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Ma X, Vanneste S, Chang J, Ambrosino L, Barry K, Bayer T, Bobrov AA, Boston L, Campbell JE, Chen H, Chiusano ML, Dattolo E, Grimwood J, He G, Jenkins J, Khachaturyan M, Marín-Guirao L, Mesterházy A, Muhd DD, Pazzaglia J, Plott C, Rajasekar S, Rombauts S, Ruocco M, Scott A, Tan MP, Van de Velde J, Vanholme B, Webber J, Wong LL, Yan M, Sung YY, Novikova P, Schmutz J, Reusch TBH, Procaccini G, Olsen JL, Van de Peer Y. Seagrass genomes reveal ancient polyploidy and adaptations to the marine environment. NATURE PLANTS 2024; 10:240-255. [PMID: 38278954 PMCID: PMC7615686 DOI: 10.1038/s41477-023-01608-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/31/2023] [Accepted: 12/05/2023] [Indexed: 01/28/2024]
Abstract
We present chromosome-level genome assemblies from representative species of three independently evolved seagrass lineages: Posidonia oceanica, Cymodocea nodosa, Thalassia testudinum and Zostera marina. We also include a draft genome of Potamogeton acutifolius, belonging to a freshwater sister lineage to Zosteraceae. All seagrass species share an ancient whole-genome triplication, while additional whole-genome duplications were uncovered for C. nodosa, Z. marina and P. acutifolius. Comparative analysis of selected gene families suggests that the transition from submerged-freshwater to submerged-marine environments mainly involved fine-tuning of multiple processes (such as osmoregulation, salinity, light capture, carbon acquisition and temperature) that all had to happen in parallel, probably explaining why adaptation to a marine lifestyle has been exceedingly rare. Major gene losses related to stomata, volatiles, defence and lignification are probably a consequence of the return to the sea rather than the cause of it. These new genomes will accelerate functional studies and solutions, as continuing losses of the 'savannahs of the sea' are of major concern in times of climate change and loss of biodiversity.
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Affiliation(s)
- Xiao Ma
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium
- Center for Plant Systems Biology, VIB, Ghent, Belgium
| | - Steffen Vanneste
- Department of Plants and Crops, Faculty of Bioscience Engineering, Ghent University, Ghent, Belgium
| | - Jiyang Chang
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium
- Center for Plant Systems Biology, VIB, Ghent, Belgium
| | - Luca Ambrosino
- Department of Research Infrastructure for Marine Biological Resources, Stazione Zoologica Anton Dohrn, Naples, Italy
| | - Kerrie Barry
- DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA
| | - Till Bayer
- Marine Evolutionary Ecology, GEOMAR Helmholtz-Zentrum für Ozeanforschung Kiel, Kiel, Germany
| | | | - LoriBeth Boston
- Genome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA
| | - Justin E Campbell
- Coastlines and Oceans Division, Institute of Environment, Florida International University-Biscayne Bay Campus, Miami, FL, USA
| | - Hengchi Chen
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium
- Center for Plant Systems Biology, VIB, Ghent, Belgium
| | - Maria Luisa Chiusano
- Department of Research Infrastructure for Marine Biological Resources, Stazione Zoologica Anton Dohrn, Naples, Italy
- Department of Agricultural Sciences, University Federico II of Naples, Naples, Italy
| | - Emanuela Dattolo
- Department of Integrative Marine Ecology, Stazione Zoologica Anton Dohrn, Naples, Italy
- National Biodiversity Future Centre, Palermo, Italy
| | - Jane Grimwood
- Genome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA
| | - Guifen He
- DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA
| | - Jerry Jenkins
- Genome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA
| | - Marina Khachaturyan
- Marine Evolutionary Ecology, GEOMAR Helmholtz-Zentrum für Ozeanforschung Kiel, Kiel, Germany
- Institute of General Microbiology, University of Kiel, Kiel, Germany
| | - Lázaro Marín-Guirao
- Department of Integrative Marine Ecology, Stazione Zoologica Anton Dohrn, Naples, Italy
- Seagrass Ecology Group, Oceanographic Center of Murcia, Spanish Institute of Oceanography (IEO-CSIC), Murcia, Spain
| | - Attila Mesterházy
- Centre for Ecological Research, Wetland Ecology Research Group, Debrecen, Hungary
| | - Danish-Daniel Muhd
- Institute of Climate Adaptation and Marine Biotechnology, Universiti Malaysia Terengganu, Terengganu, Malaysia
| | - Jessica Pazzaglia
- Department of Integrative Marine Ecology, Stazione Zoologica Anton Dohrn, Naples, Italy
- National Biodiversity Future Centre, Palermo, Italy
| | - Chris Plott
- Genome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA
| | | | - Stephane Rombauts
