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Namekata N, Kobayashi N, Nomura K, Sako T, Takata N, Inoue S. Quantum optical tomography based on time-resolved and mode-selective single-photon detection by femtosecond up-conversion. Sci Rep 2023; 13:21080. [PMID: 38030670 PMCID: PMC10687223 DOI: 10.1038/s41598-023-48270-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2023] [Accepted: 11/24/2023] [Indexed: 12/01/2023] Open
Abstract
We developed an optical time-of-flight measurement system using a time-resolved and mode-selective up-conversion single-photon detector for acquiring tomographic images of a mouse brain. The probe and pump pulses were spectrally carved from a 100-femtosecond mode-locked fiber laser at 1556 nm using 4f systems, so that their center wavelengths were situated at either side of the phase matching band separated by 30 nm. We demonstrated a sensitivity of 111 dB which is comparable to that of shot-noise-limited optical coherence tomography and an axial resolution of 57 μm (a refractive index of 1.37) with 380 femtosecond probe and pump pulses whose average powers were 1.5 mW and 30 μW, respectively. The proposed technique will open a new way of non-contact and non-invasive three-dimensional structural imaging of biological specimens with ultraweak optical irradiation.
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Affiliation(s)
- Naoto Namekata
- Institute of Quantum Science, Nihon University, 1-8-14 Kanda-Surugadai, Chiyoda-Ku, Tokyo, 101-8308, Japan.
| | - Nobuaki Kobayashi
- Department of Precision Machinery Engineering, College of Science and Technology, Nihon University, 7-24-1 Narashinodai, Funabashi, Chiba, 274-8501, Japan
| | - Kenya Nomura
- Laboratory of Physics, College of Science and Technology, Nihon University, 7-24-1 Narashinodai, Funabashi, Chiba, 274-8501, Japan
| | - Tokuei Sako
- Laboratory of Physics, College of Science and Technology, Nihon University, 7-24-1 Narashinodai, Funabashi, Chiba, 274-8501, Japan
| | - Norio Takata
- Division of Brain Science, Institute for Advanced Medical Research, Keio University School of Medicine, 35 Shinanomachi, Shinjyuku, Tokyo, 160-8582, Japan
| | - Shuichiro Inoue
- Institute of Quantum Science, Nihon University, 1-8-14 Kanda-Surugadai, Chiyoda-Ku, Tokyo, 101-8308, Japan
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Kufcsák A, Bagnaninchi P, Erdogan AT, Henderson RK, Krstajić N. Time-resolved spectral-domain optical coherence tomography with CMOS SPAD sensors. OPTICS EXPRESS 2021; 29:18720-18733. [PMID: 34154122 DOI: 10.1364/oe.422648] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/26/2021] [Accepted: 05/14/2021] [Indexed: 06/13/2023]
Abstract
We present a first spectral-domain optical coherence tomography (SD-OCT) system deploying a complementary metal-oxide-semiconductor (CMOS) single-photon avalanche diode (SPAD) based, time-resolved line sensor. The sensor with 1024 pixels achieves a sensitivity of 87 dB at an A-scan rate of 1 kHz using a supercontinuum laser source with a repetition rate of 20 MHz, 38 nm bandwidth, and 2 mW power at 850 nm centre wavelength. In the time-resolved mode of the sensor, the system combines low-coherence interferometry (LCI) and massively parallel time-resolved single-photon counting to control the detection of interference spectra on the single-photon level based on the time-of-arrival of photons. For proof of concept demonstration of the combined detection scheme we show the acquisition of time-resolved interference spectra and the reconstruction of OCT images from selected time bins. Then, we exemplify the temporal discrimination feature with 50 ps time resolution and 249 ps timing uncertainty by removing unwanted reflections from along the optical path at a 30 mm distance from the sample. The current limitations of the proposed technique in terms of sensor parameters are analysed and potential improvements are identified for advanced photonic applications.
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Bianconi S, Mohseni H. Recent advances in infrared imagers: toward thermodynamic and quantum limits of photon sensitivity. REPORTS ON PROGRESS IN PHYSICS. PHYSICAL SOCIETY (GREAT BRITAIN) 2020; 83:044101. [PMID: 32018242 PMCID: PMC7282310 DOI: 10.1088/1361-6633/ab72e5] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
Infrared detection and imaging are key enabling technologies for a vast number of applications, ranging from communication, to medicine and astronomy, and have recently attracted interest for their potential application in optical interconnects and quantum computing. Nonetheless, infrared detection still constitutes the performance bottleneck for several of these applications, due to a number of unsolved challenges, such as limited quantum efficiency, yield and scalability of the devices, as well as limited sensitivity and low operating temperatures. The current commercially dominating technologies are based on planar semiconducting PIN or avalanche detectors. However, recent developments in semiconductor technology and nano-scale materials have enabled significant technological advancement, demonstrating the potential for groundbreaking achievements in the field. We review the recent progress in the most prominent novel detection technologies, and evaluate their advantages, limitations, and prospects. We further offer a perspective on the main fundamental limits on the detectors sensitivity, and we discuss the technological challenges that need to be addressed for significative advancement of the field. Finally, we present a set of potential system-wide strategies, including nanoscale and low-dimensional detectors, light coupling enhancement strategies, advanced read-out circuitry, neuromorphic and curved image sensors, aimed at improving the overall imagers performance.
