1
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Karmakar P, Finnegan TJ, Rostam DC, Taneja S, Uçar S, Hansen AL, Moore CE, Hadad CM, Pratumyot K, Parquette JR, Badjić JD. Molecular bowls for inclusion complexation of toxic anticancer drug methotrexate. Chem Sci 2024; 15:10155-10163. [PMID: 38966368 PMCID: PMC11220613 DOI: 10.1039/d3sc05627a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2023] [Accepted: 05/13/2024] [Indexed: 07/06/2024] Open
Abstract
We describe the preparation and study of novel cavitands, molecular bowls 16+ and 26+, as good binders of the anticancer drug methotrexate (MTX). Molecular bowls are comprised of a curved tribenzotriquinacene (TBTQ) core conjugated to three macrocyclic pyridinium units at the top. The cavitands are easily accessible via two synthetic steps from hexabromo-tribenzotriquinacene in 25% yield. As amphiphilic molecules, bowls 16+ and 26+ self-associate in water by the nucleation-to-aggregation pathway (NMR). The bowls are preorganized, having a semi-rigid framework comprising a fixed bottom with a wobbling pyridinium rim (VT NMR and MD). Further studies, both experimental (NMR) and computational (DFT and MCMM), suggested that a folded MTX occupies the cavity of bowls wherein it forms π-π, C-H-π, and ion pairing intermolecular contacts but also undergoes desolvation to give stable binary complexes (μM) in water. Moreover, a computational protocol is introduced to identify docking pose(s) of MTX inside molecular bowls from NMR shielding data. Both molecular bowls have shown in vitro biocompatibility with liver and kidney cell lines (MTS assay). As bowl 26+ is the strongest binder of MTX reported to date, we envision it as an excellent candidate for further studies on the way toward developing an antidote capable of removing MTX from overdosed cancer patients.
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Affiliation(s)
- Pratik Karmakar
- Department of Chemistry and Biochemistry, The Ohio State University 100 West 18th Avenue Columbus Ohio 43210 USA
- Supramolecular Chemistry Research Unit, Department of Chemistry, Faculty of Science, King Mongkut's University of Technology Thonburi 126 Pracha Uthit Road, Bang Mod, Thung Khru Bangkok 10140 Thailand
| | - Tyler J Finnegan
- Department of Chemistry and Biochemistry, The Ohio State University 100 West 18th Avenue Columbus Ohio 43210 USA
| | - Darian C Rostam
- Department of Chemistry and Biochemistry, The Ohio State University 100 West 18th Avenue Columbus Ohio 43210 USA
| | - Sagarika Taneja
- Department of Chemistry and Biochemistry, The Ohio State University 100 West 18th Avenue Columbus Ohio 43210 USA
| | - Sefa Uçar
- Department of Chemistry and Biochemistry, The Ohio State University 100 West 18th Avenue Columbus Ohio 43210 USA
- Atatürk University, Faculty of Science, Department of Chemistry Erzurum 25240 Turkey
| | - Alexandar L Hansen
- Campus Chemical Instrumentation Center, The Ohio State University 100 West 18th Avenue Columbus Ohio 43210 USA
| | - Curtis E Moore
- Department of Chemistry and Biochemistry, The Ohio State University 100 West 18th Avenue Columbus Ohio 43210 USA
| | - Christopher M Hadad
- Department of Chemistry and Biochemistry, The Ohio State University 100 West 18th Avenue Columbus Ohio 43210 USA
| | - Kornkanya Pratumyot
- Supramolecular Chemistry Research Unit, Department of Chemistry, Faculty of Science, King Mongkut's University of Technology Thonburi 126 Pracha Uthit Road, Bang Mod, Thung Khru Bangkok 10140 Thailand
| | - Jon R Parquette
- Department of Chemistry and Biochemistry, The Ohio State University 100 West 18th Avenue Columbus Ohio 43210 USA
| | - Jovica D Badjić
- Department of Chemistry and Biochemistry, The Ohio State University 100 West 18th Avenue Columbus Ohio 43210 USA
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2
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Dong S, Han Y, Tong Z, Wang J, Zhang Y, Li A, Gopalakrishna TY, Tian H, Chi C. Facile synthesis and characterization of aza-bridged all-benzenoid quinoidal figure-eight and cage molecules. Chem Sci 2024; 15:9087-9095. [PMID: 38903229 PMCID: PMC11186326 DOI: 10.1039/d3sc02707d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2023] [Accepted: 04/27/2024] [Indexed: 06/22/2024] Open
Abstract
Synthesis of conjugated compounds with unusual shape-persistent structures remains a challenge. Herein, utilizing thermodynamically reversible intermolecular Friedel-Crafts alkylation, a dynamic covalent chemistry (DCC) reaction, we facilely synthesized a figure-eight shaped macrocycle FEM and cage molecules CATPA/CACz. X-ray crystallographic analysis confirmed the chemical geometries of tetracation FEM4+(PF6 -)4 and hexacation CACz6+(SbF6 -)6. FEM and CATPA displayed higher photoluminescence quantum yield in solid states compared to that in solution, whereas CACz gave the reverse result. DFT calculations showed that fluorescence-related frontier molecular orbital profiles are mainly localized on their arms consisting of a p-quinodimethane (p-QDM) unit and two benzene rings of triphenylamine or carbazole. Owing to their space-confined structures, variable-temperature 1H NMR measurements showed that FEM, CATPA and FEM4+ have intramolecular restricted motion of phenyl rings on their chromophore arms. Accordingly, FEM and CATPA with flexible triphenylamine subunits displayed aggregation-induced emission behavior (AIE), whereas CACz with a rigid carbazole subunits structure showed no AIE behavior.
