Particle-resolved topological defects of smectic colloidal liquid crystals in extreme confinement

Stress and alignment response to curved obstacles in growing bacterial monolayers

Monolayers of growing bacteria, confined within channel geometries, exhibit self-organization into a highly aligned laminar state along the axis of the channel. Although this phenomenon has been observed in experiments and simulations under various boundary conditions, the underlying physical mechanism driving this alignment remains unclear. In this study, we conduct simulations of growing bacteria in two-dimensional channel geometries perturbed by fixed obstacles, either circular or arc shaped, placed at the channel's center. Our findings reveal that even sizable obstacles cause only short-ranged disruptions to the baseline laminar state. These disruptions arise from a competition between local planar anchoring and bulk laminar alignment. At smaller obstacle sizes, bulk alignment fully dominates, while at larger sizes planar anchoring induces increasing local disruptions. Furthermore, our analysis indicates that the resulting configurations of the bacterial system display a striking resemblance to the arrangement of hard-rod smectic liquid crystals around circular obstacles. This suggests that modeling hard-rod bacterial monolayers as smectic, rather than nematic, liquid crystals may yield successful outcomes. The insights gained from our study contribute to the expanding body of research on bacterial growth in channels. Our work provides perspectives on the stability of the laminar state and extends our understanding to encompass more intricate confinement schemes.

Multistate Dynamic Pathways for Anisotropic Colloidal Assembly and Reconfiguration

We report the controlled interfacial assembly and reconfiguration of rectangular prism colloidal particles between microstructures of varying positional and orientational order including stable, metastable, and transient states. Structurally diverse states are realized by programming time dependent electric fields that mediate dipolar interactions determining particle position, orientation, compression, and chaining. We identify an order parameter set that defines each state as a combination of the positional and orientational order. These metrics are employed as reaction coordinates to capture the microstructure evolution between initial and final states upon field changes. Assembly trajectory manifolds between states in the low-dimensional reaction coordinate space reveal a dynamic pathway map including information about pathway accessibility, reversibility, and kinetics. By navigating the dynamic pathway map, we demonstrate reconfiguration between states on minute time scales, which is practically useful for particle-based materials processing and device responses. Our findings demonstrate a conceptually general approach to discover dynamic pathways as a basis to control assembly and reconfiguration of self-organizing building blocks that respond to global external stimuli.

Elastic response of colloidal smectic liquid crystals: Insights from microscopic theory

Elongated colloidal rods at sufficient packing conditions are known to form stable lamellar or smectic phases. Using a simplified volume-exclusion model, we propose a generic equation of state for hard-rod smectics that is robust against simulation results and is independent of the rod aspect ratio. We then extend our theory by exploring the elastic properties of a hard-rod smectic, including the layer compressibility (B) and bending modulus (K_{1}). By introducing weak backbone flexibility we are able to compare our predictions with experimental results on smectics of filamentous virus rods (fd) and find quantitative agreement between the smectic layer spacing, the out-of-plane fluctuation strength, as well as the smectic penetration length λ=sqrt[K_{1}/B]. We demonstrate that the layer bending modulus is dominated by director splay and depends sensitively on lamellar out-of-plane fluctuations that we account for on the single-rod level. We find that the ratio between the smectic penetration length and the lamellar spacing is about two orders of magnitude smaller than typical values reported for thermotropic smectics. We attribute this to the fact that colloidal smectics are considerably softer in terms of layer compression than their thermotropic counterparts while the cost of layer bending is of comparable magnitude.

External field induced defect transformation in circular confined Gay-Berne liquid crystals

Normally, defects in two-dimensional, circular, confined liquid crystals can be classified into four types based on the position of singularities formed by liquid crystal molecules, i.e., the singularities located inside the circle, at the boundary, outside the circle, and outside the circle at infinity. However, it is considered difficult for small aspect ratio liquid crystals to generate all these four types of defects. In this study, we use molecular dynamics simulation to investigate the defect formed in Gay-Berne, ellipsoidal liquid crystals, with small aspect ratios confined in a circular cavity. As expected, we only find two types of defects (inside the circle and at the boundary) in circular, confined, Gay-Berne ellipsoids under static conditions at various densities, aspect ratios, and interactions between the wall and liquid crystals. However, when introducing an external field to the system, four types of defects can be observed. With increasing the strength of the external field, the singularities in the circular, confined system change from the inside to the boundary and the outside, and the farthest position that the singularities can reach depends on the strength of the external field. We further introduce an alternating, triangular wave, external field to the system to check if we can observe the transformation of different defects within an oscillating period. We find that the position of the singularities greatly depends on the oscillating intensity and oscillating period. By changing the oscillating intensity and oscillating period of the external field, the defect types can be adjusted, and the transformation between different defects can be easily observed. This provides a feasible way to modulate liquid crystal defects and investigate the transformation between different defects.