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium
- Center for Plant Systems Biology, VIB, Ghent, Belgium
| | - Miriam Ruocco
- Department of Integrative Marine Ecology, Stazione Zoologica Anton Dohrn, Naples, Italy
- Department of Biological, Geological and Environmental Sciences, University of Bologna, Bologna, Italy
- Fano Marine Center, Fano, Italy
| | - Alison Scott
- Department of Chromosome Biology, Max Planck Institute for Plant Breeding Research, Köln, Germany
| | - Min Pau Tan
- Institute of Climate Adaptation and Marine Biotechnology, Universiti Malaysia Terengganu, Terengganu, Malaysia
| | - Jozefien Van de Velde
- Department of Chromosome Biology, Max Planck Institute for Plant Breeding Research, Köln, Germany
| | - Bartel Vanholme
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium
- Center for Plant Systems Biology, VIB, Ghent, Belgium
| | - Jenell Webber
- Genome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA
| | - Li Lian Wong
- Institute of Climate Adaptation and Marine Biotechnology, Universiti Malaysia Terengganu, Terengganu, Malaysia
| | - Mi Yan
- DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA
| | - Yeong Yik Sung
- Institute of Climate Adaptation and Marine Biotechnology, Universiti Malaysia Terengganu, Terengganu, Malaysia
| | - Polina Novikova
- Department of Chromosome Biology, Max Planck Institute for Plant Breeding Research, Köln, Germany
| | - Jeremy Schmutz
- DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA
- Genome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, USA
| | - Thorsten B H Reusch
- Marine Evolutionary Ecology, GEOMAR Helmholtz-Zentrum für Ozeanforschung Kiel, Kiel, Germany.
| | - Gabriele Procaccini
- Department of Integrative Marine Ecology, Stazione Zoologica Anton Dohrn, Naples, Italy.
- National Biodiversity Future Centre, Palermo, Italy.
| | - Jeanine L Olsen
- Groningen Institute for Evolutionary Life Sciences, University of Groningen, Groningen, the Netherlands.
| | - Yves Van de Peer
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
- Center for Plant Systems Biology, VIB, Ghent, Belgium.
- Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa.
- College of Horticulture, Academy for Advanced Interdisciplinary Studies, Nanjing Agricultural University, Nanjing, China.
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2
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Braun CD, Della Penna A, Arostegui MC, Afonso P, Berumen ML, Block BA, Brown CA, Fontes J, Furtado M, Gallagher AJ, Gaube P, Golet WJ, Kneebone J, Macena BCL, Mucientes G, Orbesen ES, Queiroz N, Shea BD, Schratwieser J, Sims DW, Skomal GB, Snodgrass D, Thorrold SR. Linking vertical movements of large pelagic predators with distribution patterns of biomass in the open ocean. Proc Natl Acad Sci U S A 2023; 120:e2306357120. [PMID: 38150462 PMCID: PMC10666118 DOI: 10.1073/pnas.2306357120] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2023] [Accepted: 09/23/2023] [Indexed: 12/29/2023] Open
Abstract
Many predator species make regular excursions from near-surface waters to the twilight (200 to 1,000 m) and midnight (1,000 to 3,000 m) zones of the deep pelagic ocean. While the occurrence of significant vertical movements into the deep ocean has evolved independently across taxonomic groups, the functional role(s) and ecological significance of these movements remain poorly understood. Here, we integrate results from satellite tagging efforts with model predictions of deep prey layers in the North Atlantic Ocean to determine whether prey distributions are correlated with vertical habitat use across 12 species of predators. Using 3D movement data for 344 individuals who traversed nearly 1.5 million km of pelagic ocean in [Formula: see text]42,000 d, we found that nearly every tagged predator frequented the twilight zone and many made regular trips to the midnight zone. Using a predictive model, we found clear alignment of predator depth use with the expected location of deep pelagic prey for at least half of the predator species. We compared high-resolution predator data with shipboard acoustics and selected representative matches that highlight the opportunities and challenges in the analysis and synthesis of these data. While not all observed behavior was consistent with estimated prey availability at depth, our results suggest that deep pelagic biomass likely has high ecological value for a suite of commercially important predators in the open ocean. Careful consideration of the disruption to ecosystem services provided by pelagic food webs is needed before the potential costs and benefits of proceeding with extractive activities in the deep ocean can be evaluated.