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Affiliation(s)
- Shaoqiang Dong
- Institute of Molecular Aggregation Science, Department of Chemistry, Tianjin University Tianjin 300072 China
- Department of Chemistry, National University of Singapore 3 Science Drive 3 117543 Singapore
| | - Yi Han
- Department of Chemistry, National University of Singapore 3 Science Drive 3 117543 Singapore
| | - Zekun Tong
- Institute of Molecular Aggregation Science, Department of Chemistry, Tianjin University Tianjin 300072 China
| | - Jinfeng Wang
- Institute of Molecular Aggregation Science, Department of Chemistry, Tianjin University Tianjin 300072 China
| | - Yishan Zhang
- Institute of Molecular Aggregation Science, Department of Chemistry, Tianjin University Tianjin 300072 China
| | - Aisen Li
- Institute of Molecular Aggregation Science, Department of Chemistry, Tianjin University Tianjin 300072 China
| | | | - Hongkun Tian
- State Key Laboratory of Polymer Physics and Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences Changchun 130022 China
| | - Chunyan Chi
- Department of Chemistry, National University of Singapore 3 Science Drive 3 117543 Singapore
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3
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Chen Q, Zhu K. Advancements and strategic approaches in catenane synthesis. Chem Soc Rev 2024; 53:5677-5703. [PMID: 38659402 DOI: 10.1039/d3cs00499f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/26/2024]
Abstract
Catenanes, a distinctive category of mechanically interlocked molecules composed of intertwined macrocycles, have undergone significant advancements since their initial stages characterized by inefficient statistical synthesis methods. Through the aid of molecular recognition processes and principles of self-assembly, a diverse array of catenanes with intricate structures can now be readily accessed utilizing template-directed synthetic protocols. The rapid evolution and emergence of this field have catalyzed the design and construction of artificial molecular switches and machines, leading to the development of increasingly integrated functional systems and materials. This review endeavors to explore the pivotal advancements in catenane synthesis from its inception, offering a comprehensive discussion of the synthetic methodologies employed in recent years. By elucidating the progress made in synthetic approaches to catenanes, our aim is to provide a clearer understanding of the future challenges in further advancing catenane chemistry from a synthetic perspective.
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Affiliation(s)
- Qing Chen
- School of Chemistry, Sun Yat-Sen University, Guangzhou, 510275, China.
| | - Kelong Zhu
- School of Chemistry, Sun Yat-Sen University, Guangzhou, 510275, China.
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4
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Cortés-Martínez A, von Baeckmann C, Hernández-López L, Carné-Sánchez A, Maspoch D. Giant oligomeric porous cage-based molecules. Chem Sci 2024; 15:7992-7998. [PMID: 38817590 PMCID: PMC11134396 DOI: 10.1039/d4sc01974a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2024] [Accepted: 04/29/2024] [Indexed: 06/01/2024] Open
Abstract
Most reported porous materials are either extended networks or monomeric discrete cavities; indeed, porous structures of intermediate size have scarcely been explored. Herein, we present the stepwise linkage of discrete porous metal-organic cages or polyhedra (MOPs) into oligomeric structures with a finite number of MOP units. The synthesis of these new oligomeric porous molecules entails the preparation of 1-connected (1-c) MOPs with only one available azide reactive site on their surface. The azide-terminated 1-c MOP is linked through copper(i)-catalysed azide-alkyne cycloaddition click chemistry with additional alkyne-terminated 1-c MOPs, 4-c clusters, or 24-c MOPs to yield three classes of giant oligomeric molecules: dimeric, tetrameric, or satellite-like, respectively. Importantly, all the giant molecules that we synthesised are soluble in water and permanently porous in the solid state.
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Affiliation(s)
- Alba Cortés-Martínez
- Catalan Institute of Nanoscience and Nanotechnology (ICN2), CSIC and The Barcelona Institute of Science and Technology Campus UAB, Bellaterra 08193 Barcelona Spain
- Departament de Química, Facultat de Ciències, Universitat Autònoma de Barcelona (UAB) Cerdanyola del Vallès 08193 Barcelona Spain
| | - Cornelia von Baeckmann
- Catalan Institute of Nanoscience and Nanotechnology (ICN2), CSIC and The Barcelona Institute of Science and Technology Campus UAB, Bellaterra 08193 Barcelona Spain
- Departament de Química, Facultat de Ciències, Universitat Autònoma de Barcelona (UAB) Cerdanyola del Vallès 08193 Barcelona Spain
| | - Laura Hernández-López
- Catalan Institute of Nanoscience and Nanotechnology (ICN2), CSIC and The Barcelona Institute of Science and Technology Campus UAB, Bellaterra 08193 Barcelona Spain
- Departament de Química, Facultat de Ciències, Universitat Autònoma de Barcelona (UAB) Cerdanyola del Vallès 08193 Barcelona Spain
| | - Arnau Carné-Sánchez
- Catalan Institute of Nanoscience and Nanotechnology (ICN2), CSIC and The Barcelona Institute of Science and Technology Campus UAB, Bellaterra 08193 Barcelona Spain
- Departament de Química, Facultat de Ciències, Universitat Autònoma de Barcelona (UAB) Cerdanyola del Vallès 08193 Barcelona Spain
| | - Daniel Maspoch
- Catalan Institute of Nanoscience and Nanotechnology (ICN2), CSIC and The Barcelona Institute of Science and Technology Campus UAB, Bellaterra 08193 Barcelona Spain
- Departament de Química, Facultat de Ciències, Universitat Autònoma de Barcelona (UAB) Cerdanyola del Vallès 08193 Barcelona Spain
- ICREA Pg. Lluís Companys 23 08010 Barcelona Spain
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5
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Shan WL, Hou HH, Si N, Wang CX, Yuan G, Gao X, Jin GX. Selective Construction and Structural Transformation of Homogeneous Linear Metalla[4]catenane and Metalla[2]catenane Assemblies. Angew Chem Int Ed Engl 2024; 63:e202402198. [PMID: 38319045 DOI: 10.1002/anie.202402198] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2024] [Revised: 02/02/2024] [Accepted: 02/04/2024] [Indexed: 02/07/2024]
Abstract
Although the synthesis of mechanically interlocked molecules has been extensively researched, selectively constructing homogeneous linear [4]catenanes remains a formidable challenge. Here, we selectively constructed a homogeneous linear metalla[4]catenane in a one-step process through the coordination-driven self-assembly of a bidentate benzothiadiazole derivative ligand and a binuclear half-sandwich rhodium precursor. The formation of metalla[4]catenanes was facilitated by cooperative interactions between strong sandwich-type π-π stacking and non-classical hydrogen bonds between the components. Moreover, by modulating the aromatic substituents on the binuclear precursor, two homogeneous metalla[2]catenanes were obtained. The molecular structures of these metallacatenanes were unambiguously characterized by single-crystal X-ray diffraction analysis. Additionally, reversible structural transformation between metal-catenanes and the corresponding metallarectangles could be achieved by altering their concentration, as confirmed by mass spectrometry and NMR spectroscopy studies.
