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Balbuena MS, Latorre-Estivalis JM, Farina WM. Identification of chemosensory genes in the stingless bee Tetragonisca fiebrigi. G3 (BETHESDA, MD.) 2024; 14:jkae060. [PMID: 38498593 PMCID: PMC11075565 DOI: 10.1093/g3journal/jkae060] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2024] [Revised: 01/15/2024] [Accepted: 03/02/2024] [Indexed: 03/20/2024]
Abstract
Reception of chemical information from the environment is crucial for insects' survival and reproduction. The chemosensory reception mainly occurs by the antennae and mouth parts of the insect, when the stimulus contacts the chemoreceptors located within the sensilla. Chemosensory receptor genes have been well-studied in some social hymenopterans such as ants, honeybees, and wasps. However, although stingless bees are the most representative group of eusocial bees, little is known about their odorant, gustatory, and ionotropic receptor genes. Here, we analyze the transcriptome of the proboscis and antennae of the stingless bee Tetragonisca fiebrigi. We identified and annotated 9 gustatory and 15 ionotropic receptors. Regarding the odorant receptors, we identified 204, and we were able to annotate 161 of them. In addition, we compared the chemosensory receptor genes of T. fiebrigi with those annotated for other species of Hymenoptera. We found that T. fiebrigi showed the largest number of odorant receptors compared with other bees. Genetic expansions were identified in the subfamilies 9-exon, which was also expanded in ants and paper wasps; in G02A, including receptors potentially mediating social behavior; and in GUnC, which has been related to pollen and nectar scent detection. Our study provides the first report of chemosensory receptor genes in T. fiebrigi and represents a resource for future molecular and physiological research in this and other stingless bee species.
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Affiliation(s)
- María Sol Balbuena
- Laboratorio de Insectos Sociales, Instituto de Fisiología, Biología Molecular y Neurociencias (IFIBYNE), Universidad de Buenos Aires—CONICET, CABA C1428EGA, Argentina
- Laboratorio de Insectos Sociales, Departamento de Biodiversidad y Biología Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, CABA C1428EGA, Argentina
| | - Jose M Latorre-Estivalis
- Laboratorio de Insectos Sociales, Instituto de Fisiología, Biología Molecular y Neurociencias (IFIBYNE), Universidad de Buenos Aires—CONICET, CABA C1428EGA, Argentina
- Laboratorio de Insectos Sociales, Departamento de Biodiversidad y Biología Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, CABA C1428EGA, Argentina
| | - Walter M Farina
- Laboratorio de Insectos Sociales, Instituto de Fisiología, Biología Molecular y Neurociencias (IFIBYNE), Universidad de Buenos Aires—CONICET, CABA C1428EGA, Argentina
- Laboratorio de Insectos Sociales, Departamento de Biodiversidad y Biología Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, CABA C1428EGA, Argentina
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2
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Lin MD, Chuang CH, Kao CH, Chen SH, Wang SC, Hsieh PH, Chen GY, Mao CC, Li JY, Jade Lu MY, Lin CY. Decoding the genome of bloodsucking midge Forcipomyia taiwana (Diptera: Ceratopogonidae): Insights into odorant receptor expansion. INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY 2024; 168:104115. [PMID: 38570118 DOI: 10.1016/j.ibmb.2024.104115] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/17/2023] [Revised: 03/10/2024] [Accepted: 03/29/2024] [Indexed: 04/05/2024]
Abstract
Biting midges, notably those within the Ceratopogonidae family, have long been recognized for their epidemiological significance, both as nuisances and vectors for disease transmission in vertebrates. Despite their impact, genomic insights into these insects, particularly beyond the Culicoides genus, remain limited. In this study, we assembled the Forcipomyia taiwana (Shiraki) genome, comprising 113 scaffolds covering 130.4 Mbps-with the longest scaffold reaching 7.6 Mbps and an N50 value of 2.6 Mbps-marking a pivotal advancement in understanding the genetic architecture of ceratopogonid biting midges. Phylogenomic analyses reveal a shared ancestry between F. taiwana and Culicoides sonorensis Wirth & Jones, dating back approximately 124 million years, and highlight a dynamic history of gene family expansions and contractions within the Ceratopogonidae family. Notably, a substantial expansion of the odorant receptor (OR) gene family was observed, which is crucial for the chemosensory capabilities that govern biting midges' interactions with their environment, including host seeking and oviposition behaviors. The distribution of OR genes across the F. taiwana genome displays notable clusters on scaffolds, indicating localized tandem gene duplication events. Additionally, several collinear regions were identified, hinting at segmental duplications, inversions, and translocations, contributing to the olfactory system's evolutionary complexity. Among the 156 ORs identified in F. taiwana, 134 are biting midge-specific ORs, distributed across three distinct clades, each exhibiting unique motif features that distinguish them from the others. Through weighted gene co-expression network analysis, we correlated distinct gene modules with sex and reproductive status, laying the groundwork for future investigations into the interplay between gene expression and adaptive behaviors in F. taiwana. In conclusion, our study not only highlights the unique olfactory repertoire of ceratopogonid biting midges but also sets the stage for future studies into the genetic underpinnings of their unique biological traits and ecological strategies.
