na(+)/K(+)-ATPase has been examined as an indicator for ion-regulatory epithelia in whole animal sections of embryos and hatchlings of two cephalopod species: the squid Loligo vulgaris and the cuttlefish Sepia officinalis. This is the first report of the immunohistochemical localization of cephalopod Na(+)/K(+)-ATPase with the polyclonal antibody alpha (H-300) raised against the human alpha1-subunit of Na(+)/K(+)-ATPase. Na(+)/K(+)-ATPase immunoreactivity was observed in several tissues (gills, pancreatic appendages, nerves), exclusively located in baso-lateral membranes lining blood sinuses. Furthermore, large single cells in the gill of adult L. vulgaris specimens closely resembled Na(+)/K(+)-ATPase-rich cells described in fish. Immunohistochemical observations indicated that the amount and distribution of Na(+)/K(+)-ATPase in late cuttlefish embryos was similar to that found in juvenile and adult stages. The ion-regulatory epithelia (e.g., gills, excretory organs) of the squid embryos and paralarvae exhibited less differentiation than adults. Na(+)/K(+)-ATPase activities for whole animals were higher in hatchlings of S. officinalis (157.0 +/- 32.4 micromol g (FM) (-1) h(-1)) than in those of L. vulgaris (31.8 +/- 3.3 micromol g (FM) (-1) h(-1)). S. officinalis gills and pancreatic appendages achieved activities of 94.8 +/- 18.5 and 421.8 +/- 102.3 micromol(ATP) g (FM) (-1) h(-1), respectively. High concentrations of Na(+)/K(+)-ATPase in late cephalopod embryos might be important in coping with the challenging abiotic conditions (low pH, high pCO(2)) that these organisms encounter inside their eggs. Our results also suggest a higher sensitivity of squid vs. cuttlefish embryos to environmental acid-base disturbances.
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Affiliation(s)
- Marian Y Hu
- Leibniz Institute of Marine Sciences, Kiel, Germany.
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24
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Abstract
Cellular electrophysiological systems, like developmental systems, appear to evolve primarily by means of regulatory evolution. It is suggested that electrophysiological systems share two key features with developmental systems that account for this dependence on regulatory evolution. For both systems, structural evolution has the potential to create significant problems of pleiotropy and both systems are predominantly computational in nature. It is concluded that the relative balance of physical and computational tasks that a biological system has to perform, combined with the probability that these tasks may have to change significantly during the course of evolution, will be major factors in determining the relative mix of regulatory and structural evolution that is observed for a given system. Physiological systems that directly interface with the environment will almost always perform some low-level physical task. In the majority of cases this will require evolution of protein function in order for the tasks themselves to evolve. For complex physiological systems a large fraction of their function will be devoted to high-level control functions that are predominantly computational in nature. In most cases regulatory evolution will be sufficient in order for these computational tasks to evolve.
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Affiliation(s)
- Barbara Rosati
- Department of Physiology and Biophysics, Institute of Molecular Cardiology, Stony Brook University, Stony Brook, NY 11794, USA
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25
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Babavali M, Esmann M, Fedosova NU, Marsh D. Urea-Induced Unfolding of Na,K-ATPase As Evaluated by Electron Paramagnetic Resonance Spectroscopy. Biochemistry 2009; 48:9022-30. [DOI: 10.1021/bi901124j] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Mohammad Babavali
- Department of Physiology and Biophysics, Aarhus University, Aarhus, Denmark
| | - Mikael Esmann
- Department of Physiology and Biophysics, Aarhus University, Aarhus, Denmark
| | | | - Derek Marsh
- Max-Planck-Institut für biophysikalische Chemie, Abt. Spektroskopie, 37077 Göttingen, Germany
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26
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Sáez AG, Lozano E, Zaldívar-Riverón A. Evolutionary history of Na,K-ATPases and their osmoregulatory role. Genetica 2009; 136:479-90. [PMID: 19214758 DOI: 10.1007/s10709-009-9356-0] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2008] [Accepted: 01/26/2009] [Indexed: 01/07/2023]
Abstract
The Na/K pump, or Na,K-ATPase, is a key enzyme to the homeostasis of osmotic pressure, cell volume, and the maintenance of electrochemical gradients. Its alpha subunit, which holds most of its functions, belongs to a large family of ATPases known as P-type, and to the subfamily IIC, which also includes H,K-ATPases. In this study, we attempt to describe the evolutionary history of IIC ATPases by doing phylogenetic analysis with most of the currently available protein sequences (over 200), and pay special attention to the relationship between their diversity and their osmoregulatory role. We include proteins derived from many completed or ongoing genome projects, many of whose IIC ATPases have not been phylogenetically analyzed previously. We show that the most likely origin of IIC proteins is prokaryotic, and that many of them are present in non-metazoans, such as algae, protozoans or fungi. We also suggest that the pre-metazoan ancestor, represented by the choanoflagellate Monosiga brevicollis, whose genome has been sequenced, presented at least two IIC-type proteins. One of these proteins would have given rise to most current animal IIC ATPases, whereas the other apparently evolved into a lineage that, so far, has only been found in nematodes. We also propose that early deuterostomes presented a single IIC gene, from which all the extant diversity of vertebrate IIC proteins originated by gene and genome duplications.
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Affiliation(s)
- Alberto G Sáez
- Department of Biodiversity and Evolutionary Biology, Museo Nacional de Ciencias Naturales, CSIC, Madrid, Spain.
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27
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Rakowski RF, Artigas P, Palma F, Holmgren M, De Weer P, Gadsby DC. Sodium flux ratio in Na/K pump-channels opened by palytoxin. ACTA ACUST UNITED AC 2007; 130:41-54. [PMID: 17562821 PMCID: PMC2085370 DOI: 10.1085/jgp.200709770] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
Palytoxin binds to Na+/K+ pumps in the plasma membrane of animal cells and opens an electrodiffusive cation pathway through the pumps. We investigated properties of the palytoxin-opened channels by recording macroscopic and microscopic currents in cell bodies of neurons from the giant fiber lobe, and by simultaneously measuring net current and 22Na+ efflux in voltage-clamped, internally dialyzed giant axons of the squid Loligo pealei. The conductance of single palytoxin-bound “pump-channels” in outside-out patches was ∼7 pS in symmetrical 500 mM [Na+], comparable to findings in other cells. In these high-[Na+], K+-free solutions, with 5 mM cytoplasmic [ATP], the K0.5 for palytoxin action was ∼70 pM. The pump-channels were ∼40–50 times less permeable to N-methyl-d-glucamine (NMG+) than to Na+. The reversal potential of palytoxin-elicited current under biionic conditions, with the same concentration of a different permeant cation on each side of the membrane, was independent of the concentration of those ions over the range 55–550 mM. In giant axons, the Ussing flux ratio exponent (n') for Na+ movements through palytoxin-bound pump-channels, over a 100–400 mM range of external [Na+] and 0 to −40 mV range of membrane potentials, averaged 1.05 ± 0.02 (n = 28). These findings are consistent with occupancy of palytoxin-bound Na+/K+ pump-channels either by a single Na+ ion or by two Na+ ions as might be anticipated from other work; idiosyncratic constraints are needed if the two Na+ ions occupy a single-file pore, but not if they occupy side-by-side binding sites, as observed in related structures, and if only one of the sites is readily accessible from both sides of the membrane.
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Affiliation(s)
- R F Rakowski
- Marine Biological Laboratory, Woods Hole, MA 02543, USA.
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