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Affiliation(s)
- Wei-Long Shan
- School of Chemistry and Chemical Engineering, Anhui University of Technology, Maanshan, 243002, P. R. China
- State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, 2005 Songhu Road, Shanghai, 200433, P. R. China
| | - Huan-Huan Hou
- School of Chemistry and Chemical Engineering, Anhui University of Technology, Maanshan, 243002, P. R. China
| | - Nian Si
- School of Chemistry and Chemical Engineering, Anhui University of Technology, Maanshan, 243002, P. R. China
| | - Cai-Xia Wang
- School of Chemistry and Chemical Engineering, Anhui University of Technology, Maanshan, 243002, P. R. China
| | - Guozan Yuan
- School of Chemistry and Chemical Engineering, Anhui University of Technology, Maanshan, 243002, P. R. China
| | - Xiang Gao
- State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, 2005 Songhu Road, Shanghai, 200433, P. R. China
| | - Guo-Xin Jin
- State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Department of Chemistry, Fudan University, 2005 Songhu Road, Shanghai, 200433, P. R. China
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6
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Mohan M, Pham DJ, Fluck A, Chapuis S, Chaumont A, Kauffmann B, Barloy L, Mobian P. A Chiral [2+3] Covalent Organic Cage Based on 1,1'-Bi-2-naphthol (BINOL) Units. Chemistry 2024; 30:e202400458. [PMID: 38427204 DOI: 10.1002/chem.202400458] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2024] [Revised: 02/29/2024] [Accepted: 03/01/2024] [Indexed: 03/02/2024]
Abstract
A [2+3] chiral covalent organic cage is produced through a dynamic covalent chemistry approach by mixing two readily available building units, viz. an enantiopure 3,3'-diformyl 2,2'-BINOL compound (A) with a triamino spacer (B). The two enantiomeric (R,R,R) and (S,S,S) forms of the cage C are formed nearly quantitatively thanks to the reversibility of the imine linkage. The X-ray diffraction analysis of cage (S,S,S)-C highlights that the six OH functions of the BINOL fragments are positioned inside the cage cavity. Upon reduction of the imine bonds of cage C, the amine cage D is obtained. The ability of the cage D to host the 1-phenylethylammonium cation (EH+) as a guest is evaluated through UV, CD and DOSY NMR studies. A higher binding constant for (R)-EH+ cation (Ka=1.7 106±10 % M-1) related to (S)-EH+ (Ka=0.9 106±10 % M-1) is determined in the presence of the (R,R,R)-D cage. This enantiopreference is in close agreement with molecular dynamics simulation.
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Affiliation(s)
- Midhun Mohan
- Laboratoire de Synthèse et Fonctions des Architectures Moléculaire (SFAM), UMR 7140 (CMC), Université de Strasbourg, 4, rue Blaise Pascal, CS 90032, 67081, Strasbourg Cedex, France
| | - David-Jérôme Pham
- Laboratoire de Synthèse et Fonctions des Architectures Moléculaire (SFAM), UMR 7140 (CMC), Université de Strasbourg, 4, rue Blaise Pascal, CS 90032, 67081, Strasbourg Cedex, France
| | - Audrey Fluck
- Laboratoire de Synthèse et Fonctions des Architectures Moléculaire (SFAM), UMR 7140 (CMC), Université de Strasbourg, 4, rue Blaise Pascal, CS 90032, 67081, Strasbourg Cedex, France
| | - Simon Chapuis
- Laboratoire de Modélisation et Simulations Moléculaires, UMR 7140 (CMC), Université de Strasbourg, 4, rue Blaise Pascal, CS 90032, 67081, Strasbourg Cedex, France
| | - Alain Chaumont
- Laboratoire de Modélisation et Simulations Moléculaires, UMR 7140 (CMC), Université de Strasbourg, 4, rue Blaise Pascal, CS 90032, 67081, Strasbourg Cedex, France
| | - Brice Kauffmann
- Univ. Bordeaux, CNRS, INSERM, IECB, US1, UAR 3033, F-33600, Pessac, France
| | - Laurent Barloy
- Laboratoire de Synthèse et Fonctions des Architectures Moléculaire (SFAM), UMR 7140 (CMC), Université de Strasbourg, 4, rue Blaise Pascal, CS 90032, 67081, Strasbourg Cedex, France
| | - Pierre Mobian
- Laboratoire de Synthèse et Fonctions des Architectures Moléculaire (SFAM), UMR 7140 (CMC), Université de Strasbourg, 4, rue Blaise Pascal, CS 90032, 67081, Strasbourg Cedex, France
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7
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Liang L, Su P, Wang Y, Li B, Lu S, Ma H, Chen Y, Zhao W, Li X, Yang XJ, Wu B. Peripheral Control of the Assembly and Chirality of Anion-Based Octanuclear Cubes by Cation-π Networks. J Am Chem Soc 2024; 146:10908-10916. [PMID: 38579155 DOI: 10.1021/jacs.4c01747] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/07/2024]
Abstract
Self-assembly of sophisticated polyhedral cages has drawn much attention because of their elaborate structures and potential applications. Herein, we report the anion-coordination-driven assembly of the first A8L12 (A = anion, L = ligand) octanuclear cubic structures from phosphate anion and p-xylylene-spaced bis-bis(urea) ligands via peripheral templating of countercations (TEA+ or TPA+). By attaching terminal aryl rings (phenyl or naphthyl) to the ligand through a flexible (methylene) linker, these aryls actively participate in the formation of plenty of "aromatic pockets" for guest cation binding. As a result, multiple peripheral guests (up to 22) of suitable size are bound on the faces and vertices of the cube, forming a network of cation-π interactions to stabilize the cube structure. More interestingly, when chiral ligands were used, either diastereomers of mixed Λ- and Δ-configurations (with TEA+ countercation) for the phosphate coordination centers or enantiopure cubes (with TPA+) were formed. Thus, the assembly and chirality of the cube can be modulated by remote terminal groups and peripheral templating tetraalkylammonium cations.