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Affiliation(s)
- Camrin D. Braun
- Biology Department, Woods Hole Oceanographic Institution, Woods Hole, MA02543
| | - Alice Della Penna
- Institute of Marine Science, University of Auckland, Auckland1010, New Zealand
- School of Biological Sciences, University of Auckland, Auckland1010, New Zealand
| | - Martin C. Arostegui
- Biology Department, Woods Hole Oceanographic Institution, Woods Hole, MA02543
| | - Pedro Afonso
- Institute of Marine Sciences - OKEANOS, University of the Azores, Horta9901-862, Portugal
| | - Michael L. Berumen
- Red Sea Research Center, Division of Biological and Environmental Science and Engineering, King Abdullah University of Science and Technology, Thuwal23955, Kingdom of Saudi Arabia
| | - Barbara A. Block
- Hopkins Marine Station, Stanford University, Pacific Grove, CA93950
| | - Craig A. Brown
- National Oceanic and Atmospheric Administration Fisheries, Southeast Fisheries Science Center, Miami, FL33149
| | - Jorge Fontes
- Institute of Marine Sciences - OKEANOS, University of the Azores, Horta9901-862, Portugal
| | - Miguel Furtado
- Institute of Marine Sciences - OKEANOS, University of the Azores, Horta9901-862, Portugal
| | | | - Peter Gaube
- Applied Physics Laboratory–University of Washington, Seattle, WA98105
| | - Walter J. Golet
- The School of Marine Sciences, The University of Maine, Orono, ME04469
- The Gulf of Maine Research Institute, Portland, ME04101
| | - Jeff Kneebone
- Anderson Cabot Center for Ocean Life at the New England Aquarium, Boston, MA02110
| | - Bruno C. L. Macena
- Institute of Marine Sciences - OKEANOS, University of the Azores, Horta9901-862, Portugal
| | - Gonzalo Mucientes
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Universidade do Porto, Vairão4485-661, Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Vairão4485-661, Portugal
| | - Eric S. Orbesen
- National Oceanic and Atmospheric Administration Fisheries, Southeast Fisheries Science Center, Miami, FL33149
| | - Nuno Queiroz
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Universidade do Porto, Vairão4485-661, Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Vairão4485-661, Portugal
| | | | | | - David W. Sims
- Marine Biological Association, PlymouthPL1 2PB, United Kingdom
- Ocean and Earth Science, National Oceanography Centre Southampton, University of Southampton, SouthamptonSO14 3ZH, United Kingdom
| | | | - Derke Snodgrass
- National Oceanic and Atmospheric Administration Fisheries, Southeast Fisheries Science Center, Miami, FL33149
| | - Simon R. Thorrold
- Biology Department, Woods Hole Oceanographic Institution, Woods Hole, MA02543
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3
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Kaidarova A, Geraldi NR, Wilson RP, Kosel J, Meekan MG, Eguíluz VM, Hussain MM, Shamim A, Liao H, Srivastava M, Saha SS, Strano MS, Zhang X, Ooi BS, Holton M, Hopkins LW, Jin X, Gong X, Quintana F, Tovasarov A, Tasmagambetova A, Duarte CM. Wearable sensors for monitoring marine environments and their inhabitants. Nat Biotechnol 2023; 41:1208-1220. [PMID: 37365259 DOI: 10.1038/s41587-023-01827-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2021] [Accepted: 05/12/2023] [Indexed: 06/28/2023]
Abstract
Human societies depend on marine ecosystems, but their degradation continues. Toward mitigating this decline, new and more effective ways to precisely measure the status and condition of marine environments are needed alongside existing rebuilding strategies. Here, we provide an overview of how sensors and wearable technology developed for humans could be adapted to improve marine monitoring. We describe barriers that have slowed the transition of this technology from land to sea, update on the developments in sensors to advance ocean observation and advocate for more widespread use of wearables on marine organisms in the wild and in aquaculture. We propose that large-scale use of wearables could facilitate the concept of an 'internet of marine life' that might contribute to a more robust and effective observation system for the oceans and commercial aquaculture operations. These observations may aid in rationalizing strategies toward conservation and restoration of marine communities and habitats.