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Affiliation(s)
- Ming-Der Lin
- Department of Molecular Biology and Human Genetics, Tzu Chi University, 701 Zhongyang Rd., Sec. 3, Hualien, 97004, Taiwan; Institute of Medical Sciences, Tzu Chi University, 701 Zhongyang Rd., Sec. 3, Hualien, 97004, Taiwan.
| | - Chia-Hsien Chuang
- Department of Otolaryngology-Head and Neck Surgery, Lausanne University Hospital and University of Lausanne, Rue du Bugnon 46, 1011, Lausanne, Switzerland; Agora Cancer Research Centre, Rue du Bugnon 25A, 1011, Lausanne, Switzerland.
| | - Chih-Hsin Kao
- Institute of Information Science, Academia Sinica, 128 Academia Road, Sec. 2, Nankang, Taipei, 11529, Taiwan; Institute of Fisheries Science, National Taiwan University, No. 1, Sec. 4, Roosevelt Rd., Taipei, 10617, Taiwan.
| | - Shu-Hwa Chen
- TMU Research Center of Cancer Translational Medicine, Taipei Medical University, 250 Wu-Xing Street, Taipei, 11031, Taiwan.
| | - Szu-Chieh Wang
- Department of Molecular Biology and Human Genetics, Tzu Chi University, 701 Zhongyang Rd., Sec. 3, Hualien, 97004, Taiwan; Institute of Information Science, Academia Sinica, 128 Academia Road, Sec. 2, Nankang, Taipei, 11529, Taiwan.
| | - Ping-Heng Hsieh
- Institute of Information Science, Academia Sinica, 128 Academia Road, Sec. 2, Nankang, Taipei, 11529, Taiwan.
| | - Guan-Yu Chen
- Department of Molecular Biology and Human Genetics, Tzu Chi University, 701 Zhongyang Rd., Sec. 3, Hualien, 97004, Taiwan.
| | - Chun-Chia Mao
- Institute of Information Science, Academia Sinica, 128 Academia Road, Sec. 2, Nankang, Taipei, 11529, Taiwan; Institute of Fisheries Science, National Taiwan University, No. 1, Sec. 4, Roosevelt Rd., Taipei, 10617, Taiwan.
| | - Jeng-Yi Li
- Biodiversity Research Center, Academia Sinica, 128 Academia Road, Sec. 2, Nankang, Taipei, 11529, Taiwan.
| | - Mei-Yeh Jade Lu
- Biodiversity Research Center, Academia Sinica, 128 Academia Road, Sec. 2, Nankang, Taipei, 11529, Taiwan.
| | - Chung-Yen Lin
- Institute of Information Science, Academia Sinica, 128 Academia Road, Sec. 2, Nankang, Taipei, 11529, Taiwan; Institute of Fisheries Science, National Taiwan University, No. 1, Sec. 4, Roosevelt Rd., Taipei, 10617, Taiwan; Genome and Systems Biology Degree Program, National Taiwan University, No. 1, Sec. 4, Roosevelt Rd., Taipei, 10617, Taiwan.
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3
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Dikmen F, Dabak T, Özgişi BD, Özenirler Ç, Kuralay SC, Çay SB, Çınar YU, Obut O, Balcı MA, Akbaba P, Aksel EG, Zararsız G, Solares E, Eldem V. Transcriptome-wide analysis uncovers regulatory elements of the antennal transcriptome repertoire of bumblebee at different life stages. INSECT MOLECULAR BIOLOGY 2024. [PMID: 38676460 DOI: 10.1111/imb.12914] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/16/2024] [Accepted: 04/09/2024] [Indexed: 04/29/2024]
Abstract
Bumblebees are crucial pollinators, providing essential ecosystem services and global food production. The success of pollination services relies on the interaction between sensory organs and the environment. The antenna functions as a versatile multi-sensory organ, pivotal in mediating chemosensory/olfactory information, and governs adaptive responses to environmental changes. Despite an increasing number of RNA-sequencing studies on insect antenna, comprehensive antennal transcriptome studies at the different life stages were not elucidated systematically. Here, we quantified the expression profile and dynamics of coding/microRNA genes of larval head and antennal tissues from early- and late-stage pupa to the adult of Bombus terrestris as suitable model organism among pollinators. We further performed Pearson correlation analyses on the gene expression profiles of the antennal transcriptome from larval head tissue to adult stages, exploring both positive and negative expression trends. The positively correlated coding genes were primarily enriched in sensory perception of chemical stimuli, ion transport, transmembrane transport processes and olfactory receptor activity. Negatively correlated genes were mainly enriched in organic substance biosynthesis and regulatory mechanisms underlying larval body patterning and the formation of juvenile antennal structures. As post-transcriptional regulators, miR-1000-5p, miR-13b-3p, miR-263-5p and miR-252-5p showed positive correlations, whereas miR-315-5p, miR-92b-3p, miR-137-3p, miR-11-3p and miR-10-3p exhibited negative correlations in antennal tissue. Notably, based on the inverse expression relationship, positively and negatively correlated microRNA (miRNA)-mRNA target pairs revealed that differentially expressed miRNAs predictively targeted genes involved in antennal development, shaping antennal structures and regulating antenna-specific functions. Our data serve as a foundation for understanding stage-specific antennal transcriptomes and large-scale comparative analysis of transcriptomes in different insects.