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Affiliation(s)
- Lin Liang
- Key Laboratory of Medicinal Molecule Science and Pharmaceutics Engineering, Ministry of Industry and Information Technology, School of Chemistry and Chemical Engineering, Beijing Institute of Technology, Beijing 102488, China
| | - Pingru Su
- College of Chemistry and Environmental Engineering, Shenzhen University, Shenzhen 518055, China
| | - Yue Wang
- College of Chemistry and Materials Science, Northwest University, Xi'an 710069, China
| | - Boyang Li
- College of Chemistry and Materials Science, Northwest University, Xi'an 710069, China
| | - Shuai Lu
- College of Chemistry and Environmental Engineering, Shenzhen University, Shenzhen 518055, China
| | - Hongwei Ma
- Analysis & Testing Center, Beijing Institute of Technology, Beijing 102488, China
| | - Yiyang Chen
- Key Laboratory of Medicinal Molecule Science and Pharmaceutics Engineering, Ministry of Industry and Information Technology, School of Chemistry and Chemical Engineering, Beijing Institute of Technology, Beijing 102488, China
| | - Wei Zhao
- Key Laboratory of Medicinal Molecule Science and Pharmaceutics Engineering, Ministry of Industry and Information Technology, School of Chemistry and Chemical Engineering, Beijing Institute of Technology, Beijing 102488, China
| | - Xiaopeng Li
- College of Chemistry and Environmental Engineering, Shenzhen University, Shenzhen 518055, China
| | - Xiao-Juan Yang
- Key Laboratory of Medicinal Molecule Science and Pharmaceutics Engineering, Ministry of Industry and Information Technology, School of Chemistry and Chemical Engineering, Beijing Institute of Technology, Beijing 102488, China
| | - Biao Wu
- Key Laboratory of Medicinal Molecule Science and Pharmaceutics Engineering, Ministry of Industry and Information Technology, School of Chemistry and Chemical Engineering, Beijing Institute of Technology, Beijing 102488, China
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8
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Séjourné S, Labrunie A, Dalinot C, Canevet D, Guechaichia R, Bou Zeid J, Benchohra A, Cauchy T, Brosseau A, Allain M, Chamignon C, Viger-Gravel J, Pintacuda G, Carré V, Aubriet F, Vanthuyne N, Sallé M, Goeb S. Chiral Truxene-Based Self-Assembled Cages: Triple Interlocking and Supramolecular Chirogenesis. Angew Chem Int Ed Engl 2024; 63:e202400961. [PMID: 38284742 DOI: 10.1002/anie.202400961] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2024] [Revised: 01/27/2024] [Accepted: 01/29/2024] [Indexed: 01/30/2024]
Abstract
Incorporating chiral elements in host-guest systems currently attracts much attention because of the major impact such structures may have in a wide range of applications, from pharmaceuticals to materials science and beyond. Moreover, the development of multi-responsive and -functional systems is highly desirable since they offer numerous benefits. In this context, we describe herein the construction of a metal-driven self-assembled cage that associates a chiral truxene-based ligand and a bis-ruthenium complex. The maximum separation between both facing chiral units in the assembly is fixed by the intermetallic distance within the lateral bis-ruthenium complex (8.4 Å). The resulting chiral cavity was shown to encapsulate polyaromatic guest molecules, but also to afford a chiral triply interlocked [2]catenane structure. The formation of the latter occurs at high concentration, while its disassembly could be achieved by the addition of a planar achiral molecule. Interestingly the planar achiral molecule exhibits induced circular dichroism signature when trapped within the chiral cavity, thus demonstrating the ability of the cage to induce supramolecular chirogenesis.
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Affiliation(s)
- Simon Séjourné
- Univ Angers, CNRS, MOLTECH-ANJOU, F-49000, Angers, France
| | | | | | - David Canevet
- Univ Angers, CNRS, MOLTECH-ANJOU, F-49000, Angers, France
| | | | | | | | - Thomas Cauchy
- Univ Angers, CNRS, MOLTECH-ANJOU, F-49000, Angers, France
| | | | - Magali Allain
- Univ Angers, CNRS, MOLTECH-ANJOU, F-49000, Angers, France
| | - Cécile Chamignon
- Centre de RMN à Très Hauts Champs, Université de Lyon (UMR 5082 CNRS/Ecole Normale Supérieure/Université Claude Bernard Lyon 1), 69100, Villeurbanne, France
| | - Jasmine Viger-Gravel
- Centre de RMN à Très Hauts Champs, Université de Lyon (UMR 5082 CNRS/Ecole Normale Supérieure/Université Claude Bernard Lyon 1), 69100, Villeurbanne, France
| | - Guido Pintacuda
- Centre de RMN à Très Hauts Champs, Université de Lyon (UMR 5082 CNRS/Ecole Normale Supérieure/Université Claude Bernard Lyon 1), 69100, Villeurbanne, France
| | - Vincent Carré
- Université de Lorraine, LCP-A2MC, F-57000, Metz, France
| | | | - Nicolas Vanthuyne
- Aix Marseille Université, CNRS, FSCM, Chiropole, F-13397, Marseille, France
| | - Marc Sallé
- Univ Angers, CNRS, MOLTECH-ANJOU, F-49000, Angers, France
| | - Sébastien Goeb
- Univ Angers, CNRS, MOLTECH-ANJOU, F-49000, Angers, France
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9
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Wu G, Zhuang SY, Xing J, Lin Q, Li ZT, Zhang DW. Modular Strategy for Constructing para-Cage[ n]arenes, meta-Cage[ n]arenes, and meta-Bimacrocyclic-Arenes. Org Lett 2024; 26:2007-2012. [PMID: 38442042 DOI: 10.1021/acs.orglett.4c00033] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/07/2024]
Abstract
Here, we present a versatile modular strategy for crafting novel covalent organic cages (para-cage[n]arenes and meta-cage[n]arenes, n = 3,4) and bimacrocycles (meta-bimacrocyclic-arenes) with stable backbones and modifiable rims. These structures can be synthesized from commercially available aromatic multialdehydes in a three-step process: quantitative bromination, Suzuki-Miyaura reaction (yielding over 60%), and a rapid one-pot Friedel-Crafts reaction with paraformaldehyde. Notably, the cage[n]arenes exhibit a well-defined prismatic shape, and the bimacrocyclic-arenes display both dimeric and monomeric configurations.
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Affiliation(s)
- Gang Wu
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200438, China
| | - Sheng-Yi Zhuang
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200438, China
| | - Jiabin Xing
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200438, China
| | - Qihan Lin
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200438, China
| | - Zhan-Ting Li
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200438, China
| | - Dan-Wei Zhang
- Department of Chemistry, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200438, China
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10
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Song G, Lee S, Jeong KS. Complexation-driven assembly of imine-linked helical receptors showing adaptive folding and temperature-dependent guest selection. Nat Commun 2024; 15:1501. [PMID: 38374171 PMCID: PMC10876968 DOI: 10.1038/s41467-024-45322-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2023] [Accepted: 01/22/2024] [Indexed: 02/21/2024] Open
Abstract
The development of synthetic receptors capable of selectively binding guests with diverse structures and multiple functional groups poses a significant challenge. Here, we present the efficient assembly of foldamer-based receptors for monosaccharides, utilising the principles of complexation-induced equilibrium shifting and adaptive folding. Diimine 4 can be quantitatively assembled from smaller components when D-galactose is added as a guest among monosaccharides we examined. During this assembly, dual complexation-induced equilibrium shifts toward both the formation of diimine 4 and the conversion of D-galactose into α-D-galactofuranose are observed. Diimine 6 is quantitatively assembled in the presence of two different guests, methyl β-D-glucopyranoside and methyl β-D-galactopyranoside, resulting in the formation of two dimeric complexes: (6-MP)2⊃(methyl β-D-glucopyranoside)2 and (6-MM)2⊃(methyl β-D-galactopyranoside∙2H2O)2, respectively. These two complexes exhibit distinct folding structures with domain-swapping cavities depending on the bound guest and temperature. Interestingly, (6-MM)2⊃(methyl β-D-galactopyranoside∙2H2O)2 is exclusively formed at lower temperatures, while (6-MP)2⊃(methyl β-D-glucopyranoside)2 is only formed at higher temperatures.