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Affiliation(s)
- Altynay Kaidarova
- Red Sea Research Center and Computational Biosciences Research Center, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia.
- Central Asian Institute of Ecological Research, Almaty, Kazakhstan.
| | - Nathan R Geraldi
- Red Sea Research Center and Computational Biosciences Research Center, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
- NatureMetrics, Guildford, UK
| | - Rory P Wilson
- Biosciences, College of Science, Swansea University, Swansea, UK
| | - Jürgen Kosel
- Computer, Electrical and Mathematical Sciences and Engineering, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
- Sensors Systems Division, Silicon Austria Labs, High Tech Campus, Villach, Austria
| | - Mark G Meekan
- Australian Institute of Marine Science, the Indian Ocean Marine Research Centre, University of Western Australia, Oceans Institute, Crawley, Western Australia, Australia
| | - Víctor M Eguíluz
- Instituto de Física Interdisciplinary Sistemas Complejos IFISC (CSIC-UIB), Palma de Mallorca, Spain
| | | | - Atif Shamim
- Computer, Electrical and Mathematical Sciences and Engineering, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
| | - Hanguang Liao
- Computer, Electrical and Mathematical Sciences and Engineering, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
| | - Mani Srivastava
- Electrical and Computer Engineering Department, University of California, Los Angeles, CA, USA
| | - Swapnil Sayan Saha
- Electrical and Computer Engineering Department, University of California, Los Angeles, CA, USA
| | - Michael S Strano
- Department of Chemical Engineering and Division of Comparative Medicine, Massachusetts Institute of Technology, Cambridge, MA, USA
| | - Xiangliang Zhang
- Computer, Electrical and Mathematical Sciences and Engineering, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
| | - Boon S Ooi
- Computer, Electrical and Mathematical Sciences and Engineering, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
| | - Mark Holton
- Biosciences, College of Science, Swansea University, Swansea, UK
| | - Lloyd W Hopkins
- Biosciences, College of Science, Swansea University, Swansea, UK
| | - Xiaojia Jin
- Department of Chemical Engineering and Division of Comparative Medicine, Massachusetts Institute of Technology, Cambridge, MA, USA
| | - Xun Gong
- Department of Chemical Engineering and Division of Comparative Medicine, Massachusetts Institute of Technology, Cambridge, MA, USA
| | - Flavio Quintana
- Instituto de Biología de Organismos Marinos (IBIOMAR), CONICET, Puerto Madryn, Argentina
| | | | | | - Carlos M Duarte
- Red Sea Research Center and Computational Biosciences Research Center, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
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4
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Montero-Hidalgo M, Tuya F, Otero-Ferrer F, Haroun R, Santos-Martín F. Mapping and assessing seagrass meadows changes and blue carbon under past, current, and future scenarios. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 872:162244. [PMID: 36796703 DOI: 10.1016/j.scitotenv.2023.162244] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2022] [Revised: 02/10/2023] [Accepted: 02/10/2023] [Indexed: 06/18/2023]
Abstract
Seagrasses store large amounts of blue carbon and mitigate climate change, but they have suffered strong regressions worldwide in recent decades. Blue carbon assessments may support their conservation. However, existing blue carbon maps are still scarce and focused on certain seagrass species, such as the iconic genus Posidonia, and intertidal and very shallow seagrasses (<10 m depth), while deep-water and opportunistic seagrasses have remained understudied. This study filled this gap by mapping and assessing blue carbon storage and sequestration by the seagrass Cymodocea nodosa in the Canarian archipelago using the local carbon storage capacity and high spatial resolution (20 m/pixel) seagrass distribution maps for the years 