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Affiliation(s)
- Fatih Dikmen
- Department of Biology, Istanbul University, İstanbul, Turkey
| | - Tunç Dabak
- Department of Biology, The Pennsylvania State University, State College, Pennsylvania, USA
| | | | | | | | | | | | - Onur Obut
- Department of Biology, Istanbul University, İstanbul, Turkey
| | | | - Pınar Akbaba
- Department of Biology, Istanbul University, İstanbul, Turkey
| | - Esma Gamze Aksel
- Faculty of Veterinary Medicine, Department of Genetics, Erciyes University, Kayseri, Turkey
| | - Gökmen Zararsız
- Department of Biostatistics, Erciyes University, Kayseri, Turkey
- Drug Application and Research Center (ERFARMA), Erciyes University, Kayseri, Turkey
| | - Edwin Solares
- Computer Science & Engineering Department, University of California, San Diego, California, USA
| | - Vahap Eldem
- Department of Biology, Istanbul University, İstanbul, Turkey
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4
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Ke H, Chen Y, Zhang B, Duan S, Ma X, Ren B, Wang Y. Odorant Receptors Expressing and Antennal Lobes Architecture Are Linked to Caste Dimorphism in Asian Honeybee, Apis cerana (Hymenoptera: Apidae). Int J Mol Sci 2024; 25:3934. [PMID: 38612745 PMCID: PMC11012130 DOI: 10.3390/ijms25073934] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2024] [Revised: 03/26/2024] [Accepted: 03/30/2024] [Indexed: 04/14/2024] Open
Abstract
Insects heavily rely on the olfactory system for food, mating, and predator evasion. However, the caste-related olfactory differences in Apis cerana, a eusocial insect, remain unclear. To explore the peripheral and primary center of the olfactory system link to the caste dimorphism in A. cerana, transcriptome and immunohistochemistry studies on the odorant receptors (ORs) and architecture of antennal lobes (ALs) were performed on different castes. Through transcriptomesis, we found more olfactory receptor genes in queens and workers than in drones, which were further validated by RT-qPCR, indicating caste dimorphism. Meanwhile, ALs structure, including volume, surface area, and the number of glomeruli, demonstrated a close association with caste dimorphism. Particularly, drones had more macroglomeruli possibly for pheromone recognition. Interestingly, we found that the number of ORs and glomeruli ratio was nearly 1:1. Also, the ORs expression distribution pattern was very similar to the distribution of glomeruli volume. Our results suggest the existence of concurrent plasticity in both the peripheral olfactory system and ALs among different castes of A. cerana, highlighting the role of the olfactory system in labor division in insects.
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Affiliation(s)
- Haoqin Ke
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, School of Life Science, Northeast Normal University, Changchun 130024, China; (H.K.); (Y.C.); (B.Z.); (S.D.); (X.M.); (B.R.)
- Key Laboratory of Vegetation Ecology, MOE, Northeast Normal University, Changchun 130024, China
| | - Yu Chen
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, School of Life Science, Northeast Normal University, Changchun 130024, China; (H.K.); (Y.C.); (B.Z.); (S.D.); (X.M.); (B.R.)
- Key Laboratory of Vegetation Ecology, MOE, Northeast Normal University, Changchun 130024, China
| | - Baoyi Zhang
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, School of Life Science, Northeast Normal University, Changchun 130024, China; (H.K.); (Y.C.); (B.Z.); (S.D.); (X.M.); (B.R.)
- Key Laboratory of Vegetation Ecology, MOE, Northeast Normal University, Changchun 130024, China
| | - Shiwen Duan
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, School of Life Science, Northeast Normal University, Changchun 130024, China; (H.K.); (Y.C.); (B.Z.); (S.D.); (X.M.); (B.R.)
- Key Laboratory of Vegetation Ecology, MOE, Northeast Normal University, Changchun 130024, China
| | - Xiaomei Ma
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, School of Life Science, Northeast Normal University, Changchun 130024, China; (H.K.); (Y.C.); (B.Z.); (S.D.); (X.M.); (B.R.)
- Key Laboratory of Vegetation Ecology, MOE, Northeast Normal University, Changchun 130024, China
| | - Bingzhong Ren
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, School of Life Science, Northeast Normal University, Changchun 130024, China; (H.K.); (Y.C.); (B.Z.); (S.D.); (X.M.); (B.R.)
- Key Laboratory of Vegetation Ecology, MOE, Northeast Normal University, Changchun 130024, China
| | - Yinliang Wang
- Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, School of Life Science, Northeast Normal University, Changchun 130024, China; (H.K.); (Y.C.); (B.Z.); (S.D.); (X.M.); (B.R.)