Complex-tensor theory of simple smectics

Matter self-assembling into layers generates unique properties, including structures of stacked surfaces, directed transport, and compact area maximization that can be highly functionalized in biology and technology. Smectics represent the paradigm of such lamellar materials - they are a state between fluids and solids, characterized by both orientational and partial positional ordering in one layering direction, making them notoriously difficult to model, particularly in confining geometries. We propose a complex tensor order parameter to describe the local degree of lamellar ordering, layer displacement and orientation of the layers for simple, lamellar smectics. The theory accounts for both dislocations and disclinations, by regularizing singularities within defect cores and so remaining continuous everywhere. The ability to describe disclinations and dislocation allows this theory to simulate arrested configurations and inclusion-induced local ordering. This tensorial theory for simple smectics considerably simplifies numerics, facilitating studies on the mesoscopic structure of topologically complex systems.

Perspective: New directions in dynamical density functional theory

Classical dynamical density functional theory (DDFT) has become one of the central modeling approaches in nonequilibrium soft matter physics. Recent years have seen the emergence of novel and interesting fields of application for DDFT. In particular, there has been a remarkable growth in the amount of work related to chemistry. Moreover, DDFT has stimulated research on other theories such as phase field crystal models and power functional theory. In this perspective, we summarize the latest developments in the field of DDFT and discuss a variety of possible directions for future research.

Effect of combined roundness and polydispersity on the phase behavior of hard-rectangle fluids

We introduce a model for a fluid of polydisperse rounded hard rectangles where the length and width of the rectangular core are fixed, while the roundness is taken into account by the convex envelope of a disk displaced along the perimeter of the core. The diameter of the disk has a continuous polydispersity described by a Schulz distribution function. We implemented the scaled particle theory for this model with the aim of studying: (i) the effect of roundness on the phase behavior of the one-component hard-rectangle fluid and (ii) how polydispersity affects phase transitions between isotropic, nematic, and tetratic phases. We found that roundness greatly affects the tetratic phase, whose region of stability in the phase diagram strongly decreases as the roundness parameter is increased. Also, the interval of aspect ratios where the tetratic-nematic and isotropic-nematic phase transitions are of first order considerably reduces with roundness, both transitions becoming weaker. Polydispersity induces strong fractionation between the coexisting phases, with the nematic phase enriched in particles of lower roundness. Finally, for high enough polydispersity and certain mean aspect ratios, the isotropic-to-nematic transition can change from second (for the one-component fluid) to first order. We also found a packing-fraction inversion phenomenon for large polydispersities: the coexisting isotropic phase has a higher packing fraction than the nematic.

Topological fine structure of smectic grain boundaries and tetratic disclination lines within three-dimensional smectic liquid crystals

Observing and characterizing the complex ordering phenomena of liquid crystals subjected to external constraints constitutes an ongoing challenge for chemists and physicists alike. To elucidate the delicate balance appearing when the intrinsic positional order of smectic liquid crystals comes into play, we perform Monte-Carlo simulations of rod-like particles in a range of cavities with a cylindrical symmetry. Based on recent insights into the topology of smectic orientational grain boundaries in two dimensions, we analyze the emerging three-dimensional defect structures from the perspective of tetratic symmetry. Using an appropriate three-dimensional tetratic order parameter constructed from the Steinhardt order parameters, we show that those grain boundaries can be interpreted as a pair of tetratic disclination lines that are located on the edges of the nematic domain boundary. Thereby, we shed light on the fine structure of grain boundaries in three-dimensional confined smectics.

Structural properties and ring defect formation in discotic liquid crystal nanodroplets

In this work, we performedNpTMonte Carlo simulations of a Gay-Berne discotic liquid crystal confined in a spherical droplet under face-on anchoring and fixed pressure. We find that, in contrast to the unbounded system, a plot of the order parameter as function of temperature does not show a clear evidence of a first-order isotropic-nematic transition. We also find that the impossibility of simultaneously satisfy the uniform director field requirement of a nematic phase with the radial boundary conditions, results in the appearance of a ring disclination line as a stress release mechanism in the interior of the droplet. Under further cooling, a columnar phase appears at the center of the droplet.