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Affiliation(s)
- Geunmoo Song
- Department of Chemistry, Yonsei University, Seoul, 03722, South Korea
| | - Seungwon Lee
- Department of Chemistry, Yonsei University, Seoul, 03722, South Korea
| | - Kyu-Sung Jeong
- Department of Chemistry, Yonsei University, Seoul, 03722, South Korea.
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11
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Liu SN, Ren QX, Ding YT, Cao XP, Shi ZF, Chow HF, Kuck D. A Molecular Cage Accessed by Threefold Click Reaction of a C3v-Symmetric Triazido-Functionalized Tribenzotriquinacene. J Org Chem 2024; 89:2127-2137. [PMID: 38270538 DOI: 10.1021/acs.joc.3c01349] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2024]
Abstract
The hitherto unknown hexakis(halomethyl)-functionalized tribenzotriquinacenes (TBTQs) 9 and 10 were synthesized from the key 4b,8b,12b-tribromo-TBTQ derivative 6 by an improved route in 67% overall yield. Extension of the bowl-shaped framework of 9 or 10 by threefold condensation with propargylamine or 2-azidoethylamine afforded the corresponding TBTQ-trialkyne 11 and TBTQ-triazide 12, respectively. While attempts to construct bis-TBTQ cages, including homodimerization of 11 and heterocoupling of 11 with 12, were unsuccessful, triazide 12 was found to undergo threefold [3 + 2]-cycloaddition with 3-ethynylaniline and phloroglucinol tripropargyl ether under click chemistry conditions. The latter reaction enabled facile capping of the TBTQ bowl to give the novel cage compound 5 in 22% yield.
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Affiliation(s)
- Shuai-Nan Liu
- State Key Laboratory of Applied Organic Chemistry and College of Chemistry & Chemical Engineering, Lanzhou University, Lanzhou 730000, P. R. China
| | - Qing-Xia Ren
- State Key Laboratory of Applied Organic Chemistry and College of Chemistry & Chemical Engineering, Lanzhou University, Lanzhou 730000, P. R. China
| | - Yun-Tao Ding
- State Key Laboratory of Applied Organic Chemistry and College of Chemistry & Chemical Engineering, Lanzhou University, Lanzhou 730000, P. R. China
| | - Xiao-Ping Cao
- State Key Laboratory of Applied Organic Chemistry and College of Chemistry & Chemical Engineering, Lanzhou University, Lanzhou 730000, P. R. China
| | - Zi-Fa Shi
- State Key Laboratory of Applied Organic Chemistry and College of Chemistry & Chemical Engineering, Lanzhou University, Lanzhou 730000, P. R. China
| | - Hak-Fun Chow
- Department of Chemistry, The Chinese University of Hong Kong, Shatin, NT 999077, Hong Kong
| | - Dietmar Kuck
- Department of Chemistry and Center for Molecular Materials (CM2), Bielefeld University, 33615 Bielefeld, Germany
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12
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Wang Z, Zhang QP, Guo F, Ma H, Liang ZH, Yi CH, Zhang C, Chen CF. Self-similar chiral organic molecular cages. Nat Commun 2024; 15:670. [PMID: 38253630 PMCID: PMC10803742 DOI: 10.1038/s41467-024-44922-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2023] [Accepted: 01/10/2024] [Indexed: 01/24/2024] Open
Abstract
The endeavor to enhance utility of organic molecular cages involves the evolution of them into higher-level chiral superstructures with self-similar, presenting a meaningful yet challenging. In this work, 2D tri-bladed propeller-shaped triphenylbenzene serves as building blocks to synthesize a racemic 3D tri-bladed propeller-shaped helical molecular cage. This cage, in turn, acts as a building block for a pair of higher-level 3D tri-bladed chiral helical molecular cages, featuring multilayer sandwich structures and displaying elegant characteristics with self-similarity in discrete superstructures at different levels. The evolutionary procession of higher-level cages reveals intramolecular self-shielding effects and exclusive chiral narcissistic self-sorting behaviors. Enantiomers higher-level cages can be interconverted by introducing an excess of corresponding chiral cyclohexanediamine. In the solid state, higher-level cages self-assemble into supramolecular architectures of L-helical or D-helical nanofibers, achieving the scale transformation of chiral characteristics from chiral atoms to microscopic and then to mesoscopic levels.
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Affiliation(s)
- Zhen Wang
- College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, 430074, China.
- National Engineering Laboratory for Advanced Yarn and Fabric Formation and Clean Production, Technology Institute, Wuhan Textile University, Wuhan, Hubei, 430200, China.
| | - Qing-Pu Zhang
- College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, 430074, China
| | - Fei Guo
- National Engineering Laboratory for Advanced Yarn and Fabric Formation and Clean Production, Technology Institute, Wuhan Textile University, Wuhan, Hubei, 430200, China
| | - Hui Ma
- College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, 430074, China
| | - Zi-Hui Liang
- National Engineering Laboratory for Advanced Yarn and Fabric Formation and Clean Production, Technology Institute, Wuhan Textile University, Wuhan, Hubei, 430200, China
| | - Chang-Hai Yi
- National Engineering Laboratory for Advanced Yarn and Fabric Formation and Clean Production, Technology Institute, Wuhan Textile University, Wuhan, Hubei, 430200, China
| | - Chun Zhang
- College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, 430074, China.
| | - Chuan-Feng Chen
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, China.
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13
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Cougnon FBL, Stefankiewicz AR, Ulrich S. Dynamic covalent synthesis. Chem Sci 2024; 15:879-895. [PMID: 38239698 PMCID: PMC10793650 DOI: 10.1039/d3sc05343a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Accepted: 12/10/2023] [Indexed: 01/22/2024] Open
Abstract
Dynamic covalent synthesis aims to precisely control the assembly of simple building blocks linked by reversible covalent bonds to generate a single, structurally complex, product. In recent years, considerable progress in the programmability of dynamic covalent systems has enabled easy access to a broad range of assemblies, including macrocycles, shape-persistent cages, unconventional foldamers and mechanically-interlocked species (catenanes, knots, etc.). The reversibility of the covalent linkages can be either switched off to yield stable, isolable products or activated by specific physico-chemical stimuli, allowing the assemblies to adapt and respond to environmental changes in a controlled manner. This activatable dynamic property makes dynamic covalent assemblies particularly attractive for the design of complex matter, smart chemical systems, out-of-equilibrium systems, and molecular devices.