- Key Laboratory of Vegetation Ecology, MOE, Northeast Normal University, Changchun 130024, China
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5
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Couto A, Marty S, Dawson EH, d'Ettorre P, Sandoz JC, Montgomery SH. Evolution of the neuronal substrate for kin recognition in social Hymenoptera. Biol Rev Camb Philos Soc 2023; 98:2226-2242. [PMID: 37528574 DOI: 10.1111/brv.13003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2022] [Revised: 07/18/2023] [Accepted: 07/20/2023] [Indexed: 08/03/2023]
Abstract
In evolutionary terms, life is about reproduction. Yet, in some species, individuals forgo their own reproduction to support the reproductive efforts of others. Social insect colonies for example, can contain up to a million workers that actively cooperate in tasks such as foraging, brood care and nest defence, but do not produce offspring. In such societies the division of labour is pronounced, and reproduction is restricted to just one or a few individuals, most notably the queen(s). This extreme eusocial organisation exists in only a few mammals, crustaceans and insects, but strikingly, it evolved independently up to nine times in the order Hymenoptera (including ants, bees and wasps). Transitions from a solitary lifestyle to an organised society can occur through natural selection when helpers obtain a fitness benefit from cooperating with kin, owing to the indirect transmission of genes through siblings. However, this process, called kin selection, is vulnerable to parasitism and opportunistic behaviours from unrelated individuals. An ability to distinguish kin from non-kin, and to respond accordingly, could therefore critically facilitate the evolution of eusociality and the maintenance of non-reproductive workers. The question of how the hymenopteran brain has adapted to support this function is therefore a fundamental issue in evolutionary neuroethology. Early neuroanatomical investigations proposed that social Hymenoptera have expanded integrative brain areas due to selection for increased cognitive capabilities in the context of processing social information. Later studies challenged this assumption and instead pointed to an intimate link between higher social organisation and the existence of developed sensory structures involved in recognition and communication. In particular, chemical signalling of social identity, known to be mediated through cuticular hydrocarbons (CHCs), may have evolved hand in hand with a specialised chemosensory system in Hymenoptera. Here, we compile the current knowledge on this recognition system, from emitted identity signals, to the molecular and neuronal basis of chemical detection, with particular emphasis on its evolutionary history. Finally, we ask whether the evolution of social behaviour in Hymenoptera could have driven the expansion of their complex olfactory system, or whether the early origin and conservation of an olfactory subsystem dedicated to social recognition could explain the abundance of eusocial species in this insect order. Answering this question will require further comparative studies to provide a comprehensive view on lineage-specific adaptations in the olfactory pathway of Hymenoptera.
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Affiliation(s)
- Antoine Couto
- School of Biological Sciences, University of Bristol, 24 Tyndall Avenue, Bristol, BS8 1TQ, UK
- Evolution, Genomes, Behaviour and Ecology (UMR 9191), IDEEV, Université Paris-Saclay, CNRS, IRD, 12 route 128, Gif-sur-Yvette, 91190, France
| | - Simon Marty
- Evolution, Genomes, Behaviour and Ecology (UMR 9191), IDEEV, Université Paris-Saclay, CNRS, IRD, 12 route 128, Gif-sur-Yvette, 91190, France
| | - Erika H Dawson
- Laboratory of Experimental and Comparative Ethology, UR 4443 (LEEC), Université Sorbonne Paris Nord, 99 avenue J.-B. Clément, Villetaneuse, 93430, France
| | - Patrizia d'Ettorre
- Laboratory of Experimental and Comparative Ethology, UR 4443 (LEEC), Université Sorbonne Paris Nord, 99 avenue J.-B. Clément, Villetaneuse, 93430, France
- Institut Universitaire de France (IUF), 103 Boulevard Saint-Michel, Paris, 75005, France
| | - Jean-Christophe Sandoz
- Evolution, Genomes, Behaviour and Ecology (UMR 9191), IDEEV, Université Paris-Saclay, CNRS, IRD, 12 route 128, Gif-sur-Yvette, 91190, France
| | - Stephen H Montgomery
- School of Biological Sciences, University of Bristol, 24 Tyndall Avenue, Bristol, BS8 1TQ, UK
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6
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Vertacnik KL, Herrig DK, Godfrey RK, Hill T, Geib SM, Unckless RL, Nelson DR, Linnen CR. Evolution of five environmentally responsive gene families in a pine-feeding sawfly, Neodiprion lecontei (Hymenoptera: Diprionidae). Ecol Evol 2023; 13:e10506. [PMID: 37791292 PMCID: PMC10542623 DOI: 10.1002/ece3.10506] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2023] [Revised: 07/17/2023] [Accepted: 07/21/2023] [Indexed: 10/05/2023] Open
Abstract
A central goal in evolutionary biology is to determine the predictability of adaptive genetic changes. Despite many documented cases of convergent evolution at individual loci, little is known about the repeatability of gene family expansions and contractions. To address this void, we examined gene family evolution in the redheaded pine sawfly Neodiprion lecontei, a noneusocial hymenopteran and exemplar of a pine-specialized lineage evolved from angiosperm-feeding ancestors. After assembling and annotating a draft genome, we manually annotated multiple gene families with chemosensory, detoxification, or immunity functions before characterizing their genomic distributions and molecular evolution. We find evidence of recent expansions of bitter gustatory receptor, clan 3 cytochrome P450, olfactory receptor, and antimicrobial peptide subfamilies, with strong evidence of positive selection among paralogs in a clade of gustatory receptors possibly involved in the detection of bitter compounds. In contrast, these gene families had little evidence of recent contraction via pseudogenization. Overall, our results are consistent with the hypothesis that in response to novel selection pressures, gene families that mediate ecological interactions may expand and contract predictably. Testing this hypothesis will require the comparative analysis of high-quality annotation data from phylogenetically and ecologically diverse insect species and functionally diverse gene families. To this end, increasing sampling in under-sampled hymenopteran lineages and environmentally responsive gene families and standardizing manual annotation methods should be prioritized.