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Affiliation(s)
- Simone Bianconi
- Department of Electrical and Computer Engineering, Northwestern University, Evanston, IL 60208, United States of America
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Abstract
Since their serendipitous discovery in nematodes, microRNAs (miRNAs) have emerged as key regulators of biological processes in animals. These small RNAs form complex networks that regulate cell differentiation, development and homeostasis. Deregulation of miRNA function is associated with an increasing number of human diseases, particularly cancer. Recent discoveries have expanded our understanding of the control of miRNA function. Here, we review the mechanisms that modulate miRNA activity, stability and cellular localization through alternative processing and maturation, sequence editing, post-translational modifications of Argonaute proteins, viral factors, transport from the cytoplasm and regulation of miRNA-target interactions. We conclude by discussing intriguing, unresolved research questions.
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Affiliation(s)
- Luca F R Gebert
- Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA, USA
| | - Ian J MacRae
- Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA, USA.
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Bianconi S, Rezaei M, Park MS, Huang W, Tan CL, Mohseni H. Engineering the gain-bandwidth product of phototransistor diodes. APPLIED PHYSICS LETTERS 2019; 115:051104. [PMID: 32127721 PMCID: PMC7043828 DOI: 10.1063/1.5095815] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/13/2019] [Accepted: 07/11/2019] [Indexed: 06/02/2023]
Abstract
In recent years, phototransistors have considerably expanded their field of application, including for instance heterodyne detection and optical interconnects. Unlike in low-light imaging, some of these applications require fast photodetectors that can operate in relatively high light levels. Since the gain and bandwidth of phototransistors are not constant across different optical powers, the devices that have been optimized for operation in low light level cannot effectively be employed in different technological applications. We present an extensive study of the gain and bandwidth of short-wavelength infrared phototransistors as a function of optical power level for three device architectures that we designed and fabricated. The gain of the photodetectors is found to increase with increasing carrier injection. Based on a Shockley-Read-Hall recombination model, we show that this is due to the saturation of recombination centers in the phototransistor base layer. Eventually, at a higher light level, the gain drops, due to the Kirk effect. As a result of these opposing mechanisms, the gain-bandwidth product is peaked at a given power level, which depends on the device design and material parameters, such as doping and defect density. Guided by this physical understanding, we design and demonstrate a phototransistor which is capable of reaching a high gain-bandwidth product for high-speed applications. The proposed design criteria can be employed in conjunction with the engineering of the device size to achieve a wide tunability of the gain and bandwidth, hence paving the way toward fast photodetectors for applications with different light levels.
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Affiliation(s)
- Simone Bianconi
- Bio-Inspired Sensors and Optoelectronics Laboratory, Northwestern University, 2145 Sheridan Rd, Evanston, Illinois 60208, USA
| | - Mohsen Rezaei
- Bio-Inspired Sensors and Optoelectronics Laboratory, Northwestern University, 2145 Sheridan Rd, Evanston, Illinois 60208, USA
| | | | - Wenyuan Huang
- Bio-Inspired Sensors and Optoelectronics Laboratory, Northwestern University, 2145 Sheridan Rd, Evanston, Illinois 60208, USA
| | | | - Hooman Mohseni
- Bio-Inspired Sensors and Optoelectronics Laboratory, Northwestern University, 2145 Sheridan Rd, Evanston, Illinois 60208, USA
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A Novel Mach-Zehnder Interferometer Using Eccentric-Core Fiber Design for Optical Coherence Tomography. SENSORS 2018; 18:s18051540. [PMID: 29757246 PMCID: PMC5981871 DOI: 10.3390/s18051540] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/18/2018] [Revised: 05/09/2018] [Accepted: 05/09/2018] [Indexed: 11/30/2022]
Abstract
A novel Mach-Zehnder interferometer using eccentric-core fiber (ECF) design for optical coherence tomography (OCT) is proposed and demonstrated. Instead of the commercial single-mode fiber (SMF), the ECF is used as one interference arm of the implementation. Because of the offset location of the eccentric core, it is sensitive to directional bending and the optical path difference (OPD) of two interference arms can be adjusted with high precision. The birefringence of ECF is calculated and experimentally measured, which demonstrates the polarization sensitivity of the ECF proposed in the paper is similar to that of SMF. Such a structure can replace the reference optical delay line to form an all-fiber passive device. A mirror is used as a sample for analyzing the ECF bending responses of the system. Besides, four pieces of overlapping glass slides as sample are experimentally measured as well.