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Affiliation(s)
- Fabien B L Cougnon
- Department of Chemistry and Nanoscience Centre, University of Jyväskylä Jyväskylä Finland
| | - Artur R Stefankiewicz
- Centre for Advanced Technology and Faculty of Chemistry, Adam Mickiewicz University Poznań Poland
| | - Sébastien Ulrich
- Institut des Biomolécules Max Mousseron (IBMM), Université de Montpellier, CNRS, ENSCM Montpellier France
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14
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Zhang YW, Lu Y, Sun LY, Dutschke PD, Gan MM, Zhang L, Hepp A, Han YF, Hahn FE. Unravelling the Roles of Solvophobic Effects and π⋅⋅⋅π Stacking Interactions in the Formation of [2]Catenanes Featuring Di-(N-Heterocyclic Carbene) Building Blocks. Angew Chem Int Ed Engl 2023; 62:e202312323. [PMID: 37819869 DOI: 10.1002/anie.202312323] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2023] [Revised: 10/11/2023] [Accepted: 10/11/2023] [Indexed: 10/13/2023]
Abstract
A series of [2]catenanes has been prepared from di-NHC building blocks by utilizing solvophobic effects and/or π⋅⋅⋅π stacking interactions. The dinickel naphthobiscarbene complex syn-[1] and the kinked biphenyl-bridged bipyridyl ligand L2 yield the [2]catenane [2-IL](OTf)4 by self-assembly. Solvophobic effects are pivotal for the formation of the interlocked species. Substitution of the biphenyl-linker in L2 for a pyromellitic diimide group gave ligand L3 , which yielded in combination with syn-[1] the [2]catenane [3-IL](OTf)4 . This assembly exhibits enhanced stability in diluted solution, aided by additional π⋅⋅⋅π stacking interactions. The π⋅⋅⋅π stacking was augmented by the introduction of a pyrene bridge between two NHC donors in ligand L4 . Di-NHC precursor H2 -L4 (PF6 )2 reacts with Ag2 O to give the [Ag2 L4 2 ]2 [2]catenane [4-IL](PF6 )4 , which shows strong π⋅⋅⋅π stacking interactions between the pyrene groups. This assembly was readily converted into the [Au2 L4 2 ]2 gold species [5-IL](PF6 )4 , which exhibits exceptional stability based on the strong π⋅⋅⋅π stacking interactions and the enhanced stability of the Au-CNHC bonds.
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Affiliation(s)
- Ya-Wen Zhang
- Xi'an Key Laboratory of Functional Supramolecular Structure and Materials, College of Chemistry and Material Science, Northwest University, Xi'an, 710127, P. R. China
| | - Ye Lu
- Institut für Anorganische und Analytische Chemie, Westfälische Wilhelms-Universität Münster, Corrensstrasse 30, 48149, Münster, Germany
- College of Chemistry and Materials Science, Shanghai Normal University, 100 Guilin Road, Shanghai, China, 200234
| | - Li-Ying Sun
- Xi'an Key Laboratory of Functional Supramolecular Structure and Materials, College of Chemistry and Material Science, Northwest University, Xi'an, 710127, P. R. China
| | - Patrick D Dutschke
- Institut für Anorganische und Analytische Chemie, Westfälische Wilhelms-Universität Münster, Corrensstrasse 30, 48149, Münster, Germany
| | - Ming-Ming Gan
- Xi'an Key Laboratory of Functional Supramolecular Structure and Materials, College of Chemistry and Material Science, Northwest University, Xi'an, 710127, P. R. China
| | - Le Zhang
- Xi'an Key Laboratory of Functional Supramolecular Structure and Materials, College of Chemistry and Material Science, Northwest University, Xi'an, 710127, P. R. China
| | - Alexander Hepp
- Institut für Anorganische und Analytische Chemie, Westfälische Wilhelms-Universität Münster, Corrensstrasse 30, 48149, Münster, Germany
| | - Ying-Feng Han
- Xi'an Key Laboratory of Functional Supramolecular Structure and Materials, College of Chemistry and Material Science, Northwest University, Xi'an, 710127, P. R. China
| | - F Ekkehardt Hahn
- Institut für Anorganische und Analytische Chemie, Westfälische Wilhelms-Universität Münster, Corrensstrasse 30, 48149, Münster, Germany
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15
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Holsten M, Elbert SM, Rominger F, Zhang WS, Schröder RR, Mastalerz M. Single Crystals of Insoluble Porous Salicylimine Cages. Chemistry 2023; 29:e202302116. [PMID: 37577877 DOI: 10.1002/chem.202302116] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2023] [Revised: 07/28/2023] [Accepted: 08/11/2023] [Indexed: 08/15/2023]
Abstract
Porous organic cages (POCs) are meanwhile an established class of porous materials. Most of them are soluble to a certain extend and thus processable in or from solution. However, a few of larger salicylimine cages were reported to be insoluble in any organic solvents and thus characterized as amorphous materials. These cages were now synthesized as single-crystalline materials to get insight into packing motifs and preferred intermolecular interactions. Furthermore, the pairs of crystalline and amorphous materials for each cage allowed to compare their gas-sorption properties in both morphological states.