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Affiliation(s)
- Kim L. Vertacnik
- Department of EntomologyUniversity of KentuckyLexingtonKentuckyUSA
| | | | - R. Keating Godfrey
- McGuire Center for Lepidoptera and Biodiversity, University of FloridaGainesvilleFloridaUSA
| | - Tom Hill
- National Institute of Allergy and Infectious DiseasesBethesdaMarylandUSA
| | - Scott M. Geib
- Tropical Crop and Commodity Protection Research UnitUnited States Department of Agriculture: Agriculture Research Service Pacific Basin Agricultural Research CenterHiloHawaiiUSA
| | - Robert L. Unckless
- Department of Molecular BiosciencesUniversity of KansasLawrenceKansasUSA
| | - David R. Nelson
- Department of Microbiology, Immunology and BiochemistryUniversity of Tennessee Health Science CenterMemphisTennesseeUSA
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7
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Gomez Ramirez WC, Thomas NK, Muktar IJ, Riabinina O. The neuroecology of olfaction in bees. CURRENT OPINION IN INSECT SCIENCE 2023; 56:101018. [PMID: 36842606 DOI: 10.1016/j.cois.2023.101018] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2022] [Revised: 11/30/2022] [Accepted: 02/20/2023] [Indexed: 05/03/2023]
Abstract
The focus of bee neuroscience has for a long time been on only a handful of social honeybee and bumblebee species, out of thousands of bees species that have been described. On the other hand, information about the chemical ecology of bees is much more abundant. Here we attempted to compile the scarce information about olfactory systems of bees across species. We also review the major categories of intra- and inter-specific olfactory behaviors of bees, with specific focus on recent literature. We finish by discussing the most promising avenues for bee olfactory research in the near future.
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8
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Oi CA. Honeybee queen mandibular pheromone fails to regulate ovary activation in the common wasp. J Comp Physiol A Neuroethol Sens Neural Behav Physiol 2022; 208:297-302. [PMID: 35028724 DOI: 10.1007/s00359-021-01531-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2021] [Revised: 11/30/2021] [Accepted: 12/02/2021] [Indexed: 12/21/2022]
Abstract
The queen mandibular pheromone (QMP) identified from the honeybee is responsible for maintaining reproductive division of labour in the colony, and affects multiple behaviours. Interestingly, QMP inhibits reproduction not only in honeybee workers, but also in distantly related insect species such as fruit flies and bumblebees. This study examines whether QMP also affects worker reproduction in the common wasp Vespula vulgaris. Wasp workers were exposed to one of the following treatments: QMP, wasp queen pheromone (the hydrocarbon heptacosane n-C27), or acetone (solvent-only control). After dissecting the workers, no evidence that QMP inhibits development in V. vulgaris could be found. However, this study could confirm the inhibitory effect of the hydrocarbon heptacosane on ovary activation. The reason why non-social species such as the fruit fly and social species such as bumblebees and ants respond to the QMP, while the social wasp V. vulgaris does not, is unclear. The investigation of whether olfaction is key to sensing QMP in other insect species, and the detailed study of odorant receptors in other social insects, may provide insights into the mechanisms of response to this pheromone.
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Affiliation(s)
- Cintia Akemi Oi
- Laboratory of Socioecology and Social Evolution, KU Leuven, Leuven, Belgium.
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9
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Legan AW, Jernigan CM, Miller SE, Fuchs MF, Sheehan MJ. Expansion and Accelerated Evolution of 9-Exon Odorant Receptors in Polistes Paper Wasps. Mol Biol Evol 2021; 38:3832-3846. [PMID: 34151983 PMCID: PMC8383895 DOI: 10.1093/molbev/msab023] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022] Open
Abstract
Independent origins of sociality in bees and ants are associated with independent expansions of particular odorant receptor (OR) gene subfamilies. In ants, one clade within the OR gene family, the 9-exon subfamily, has dramatically expanded. These receptors detect cuticular hydrocarbons (CHCs), key social signaling molecules in insects. It is unclear to what extent 9-exon OR subfamily expansion is associated with the independent evolution of sociality across Hymenoptera, warranting studies of taxa with independently derived social behavior. Here, we describe OR gene family evolution in the northern paper wasp, Polistes fuscatus, and compare it to four additional paper wasp species spanning ∼40 million years of evolutionary divergence. We find 200 putatively functional OR genes in P. fuscatus, matching predictions from neuroanatomy, and more than half of these are in the 9-exon subfamily. Most OR gene expansions are tandemly arrayed at orthologous loci in Polistes genomes, and microsynteny analysis shows species-specific gain and loss of 9-exon ORs within tandem arrays. There is evidence of episodic positive diversifying selection shaping ORs in expanded subfamilies. Values of omega (dN/dS) are higher among 9-exon ORs compared to other OR subfamilies. Within the Polistes OR gene tree, branches in the 9-exon OR clade experience relaxed negative (relaxed purifying) selection relative to other branches in the tree. Patterns of OR evolution within Polistes are consistent with 9-exon OR function in CHC perception by combinatorial coding, with both natural selection and neutral drift contributing to interspecies differences in gene copy number and sequence.