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Monroy GL, Won J, Spillman DR, Dsouza R, Boppart SA. Clinical translation of handheld optical coherence tomography: practical considerations and recent advancements. JOURNAL OF BIOMEDICAL OPTICS 2017; 22:1-30. [PMID: 29260539 PMCID: PMC5735247 DOI: 10.1117/1.jbo.22.12.121715] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/06/2017] [Accepted: 12/04/2017] [Indexed: 05/21/2023]
Abstract
Since the inception of optical coherence tomography (OCT), advancements in imaging system design and handheld probes have allowed for numerous advancements in disease diagnostics and characterization of the structural and optical properties of tissue. OCT system developers continue to reduce form factor and cost, while improving imaging performance (speed, resolution, etc.) and flexibility for applicability in a broad range of fields, and nearly every clinical specialty. An extensive array of components to construct customized systems has also become available, with a range of commercial entities that produce high-quality products, from single components to full systems, for clinical and research use. Many advancements in the development of these miniaturized and portable systems can be linked back to a specific challenge in academic research, or a clinical need in medicine or surgery. Handheld OCT systems are discussed and explored for various applications. Handheld systems are discussed in terms of their relative level of portability and form factor, with mention of the supporting technologies and surrounding ecosystem that bolstered their development. Additional insight from our efforts to implement systems in several clinical environments is provided. The trend toward well-designed, efficient, and compact handheld systems paves the way for more widespread adoption of OCT into point-of-care or point-of-procedure applications in both clinical and commercial settings.
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Affiliation(s)
- Guillermo L. Monroy
- Beckman Institute for Advanced Science and Technology, Urbana, Illinois, United States
- University of Illinois at Urbana-Champaign, Department of Bioengineering, Urbana, Illinois, United States
| | - Jungeun Won
- Beckman Institute for Advanced Science and Technology, Urbana, Illinois, United States
- University of Illinois at Urbana-Champaign, Department of Bioengineering, Urbana, Illinois, United States
| | - Darold R. Spillman
- Beckman Institute for Advanced Science and Technology, Urbana, Illinois, United States
| | - Roshan Dsouza
- Beckman Institute for Advanced Science and Technology, Urbana, Illinois, United States
| | - Stephen A. Boppart
- Beckman Institute for Advanced Science and Technology, Urbana, Illinois, United States
- University of Illinois at Urbana-Champaign, Department of Bioengineering, Urbana, Illinois, United States
- University of Illinois at Urbana-Champaign, Department of Electrical and Computer Engineering, Urbana, Illinois, United States
- Carle-Illinois College of Medicine, Urbana, Illinois, United States
- Address all correspondence to: Stephen A. Boppart, E-mail:
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Lan G, Singh M, Larin KV, Twa MD. Common-path phase-sensitive optical coherence tomography provides enhanced phase stability and detection sensitivity for dynamic elastography. BIOMEDICAL OPTICS EXPRESS 2017; 8:5253-5266. [PMID: 29188118 PMCID: PMC5695968 DOI: 10.1364/boe.8.005253] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/11/2017] [Revised: 10/16/2017] [Accepted: 10/23/2017] [Indexed: 05/08/2023]
Abstract
Phase-sensitive optical coherence elastography (PhS-OCE) is an emerging optical technique to quantify soft-tissue biomechanical properties. We implemented a common-path OCT design to enhance displacement sensitivity and optical phase stability for dynamic elastography imaging. The background phase stability was greater in common-path PhS-OCE (0.24 ± 0.07nm) than conventional PhS-OCE (1.60 ± 0.11μm). The coefficient of variation for surface displacement measurements using conventional PhS-OCE averaged 11% versus 2% for common-path PhS-OCE. Young's modulus estimates showed good precision (95% CIs) for tissue phantoms: 24.96 ± 2.18kPa (1% agar), 49.69 ± 4.87kPa (1.5% agar), and 116.08 ± 12.14kPa (2% agar), respectively. Common-path PhS-OCE effectively reduced the amplitude of background dynamic optical phase instability to a sub-nanometer level, which provided a larger dynamic detection range and higher detection sensitivity for surface displacement measurements than conventional PhS-OCE.
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Affiliation(s)
- Gongpu Lan
- School of Optometry, University of Alabama at Birmingham, Birmingham, AL, USA
| | - Manmohan Singh
- Biomedical Engineering, University of Houston, Houston, TX, USA
| | - Kirill V. Larin
- Biomedical Engineering, University of Houston, Houston, TX, USA
- Interdisciplinary Laboratory of Biophotonics, Tomsk State University, Tomsk, Russia
| | - Michael D. Twa
- School of Optometry, University of Alabama at Birmingham, Birmingham, AL, USA
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