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Affiliation(s)
- Mattes Holsten
- Organisch-Chemisches Institut, Ruprecht-Karls-Universität Heidelberg, Im Neuenheimer Feld 270, 69120, Heidelberg, Germany
| | - Sven M Elbert
- Organisch-Chemisches Institut, Ruprecht-Karls-Universität Heidelberg, Im Neuenheimer Feld 270, 69120, Heidelberg, Germany
| | - Frank Rominger
- Organisch-Chemisches Institut, Ruprecht-Karls-Universität Heidelberg, Im Neuenheimer Feld 270, 69120, Heidelberg, Germany
| | - Wen-Shan Zhang
- Bioquant, Ruprecht-Karls-Universität Heidelberg, Im Neuenheimer Feld 267, 69120, Heidelberg, Germany
| | - Rasmus R Schröder
- Bioquant, Ruprecht-Karls-Universität Heidelberg, Im Neuenheimer Feld 267, 69120, Heidelberg, Germany
| | - Michael Mastalerz
- Organisch-Chemisches Institut, Ruprecht-Karls-Universität Heidelberg, Im Neuenheimer Feld 270, 69120, Heidelberg, Germany
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16
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Yu HM, Du MH, Shu J, Deng YH, Xu ZM, Huang ZW, Zhang Z, Chen B, Braunstein P, Lang JP. Self-Assembly of Cluster-Mediated 3D Catenanes with Size-Specific Recognition Behavior. J Am Chem Soc 2023; 145:25103-25108. [PMID: 37938934 DOI: 10.1021/jacs.3c11398] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2023]
Abstract
Although interlocked three-dimensional molecules display unique properties associated with their spatial structures, their synthesis and study of their host-guest properties remain challenging. We report the formation of a novel [2]catenane, [Et4N]@[(Tp*WS3Cu3Cl)2(cis-bpype)3]2(OTf)5 ([Et4N][1](OTf)5), by self-assembly of the cluster node [Tp*WS3Cu3Cl]+ and the organic linker (Z)-1,2-diphenyl-1,2-bis(4-(pyridin-4-yl)phenyl)ethene (cis-bpype). Single-crystal X-ray and NMR analyses established that [1]4+ is formed by the interpenetration of two cluster-organic cages. Unique cation-in-cation host-guest complexes were observed with this catenane. The crystalline, empty catenane was formed by taking advantage of the electrostatic repulsion-induced weak binding of the host. Encapsulation experiments also reveal that the empty catenane can adaptively encapsulate cations such as [Et4N]+ and [Pr4N]+ in the cross cavity but is unable to encapsulate [Bu4N]+ and [Me4N]+, although the size of the latter is compatible with that of the cavity. Theoretical calculations and volume analysis allow to unravel the ingenious role of catenane structures and the interplay between electrostatic repulsion and attractive noncovalent interactions for size-specific recognition behavior in host-guest systems involving species with similar electric charges.
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Affiliation(s)
- Hui-Min Yu
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou 215123, Jiangsu, China
- State Key Laboratory of Organometallic Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 200032, China
| | - Ming-Hao Du
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou 215123, Jiangsu, China
| | - Jie Shu
- Analysis and Testing Center, Suzhou 215123, Jiangsu, China
| | - Yun-Hu Deng
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou 215123, Jiangsu, China
| | - Ze-Ming Xu
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou 215123, Jiangsu, China
| | - Zhi-Wen Huang
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou 215123, Jiangsu, China
| | - Zheng Zhang
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou 215123, Jiangsu, China
| | - Bingbing Chen
- Department of Energy Science and Engineering, Nanjing Tech University, Nanjing 210009, Jiangsu, China
| | - Pierre Braunstein
- Institut de Chimie (UMR 7177 CNRS), Université de Strasbourg, 67081 Strasbourg, France
| | - Jian-Ping Lang
- College of Chemistry, Chemical Engineering and Materials Science, Soochow University, Suzhou 215123, Jiangsu, China
- State Key Laboratory of Organometallic Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 200032, China
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17
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van Dam A, van Schendel R, Gangarapu S, Zuilhof H, Smulders MMJ. DFT Study of Imine-Exchange Reactions in Iron(II)-Coordinated Pincers. Chemistry 2023; 29:e202301795. [PMID: 37560922 DOI: 10.1002/chem.202301795] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2023] [Revised: 08/08/2023] [Accepted: 08/10/2023] [Indexed: 08/11/2023]
Abstract
The imine bond is among the most applied motifs in dynamic covalent chemistry. Although its uses are varied and often involve coordination to a transition metal for stability, mechanistic studies on imine exchange reactions so far have not included metal coordination. Herein, we investigated the condensation and transimination reactions of an Fe2+ -coordinated diimine pyridine pincer, employing wB97XD/6-311G(2d,2p) DFT calculations in acetonitrile. We first experimentally confirmed that Fe2+ is strongly coordinated by these pincers, and is thus a justified model ion. When considering a four-membered ring-shaped transition state for proton transfers, the required activation energies for condensation and transimination reaction exceeded the values expected for reactions known to be spontaneous at room temperature. The nature of the incoming and exiting amines and the substituents on the para-position of the pincer had no effect on this. Replacing Fe2+ with Zn2+ or removing it altogether did not reduce it either. However, the addition of two ethylamine molecules lowered the energy barriers to be compatible with experiment (19.4 and 23.2 kcal/mol for condensation and transimination, respectively). Lastly, the energy barrier of condensation of a non-coordinated pincer was significantly higher than found for Fe2+ -coordinating pincers, underlining the catalyzing effect of metal coordination on imine exchange reactions.
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Affiliation(s)
- Annemieke van Dam
- Laboratory of Organic Chemistry, Wageningen University, Stippeneng 4, 6708WE, Wageningen, The Netherlands
| | - Robin van Schendel
- Laboratory of Organic Chemistry, Wageningen University, Stippeneng 4, 6708WE, Wageningen, The Netherlands
| | - Satesh Gangarapu
- Laboratory of Organic Chemistry, Wageningen University, Stippeneng 4, 6708WE, Wageningen, The Netherlands
| | - Han Zuilhof
- Laboratory of Organic Chemistry, Wageningen University, Stippeneng 4, 6708WE, Wageningen, The Netherlands
- School of Pharmaceutical Sciences and Technology, Tianjin University, 92 Weijin Road, Tianjin, 300072, P.R. China
| | - Maarten M J Smulders
- Laboratory of Organic Chemistry, Wageningen University, Stippeneng 4, 6708WE, Wageningen, The Netherlands
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18
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Chen Q, Li Z, Lei Y, Chen Y, Tang H, Wu G, Sun B, Wei Y, Jiao T, Zhang S, Huang F, Wang L, Li H. The sharp structural switch of covalent cages mediated by subtle variation of directing groups. Nat Commun 2023; 14:4627. [PMID: 37532710 PMCID: PMC10397198 DOI: 10.1038/s41467-023-40255-4] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2023] [Accepted: 07/19/2023] [Indexed: 08/04/2023] Open
Abstract
It is considered a more formidable task to precisely control the self-assembled products containing purely covalent components, due to a lack of intrinsic templates such as transition metals to suppress entropy loss during self-assembly. Here, we attempt to tackle this challenge by using directing groups. That is, the self-assembly products of condensing a 1:2 mixture of a tetraformyl and a biamine can be precisely controlled by slightly changing the substituent groups in the aldehyde precursor. This is because different directing groups provide hydrogen bonds with different modes to the adjacent imine units, so that the building blocks are endowed with totally different conformations. Each conformation favors the formation of a specific product that is thus produced selectively, including chiral and achiral cages. These results of using a specific directing group to favor a target product pave the way for accomplishing atom economy in synthesizing purely covalent molecules without relying on toxic transition metal templates.