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Affiliation(s)
- Andrew W Legan
- Laboratory for Animal Social Evolution and Recognition, Department of Neurobiology and Behavior, Cornell University, Ithaca, NY 14853, USA
| | - Christopher M Jernigan
- Laboratory for Animal Social Evolution and Recognition, Department of Neurobiology and Behavior, Cornell University, Ithaca, NY 14853, USA
| | - Sara E Miller
- Laboratory for Animal Social Evolution and Recognition, Department of Neurobiology and Behavior, Cornell University, Ithaca, NY 14853, USA
| | - Matthieu F Fuchs
- Laboratory for Animal Social Evolution and Recognition, Department of Neurobiology and Behavior, Cornell University, Ithaca, NY 14853, USA
| | - Michael J Sheehan
- Laboratory for Animal Social Evolution and Recognition, Department of Neurobiology and Behavior, Cornell University, Ithaca, NY 14853, USA
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10
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Obiero GF, Pauli T, Geuverink E, Veenendaal R, Niehuis O, Große-Wilde E. Chemoreceptor Diversity in Apoid Wasps and Its Reduction during the Evolution of the Pollen-Collecting Lifestyle of Bees (Hymenoptera: Apoidea). Genome Biol Evol 2021; 13:6117318. [PMID: 33484563 PMCID: PMC8011036 DOI: 10.1093/gbe/evaa269] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/22/2020] [Indexed: 12/15/2022] Open
Abstract
Chemoreceptors help insects to interact with their environment, to detect and assess food sources and oviposition sites, and to aid in intra- and interspecific communication. In Hymenoptera, species of eusocial lineages possess large chemoreceptor gene repertoires compared with solitary species, possibly because of their additional need to recognize nest-mates and caste. However, a critical piece of information missing so far has been the size of chemoreceptor gene repertoires of solitary apoid wasps. Apoid wasps are a paraphyletic group of almost exclusively solitary Hymenoptera phylogenetically positioned between ant and bee, both of which include eusocial species. We report the chemosensory-related gene repertoire sizes of three apoid wasps: Ampulex compressa, Cerceris arenaria, and Psenulus fuscipennis. We annotated genes encoding odorant (ORs), gustatory, and ionotropic receptors and chemosensory soluble proteins and odorant-binding proteins in transcriptomes of chemosensory tissues of the above three species and in early draft genomes of two species, A. compressa and C. arenaria. Our analyses revealed that apoid wasps possess larger OR repertoires than any bee lineage, that the last common ancestor of Apoidea possessed a considerably larger OR repertoire (∼160) than previously estimated (73), and that the expansion of OR genes in eusocial bees was less extensive than previously assumed. Intriguingly, the evolution of pollen-collecting behavior in the stem lineage of bees was associated with a notable loss of OR gene diversity. Thus, our results support the view that herbivorous Hymenoptera tend to possess smaller OR repertoires than carnivorous, parasitoid, or kleptoparasitic species.
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Affiliation(s)
- George F Obiero
- Department of Evolutionary Neuroethology, Max Planck Institute for Chemical Ecology, Jena, Germany.,School of Biological and Life Sciences, The Technical University of Kenya, Nairobi, Kenya
| | - Thomas Pauli
- Department of Evolutionary Biology and Ecology, Institute of Biology I (Zoology), Albert Ludwig University of Freiburg, Germany
| | - Elzemiek Geuverink
- Groningen Institute for Evolutionary Life Sciences, University of Groningen, The Netherlands
| | | | - Oliver Niehuis
- Department of Evolutionary Biology and Ecology, Institute of Biology I (Zoology), Albert Ludwig University of Freiburg, Germany
| | - Ewald Große-Wilde
- Department of Evolutionary Neuroethology, Max Planck Institute for Chemical Ecology, Jena, Germany.,EXTEMIT-K, Faculty of Forestry and Wood Sciences, Czech University of Life Sciences Prague, Praha-Suchdol, Czech Republic
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11
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Karpe SD, Tiwari V, Ramanathan S. InsectOR-Webserver for sensitive identification of insect olfactory receptor genes from non-model genomes. PLoS One 2021; 16:e0245324. [PMID: 33465132 PMCID: PMC7815150 DOI: 10.1371/journal.pone.0245324] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2020] [Accepted: 12/29/2020] [Indexed: 11/18/2022] Open
Abstract
Insect Olfactory Receptors (ORs) are diverse family of membrane protein receptors responsible for most of the insect olfactory perception and communication, and hence they are of utmost importance for developing repellents or pesticides. Accurate gene prediction of insect ORs from newly sequenced genomes is an important but challenging task. We have developed a dedicated webserver, 'insectOR', to predict and validate insect OR genes using multiple gene prediction algorithms, accompanied by relevant validations. It is possible to employ this server nearly automatically and perform rapid prediction of the OR gene loci from thousands of OR-protein-to-genome alignments, resolve gene boundaries for tandem OR genes and refine them further to provide more complete OR gene models. InsectOR outperformed the popular genome annotation pipelines (MAKER and NCBI eukaryotic genome annotation) in terms of overall sensitivity at base, exon and locus level, when tested on two distantly related insect genomes. It displayed more than 95% nucleotide level precision in both tests. Finally, given the same input data and parameters, InsectOR missed less than 2% gene loci, in contrast to 55% loci missed by MAKER for Drosophila melanogaster. The webserver is freely available on the web at http://caps.ncbs.res.in/insectOR/ and the basic package can be downloaded from https://github.com/sdk15/insectOR for local use. This tool will allow biologists to perform quick preliminary identification of insect olfactory receptor genes from newly sequenced genomes and also assist in their further detailed annotation. Its usage can also be extended to other divergent gene families.