2000 and 2018. Particularly, we mapped and assessed the past, current and future capacity of C. nodosa to store blue carbon, according to four plausible future scenarios, and valued the economic implications of these scenarios. Our results showed that C. nodosa has suffered ca. 50 % area loss in the last two decades, and, if the current degradation rate continues, our estimations demonstrate that it could completely disappear in 2036 ("Collapse scenario"). The impact of these losses in 2050 would reach 1.43 MT of CO2 equivalent emitted with a cost of 126.3 million € (0.32 % of the current Canary GDP). If, however, this degradation is slow down, between 0.11 and 0.57 MT of CO2 equivalent would be emitted until 2050 ("Intermediate" and "Business-as-usual" scenarios, respectively), which corresponds to a social cost of 3.63 and 44.81 million €, respectively. If the current seagrass extension is maintained ("No Net Loss"), 0.75 MT of CO2 equivalent would be sequestered from now to 2050, which corresponds to a social cost saving of 73.59 million €. The reproducibility of our methodology across coastal ecosystems underpinned by marine vegetation provides a key tool for decision-making and conservation of these habitats.
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Affiliation(s)
- Miriam Montero-Hidalgo
- Rey Juan Carlos University, Chemical and Environmental Technology Department, Madrid, Spain.
| | - Fernando Tuya
- Biodiversity and Conservation Research Group, IU-ECOAQUA, Universidad de Las Palmas de Gran Canaria, Telde, Spain
| | - Francisco Otero-Ferrer
- Biodiversity and Conservation Research Group, IU-ECOAQUA, Universidad de Las Palmas de Gran Canaria, Telde, Spain
| | - Ricardo Haroun
- Biodiversity and Conservation Research Group, IU-ECOAQUA, Universidad de Las Palmas de Gran Canaria, Telde, Spain
| | - Fernando Santos-Martín
- Rey Juan Carlos University, Chemical and Environmental Technology Department, Madrid, Spain
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5
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Shipley ON, Matich P, Hussey NE, Brooks AML, Chapman D, Frisk MG, Guttridge AE, Guttridge TL, Howey LA, Kattan S, Madigan DJ, O'Shea O, Polunin NV, Power M, Smukall MJ, Schneider EVC, Shea BD, Talwar BS, Winchester M, Brooks EJ, Gallagher AJ. Energetic connectivity of diverse elasmobranch populations - implications for ecological resilience. Proc Biol Sci 2023; 290:20230262. [PMID: 37040803 PMCID: PMC10089721 DOI: 10.1098/rspb.2023.0262] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2022] [Accepted: 03/08/2023] [Indexed: 04/13/2023] Open
Abstract
Understanding the factors shaping patterns of ecological resilience is critical for mitigating the loss of global biodiversity. Throughout aquatic environments, highly mobile predators are thought to serve as important vectors of energy between ecosystems thereby promoting stability and resilience. However, the role these predators play in connecting food webs and promoting energy flow remains poorly understood in most contexts. Using carbon and nitrogen isotopes, we quantified the use of several prey resource pools (small oceanic forage, large oceanics, coral reef, and seagrass) by 17 species of elasmobranch fishes (n = 351 individuals) in The Bahamas to determine their functional diversity and roles as ecosystem links. We observed remarkable functional diversity across species and identified four major groups responsible for connecting discrete regions of the seascape. Elasmobranchs were responsible for promoting energetic connectivity between neritic, oceanic and deep-sea ecosystems. Our findings illustrate how mobile predators promote ecosystem connectivity, underscoring their functional significance and role in supporting ecological resilience. More broadly, strong predator conservation efforts in developing island nations, such as The Bahamas, are likely to yield ecological benefits that enhance the resilience of marine ecosystems to combat imminent threats such as habitat degradation and climate change.