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Affiliation(s)
- Qiong Chen
- Department of Chemistry, Zhejiang University, Hangzhou, 310058, PR China
| | - Zhaoyong Li
- Department of Chemistry, Zhejiang University, Hangzhou, 310058, PR China
- Key Laboratory of Excited-State Materials of Zhejiang Province, Zhejiang University, Hangzhou, 310058, PR China
| | - Ye Lei
- Department of Chemistry, Zhejiang University, Hangzhou, 310058, PR China
| | - Yixin Chen
- Department of Chemistry, Zhejiang University, Hangzhou, 310058, PR China
| | - Hua Tang
- Department of Chemistry, Zhejiang University, Hangzhou, 310058, PR China
| | - Guangcheng Wu
- Department of Chemistry, Zhejiang University, Hangzhou, 310058, PR China
| | - Bin Sun
- ZJU-Hangzhou Global Scientific and Technological Innovation Center, Zhejiang University, Hangzhou, 311215, PR China
| | - Yuxi Wei
- Department of Chemistry, Zhejiang University, Hangzhou, 310058, PR China
| | - Tianyu Jiao
- Department of Chemistry, Zhejiang University, Hangzhou, 310058, PR China
| | - Songna Zhang
- ZJU-Hangzhou Global Scientific and Technological Innovation Center, Zhejiang University, Hangzhou, 311215, PR China.
| | - Feihe Huang
- Department of Chemistry, Zhejiang University, Hangzhou, 310058, PR China.
- ZJU-Hangzhou Global Scientific and Technological Innovation Center, Zhejiang University, Hangzhou, 311215, PR China.
| | - Linjun Wang
- Department of Chemistry, Zhejiang University, Hangzhou, 310058, PR China.
- Key Laboratory of Excited-State Materials of Zhejiang Province, Zhejiang University, Hangzhou, 310058, PR China.
| | - Hao Li
- Department of Chemistry, Zhejiang University, Hangzhou, 310058, PR China.
- ZJU-Hangzhou Global Scientific and Technological Innovation Center, Zhejiang University, Hangzhou, 311215, PR China.
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19
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Abstract
Porous organic cages (POCs) are a relatively new class of low-density crystalline materials that have emerged as a versatile platform for investigating molecular recognition, gas storage and separation, and proton conduction, with potential applications in the fields of porous liquids, highly permeable membranes, heterogeneous catalysis, and microreactors. In common with highly extended porous structures, such as metal-organic frameworks (MOFs), covalent organic frameworks (COFs), and porous organic polymers (POPs), POCs possess all of the advantages of highly specific surface areas, porosities, open pore channels, and tunable structures. In addition, they have discrete molecular structures and exhibit good to excellent solubilities in common solvents, enabling their solution dispersibility and processability─properties that are not readily available in the case of the well-established, insoluble, extended porous frameworks. Here, we present a critical review summarizing in detail recent progress and breakthroughs─especially during the past five years─of all the POCs while taking a close look at their strategic design, precise synthesis, including both irreversible bond-forming chemistry and dynamic covalent chemistry, advanced characterization, and diverse applications. We highlight representative POC examples in an attempt to gain some understanding of their structure-function relationships. We also discuss future challenges and opportunities in the design, synthesis, characterization, and application of POCs. We anticipate that this review will be useful to researchers working in this field when it comes to designing and developing new POCs with desired functions.
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Affiliation(s)
- Xinchun Yang
- Faculty of Materials Science and Energy Engineering/Institute of Technology for Carbon Neutrality, Shenzhen Institute of Advanced Technology (SIAT), Chinese Academy of Sciences (CAS), Shenzhen 518055, China
- Shenzhen Key Laboratory of Energy Materials for Carbon Neutrality, Shenzhen Institute of Advanced Technology (SIAT), Chinese Academy of Sciences (CAS), Shenzhen 518055, China
| | - Zakir Ullah
- Convergence Research Center for Insect Vectors, Division of Life Sciences, College of Life Sciences and Bioengineering, Incheon National University, Incheon 22012, South Korea
| | - J Fraser Stoddart
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60208, United States
- School of Chemistry, University of New South Wales, Sydney, New South Wales 2052, Australia
- Stoddart Institute of Molecular Science, Department of Chemistry, Zhejiang University, Hangzhou 310027, China
- ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou 311215, China
| | - Cafer T Yavuz
- Oxide & Organic Nanomaterials for Energy & Environment Laboratory, Physical Science & Engineering (PSE), King Abdullah University of Science and Technology (KAUST), 4700 KAUST, Thuwal 23955, Saudi Arabia
- Advanced Membranes & Porous Materials Center, PSE, KAUST, 4700 KAUST, Thuwal 23955, Saudi Arabia
- KAUST Catalysis Center, PSE, KAUST, 4700 KAUST, Thuwal 23955, Saudi Arabia
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20
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Wagner P, Rominger F, Gross JH, Mastalerz M. Solvent-Controlled Quadruple Catenation of Giant Chiral [8+12] Salicylimine Cubes Driven by Weak Hydrogen Bonding. Angew Chem Int Ed Engl 2023; 62:e202217251. [PMID: 36695113 DOI: 10.1002/anie.202217251] [Citation(s) in RCA: 9] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2022] [Revised: 01/19/2023] [Accepted: 01/24/2023] [Indexed: 01/26/2023]
Abstract
Mechanically interlocked structures are fascinating synthetic targets and the topological complexity achieved through catenation offers numerous possibilities for the construction of new molecules with exciting properties. In the structural space of catenated organic cage molecules, only few examples have been realized so far, and control over the catenation process in solution is still barely achieved. Herein, we describe the formation of a quadruply interlocked catenane of giant chiral [8+12] salicylimine cubes. The formation could be controlled by the choice of solvent used in the reaction. The interlocked structure was unambiguously characterized by single crystal X-ray diffraction and weak hydrogen bonding was identified as a central driving force for the catenation. Furthermore, scrambling experiments using partially deuterated cages were performed, revealing that the catenane formation occurs through mechanical interlocking of preformed single cages.
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Affiliation(s)
- Philippe Wagner
- Organisch-Chemisches Institut, Ruprecht-Karls-Universität Heidelberg, Im Neuenheimer Feld 270, 69120, Heidelberg, Germany
| | - Frank Rominger
- Organisch-Chemisches Institut, Ruprecht-Karls-Universität Heidelberg, Im Neuenheimer Feld 270, 69120, Heidelberg, Germany
| | - Jürgen H Gross
- Organisch-Chemisches Institut, Ruprecht-Karls-Universität Heidelberg, Im Neuenheimer Feld 270, 69120, Heidelberg, Germany
| | - Michael Mastalerz
- Organisch-Chemisches Institut, Ruprecht-Karls-Universität Heidelberg, Im Neuenheimer Feld 270, 69120, Heidelberg, Germany
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