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Affiliation(s)
- Snehal Dilip Karpe
- National Centre for Biological Sciences (NCBS), TIFR, Bengaluru, Karnataka, India
| | - Vikas Tiwari
- National Centre for Biological Sciences (NCBS), TIFR, Bengaluru, Karnataka, India
| | - Sowdhamini Ramanathan
- National Centre for Biological Sciences (NCBS), TIFR, Bengaluru, Karnataka, India
- * E-mail:
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12
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Chen H, Lahey Z, Talamas EJ, Johnson NF. Identification and expression of chemosensory receptor genes in the egg parasitoid Trissolcus basalis. COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS 2020; 37:100758. [PMID: 33202309 DOI: 10.1016/j.cbd.2020.100758] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/08/2020] [Revised: 10/29/2020] [Accepted: 10/29/2020] [Indexed: 11/17/2022]
Abstract
Parasitic wasps largely rely on chemosenses to locate resources. Understanding the evolution of their chemoreceptors can help elucidate the mechanisms underlying host adaptation and speciation. Trissolcus basalis is a biological control agent of the southern green stink bug, a pantropical pest, and is ideal for investigating the evolution of chemoreceptors. We identified 34 gustatory receptors, 170 odorant receptors, one odorant co-receptor, and 23 ionotropic receptors. Comparison with other Hymenoptera revealed species-specific expansions of 21 Grs and 53 Ors. Most of these Or expansions have 9 exons. Gender- and tissue-specific analyses showed that 5 Grs and 54 Ors are expressed only in antennae in both sexes, 66 Ors in female antennae only, and 4 Ors in male antennae alone. The identification and expression profile of chemosensory receptor genes in T. basalis helps in understanding the link between the evolution of chemoreceptors and speciation in parasitic wasps.
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Affiliation(s)
- Huayan Chen
- State Key Laboratory of Biocontrol, School of Life Sciences/School of Ecology, Sun Yat-sen University, Guangzhou 510275, China; Department of Entomology, The Ohio State University, 1315 Kinnear Road, Columbus, OH 43212, USA.
| | - Zachary Lahey
- Department of Evolution, Ecology and Organismal Biology, The Ohio State University, 1315 Kinnear Road, Columbus, OH 43212, USA.
| | - Elijah J Talamas
- Department of Entomology, The Ohio State University, 1315 Kinnear Road, Columbus, OH 43212, USA; Florida Department of Agriculture and Consumer Services, The Doyle Conner Building, 1911 SW 34th St, Gainesville, Florida 32608, USA.
| | - Norman F Johnson
- Department of Entomology, The Ohio State University, 1315 Kinnear Road, Columbus, OH 43212, USA; Department of Evolution, Ecology and Organismal Biology, The Ohio State University, 1315 Kinnear Road, Columbus, OH 43212, USA.
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13
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Polidori C, Jorge A, Ornosa C. Antennal morphology and sensillar equipment vary with pollen diet specialization in Andrena bees. ARTHROPOD STRUCTURE & DEVELOPMENT 2020; 57:100950. [PMID: 32413703 DOI: 10.1016/j.asd.2020.100950] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2020] [Revised: 04/19/2020] [Accepted: 04/22/2020] [Indexed: 06/11/2023]
Abstract
Several studies recently reported that specialized (oligolectic) bees, which collect pollen from few host plants, use, besides visual cues, specific volatiles to find their hosts. Generalist (polylectic) bees, on the other hand, likely have to recognize a wider range of volatiles because they forage on many plant species. Bee antennal sensory equipment may thus be under selection to optimize plant host recognition. This selection may have led to variation in sensory equipment morphology with diet specialization (lecty). We tested if lecty correlates with antennal morphology and abundance of the main olfactory/gustatory sensilla (sensilla trichoidea (ST), placoidea (SP), sensilla basiconica (SB)) in the genus Andrena (Hymenoptera: Andrenidae). Across 24 species, and after having controlled for body size, we found polylectic species to have a longer and narrower flagellomer F9 (the one with highest abundance of sensilla), and to have a greater ST density on F9, compared with oligolectic species. Neither SP density nor SB number varied with lecty. A cluster analysis furthermore depicted groups of species that reasonably reflect diet specialization. Our results are in line with the previously observed lower number of glomeruli in the brain of oligolectic, compared with polylectic, bees. A formal correction for phylogeny is necessary to confirm our preliminary conclusion that pollen diet specialization has driven the morphology of the peripheral sensory system in this bee genus.