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Affiliation(s)
| | | | - Nigel E. Hussey
- Department of Integrative Biology, University of Windsor, Ontario, Canada
| | - Annabelle M. L. Brooks
- Cape Eleuthera Institute, Cape Eleuthera, Eleuthera, The Bahamas
- Oceanic Whitetip Shark Consortium, Ellicott City, MD, USA
- College of Life and Environmental Sciences, University of Exeter, Exeter, UK
| | | | - Michael G. Frisk
- School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY, USA
| | | | | | - Lucy A. Howey
- Oceanic Whitetip Shark Consortium, Ellicott City, MD, USA
- College of Life and Environmental Sciences, University of Exeter, Exeter, UK
| | - Sami Kattan
- Beneath The Waves, PO Box 126, Herndon, VA, USA
| | - Daniel J. Madigan
- Department of Integrative Biology, University of Windsor, Ontario, Canada
| | - Owen O'Shea
- The Center for Ocean Research and Education (CORE), Gregory Town, Eleuthera, The Bahamas
| | - Nicholas V. Polunin
- Department of Environmental Sciences, Newcastle University, Newcastle Upon Tyne, UK
| | - Michael Power
- Department of Biology, University of Waterloo, Ontario, Canada
| | | | | | - Brendan D. Shea
- Beneath The Waves, PO Box 126, Herndon, VA, USA
- Department of Fish and Wildlife Conservation, Virginia Tech, Blacksburg, VA, USA
| | - Brendan S. Talwar
- Cape Eleuthera Institute, Cape Eleuthera, Eleuthera, The Bahamas
- Oceanic Whitetip Shark Consortium, Ellicott City, MD, USA
- Department of Biological Sciences, Institute of Environment, Florida International University, Miami, FL, USA
| | | | - Edward J. Brooks
- Cape Eleuthera Institute, Cape Eleuthera, Eleuthera, The Bahamas
- Oceanic Whitetip Shark Consortium, Ellicott City, MD, USA
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6
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Li Y, Fu C, Hu J, Zeng L, Tu C, Luo Y. Soil Carbon, Nitrogen, and Phosphorus Stoichiometry and Fractions in Blue Carbon Ecosystems: Implications for Carbon Accumulation in Allochthonous-Dominated Habitats. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2023; 57:5913-5923. [PMID: 36996086 DOI: 10.1021/acs.est.3c00012] [Citation(s) in RCA: 10] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/19/2023]
Abstract
Blue carbon ecosystems (BCEs) including mangroves, saltmarshes, and seagrasses are highly efficient for organic carbon (OC) accumulation due to their unique ability to trap high rates of allochthonous substrates. It has been suggested that the magnitude of OC preservation is constrained by nitrogen (N) and phosphorus (P) limitation in response to climate and anthropogenic changes. However, little is known about the connection of soil OC with N-P and their forms in response to allochthonous inputs in BCEs. By analyzing soil OC, N, and P densities of BCEs from 797 sites globally, we find that, in China, where allochthonous OC provides 50-75% of total OC, soil C/P and N/P ratios are 4- to 8-fold lower than their global means, and 23%, 29%, and 20% of buried OC, N, and P are oxidation-resistant fractions that linked with minerals. We estimate that the OC stocks in China should double over the next 40 years under high allochthonous inputs and elevated N/P ratio scenarios during BCE restoration. Allochthonous-dominated BCEs thus have the capacity to enhance refractory and mineral bound organic matter accumulation. Protection and restoration of such BCEs will provide long-term mitigating benefits against sea level rise and greenhouse gas emissions.