Defect patterns of two-dimensional nematic liquid crystals in confinement

A two-dimensional or quasi-two-dimensional nematic liquid crystal refers to a surface-confined system. When such a system is further confined by external line boundaries or excluded from internal line boundaries, the nematic directors form a deformed texture that may display defect points or defect lines, for which winding numbers can be clearly defined. Here, a particular attention is paid to the case when the liquid crystal molecules prefer to form a boundary nematic texture in parallel to the wall surface (i.e., following the homogeneous boundary condition). A general theory, based on geometric argument, is presented for the relationship between the sum of all winding numbers in the system (the total winding number) and the type of confinement angles and curved segments. The conclusion is validated by comparing the theoretical defect rule with existing nematic textures observed experimentally and theoretically in recent years.

Failure of standard density functional theory to describe the phase behavior of a fluid of hard right isosceles triangles

A fluid of hard right isosceles triangles was studied using an extension of scaled-particle density-functional theory which includes the exact third virial coefficient. We show that the only orientationally ordered stable liquid-crystal phase predicted by the theory is the uniaxial nematic phase, in agreement with the second-order virial theory. By contrast, Monte Carlo simulations predict exotic liquid-crystal phases exhibiting tetratic and octatic correlations, with orientational distribution functions having four and eight equivalent peaks, respectively. This demonstrates the failure of the standard density-functional theory based on two- and three-body correlations to describe high-symmetry orientational phases in two-dimensional hard right-triangle fluids, and it points to the necessity to reformulate the theory to take into account high-order body correlations and ultimately particle self-assembling and clustering effects. This avenue may represent a great challenge for future research, and we discuss some fundamental ideas to construct a modified version of density-functional theory to account for these clustering effects.

Dynamic Kerr and Pockels electro-optics of liquid crystals in nanopores for active photonic metamaterials

Photonic metamaterials with properties unattainable in base materials are already beginning to revolutionize optical component design. However, their exceptional characteristics are often static, as artificially engineered into the material during the fabrication process. This limits their application for in-operando adjustable optical devices and active optics in general. Here, for a hybrid material consisting of a liquid crystal-infused nanoporous solid, we demonstrate active and dynamic control of its meta-optics by applying alternating electric fields parallel to the long axes of its cylindrical pores. First-harmonic Pockels and second-harmonic Kerr birefringence responses, strongly depending on the excitation frequency and temperature, are observed in a frequency range from 50 Hz to 50 kHz. This peculiar behavior is quantitatively traced by a Landau-De Gennes free energy analysis to an order-disorder orientational transition of the rod-like mesogens and intimately related changes in the molecular mobilities and polar anchoring at the solid walls on the single-pore, meta-atomic scale. Thus, our study provides evidence that liquid crystal-infused nanopores exhibit integrated multi-physical couplings and reversible phase changes that make them particularly promising for the design of photonic metamaterials with thermo-electrically tunable birefringence in the emerging field of space-time metamaterials aiming at full spatio-temporal control of light.

Topology of Orientational Defects in Confined Smectic Liquid Crystals

We propose a general formalism to characterize orientational frustration of smectic liquid crystals in confinement by interpreting the emerging networks of grain boundaries as objects with a topological charge. In a formal idealization, this charge is distributed in pointlike units of quarter-integer magnitude, which we identify with tetratic disclinations located at the end points and nodes. This coexisting nematic and tetratic order is analyzed with the help of extensive Monte Carlo simulations for a broad range of two-dimensional confining geometries as well as colloidal experiments, showing how the observed defect networks can be universally reconstructed from simple building blocks. We further find that the curvature of the confining wall determines the anchoring behavior of grain boundaries, such that the number of nodes in the emerging networks and the location of their end points can be tuned by changing the number and smoothness of corners, respectively.

Defect Structures of Magnetic Nanoparticles in Smectic A Liquid Crystals

Topological defects in anisotropic fluids like liquid crystals serve as a playground for the research of various effects. In this study, we concentrated on a hybrid system of chiral rod-like molecules doped by magnetic nanoparticles. In textures of the smectic A phase, we observed linear defects and found that clusters of nanoparticles promote nucleation of smectic layer defects just at the phase transition from the isotropic to the smectic A (SmA) phase. In different geometries, we studied and analysed creation of defects which can be explained by attractive elastic forces between nanoparticles in the SmA phase. On cooling the studied hybrid system, clusters grow up to the critical dimension, and the smectic texture is stabilised. The presented effects are theoretically described and explained if we consider the elastic interaction of two point defects and stabilisation of prismatic dislocation loops due to the presence of nanoparticles.