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Affiliation(s)
- Carlo Polidori
- Instituto de Ciencias Ambientales (ICAM), Universidad de Castilla-La Mancha, Avenida Carlos III, s/n, E-45071, Toledo, Spain.
| | - Alberto Jorge
- Laboratorio de Sistemática Molecular, Museo Nacional de Ciencias Naturales (CSIC), C/ José Gutiérrez Abascal 2, E-28006, Madrid, Spain.
| | - Concepción Ornosa
- Departamento de Biodiversidad, Ecología y Evolución, Universidad Complutense de Madrid, C/ José Antonio Nováis, 12, E-28040, Madrid, Spain.
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Chepurwar S, Gupta A, Haddad R, Gupta N. Sequence-Based Prediction of Olfactory Receptor Responses. Chem Senses 2019; 44:693-703. [PMID: 31665762 DOI: 10.1093/chemse/bjz059] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Computational prediction of how strongly an olfactory receptor (OR) responds to various odors can help in bridging the widening gap between the large number of receptors that have been sequenced and the small number of experiments measuring their responses. Previous efforts in this area have predicted the responses of a receptor to some odors, using the known responses of the same receptor to other odors. Here, we present a method to predict the responses of a receptor without any known responses by using available data about the responses of other conspecific receptors and their sequences. We applied this method to ORs in insects Drosophila melanogaster (both adult and larva) and Anopheles gambiae and to mouse and human ORs. We found the predictions to be in significant agreement with the experimental measurements. The method also provides clues about the response-determining positions within the receptor sequences.
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Affiliation(s)
- Shashank Chepurwar
- Department of Biological Sciences and Bioengineering, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh, India
| | - Abhishek Gupta
- Department of Biological Sciences and Bioengineering, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh, India.,Department of Chemistry, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh, India
| | - Rafi Haddad
- The Gonda Multidisciplinary Brain Research Center, Bar-Ilan University, Ramat-Gan, Israel
| | - Nitin Gupta
- Department of Biological Sciences and Bioengineering, Indian Institute of Technology Kanpur, Kanpur, Uttar Pradesh, India
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Venthur H, Zhou JJ. Odorant Receptors and Odorant-Binding Proteins as Insect Pest Control Targets: A Comparative Analysis. Front Physiol 2018; 9:1163. [PMID: 30197600 PMCID: PMC6117247 DOI: 10.3389/fphys.2018.01163] [Citation(s) in RCA: 117] [Impact Index Per Article: 19.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2018] [Accepted: 08/03/2018] [Indexed: 01/09/2023] Open
Abstract
Recently, two alternative targets in insect periphery nerve system have been explored for environmentally-friendly approaches in insect pest management, namely odorant-binding proteins (OBPs) and odorant receptors (ORs). Located in insect antennae, OBPs are thought to be involved in the transport of odorants to ORs for the specific signal transduction of behaviorally active odorants. There is rich information on OBP binding affinity and molecular docking to bioactive compounds as well as ample 3D crystal structures due to feasible production of recombinant proteins. Although these provide excellent opportunities for them to be considered as pest control targets and a tool to design pest control agents, the debates on their binding specificity represent an obstacle. On the other hand, ORs have recently been functionally characterized with increasing evidence for their specificity, sensitivity and functional roles in pest behaviors. However, a major barrier to use ORs for semiochemical discovery is the lack of 3D crystal structures. Thus, OBPs and ORs have not been analyzed comparatively together so far for their feasibility as pest control targets. Here, we summarize the state of OBPs and ORs research in terms of its application in insect pest management. We discuss the suitability of both proteins as pest control targets and their selection toward the discovery of new potent semiochemicals. We argue that both proteins represent promising targets for pest control and can be used to identify new super-ligands likely present in nature and with reduced risk of resistance development than insect pesticides currently used in agriculture. We discuss that with the massive identification of OBPs through RNA-seq and improved binding affinity measurements, these proteins could be reconsidered as suitable targets for semiochemical discovery.
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Affiliation(s)
- Herbert Venthur
- Laboratorio de Química Ecológica, Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, Temuco, Chile.,Center of Excellence in Biotechnology Research Applied to the Environment (CIBAMA), Universidad de La Frontera, Temuco, Chile
| | - Jing-Jiang Zhou
- Department of Biological Chemistry and Crop Protection, Rothamsted Research, Harpenden, United Kingdom.,Jilin Provincial Key Laboratory of Animal Resource Conservation and Utilization, Northeast Normal University, Changchun, China
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