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Affiliation(s)
- Yuan Li
- CAS Key Laboratory of Coastal Environmental Processes and Ecological Remediation, Yantai Institute of Coastal Zone Research (YIC), Chinese Academy of Sciences (CAS); Shandong Key Laboratory of Coastal Environmental Processes, YICCAS, Yantai 264003, P. R. China
| | - Chuancheng Fu
- CAS Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences (CAS), Nanjing 210008, P. R. China
| | - Jian Hu
- Key Laboratory of Coastal Salt Marsh Ecosystems and Resources, Ministry of Natural Resources, Jiangsu Geological Bureau, Nanjing 210018, P. R. China
| | - Lin Zeng
- School of Resources and Environmental Engineering, Ludong University, Yantai 264025, P. R. China
| | - Chen Tu
- CAS Key Laboratory of Coastal Environmental Processes and Ecological Remediation, Yantai Institute of Coastal Zone Research (YIC), Chinese Academy of Sciences (CAS); Shandong Key Laboratory of Coastal Environmental Processes, YICCAS, Yantai 264003, P. R. China
- CAS Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences (CAS), Nanjing 210008, P. R. China
| | - Yongming Luo
- CAS Key Laboratory of Coastal Environmental Processes and Ecological Remediation, Yantai Institute of Coastal Zone Research (YIC), Chinese Academy of Sciences (CAS); Shandong Key Laboratory of Coastal Environmental Processes, YICCAS, Yantai 264003, P. R. China
- CAS Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences (CAS), Nanjing 210008, P. R. China
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7
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Li Y, Bai J, Chen S, Chen B, Zhang L. Mapping seagrasses on the basis of Sentinel-2 images under tidal change. MARINE ENVIRONMENTAL RESEARCH 2023; 185:105880. [PMID: 36682175 DOI: 10.1016/j.marenvres.2023.105880] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2022] [Revised: 01/07/2023] [Accepted: 01/10/2023] [Indexed: 06/17/2023]
Abstract
Tidal variations make the water bodies in satellite remote sensing images on different shooting dates have different inundation ranges and depths. Although the underwater substrates do not change, the spectral properties differ due to attenuation effects. These differences have an impact on the results when multi-temporal remote sensing images are used to analyze seagrasses. This paper proposes a remote sensing mapping method for seagrasses taking the tidal influence, using the seagrasses growth area in Xincun Bay, Hainan Province, China as a case study. a) The seagrasses growth area was determined from remote sensing images. The seagrasses were divided into two types: the seagrasses exposed to water surface or tidal flats (non-submerged seagrasses) and the seagrasses submerged in water (submerged seagrasses). b) The spectral features of seagrasses in Sentienl-2 image were analyzed. We found that the spectral characteristics of non-submerged seagrasses were similar to terrestrial vegetation and these seagrasses could be extracted by using NDVI. The submerged seagrasses spectral was different, forming a reflection peak at the first vegetation red edge band (i.e.705 nm) in Sentinel-2 images. This reflection peak was used to design the Submerged Seagrasses Identification Index (SSII) for extracting underwater seagrass. c) The extraction results of non-submerged seagrasses and submerged seagrasses were merged to map the seagrasses in the study area. The experimental results show that the mapping method proposed in this study can fully consider the influence of tidal changes in remote sensing images on seagrasses identification. The SSII constructed based on Sentinel-2 images extracted submerged seagrasses effectively. This study will provide references to remote sensing mapping of seagrasses and integrated ecological management in coastal zones.
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Affiliation(s)
- Yiqiong Li
- School of Geography Science and Geomatics Engineering, Suzhou University of Science and Technology, Suzhou, 215009, China.
| | - Junwu Bai
- School of Geography Science and Geomatics Engineering, Suzhou University of Science and Technology, Suzhou, 215009, China
| | - Shiquan Chen
- Hainan Academy of Ocean and Fisheries Sciences, Haikou, 570100, China
| | - Bowei Chen
- Key Laboratory of Digital Earth Science, Aerospace Information Research Institute, Chinese Academy of Sciences, Beijing, 100094, China
| | - Li Zhang
- Key Laboratory of Digital Earth Science, Aerospace Information Research Institute, Chinese Academy of Sciences, Beijing, 100094, China
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